{"id":11377,"name":"odgi","description":"Optimized Dynamic Genome/Graph Implementation: understanding pangenome graphs","url":"https://github.com/pangenome/odgi","last_synced_at":"2025-09-04T21:17:37.240Z","repository":{"id":37030185,"uuid":"161278248","full_name":"pangenome/odgi","owner":"pangenome","description":"Optimized Dynamic Genome/Graph Implementation: understanding pangenome graphs","archived":false,"fork":false,"pushed_at":"2025-07-24T08:54:10.000Z","size":25948,"stargazers_count":219,"open_issues_count":60,"forks_count":44,"subscribers_count":12,"default_branch":"master","last_synced_at":"2025-09-03T21:51:37.262Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":"https://doi.org/10.1093/bioinformatics/btac308","language":"C++","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"mit","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/pangenome.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":"CITATION.cff","codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null}},"created_at":"2018-12-11T04:42:46.000Z","updated_at":"2025-08-14T07:40:04.000Z","dependencies_parsed_at":"2023-10-26T01:34:22.996Z","dependency_job_id":"d0b21c1f-cb79-4e7d-97f8-6da5433a4eae","html_url":"https://github.com/pangenome/odgi","commit_stats":null,"previous_names":[],"tags_count":27,"template":false,"template_full_name":null,"purl":"pkg:github/pangenome/odgi","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/pangenome","download_url":"https://codeload.github.com/pangenome/odgi/tar.gz/refs/heads/master","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":273577612,"owners_count":25130739,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-09-04T02:00:08.968Z","response_time":61,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"owner":{"login":"pangenome","name":"pangenome","uuid":"60657583","kind":"organization","description":"graphical pangenomic methods","email":null,"website":null,"location":null,"twitter":null,"company":null,"icon_url":"https://avatars.githubusercontent.com/u/60657583?v=4","repositories_count":18,"last_synced_at":"2023-03-04T01:25:15.302Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/pangenome","funding_links":[],"total_stars":null,"followers":null,"following":null,"created_at":"2022-11-14T07:37:51.083Z","updated_at":"2023-03-04T01:25:15.324Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/pangenome","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/pangenome/repositories"},"packages":[{"id":8184819,"name":"odgi","ecosystem":"spack","description":"Optimized dynamic genome/graph implementation. Odgi provides an\nefficient and succinct dynamic DNA sequence graph model, as well as a\nhost of algorithms that allow the use of such graphs in bioinformatic\nanalyses.\n","homepage":"https://github.com/pangenome/odgi","licenses":"[]","normalized_licenses":["Other"],"repository_url":"https://github.com/pangenome/odgi","keywords_array":[],"namespace":null,"versions_count":0,"first_release_published_at":null,"latest_release_published_at":"2025-09-03T21:53:32.144Z","latest_release_number":null,"last_synced_at":"2025-09-03T21:53:32.144Z","created_at":"2023-09-05T00:50:46.467Z","updated_at":"2025-09-04T08:43:27.932Z","registry_url":"https://packages.spack.io/package.html?name=odgi","install_command":"spack install odgi","documentation_url":null,"metadata":{},"repo_metadata":{"id":37030185,"uuid":"161278248","full_name":"pangenome/odgi","owner":"pangenome","description":"Optimized Dynamic Genome/Graph Implementation: understanding pangenome graphs","archived":false,"fork":false,"pushed_at":"2025-07-24T08:54:10.000Z","size":25948,"stargazers_count":219,"open_issues_count":60,"forks_count":44,"subscribers_count":12,"default_branch":"master","last_synced_at":"2025-09-03T21:51:37.262Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":"https://doi.org/10.1093/bioinformatics/btac308","language":"C++","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"mit","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/pangenome.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":"CITATION.cff","codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null}},"created_at":"2018-12-11T04:42:46.000Z","updated_at":"2025-08-14T07:40:04.000Z","dependencies_parsed_at":"2023-10-26T01:34:22.996Z","dependency_job_id":"d0b21c1f-cb79-4e7d-97f8-6da5433a4eae","html_url":"https://github.com/pangenome/odgi","commit_stats":null,"previous_names":[],"tags_count":27,"template":false,"template_full_name":null,"purl":"pkg:github/pangenome/odgi","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/pangenome","download_url":"https://codeload.github.com/pangenome/odgi/tar.gz/refs/heads/master","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":273577612,"owners_count":25130739,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-09-04T02:00:08.968Z","response_time":61,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"},"owner_record":{"login":"pangenome","name":"pangenome","uuid":"60657583","kind":"organization","description":"graphical pangenomic methods","email":null,"website":null,"location":null,"twitter":null,"company":null,"icon_url":"https://avatars.githubusercontent.com/u/60657583?v=4","repositories_count":18,"last_synced_at":"2023-03-04T01:25:15.302Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/pangenome","funding_links":[],"total_stars":null,"followers":null,"following":null,"created_at":"2022-11-14T07:37:51.083Z","updated_at":"2023-03-04T01:25:15.324Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/pangenome","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/pangenome/repositories"},"tags":[{"name":"v0.9.3","sha":"497d046cc78d2564331d79d09cc4194a88aa507c","kind":"commit","published_at":"2025-07-24T08:52:54.000Z","download_url":"https://codeload.github.com/pangenome/odgi/tar.gz/v0.9.3","html_url":"https://github.com/pangenome/odgi/releases/tag/v0.9.3","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/pangenome/odgi@v0.9.3","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/tags/v0.9.3","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/tags/v0.9.3/manifests"},{"name":"v0.9.2","sha":"be6a0202501d7ea2ac57f9ad89d4d10ed5dbd7c6","kind":"commit","published_at":"2025-04-23T02:30:02.000Z","download_url":"https://codeload.github.com/pangenome/odgi/tar.gz/v0.9.2","html_url":"https://github.com/pangenome/odgi/releases/tag/v0.9.2","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/pangenome/odgi@v0.9.2","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/tags/v0.9.2","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/tags/v0.9.2/manifests"},{"name":"v0.9.1","sha":"60afc5d3b62a9f7f234b05c5347750e43941e73d","kind":"commit","published_at":"2025-04-07T01:20:53.000Z","download_url":"https://codeload.github.com/pangenome/odgi/tar.gz/v0.9.1","html_url":"https://github.com/pangenome/odgi/releases/tag/v0.9.1","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/pangenome/odgi@v0.9.1","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/tags/v0.9.1","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/tags/v0.9.1/manifests"},{"name":"v0.9.0","sha":"1895f496d54ce68d62a34616a9c40de405f5656d","kind":"commit","published_at":"2024-09-18T15:05:59.000Z","download_url":"https://codeload.github.com/pangenome/odgi/tar.gz/v0.9.0","html_url":"https://github.com/pangenome/odgi/releases/tag/v0.9.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/pangenome/odgi@v0.9.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/tags/v0.9.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/tags/v0.9.0/manifests"},{"name":"v0.8.6","sha":"e647844f4042b85dc230a6a634e0eb38b1827e69","kind":"commit","published_at":"2024-04-07T22:51:42.000Z","download_url":"https://codeload.github.com/pangenome/odgi/tar.gz/v0.8.6","html_url":"https://github.com/pangenome/odgi/releases/tag/v0.8.6","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/pangenome/odgi@v0.8.6","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/tags/v0.8.6","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/tags/v0.8.6/manifests"},{"name":"v0.8.5","sha":"aa08eaedea8a6b684c8aef0a475e9e306a0bd3e5","kind":"commit","published_at":"2024-03-28T21:48:50.000Z","download_url":"https://codeload.github.com/pangenome/odgi/tar.gz/v0.8.5","html_url":"https://github.com/pangenome/odgi/releases/tag/v0.8.5","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/pangenome/odgi@v0.8.5","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/tags/v0.8.5","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/tags/v0.8.5/manifests"},{"name":"v0.8.4","sha":"3f59d596cff3bbe9ddff3862e3212812254496e5","kind":"commit","published_at":"2023-12-18T20:43:08.000Z","download_url":"https://codeload.github.com/pangenome/odgi/tar.gz/v0.8.4","html_url":"https://github.com/pangenome/odgi/releases/tag/v0.8.4","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/pangenome/odgi@v0.8.4","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/tags/v0.8.4","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/tags/v0.8.4/manifests"},{"name":"v0.8.3","sha":"34f006f31c3f6b35a1eb8d58a4edb1c458583de3","kind":"commit","published_at":"2023-04-19T14:30:40.000Z","download_url":"https://codeload.github.com/pangenome/odgi/tar.gz/v0.8.3","html_url":"https://github.com/pangenome/odgi/releases/tag/v0.8.3","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/pangenome/odgi@v0.8.3","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/tags/v0.8.3","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/tags/v0.8.3/manifests"},{"name":"v0.8.2","sha":"8715c555c9fd3710c11020259992ceb6eea020c3","kind":"commit","published_at":"2022-11-28T15:45:53.000Z","download_url":"https://codeload.github.com/pangenome/odgi/tar.gz/v0.8.2","html_url":"https://github.com/pangenome/odgi/releases/tag/v0.8.2","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/pangenome/odgi@v0.8.2","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/tags/v0.8.2","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/tags/v0.8.2/manifests"},{"name":"v0.8.1","sha":"98c139eb52ff3082e174837b58f9a94a38fdabd0","kind":"commit","published_at":"2022-10-21T14:28:37.000Z","download_url":"https://codeload.github.com/pangenome/odgi/tar.gz/v0.8.1","html_url":"https://github.com/pangenome/odgi/releases/tag/v0.8.1","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/pangenome/odgi@v0.8.1","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/tags/v0.8.1","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/tags/v0.8.1/manifests"},{"name":"v0.8.0","sha":"984aee9d2d0649cc73d0151de3c268ade2988958","kind":"commit","published_at":"2022-09-28T20:02:21.000Z","download_url":"https://codeload.github.com/pangenome/odgi/tar.gz/v0.8.0","html_url":"https://github.com/pangenome/odgi/releases/tag/v0.8.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/pangenome/odgi@v0.8.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/tags/v0.8.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/tags/v0.8.0/manifests"},{"name":"v0.7.3","sha":"7cf24a11476a559c9f473796b847881174273f97","kind":"commit","published_at":"2022-07-08T11:44:36.000Z","download_url":"https://codeload.github.com/pangenome/odgi/tar.gz/v0.7.3","html_url":"https://github.com/pangenome/odgi/releases/tag/v0.7.3","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/pangenome/odgi@v0.7.3","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/tags/v0.7.3","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/tags/v0.7.3/manifests"},{"name":"v0.7.2","sha":"d4de3c8479e3a41c92e47355a8da995642d99985","kind":"commit","published_at":"2022-05-24T12:29:09.000Z","download_url":"https://codeload.github.com/pangenome/odgi/tar.gz/v0.7.2","html_url":"https://github.com/pangenome/odgi/releases/tag/v0.7.2","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/pangenome/odgi@v0.7.2","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/tags/v0.7.2","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/tags/v0.7.2/manifests"},{"name":"v0.7.1","sha":"3c35bd94cc8a739a93bfa6a2d8ffbd278f49d964","kind":"commit","published_at":"2022-04-13T17:09:59.000Z","download_url":"https://codeload.github.com/pangenome/odgi/tar.gz/v0.7.1","html_url":"https://github.com/pangenome/odgi/releases/tag/v0.7.1","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/pangenome/odgi@v0.7.1","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/tags/v0.7.1","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/tags/v0.7.1/manifests"},{"name":"v0.7.0","sha":"f94c4048f1b1e32966604d8b499ee24e3dbadb73","kind":"commit","published_at":"2022-03-24T12:33:50.000Z","download_url":"https://codeload.github.com/pangenome/odgi/tar.gz/v0.7.0","html_url":"https://github.com/pangenome/odgi/releases/tag/v0.7.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/pangenome/odgi@v0.7.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/tags/v0.7.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/tags/v0.7.0/manifests"},{"name":"v0.6.3","sha":"606731865082d6b9f847154bf8dd02492aea63cd","kind":"commit","published_at":"2021-11-11T16:16:37.000Z","download_url":"https://codeload.github.com/pangenome/odgi/tar.gz/v0.6.3","html_url":"https://github.com/pangenome/odgi/releases/tag/v0.6.3","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/pangenome/odgi@v0.6.3","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/tags/v0.6.3","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/tags/v0.6.3/manifests"},{"name":"v0.6.2","sha":"c6f6ef444ed189ab9782ac85a9fc25764aef374f","kind":"commit","published_at":"2021-09-15T07:17:25.000Z","download_url":"https://codeload.github.com/pangenome/odgi/tar.gz/v0.6.2","html_url":"https://github.com/pangenome/odgi/releases/tag/v0.6.2","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/pangenome/odgi@v0.6.2","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/tags/v0.6.2","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/tags/v0.6.2/manifests"},{"name":"v0.6.1","sha":"b861f09e77f1b2d2f11124416331a8c72eec94f5","kind":"commit","published_at":"2021-09-04T11:03:09.000Z","download_url":"https://codeload.github.com/pangenome/odgi/tar.gz/v0.6.1","html_url":"https://github.com/pangenome/odgi/releases/tag/v0.6.1","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/pangenome/odgi@v0.6.1","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/tags/v0.6.1","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/tags/v0.6.1/manifests"},{"name":"0.6","sha":"82dabe9f8aaa382ed3e03bc685582ef640c41036","kind":"commit","published_at":"2021-06-15T13:36:22.000Z","download_url":"https://codeload.github.com/pangenome/odgi/tar.gz/0.6","html_url":"https://github.com/pangenome/odgi/releases/tag/0.6","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/pangenome/odgi@0.6","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/tags/0.6","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/tags/0.6/manifests"},{"name":"v0.6,0","sha":"82dabe9f8aaa382ed3e03bc685582ef640c41036","kind":"commit","published_at":"2021-06-15T13:36:22.000Z","download_url":"https://codeload.github.com/pangenome/odgi/tar.gz/v0.6,0","html_url":"https://github.com/pangenome/odgi/releases/tag/v0.6,0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/pangenome/odgi@v0.6%2C0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/tags/v0.6,0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/tags/v0.6,0/manifests"},{"name":"v0.5.1","sha":"4e646d3dec925c12ea029c9561ba60b5f952dcfc","kind":"commit","published_at":"2021-01-11T15:45:30.000Z","download_url":"https://codeload.github.com/pangenome/odgi/tar.gz/v0.5.1","html_url":"https://github.com/pangenome/odgi/releases/tag/v0.5.1","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/pangenome/odgi@v0.5.1","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/tags/v0.5.1","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/tags/v0.5.1/manifests"},{"name":"v0.5","sha":"a33c73ae1cab05e2d6fd395e73bd6a8f65a99ea2","kind":"commit","published_at":"2020-12-17T12:45:57.000Z","download_url":"https://codeload.github.com/pangenome/odgi/tar.gz/v0.5","html_url":"https://github.com/pangenome/odgi/releases/tag/v0.5","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/pangenome/odgi@v0.5","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/tags/v0.5","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/tags/v0.5/manifests"},{"name":"v0.4.1","sha":"e6c702c607ff839c1f228d4940a26869d804f92a","kind":"commit","published_at":"2020-04-26T06:15:10.000Z","download_url":"https://codeload.github.com/pangenome/odgi/tar.gz/v0.4.1","html_url":"https://github.com/pangenome/odgi/releases/tag/v0.4.1","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/pangenome/odgi@v0.4.1","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/tags/v0.4.1","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/tags/v0.4.1/manifests"},{"name":"v0.4","sha":"965174be736e76b6ab6b687925cefced1cb79f02","kind":"commit","published_at":"2020-04-25T15:25:18.000Z","download_url":"https://codeload.github.com/pangenome/odgi/tar.gz/v0.4","html_url":"https://github.com/pangenome/odgi/releases/tag/v0.4","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/pangenome/odgi@v0.4","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/tags/v0.4","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/tags/v0.4/manifests"},{"name":"v0.3","sha":"08bd24270d562df9b40f4ca27441b669c6c94770","kind":"commit","published_at":"2020-03-30T12:40:06.000Z","download_url":"https://codeload.github.com/pangenome/odgi/tar.gz/v0.3","html_url":"https://github.com/pangenome/odgi/releases/tag/v0.3","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/pangenome/odgi@v0.3","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/tags/v0.3","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/tags/v0.3/manifests"},{"name":"0.2","sha":"d4bef7578696de21f1a874ed7010897f72af63b8","kind":"commit","published_at":"2020-02-05T10:07:31.000Z","download_url":"https://codeload.github.com/pangenome/odgi/tar.gz/0.2","html_url":"https://github.com/pangenome/odgi/releases/tag/0.2","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/pangenome/odgi@0.2","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/tags/0.2","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/tags/0.2/manifests"},{"name":"v0.1","sha":"73969df3bcbe3f0d1a85f0c89cece773df8fc586","kind":"commit","published_at":"2019-10-29T13:48:15.000Z","download_url":"https://codeload.github.com/pangenome/odgi/tar.gz/v0.1","html_url":"https://github.com/pangenome/odgi/releases/tag/v0.1","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/pangenome/odgi@v0.1","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/tags/v0.1","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/tags/v0.1/manifests"}]},"repo_metadata_updated_at":"2025-09-04T08:43:27.932Z","dependent_packages_count":0,"downloads":null,"downloads_period":null,"dependent_repos_count":0,"rankings":{"downloads":null,"dependent_repos_count":0.0,"dependent_packages_count":57.925582663213845,"stargazers_count":16.066186282359222,"forks_count":17.427275153456097,"docker_downloads_count":null,"average":22.85476102475729},"purl":"pkg:spack/odgi","advisories":[],"docker_usage_url":"https://docker.ecosyste.ms/usage/spack/odgi","docker_dependents_count":null,"docker_downloads_count":null,"usage_url":"https://repos.ecosyste.ms/usage/spack/odgi","dependent_repositories_url":"https://repos.ecosyste.ms/api/v1/usage/spack/odgi/dependencies","status":null,"funding_links":[],"critical":null,"issue_metadata":{"last_synced_at":"2025-09-02T01:03:43.797Z","issues_count":57,"pull_requests_count":72,"avg_time_to_close_issue":3778756.5,"avg_time_to_close_pull_request":767133.015625,"issues_closed_count":26,"pull_requests_closed_count":64,"pull_request_authors_count":11,"issue_authors_count":46,"avg_comments_per_issue":3.7017543859649122,"avg_comments_per_pull_request":0.7638888888888888,"merged_pull_requests_count":62,"bot_issues_count":0,"bot_pull_requests_count":0,"past_year_issues_count":15,"past_year_pull_requests_count":16,"past_year_avg_time_to_close_issue":396973.0,"past_year_avg_time_to_close_pull_request":34165.4,"past_year_issues_closed_count":7,"past_year_pull_requests_closed_count":15,"past_year_pull_request_authors_count":4,"past_year_issue_authors_count":14,"past_year_avg_comments_per_issue":2.0,"past_year_avg_comments_per_pull_request":0.625,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":15,"issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/issues","maintainers":[{"login":"AndreaGuarracino","count":47,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/AndreaGuarracino"},{"login":"subwaystation","count":10,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/subwaystation"}],"active_maintainers":[{"login":"AndreaGuarracino","count":13,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/AndreaGuarracino"}]},"versions_url":"https://packages.ecosyste.ms/api/v1/registries/spack.io/packages/odgi/versions","version_numbers_url":"https://packages.ecosyste.ms/api/v1/registries/spack.io/packages/odgi/version_numbers","dependent_packages_url":"https://packages.ecosyste.ms/api/v1/registries/spack.io/packages/odgi/dependent_packages","related_packages_url":"https://packages.ecosyste.ms/api/v1/registries/spack.io/packages/odgi/related_packages","maintainers":[{"uuid":"EbiArnie","login":"EbiArnie","name":null,"email":null,"url":"https://github.com/EbiArnie","packages_count":245,"html_url":null,"role":null,"created_at":"2023-09-05T05:33:47.115Z","updated_at":"2023-09-05T05:33:47.115Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/spack.io/maintainers/EbiArnie/packages"},{"uuid":"tbhaxor","login":"tbhaxor","name":null,"email":null,"url":"https://github.com/tbhaxor","packages_count":2,"html_url":null,"role":null,"created_at":"2023-09-05T05:33:47.158Z","updated_at":"2023-09-05T05:33:47.158Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/spack.io/maintainers/tbhaxor/packages"}],"registry":{"name":"spack.io","url":"https://packages.spack.io","ecosystem":"spack","default":true,"packages_count":8771,"maintainers_count":926,"namespaces_count":0,"keywords_count":3681,"github":"spack","metadata":{"funded_packages_count":402},"icon_url":"https://github.com/spack.png","created_at":"2022-04-04T15:19:23.514Z","updated_at":"2025-09-04T07:04:55.751Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/spack.io/packages","maintainers_url":"https://packages.ecosyste.ms/api/v1/registries/spack.io/maintainers","namespaces_url":"https://packages.ecosyste.ms/api/v1/registries/spack.io/namespaces"}}],"commits":{"id":10895499,"full_name":"pangenome/odgi","default_branch":"master","committers":null,"total_commits":null,"total_committers":null,"total_bot_commits":null,"total_bot_committers":null,"mean_commits":null,"dds":null,"past_year_committers":null,"past_year_total_commits":null,"past_year_total_committers":null,"past_year_total_bot_commits":null,"past_year_total_bot_committers":null,"past_year_mean_commits":null,"past_year_dds":null,"last_synced_at":null,"last_synced_commit":null,"created_at":"2025-09-04T08:43:27.762Z","updated_at":"2025-09-04T08:43:27.762Z","commits_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/commits","host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-04T00:00:25.936Z","repositories_count":5480019,"commits_count":853389012,"contributors_count":31098138,"owners_count":906558,"icon_url":"https://github.com/github.png","host_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories"}},"issues_stats":{"full_name":"pangenome/odgi","html_url":"https://github.com/pangenome/odgi","last_synced_at":"2025-09-02T01:03:43.797Z","status":null,"issues_count":57,"pull_requests_count":72,"avg_time_to_close_issue":3778756.5,"avg_time_to_close_pull_request":767133.015625,"issues_closed_count":26,"pull_requests_closed_count":64,"pull_request_authors_count":11,"issue_authors_count":46,"avg_comments_per_issue":3.7017543859649122,"avg_comments_per_pull_request":0.7638888888888888,"merged_pull_requests_count":62,"bot_issues_count":0,"bot_pull_requests_count":0,"past_year_issues_count":15,"past_year_pull_requests_count":16,"past_year_avg_time_to_close_issue":396973.0,"past_year_avg_time_to_close_pull_request":34165.4,"past_year_issues_closed_count":7,"past_year_pull_requests_closed_count":15,"past_year_pull_request_authors_count":4,"past_year_issue_authors_count":14,"past_year_avg_comments_per_issue":2.0,"past_year_avg_comments_per_pull_request":0.625,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":15,"created_at":"2025-05-07T00:14:45.899Z","updated_at":"2025-09-03T02:30:44.389Z","repository_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi","issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/pangenome%2Fodgi/issues","issue_labels_count":{"help wanted":1},"pull_request_labels_count":{},"issue_author_associations_count":{"NONE":57,"MEMBER":2},"pull_request_author_associations_count":{"MEMBER":55,"CONTRIBUTOR":17,"NONE":4},"issue_authors":{"adadiehl":4,"sivico26":3,"zhangyixing3":3,"subwaystation":2,"yeeus":2,"gavinieong":2,"ASLeonard":2,"splaisan":2,"saswat-km":1,"hui-liu":1,"Shihab-Shahriar":1,"jikhashkya":1,"Jokendo-collab":1,"joehagmann":1,"bslbgg":1,"isabelladistefano":1,"ManuelTgn":1,"jonahcullen":1,"minglibio":1,"jwli-code":1,"LiaOb21":1,"SimonaSecomandi":1,"colindaven":1,"plnspineda":1,"MatteoSebastianelli":1,"jyj5558":1,"GeorgeBGM":1,"dirkjanvw":1,"zhangting1991":1,"ZiliaMR":1,"michael-olufemi":1,"MarionPerrier":1,"ScottMastro":1,"ld9866":1,"2benaszq":1,"Rktf":1,"gputzel":1,"atomemeteore":1,"buchanri":1,"cwatt":1,"cgroza":1,"LinuxPersonEC":1,"brettChapman":1,"jespindel01":1,"Catriona-Miller":1,"BaxW":1,"Overcraft90":1},"pull_request_authors":{"AndreaGuarracino":47,"subwaystation":8,"kojix2":4,"ekg":4,"Overcraft90":3,"tonyjie":2,"Shihab-Shahriar":2,"dpryan79":2,"JervenBolleman":2,"sampsyo":1,"kdm9":1},"host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-04T00:00:25.939Z","repositories_count":10080966,"issues_count":31268296,"pull_requests_count":96067200,"authors_count":10693694,"icon_url":"https://github.com/github.png","host_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories","owners_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/owners","authors_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors"},"past_year_issue_labels_count":{},"past_year_pull_request_labels_count":{},"past_year_issue_author_associations_count":{"NONE":15},"past_year_pull_request_author_associations_count":{"MEMBER":13,"CONTRIBUTOR":5,"NONE":2},"past_year_issue_authors":{"adadiehl":2,"2benaszq":1,"atomemeteore":1,"bslbgg":1,"buchanri":1,"cgroza":1,"colindaven":1,"jikhashkya":1,"Jokendo-collab":1,"Overcraft90":1,"plnspineda":1,"saswat-km":1,"Shihab-Shahriar":1,"zhangyixing3":1},"past_year_pull_request_authors":{"AndreaGuarracino":13,"Overcraft90":3,"Shihab-Shahriar":2,"tonyjie":2},"maintainers":[{"login":"AndreaGuarracino","count":47,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/AndreaGuarracino"},{"login":"subwaystation","count":10,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/subwaystation"}],"active_maintainers":[{"login":"AndreaGuarracino","count":13,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/AndreaGuarracino"}]},"events":{"total":{"CreateEvent":8,"IssuesEvent":22,"ReleaseEvent":3,"WatchEvent":16,"IssueCommentEvent":40,"PushEvent":19,"PullRequestEvent":18,"ForkEvent":5},"last_year":{"CreateEvent":8,"IssuesEvent":22,"ReleaseEvent":3,"WatchEvent":16,"IssueCommentEvent":40,"PushEvent":19,"PullRequestEvent":18,"ForkEvent":5}},"keywords":[],"dependencies":[{"ecosystem":"pypi","filepath":"docs/requirements.txt","sha":null,"kind":"manifest","created_at":"2022-06-29T10:31:17.616Z","updated_at":"2022-06-29T10:31:17.616Z","repository_link":"https://github.com/pangenome/odgi/blob/master/docs/requirements.txt","dependencies":[{"id":96344850,"package_name":"breathe","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":96344851,"package_name":"m2r2","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":96344852,"package_name":"asciidoc","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false}]},{"ecosystem":"actions","filepath":".github/workflows/build_and_test_on_push.yml","sha":null,"kind":"manifest","created_at":"2023-02-15T09:46:23.757Z","updated_at":"2023-02-15T09:46:23.757Z","repository_link":"https://github.com/pangenome/odgi/blob/master/.github/workflows/build_and_test_on_push.yml","dependencies":[{"id":7681853162,"package_name":"actions/checkout","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false}]},{"ecosystem":"actions","filepath":".github/workflows/publish_docker_hub.yml","sha":null,"kind":"manifest","created_at":"2023-02-15T09:46:23.856Z","updated_at":"2023-02-15T09:46:23.856Z","repository_link":"https://github.com/pangenome/odgi/blob/master/.github/workflows/publish_docker_hub.yml","dependencies":[{"id":7681854540,"package_name":"actions/checkout","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false}]},{"ecosystem":"docker","filepath":"Dockerfile","sha":null,"kind":"manifest","created_at":"2023-02-15T09:46:24.090Z","updated_at":"2023-02-15T09:46:24.090Z","repository_link":"https://github.com/pangenome/odgi/blob/master/Dockerfile","dependencies":[{"id":7681854691,"package_name":"debian","ecosystem":"docker","requirements":"bullseye-slim","direct":true,"kind":"build","optional":false}]}],"score":null,"created_at":"2025-09-04T15:50:37.816Z","updated_at":"2025-10-07T08:07:09.812Z","avatar_url":"https://github.com/pangenome.png","language":"C++","category":null,"sub_category":null,"monthly_downloads":0,"funding_links":[],"readme_doi_urls":["https://doi.org/10.1093/bioinformatics/btac308"],"works":{},"citation_counts":{},"total_citations":0,"keywords_from_contributors":[],"project_url":"https://science.ecosyste.ms/api/v1/projects/11377","html_url":"https://science.ecosyste.ms/projects/11377","bibtex_url":"https://science.ecosyste.ms/projects/11377/export.bibtex","apalike_url":"https://science.ecosyste.ms/projects/11377/export.apalike"}