{"id":122294,"name":null,"description":null,"url":"https://github.com/arjunrajlaboratory/imageanalysisproject","last_synced_at":"2025-09-09T09:04:30.368Z","repository":{"id":108089761,"uuid":"441961989","full_name":"arjunrajlaboratory/ImageAnalysisProject","owner":"arjunrajlaboratory","description":null,"archived":false,"fork":false,"pushed_at":"2025-08-15T13:37:46.000Z","size":791,"stargazers_count":0,"open_issues_count":0,"forks_count":1,"subscribers_count":2,"default_branch":"master","last_synced_at":"2025-08-15T15:40:10.097Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":null,"language":"Python","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":null,"status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/arjunrajlaboratory.png","metadata":{"files":{"readme":null,"changelog":null,"contributing":null,"funding":null,"license":null,"code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null}},"created_at":"2021-12-26T18:51:03.000Z","updated_at":"2025-08-15T13:37:50.000Z","dependencies_parsed_at":"2024-05-15T12:44:08.101Z","dependency_job_id":"9e6cdf3f-2720-4af5-a5eb-d708133fc028","html_url":"https://github.com/arjunrajlaboratory/ImageAnalysisProject","commit_stats":null,"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"purl":"pkg:github/arjunrajlaboratory/ImageAnalysisProject","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/arjunrajlaboratory%2FImageAnalysisProject","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/arjunrajlaboratory%2FImageAnalysisProject/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/arjunrajlaboratory%2FImageAnalysisProject/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/arjunrajlaboratory%2FImageAnalysisProject/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/arjunrajlaboratory","download_url":"https://codeload.github.com/arjunrajlaboratory/ImageAnalysisProject/tar.gz/refs/heads/master","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/arjunrajlaboratory%2FImageAnalysisProject/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":274270594,"owners_count":25253890,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-09-09T02:00:10.223Z","response_time":80,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"owner":{"login":"arjunrajlaboratory","name":"Arjun Raj's systems biology lab","uuid":"59969125","kind":"organization","description":"","email":null,"website":null,"location":null,"twitter":null,"company":null,"icon_url":"https://avatars.githubusercontent.com/u/59969125?v=4","repositories_count":40,"last_synced_at":"2024-04-22T20:25:28.979Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/arjunrajlaboratory","funding_links":[],"total_stars":18,"followers":4,"following":0,"created_at":"2023-03-04T19:27:50.981Z","updated_at":"2024-04-22T20:25:48.014Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/arjunrajlaboratory","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/arjunrajlaboratory/repositories"},"packages":[],"commits":{"id":8402442,"full_name":"arjunrajlaboratory/imageanalysisproject","default_branch":"master","committers":null,"total_commits":null,"total_committers":null,"total_bot_commits":null,"total_bot_committers":null,"mean_commits":null,"dds":null,"past_year_committers":null,"past_year_total_commits":null,"past_year_total_committers":null,"past_year_total_bot_commits":null,"past_year_total_bot_committers":null,"past_year_mean_commits":null,"past_year_dds":null,"last_synced_at":null,"last_synced_commit":null,"created_at":"2025-01-22T18:14:45.906Z","updated_at":"2025-01-22T18:14:45.906Z","commits_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories/arjunrajlaboratory%2Fimageanalysisproject/commits","host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-09T00:17:06.873Z","repositories_count":5511691,"commits_count":861302769,"contributors_count":31542681,"owners_count":915442,"icon_url":"https://github.com/github.png","host_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories"}},"issues_stats":{"full_name":"arjunrajlaboratory/ImageAnalysisProject","html_url":"https://github.com/arjunrajlaboratory/ImageAnalysisProject","last_synced_at":"2025-08-31T07:50:20.199Z","status":null,"issues_count":1,"pull_requests_count":129,"avg_time_to_close_issue":7.0,"avg_time_to_close_pull_request":90153.57851239669,"issues_closed_count":1,"pull_requests_closed_count":121,"pull_request_authors_count":2,"issue_authors_count":1,"avg_comments_per_issue":0.0,"avg_comments_per_pull_request":0.007751937984496124,"merged_pull_requests_count":121,"bot_issues_count":0,"bot_pull_requests_count":0,"past_year_issues_count":1,"past_year_pull_requests_count":115,"past_year_avg_time_to_close_issue":7.0,"past_year_avg_time_to_close_pull_request":25321.757009345794,"past_year_issues_closed_count":1,"past_year_pull_requests_closed_count":107,"past_year_pull_request_authors_count":1,"past_year_issue_authors_count":1,"past_year_avg_comments_per_issue":0.0,"past_year_avg_comments_per_pull_request":0.008695652173913044,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":107,"created_at":"2024-04-22T20:24:52.091Z","updated_at":"2025-09-03T06:08:47.045Z","repository_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/arjunrajlaboratory%2FImageAnalysisProject","issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/arjunrajlaboratory%2FImageAnalysisProject/issues","issue_labels_count":{},"pull_request_labels_count":{},"issue_author_associations_count":{"COLLABORATOR":1},"pull_request_author_associations_count":{"COLLABORATOR":168,"CONTRIBUTOR":4},"issue_authors":{"arjunrajlab":1},"pull_request_authors":{"arjunrajlab":168,"bruyeret":4},"host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-05T00:00:10.444Z","repositories_count":10100117,"issues_count":31473266,"pull_requests_count":97445500,"authors_count":10702683,"icon_url":"https://github.com/github.png","host_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories","owners_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/owners","authors_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors"},"past_year_issue_labels_count":{},"past_year_pull_request_labels_count":{},"past_year_issue_author_associations_count":{"COLLABORATOR":1},"past_year_pull_request_author_associations_count":{"COLLABORATOR":149},"past_year_issue_authors":{"arjunrajlab":1},"past_year_pull_request_authors":{"arjunrajlab":149},"maintainers":[{"login":"arjunrajlab","count":169,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/arjunrajlab"}],"active_maintainers":[{"login":"arjunrajlab","count":150,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/arjunrajlab"}]},"events":{"total":{"PushEvent":135,"PullRequestEvent":139,"CreateEvent":65},"last_year":{"PushEvent":135,"PullRequestEvent":139,"CreateEvent":65}},"keywords":[],"dependencies":[{"ecosystem":"docker","filepath":"workers/annotations/cellori_segmentation/Dockerfile","sha":null,"kind":"manifest","created_at":"2023-04-23T18:26:22.074Z","updated_at":"2023-04-23T18:26:22.074Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/annotations/cellori_segmentation/Dockerfile","dependencies":[{"id":9162506067,"package_name":"nvidia/cuda","ecosystem":"docker","requirements":"11.8.0-cudnn8-devel-ubuntu22.04","direct":true,"kind":"build","optional":false},{"id":9162506068,"package_name":"base","ecosystem":"docker","requirements":"latest","direct":true,"kind":"build","optional":false}]},{"ecosystem":"docker","filepath":"workers/annotations/cellpose/Dockerfile","sha":null,"kind":"manifest","created_at":"2023-04-23T18:26:22.109Z","updated_at":"2023-04-23T18:26:22.109Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/annotations/cellpose/Dockerfile","dependencies":[{"id":9162506116,"package_name":"nvidia/cuda","ecosystem":"docker","requirements":"11.8.0-cudnn8-devel-ubuntu22.04","direct":true,"kind":"build","optional":false},{"id":9162506117,"package_name":"base","ecosystem":"docker","requirements":"latest","direct":true,"kind":"build","optional":false}]},{"ecosystem":"docker","filepath":"workers/annotations/deepcell/Dockerfile","sha":null,"kind":"manifest","created_at":"2023-04-23T18:26:22.152Z","updated_at":"2023-04-23T18:26:22.152Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/annotations/deepcell/Dockerfile","dependencies":[{"id":9162506161,"package_name":"nvidia/cuda","ecosystem":"docker","requirements":"11.8.0-cudnn8-devel-ubuntu22.04","direct":true,"kind":"build","optional":false},{"id":9162506163,"package_name":"base","ecosystem":"docker","requirements":"latest","direct":true,"kind":"build","optional":false}]},{"ecosystem":"docker","filepath":"workers/properties/blobs/blob_point_count_worker/Dockerfile","sha":null,"kind":"manifest","created_at":"2023-04-23T18:26:22.369Z","updated_at":"2023-04-23T18:26:22.369Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/properties/blobs/blob_point_count_worker/Dockerfile","dependencies":[{"id":9162506344,"package_name":"ubuntu","ecosystem":"docker","requirements":"jammy","direct":true,"kind":"build","optional":false},{"id":9162506345,"package_name":"base","ecosystem":"docker","requirements":"latest","direct":true,"kind":"build","optional":false}]},{"ecosystem":"docker","filepath":"workers/properties/connections/children_count_worker/Dockerfile","sha":null,"kind":"manifest","created_at":"2023-04-23T18:26:22.420Z","updated_at":"2023-04-23T18:26:22.420Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/properties/connections/children_count_worker/Dockerfile","dependencies":[{"id":9162506353,"package_name":"ubuntu","ecosystem":"docker","requirements":"jammy","direct":true,"kind":"build","optional":false},{"id":9162506354,"package_name":"base","ecosystem":"docker","requirements":"latest","direct":true,"kind":"build","optional":false}]},{"ecosystem":"docker","filepath":"workers/properties/points/point_circle_intensity_mean_worker/Dockerfile","sha":null,"kind":"manifest","created_at":"2023-04-23T18:26:22.443Z","updated_at":"2023-04-23T18:26:22.443Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/properties/points/point_circle_intensity_mean_worker/Dockerfile","dependencies":[{"id":9162506359,"package_name":"ubuntu","ecosystem":"docker","requirements":"jammy","direct":true,"kind":"build","optional":false},{"id":9162506360,"package_name":"base","ecosystem":"docker","requirements":"latest","direct":true,"kind":"build","optional":false}]},{"ecosystem":"docker","filepath":"workers/properties/points/point_intensity_worker/Dockerfile","sha":null,"kind":"manifest","created_at":"2023-04-23T18:26:22.466Z","updated_at":"2023-04-23T18:26:22.466Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/properties/points/point_intensity_worker/Dockerfile","dependencies":[{"id":9162506385,"package_name":"ubuntu","ecosystem":"docker","requirements":"jammy","direct":true,"kind":"build","optional":false},{"id":9162506386,"package_name":"base","ecosystem":"docker","requirements":"latest","direct":true,"kind":"build","optional":false}]},{"ecosystem":"docker","filepath":"workers/properties/points/point_threshold_intensity_mean_worker/Dockerfile","sha":null,"kind":"manifest","created_at":"2023-04-23T18:26:22.493Z","updated_at":"2023-04-23T18:26:22.493Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/properties/points/point_threshold_intensity_mean_worker/Dockerfile","dependencies":[{"id":9162506397,"package_name":"ubuntu","ecosystem":"docker","requirements":"jammy","direct":true,"kind":"build","optional":false},{"id":9162506398,"package_name":"base","ecosystem":"docker","requirements":"latest","direct":true,"kind":"build","optional":false}]},{"ecosystem":"docker","filepath":"workers/test_worker/Dockerfile","sha":null,"kind":"manifest","created_at":"2023-04-23T18:26:22.516Z","updated_at":"2023-04-23T18:26:22.516Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/test_worker/Dockerfile","dependencies":[{"id":9162506415,"package_name":"ubuntu","ecosystem":"docker","requirements":"jammy","direct":true,"kind":"build","optional":false},{"id":9162506416,"package_name":"base","ecosystem":"docker","requirements":"latest","direct":true,"kind":"build","optional":false}]},{"ecosystem":"docker","filepath":"workers/annotations/annulus_generator_M1/Dockerfile","sha":null,"kind":"manifest","created_at":"2023-09-22T03:16:28.169Z","updated_at":"2023-09-22T03:16:28.169Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/annotations/annulus_generator_M1/Dockerfile","dependencies":[{"id":13864022351,"package_name":"ubuntu","ecosystem":"docker","requirements":"jammy","direct":true,"kind":"build","optional":false},{"id":13864022352,"package_name":"base","ecosystem":"docker","requirements":"latest","direct":true,"kind":"build","optional":false}]},{"ecosystem":"docker","filepath":"workers/annotations/connect_sequential/Dockerfile","sha":null,"kind":"manifest","created_at":"2023-09-22T03:16:28.178Z","updated_at":"2023-09-22T03:16:28.178Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/annotations/connect_sequential/Dockerfile","dependencies":[{"id":13864022353,"package_name":"ubuntu","ecosystem":"docker","requirements":"jammy","direct":true,"kind":"build","optional":false},{"id":13864022354,"package_name":"base","ecosystem":"docker","requirements":"latest","direct":true,"kind":"build","optional":false}]},{"ecosystem":"docker","filepath":"workers/annotations/connect_to_nearest/Dockerfile","sha":null,"kind":"manifest","created_at":"2023-09-22T03:16:28.184Z","updated_at":"2023-09-22T03:16:28.184Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/annotations/connect_to_nearest/Dockerfile","dependencies":[{"id":13864022355,"package_name":"ubuntu","ecosystem":"docker","requirements":"jammy","direct":true,"kind":"build","optional":false},{"id":13864022356,"package_name":"base","ecosystem":"docker","requirements":"latest","direct":true,"kind":"build","optional":false}]},{"ecosystem":"docker","filepath":"workers/annotations/random_point/Dockerfile","sha":null,"kind":"manifest","created_at":"2023-09-22T03:16:28.193Z","updated_at":"2023-09-22T03:16:28.193Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/annotations/random_point/Dockerfile","dependencies":[{"id":13864022357,"package_name":"$BASE_IMAGE","ecosystem":"docker","requirements":"latest","direct":true,"kind":"build","optional":false}]},{"ecosystem":"docker","filepath":"workers/annotations/random_point_annotation_M1/Dockerfile","sha":null,"kind":"manifest","created_at":"2023-09-22T03:16:28.199Z","updated_at":"2023-09-22T03:16:28.199Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/annotations/random_point_annotation_M1/Dockerfile","dependencies":[{"id":13864022358,"package_name":"ubuntu","ecosystem":"docker","requirements":"jammy","direct":true,"kind":"build","optional":false},{"id":13864022359,"package_name":"base","ecosystem":"docker","requirements":"latest","direct":true,"kind":"build","optional":false}]},{"ecosystem":"docker","filepath":"workers/annotations/random_square/Dockerfile","sha":null,"kind":"manifest","created_at":"2023-09-22T03:16:28.205Z","updated_at":"2023-09-22T03:16:28.205Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/annotations/random_square/Dockerfile","dependencies":[{"id":13864022360,"package_name":"$BASE_IMAGE","ecosystem":"docker","requirements":"latest","direct":true,"kind":"build","optional":false}]},{"ecosystem":"docker","filepath":"workers/annotations/test_multiple_annotation/Dockerfile","sha":null,"kind":"manifest","created_at":"2023-09-22T03:16:28.216Z","updated_at":"2023-09-22T03:16:28.216Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/annotations/test_multiple_annotation/Dockerfile","dependencies":[{"id":13864022361,"package_name":"ubuntu","ecosystem":"docker","requirements":"jammy","direct":true,"kind":"build","optional":false},{"id":13864022362,"package_name":"base","ecosystem":"docker","requirements":"latest","direct":true,"kind":"build","optional":false}]},{"ecosystem":"docker","filepath":"workers/annotations/test_multiple_annotation_M1/Dockerfile","sha":null,"kind":"manifest","created_at":"2023-09-22T03:16:28.223Z","updated_at":"2023-09-22T03:16:28.223Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/annotations/test_multiple_annotation_M1/Dockerfile","dependencies":[{"id":13864022363,"package_name":"ubuntu","ecosystem":"docker","requirements":"jammy","direct":true,"kind":"build","optional":false},{"id":13864022364,"package_name":"base","ecosystem":"docker","requirements":"latest","direct":true,"kind":"build","optional":false}]},{"ecosystem":"docker","filepath":"workers/base_docker_images/base_M1_image/Dockerfile","sha":null,"kind":"manifest","created_at":"2023-09-22T03:16:28.229Z","updated_at":"2023-09-22T03:16:28.229Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/base_docker_images/base_M1_image/Dockerfile","dependencies":[{"id":13864022365,"package_name":"ubuntu","ecosystem":"docker","requirements":"jammy","direct":true,"kind":"build","optional":false},{"id":13864022366,"package_name":"base","ecosystem":"docker","requirements":"latest","direct":true,"kind":"build","optional":false}]},{"ecosystem":"docker","filepath":"workers/base_docker_images/base_image/Dockerfile","sha":null,"kind":"manifest","created_at":"2023-09-22T03:16:28.236Z","updated_at":"2023-09-22T03:16:28.236Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/base_docker_images/base_image/Dockerfile","dependencies":[{"id":13864022367,"package_name":"ubuntu","ecosystem":"docker","requirements":"jammy","direct":true,"kind":"build","optional":false},{"id":13864022368,"package_name":"base","ecosystem":"docker","requirements":"latest","direct":true,"kind":"build","optional":false}]},{"ecosystem":"docker","filepath":"workers/base_docker_images/base_x86_image/Dockerfile","sha":null,"kind":"manifest","created_at":"2023-09-22T03:16:28.255Z","updated_at":"2023-09-22T03:16:28.255Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/base_docker_images/base_x86_image/Dockerfile","dependencies":[{"id":13864022369,"package_name":"ubuntu","ecosystem":"docker","requirements":"jammy","direct":true,"kind":"build","optional":false},{"id":13864022370,"package_name":"base","ecosystem":"docker","requirements":"latest","direct":true,"kind":"build","optional":false}]},{"ecosystem":"docker","filepath":"workers/base_docker_images/test_image/Dockerfile","sha":null,"kind":"manifest","created_at":"2023-09-22T03:16:28.276Z","updated_at":"2023-09-22T03:16:28.276Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/base_docker_images/test_image/Dockerfile","dependencies":[{"id":13864022378,"package_name":"ubuntu","ecosystem":"docker","requirements":"20.04","direct":true,"kind":"build","optional":false}]},{"ecosystem":"docker","filepath":"workers/properties/blobs/blob_annulus_intensity_worker/Dockerfile","sha":null,"kind":"manifest","created_at":"2023-09-22T03:16:28.291Z","updated_at":"2023-09-22T03:16:28.291Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/properties/blobs/blob_annulus_intensity_worker/Dockerfile","dependencies":[{"id":13864022382,"package_name":"ubuntu","ecosystem":"docker","requirements":"jammy","direct":true,"kind":"build","optional":false},{"id":13864022384,"package_name":"base","ecosystem":"docker","requirements":"latest","direct":true,"kind":"build","optional":false}]},{"ecosystem":"docker","filepath":"workers/properties/blobs/blob_intensity_worker/Dockerfile","sha":null,"kind":"manifest","created_at":"2023-09-22T03:16:28.960Z","updated_at":"2023-09-22T03:16:28.960Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/properties/blobs/blob_intensity_worker/Dockerfile","dependencies":[{"id":13864025338,"package_name":"ubuntu","ecosystem":"docker","requirements":"jammy","direct":true,"kind":"build","optional":false},{"id":13864025339,"package_name":"base","ecosystem":"docker","requirements":"latest","direct":true,"kind":"build","optional":false}]},{"ecosystem":"docker","filepath":"workers/properties/blobs/blob_metrics_worker/Dockerfile","sha":null,"kind":"manifest","created_at":"2023-09-22T03:16:29.830Z","updated_at":"2023-09-22T03:16:29.830Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/properties/blobs/blob_metrics_worker/Dockerfile","dependencies":[{"id":13864025349,"package_name":"ubuntu","ecosystem":"docker","requirements":"jammy","direct":true,"kind":"build","optional":false},{"id":13864025350,"package_name":"base","ecosystem":"docker","requirements":"latest","direct":true,"kind":"build","optional":false}]},{"ecosystem":"docker","filepath":"workers/properties/blobs/blob_point_count_3D_projection_worker/Dockerfile","sha":null,"kind":"manifest","created_at":"2023-09-22T03:16:29.920Z","updated_at":"2023-09-22T03:16:29.920Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/properties/blobs/blob_point_count_3D_projection_worker/Dockerfile","dependencies":[{"id":13864025368,"package_name":"ubuntu","ecosystem":"docker","requirements":"jammy","direct":true,"kind":"build","optional":false},{"id":13864025369,"package_name":"base","ecosystem":"docker","requirements":"latest","direct":true,"kind":"build","optional":false}]},{"ecosystem":"docker","filepath":"workers/properties/lines/line_length_worker/Dockerfile","sha":null,"kind":"manifest","created_at":"2023-09-22T03:16:29.939Z","updated_at":"2023-09-22T03:16:29.939Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/properties/lines/line_length_worker/Dockerfile","dependencies":[{"id":13864025372,"package_name":"$BASE_IMAGE","ecosystem":"docker","requirements":"latest","direct":true,"kind":"build","optional":false}]},{"ecosystem":"docker","filepath":"workers/properties/points/point_to_nearest_connected_point_distance/Dockerfile","sha":null,"kind":"manifest","created_at":"2023-09-22T03:16:30.054Z","updated_at":"2023-09-22T03:16:30.054Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/properties/points/point_to_nearest_connected_point_distance/Dockerfile","dependencies":[{"id":13864025373,"package_name":"$BASE_IMAGE","ecosystem":"docker","requirements":"latest","direct":true,"kind":"build","optional":false}]},{"ecosystem":"docker","filepath":"workers/properties/points/point_to_nearest_point_distance/Dockerfile","sha":null,"kind":"manifest","created_at":"2023-09-22T03:16:30.063Z","updated_at":"2023-09-22T03:16:30.063Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/properties/points/point_to_nearest_point_distance/Dockerfile","dependencies":[{"id":13864025374,"package_name":"$BASE_IMAGE","ecosystem":"docker","requirements":"latest","direct":true,"kind":"build","optional":false}]},{"ecosystem":"pypi","filepath":"annotation_utilities/requirements.txt","sha":null,"kind":"manifest","created_at":"2023-09-22T03:16:30.073Z","updated_at":"2023-09-22T03:16:30.073Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/annotation_utilities/requirements.txt","dependencies":[{"id":13864025375,"package_name":"girder-client","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false}]},{"ecosystem":"pypi","filepath":"annotation_utilities/setup.py","sha":null,"kind":"manifest","created_at":"2023-09-22T03:16:30.804Z","updated_at":"2023-09-22T03:16:30.804Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/annotation_utilities/setup.py","dependencies":[{"id":13864029392,"package_name":"shapely","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":13864029393,"package_name":"numba","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":13864029394,"package_name":"numpy","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false}]},{"ecosystem":"docker","filepath":"workers/properties/connections/parent_child_worker/Dockerfile","sha":null,"kind":"manifest","created_at":"2023-12-06T03:31:00.645Z","updated_at":"2023-12-06T03:31:00.645Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/properties/connections/parent_child_worker/Dockerfile","dependencies":[{"id":14928144820,"package_name":"ubuntu","ecosystem":"docker","requirements":"jammy","direct":true,"kind":"build","optional":false},{"id":14928144821,"package_name":"base","ecosystem":"docker","requirements":"latest","direct":true,"kind":"build","optional":false}]},{"ecosystem":"docker","filepath":"workers/properties/points/point_metrics_worker/Dockerfile","sha":null,"kind":"manifest","created_at":"2024-01-31T12:41:14.211Z","updated_at":"2024-01-31T12:41:14.211Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/properties/points/point_metrics_worker/Dockerfile","dependencies":[{"id":15941690321,"package_name":"ubuntu","ecosystem":"docker","requirements":"jammy","direct":true,"kind":"build","optional":false},{"id":15941690322,"package_name":"base","ecosystem":"docker","requirements":"latest","direct":true,"kind":"build","optional":false}]},{"ecosystem":"pypi","filepath":"worker_client/pyproject.toml","sha":null,"kind":"manifest","created_at":"2024-01-31T12:41:14.227Z","updated_at":"2024-01-31T12:41:14.227Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/worker_client/pyproject.toml","dependencies":[{"id":15941690323,"package_name":"numpy","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":15941690324,"package_name":"shapely","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false}]},{"ecosystem":"docker","filepath":"workers/properties/points/point_circle_intensity_worker/Dockerfile","sha":null,"kind":"manifest","created_at":"2024-02-12T03:41:55.030Z","updated_at":"2024-02-12T03:41:55.030Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/properties/points/point_circle_intensity_worker/Dockerfile","dependencies":[{"id":16176631721,"package_name":"ubuntu","ecosystem":"docker","requirements":"jammy","direct":true,"kind":"build","optional":false},{"id":16176631722,"package_name":"base","ecosystem":"docker","requirements":"latest","direct":true,"kind":"build","optional":false}]},{"ecosystem":"docker","filepath":"workers/properties/blobs/blob_annulus_intensity_percentile_worker/Dockerfile","sha":null,"kind":"manifest","created_at":"2024-04-20T11:33:28.599Z","updated_at":"2024-04-20T11:33:28.599Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/properties/blobs/blob_annulus_intensity_percentile_worker/Dockerfile","dependencies":[{"id":17550499777,"package_name":"ubuntu","ecosystem":"docker","requirements":"jammy","direct":true,"kind":"build","optional":false},{"id":17550499778,"package_name":"base","ecosystem":"docker","requirements":"latest","direct":true,"kind":"build","optional":false}]},{"ecosystem":"docker","filepath":"workers/properties/blobs/blob_intensity_percentile_worker/Dockerfile","sha":null,"kind":"manifest","created_at":"2024-04-20T11:33:29.186Z","updated_at":"2024-04-20T11:33:29.186Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/properties/blobs/blob_intensity_percentile_worker/Dockerfile","dependencies":[{"id":17550499793,"package_name":"ubuntu","ecosystem":"docker","requirements":"jammy","direct":true,"kind":"build","optional":false},{"id":17550499794,"package_name":"base","ecosystem":"docker","requirements":"latest","direct":true,"kind":"build","optional":false}]},{"ecosystem":"conda","filepath":"workers/annotations/annulus_generator_M1/environment.yml","sha":null,"kind":"manifest","created_at":"2024-05-15T12:43:33.797Z","updated_at":"2024-05-15T12:43:33.797Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/annotations/annulus_generator_M1/environment.yml","dependencies":[{"id":18082290476,"package_name":"imageio","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290477,"package_name":"pip","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290478,"package_name":"python","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290479,"package_name":"scikit-image","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290480,"package_name":"shapely","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false}]},{"ecosystem":"conda","filepath":"workers/annotations/connect_sequential/environment.yml","sha":null,"kind":"manifest","created_at":"2024-05-15T12:43:35.028Z","updated_at":"2024-05-15T12:43:35.028Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/annotations/connect_sequential/environment.yml","dependencies":[{"id":18082290481,"package_name":"geopandas","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290533,"package_name":"numpy","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290534,"package_name":"pandas","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290535,"package_name":"pip","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290536,"package_name":"python","ecosystem":"conda","requirements":"3.9.*","direct":true,"kind":"runtime","optional":false},{"id":18082290537,"package_name":"scipy","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290538,"package_name":"shapely","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false}]},{"ecosystem":"conda","filepath":"workers/annotations/connect_to_nearest/environment.yml","sha":null,"kind":"manifest","created_at":"2024-05-15T12:43:35.489Z","updated_at":"2024-05-15T12:43:35.489Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/annotations/connect_to_nearest/environment.yml","dependencies":[{"id":18082290539,"package_name":"geopandas","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290540,"package_name":"numpy","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290541,"package_name":"pandas","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290542,"package_name":"pip","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290543,"package_name":"python","ecosystem":"conda","requirements":"3.9.*","direct":true,"kind":"runtime","optional":false},{"id":18082290544,"package_name":"scipy","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290545,"package_name":"shapely","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false}]},{"ecosystem":"conda","filepath":"workers/annotations/random_point/environment.yml","sha":null,"kind":"manifest","created_at":"2024-05-15T12:43:35.509Z","updated_at":"2024-05-15T12:43:35.509Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/annotations/random_point/environment.yml","dependencies":[{"id":18082290550,"package_name":"imageio","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290551,"package_name":"pip","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290552,"package_name":"python","ecosystem":"conda","requirements":"3.10.*","direct":true,"kind":"runtime","optional":false},{"id":18082290553,"package_name":"scikit-image","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290554,"package_name":"shapely","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false}]},{"ecosystem":"conda","filepath":"workers/annotations/random_point_annotation_M1/environment.yml","sha":null,"kind":"manifest","created_at":"2024-05-15T12:43:35.518Z","updated_at":"2024-05-15T12:43:35.518Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/annotations/random_point_annotation_M1/environment.yml","dependencies":[{"id":18082290555,"package_name":"imageio","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290556,"package_name":"pip","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290557,"package_name":"python","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290558,"package_name":"scikit-image","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290559,"package_name":"shapely","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false}]},{"ecosystem":"conda","filepath":"workers/annotations/random_square/environment.yml","sha":null,"kind":"manifest","created_at":"2024-05-15T12:43:35.525Z","updated_at":"2024-05-15T12:43:35.525Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/annotations/random_square/environment.yml","dependencies":[{"id":18082290560,"package_name":"imageio","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290561,"package_name":"pip","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290562,"package_name":"python","ecosystem":"conda","requirements":"3.10.*","direct":true,"kind":"runtime","optional":false},{"id":18082290563,"package_name":"scikit-image","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290564,"package_name":"shapely","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false}]},{"ecosystem":"conda","filepath":"workers/annotations/test_multiple_annotation/environment.yml","sha":null,"kind":"manifest","created_at":"2024-05-15T12:43:35.531Z","updated_at":"2024-05-15T12:43:35.531Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/annotations/test_multiple_annotation/environment.yml","dependencies":[{"id":18082290565,"package_name":"imageio","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290566,"package_name":"pip","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290567,"package_name":"python","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290568,"package_name":"scikit-image","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290569,"package_name":"shapely","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false}]},{"ecosystem":"conda","filepath":"workers/annotations/test_multiple_annotation_M1/environment.yml","sha":null,"kind":"manifest","created_at":"2024-05-15T12:43:35.538Z","updated_at":"2024-05-15T12:43:35.538Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/annotations/test_multiple_annotation_M1/environment.yml","dependencies":[{"id":18082290570,"package_name":"imageio","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290571,"package_name":"pip","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290572,"package_name":"python","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290573,"package_name":"scikit-image","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290574,"package_name":"shapely","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false}]},{"ecosystem":"conda","filepath":"workers/base_docker_images/base_M1_image/environment.yml","sha":null,"kind":"manifest","created_at":"2024-05-15T12:43:35.546Z","updated_at":"2024-05-15T12:43:35.546Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/base_docker_images/base_M1_image/environment.yml","dependencies":[{"id":18082290575,"package_name":"chardet","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290581,"package_name":"imageio","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290582,"package_name":"numba","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290583,"package_name":"numpy","ecosystem":"conda","requirements":"1.24.*","direct":true,"kind":"runtime","optional":false},{"id":18082290584,"package_name":"pip","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290585,"package_name":"python","ecosystem":"conda","requirements":"3.10.*","direct":true,"kind":"runtime","optional":false},{"id":18082290586,"package_name":"rtree","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290587,"package_name":"shapely","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false}]},{"ecosystem":"conda","filepath":"workers/base_docker_images/base_x86_image/environment.yml","sha":null,"kind":"manifest","created_at":"2024-05-15T12:43:38.604Z","updated_at":"2024-05-15T12:43:38.604Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/base_docker_images/base_x86_image/environment.yml","dependencies":[{"id":18082290588,"package_name":"chardet","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290589,"package_name":"imageio","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290590,"package_name":"numba","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290591,"package_name":"numpy","ecosystem":"conda","requirements":"1.24.*","direct":true,"kind":"runtime","optional":false},{"id":18082290592,"package_name":"pip","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290593,"package_name":"python","ecosystem":"conda","requirements":"3.10.*","direct":true,"kind":"runtime","optional":false},{"id":18082290594,"package_name":"rtree","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290595,"package_name":"shapely","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false}]},{"ecosystem":"conda","filepath":"workers/properties/blobs/blob_annulus_intensity_worker/environment.yml","sha":null,"kind":"manifest","created_at":"2024-05-15T12:43:38.629Z","updated_at":"2024-05-15T12:43:38.629Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/properties/blobs/blob_annulus_intensity_worker/environment.yml","dependencies":[{"id":18082290596,"package_name":"imageio","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290597,"package_name":"opencv","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290598,"package_name":"pip","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290599,"package_name":"python","ecosystem":"conda","requirements":"3.11.*","direct":true,"kind":"runtime","optional":false},{"id":18082290600,"package_name":"scikit-image","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290601,"package_name":"shapely","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false}]},{"ecosystem":"conda","filepath":"workers/properties/blobs/blob_intensity_worker/environment.yml","sha":null,"kind":"manifest","created_at":"2024-05-15T12:43:38.651Z","updated_at":"2024-05-15T12:43:38.651Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/properties/blobs/blob_intensity_worker/environment.yml","dependencies":[{"id":18082290602,"package_name":"imageio","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290603,"package_name":"opencv","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290604,"package_name":"pip","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290605,"package_name":"python","ecosystem":"conda","requirements":"3.11.*","direct":true,"kind":"runtime","optional":false},{"id":18082290606,"package_name":"scikit-image","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290607,"package_name":"shapely","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false}]},{"ecosystem":"conda","filepath":"workers/properties/blobs/blob_metrics_worker/environment.yml","sha":null,"kind":"manifest","created_at":"2024-05-15T12:43:38.676Z","updated_at":"2024-05-15T12:43:38.676Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/properties/blobs/blob_metrics_worker/environment.yml","dependencies":[{"id":18082290608,"package_name":"imageio","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290609,"package_name":"opencv","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290610,"package_name":"pip","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290611,"package_name":"python","ecosystem":"conda","requirements":"3.11.*","direct":true,"kind":"runtime","optional":false},{"id":18082290612,"package_name":"shapely","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false}]},{"ecosystem":"conda","filepath":"workers/properties/blobs/blob_point_count_3D_projection_worker/environment.yml","sha":null,"kind":"manifest","created_at":"2024-05-15T12:43:38.685Z","updated_at":"2024-05-15T12:43:38.685Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/properties/blobs/blob_point_count_3D_projection_worker/environment.yml","dependencies":[{"id":18082290613,"package_name":"imageio","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290614,"package_name":"numba","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290615,"package_name":"pip","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290616,"package_name":"python","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290617,"package_name":"rtree","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290618,"package_name":"shapely","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false}]},{"ecosystem":"conda","filepath":"workers/properties/blobs/blob_point_count_worker/environment.yml","sha":null,"kind":"manifest","created_at":"2024-05-15T12:43:38.695Z","updated_at":"2024-05-15T12:43:38.695Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/properties/blobs/blob_point_count_worker/environment.yml","dependencies":[{"id":18082290619,"package_name":"imageio","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290620,"package_name":"numba","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290621,"package_name":"pip","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290622,"package_name":"python","ecosystem":"conda","requirements":"3.10.*","direct":true,"kind":"runtime","optional":false}]},{"ecosystem":"conda","filepath":"workers/properties/connections/children_count_worker/environment.yml","sha":null,"kind":"manifest","created_at":"2024-05-15T12:43:38.701Z","updated_at":"2024-05-15T12:43:38.701Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/properties/connections/children_count_worker/environment.yml","dependencies":[{"id":18082290623,"package_name":"numpy","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290624,"package_name":"pip","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290625,"package_name":"python","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false}]},{"ecosystem":"conda","filepath":"workers/properties/connections/parent_child_worker/environment.yml","sha":null,"kind":"manifest","created_at":"2024-05-15T12:43:38.707Z","updated_at":"2024-05-15T12:43:38.707Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/properties/connections/parent_child_worker/environment.yml","dependencies":[{"id":18082290626,"package_name":"pip","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290627,"package_name":"python","ecosystem":"conda","requirements":"3.11.*","direct":true,"kind":"runtime","optional":false}]},{"ecosystem":"conda","filepath":"workers/properties/lines/line_length_worker/environment.yml","sha":null,"kind":"manifest","created_at":"2024-05-15T12:43:38.713Z","updated_at":"2024-05-15T12:43:38.713Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/properties/lines/line_length_worker/environment.yml","dependencies":[{"id":18082290628,"package_name":"imageio","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290629,"package_name":"opencv","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290630,"package_name":"pip","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290631,"package_name":"python","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290632,"package_name":"shapely","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false}]},{"ecosystem":"conda","filepath":"workers/properties/points/point_circle_intensity_mean_worker/environment.yml","sha":null,"kind":"manifest","created_at":"2024-05-15T12:43:38.719Z","updated_at":"2024-05-15T12:43:38.719Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/properties/points/point_circle_intensity_mean_worker/environment.yml","dependencies":[{"id":18082290633,"package_name":"imageio","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290634,"package_name":"pip","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290635,"package_name":"python","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290636,"package_name":"scikit-image","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false}]},{"ecosystem":"conda","filepath":"workers/properties/points/point_circle_intensity_worker/environment.yml","sha":null,"kind":"manifest","created_at":"2024-05-15T12:43:38.725Z","updated_at":"2024-05-15T12:43:38.725Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/properties/points/point_circle_intensity_worker/environment.yml","dependencies":[{"id":18082290637,"package_name":"imageio","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290638,"package_name":"pip","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290639,"package_name":"python","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290640,"package_name":"scikit-image","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false}]},{"ecosystem":"conda","filepath":"workers/properties/points/point_intensity_worker/environment.yml","sha":null,"kind":"manifest","created_at":"2024-05-15T12:43:38.733Z","updated_at":"2024-05-15T12:43:38.733Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/properties/points/point_intensity_worker/environment.yml","dependencies":[{"id":18082290645,"package_name":"imageio","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290646,"package_name":"pip","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290647,"package_name":"python","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false}]},{"ecosystem":"conda","filepath":"workers/properties/points/point_metrics_worker/environment.yml","sha":null,"kind":"manifest","created_at":"2024-05-15T12:43:38.750Z","updated_at":"2024-05-15T12:43:38.750Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/properties/points/point_metrics_worker/environment.yml","dependencies":[{"id":18082290651,"package_name":"imageio","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290652,"package_name":"opencv","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290653,"package_name":"pip","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290654,"package_name":"python","ecosystem":"conda","requirements":"3.11.*","direct":true,"kind":"runtime","optional":false},{"id":18082290655,"package_name":"shapely","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false}]},{"ecosystem":"conda","filepath":"workers/properties/points/point_threshold_intensity_mean_worker/environment.yml","sha":null,"kind":"manifest","created_at":"2024-05-15T12:43:38.764Z","updated_at":"2024-05-15T12:43:38.764Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/properties/points/point_threshold_intensity_mean_worker/environment.yml","dependencies":[{"id":18082290656,"package_name":"imageio","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290657,"package_name":"pip","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290658,"package_name":"python","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290659,"package_name":"scikit-image","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false}]},{"ecosystem":"conda","filepath":"workers/properties/points/point_to_nearest_connected_point_distance/environment.yml","sha":null,"kind":"manifest","created_at":"2024-05-15T12:43:38.775Z","updated_at":"2024-05-15T12:43:38.775Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/properties/points/point_to_nearest_connected_point_distance/environment.yml","dependencies":[{"id":18082290660,"package_name":"imageio","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290661,"package_name":"opencv","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290662,"package_name":"pip","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290663,"package_name":"python","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290664,"package_name":"shapely","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false}]},{"ecosystem":"conda","filepath":"workers/properties/points/point_to_nearest_point_distance/environment.yml","sha":null,"kind":"manifest","created_at":"2024-05-15T12:43:38.782Z","updated_at":"2024-05-15T12:43:38.782Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/properties/points/point_to_nearest_point_distance/environment.yml","dependencies":[{"id":18082290665,"package_name":"imageio","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290666,"package_name":"opencv","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290667,"package_name":"pip","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290668,"package_name":"python","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290669,"package_name":"shapely","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false}]},{"ecosystem":"conda","filepath":"workers/test_worker/environment.yml","sha":null,"kind":"manifest","created_at":"2024-05-15T12:43:38.788Z","updated_at":"2024-05-15T12:43:38.788Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/test_worker/environment.yml","dependencies":[{"id":18082290670,"package_name":"imageio","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290671,"package_name":"pip","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":18082290672,"package_name":"python","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false}]},{"ecosystem":"docker","filepath":"workers/annotations/laplacian_of_gaussian/Dockerfile","sha":null,"kind":"manifest","created_at":"2024-05-15T12:43:38.802Z","updated_at":"2024-05-15T12:43:38.802Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/annotations/laplacian_of_gaussian/Dockerfile","dependencies":[{"id":18082290673,"package_name":"ubuntu","ecosystem":"docker","requirements":"jammy","direct":true,"kind":"build","optional":false},{"id":18082290674,"package_name":"base","ecosystem":"docker","requirements":"latest","direct":true,"kind":"build","optional":false}]},{"ecosystem":"docker","filepath":"workers/annotations/piscis/predict/Dockerfile","sha":null,"kind":"manifest","created_at":"2024-05-15T12:43:38.808Z","updated_at":"2024-05-15T12:43:38.808Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/annotations/piscis/predict/Dockerfile","dependencies":[{"id":18082290675,"package_name":"nvidia/cuda","ecosystem":"docker","requirements":"12.4.1-devel-ubuntu22.04","direct":true,"kind":"build","optional":false},{"id":18082290696,"package_name":"base","ecosystem":"docker","requirements":"latest","direct":true,"kind":"build","optional":false}]},{"ecosystem":"docker","filepath":"workers/annotations/piscis/train/Dockerfile","sha":null,"kind":"manifest","created_at":"2024-05-15T12:43:39.742Z","updated_at":"2024-05-15T12:43:39.742Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/annotations/piscis/train/Dockerfile","dependencies":[{"id":18082290697,"package_name":"nvidia/cuda","ecosystem":"docker","requirements":"12.4.1-devel-ubuntu22.04","direct":true,"kind":"build","optional":false},{"id":18082290698,"package_name":"base","ecosystem":"docker","requirements":"latest","direct":true,"kind":"build","optional":false}]},{"ecosystem":"pypi","filepath":"workers/annotations/cellori_segmentation/environment.yml","sha":null,"kind":"manifest","created_at":"2024-05-15T12:43:39.842Z","updated_at":"2024-05-15T12:43:39.842Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/annotations/cellori_segmentation/environment.yml","dependencies":[]},{"ecosystem":"pypi","filepath":"workers/annotations/cellpose/environment.yml","sha":null,"kind":"manifest","created_at":"2024-05-15T12:43:39.845Z","updated_at":"2024-05-15T12:43:39.845Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/annotations/cellpose/environment.yml","dependencies":[{"id":18082290699,"package_name":"cellpose","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":18082290700,"package_name":"deeptile","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false}]},{"ecosystem":"pypi","filepath":"workers/annotations/deepcell/environment.yml","sha":null,"kind":"manifest","created_at":"2024-05-15T12:43:41.063Z","updated_at":"2024-05-15T12:43:41.063Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/annotations/deepcell/environment.yml","dependencies":[{"id":18082290703,"package_name":"deepcell","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":18082290709,"package_name":"deeptile","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false}]},{"ecosystem":"pypi","filepath":"workers/annotations/laplacian_of_gaussian/environment.yml","sha":null,"kind":"manifest","created_at":"2024-05-15T12:43:42.961Z","updated_at":"2024-05-15T12:43:42.961Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/annotations/laplacian_of_gaussian/environment.yml","dependencies":[]},{"ecosystem":"pypi","filepath":"workers/annotations/piscis/environment.yml","sha":null,"kind":"manifest","created_at":"2024-05-15T12:43:43.836Z","updated_at":"2024-05-15T12:43:43.836Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/annotations/piscis/environment.yml","dependencies":[]},{"ecosystem":"pypi","filepath":"workers/properties/blobs/blob_annulus_intensity_percentile_worker/environment.yml","sha":null,"kind":"manifest","created_at":"2024-05-15T12:43:44.559Z","updated_at":"2024-05-15T12:43:44.559Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/properties/blobs/blob_annulus_intensity_percentile_worker/environment.yml","dependencies":[]},{"ecosystem":"pypi","filepath":"workers/properties/blobs/blob_intensity_percentile_worker/environment.yml","sha":null,"kind":"manifest","created_at":"2024-05-15T12:43:45.650Z","updated_at":"2024-05-15T12:43:45.650Z","repository_link":"https://github.com/arjunrajlaboratory/ImageAnalysisProject/blob/master/workers/properties/blobs/blob_intensity_percentile_worker/environment.yml","dependencies":[]}],"score":null,"created_at":"2025-09-08T23:14:43.364Z","updated_at":"2025-10-07T08:33:41.839Z","avatar_url":"https://github.com/arjunrajlaboratory.png","language":"Python","category":null,"sub_category":null,"monthly_downloads":0,"funding_links":[],"readme_doi_urls":[],"works":{},"citation_counts":{},"total_citations":0,"keywords_from_contributors":[],"project_url":"https://science.ecosyste.ms/api/v1/projects/122294","html_url":"https://science.ecosyste.ms/projects/122294"}