{"id":1231,"name":"CVtreeMLE","description":"CVtreeMLE: Efficient Estimation of Mixed Exposures using Data Adaptive Decision Trees and Cross-Validated Targeted Maximum Likelihood Estimation in R - Published in JOSS (2023)","url":"https://github.com/blind-contours/cvtreemle","last_synced_at":"2025-09-04T16:20:42.792Z","repository":{"id":37272606,"uuid":"427144514","full_name":"blind-contours/CVtreeMLE","owner":"blind-contours","description":":deciduous_tree: :dart: Cross Validated Decision Trees with Targeted Maximum Likelihood Estimation","archived":false,"fork":false,"pushed_at":"2024-06-18T02:02:09.000Z","size":133683,"stargazers_count":5,"open_issues_count":7,"forks_count":2,"subscribers_count":2,"default_branch":"main","last_synced_at":"2025-09-04T02:54:04.996Z","etag":null,"topics":["causal-effects","causal-inference","decision-trees","exposure-mixtures","machine-learning","robust-statistics","statistics","targeted-learning","variable-importance"],"latest_commit_sha":null,"homepage":"","language":"R","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"mit","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/blind-contours.png","metadata":{"files":{"readme":"README.Rmd","changelog":null,"contributing":"contributing.md","funding":null,"license":"LICENSE.md","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null}},"created_at":"2021-11-11T21:11:48.000Z","updated_at":"2024-07-16T07:40:22.000Z","dependencies_parsed_at":"2023-02-15T02:30:52.577Z","dependency_job_id":"8951691b-d08c-4385-8a34-a86452b7f710","html_url":"https://github.com/blind-contours/CVtreeMLE","commit_stats":null,"previous_names":[],"tags_count":1,"template":false,"template_full_name":null,"purl":"pkg:github/blind-contours/CVtreeMLE","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/blind-contours%2FCVtreeMLE","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/blind-contours%2FCVtreeMLE/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/blind-contours%2FCVtreeMLE/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/blind-contours%2FCVtreeMLE/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/blind-contours","download_url":"https://codeload.github.com/blind-contours/CVtreeMLE/tar.gz/refs/heads/main","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/blind-contours%2FCVtreeMLE/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":273598228,"owners_count":25134544,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-09-04T02:00:08.968Z","response_time":61,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"owner":{"login":"blind-contours","name":"David McCoy","uuid":"54640903","kind":"user","description":"","email":"","website":null,"location":null,"twitter":null,"company":null,"icon_url":"https://avatars.githubusercontent.com/u/54640903?u=3498bbee9867de787d0331d86ea085d3545e21cc\u0026v=4","repositories_count":3,"last_synced_at":"2023-03-04T16:20:30.957Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/blind-contours","funding_links":[],"total_stars":null,"followers":null,"following":null,"created_at":"2022-11-14T20:56:28.093Z","updated_at":"2023-03-04T16:20:30.965Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/blind-contours","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/blind-contours/repositories"},"packages":[],"commits":{"id":9625105,"full_name":"blind-contours/CVtreeMLE","default_branch":"main","committers":[{"name":"blind-contours","email":"david_mccoy@berkeley.edu","login":"blind-contours","count":256},{"name":"David Brenton McCoy","email":"david_mccoy@ln003.brc","login":null,"count":10},{"name":"David Brenton McCoy","email":"david_mccoy@ln001.brc","login":null,"count":5},{"name":"David Brenton McCoy","email":"david_mccoy@ln002.brc","login":null,"count":4}],"total_commits":275,"total_committers":4,"total_bot_commits":0,"total_bot_committers":0,"mean_commits":68.75,"dds":0.06909090909090909,"past_year_committers":[],"past_year_total_commits":0,"past_year_total_committers":0,"past_year_total_bot_commits":0,"past_year_total_bot_committers":0,"past_year_mean_commits":0.0,"past_year_dds":0.0,"last_synced_at":"2025-08-07T07:44:02.401Z","last_synced_commit":"3fa78102d87551a0ed07fb85ba65ac14a1dbfa49","created_at":"2025-04-11T11:07:34.039Z","updated_at":"2025-08-07T07:44:02.402Z","commits_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories/blind-contours%2FCVtreeMLE/commits","host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-08-22T00:00:16.844Z","repositories_count":5479765,"commits_count":853308191,"contributors_count":31095157,"owners_count":906558,"icon_url":"https://github.com/github.png","host_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories"}},"issues_stats":{"full_name":"blind-contours/CVtreeMLE","html_url":"https://github.com/blind-contours/CVtreeMLE","last_synced_at":"2025-08-31T20:43:28.548Z","status":"error","issues_count":31,"pull_requests_count":2,"avg_time_to_close_issue":11937084.375,"avg_time_to_close_pull_request":15.0,"issues_closed_count":24,"pull_requests_closed_count":2,"pull_request_authors_count":1,"issue_authors_count":5,"avg_comments_per_issue":1.967741935483871,"avg_comments_per_pull_request":1.0,"merged_pull_requests_count":2,"bot_issues_count":0,"bot_pull_requests_count":0,"past_year_issues_count":0,"past_year_pull_requests_count":0,"past_year_avg_time_to_close_issue":null,"past_year_avg_time_to_close_pull_request":null,"past_year_issues_closed_count":0,"past_year_pull_requests_closed_count":0,"past_year_pull_request_authors_count":0,"past_year_issue_authors_count":0,"past_year_avg_comments_per_issue":null,"past_year_avg_comments_per_pull_request":null,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":0,"created_at":"2025-04-11T11:07:34.291Z","updated_at":"2025-08-31T20:43:28.548Z","repository_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/blind-contours%2FCVtreeMLE","issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/blind-contours%2FCVtreeMLE/issues","issue_labels_count":{},"pull_request_labels_count":{},"issue_author_associations_count":{"NONE":28,"OWNER":3},"pull_request_author_associations_count":{"OWNER":2},"issue_authors":{"GaryBAYLOR":13,"wleoncio":5,"lightning-auriga":5,"osorensen":5,"blind-contours":3},"pull_request_authors":{"blind-contours":2},"host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-02T00:00:07.986Z","repositories_count":10042729,"issues_count":30645220,"pull_requests_count":91402388,"authors_count":10443886,"icon_url":"https://github.com/github.png","host_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories","owners_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/owners","authors_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors"},"past_year_issue_labels_count":{},"past_year_pull_request_labels_count":{},"past_year_issue_author_associations_count":{},"past_year_pull_request_author_associations_count":{},"past_year_issue_authors":{},"past_year_pull_request_authors":{},"maintainers":[{"login":"blind-contours","count":5,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/blind-contours"}],"active_maintainers":[]},"events":{"total":{"ForkEvent":1},"last_year":{"ForkEvent":1}},"keywords":["causal-effects","causal-inference","decision-trees","exposure-mixtures","machine-learning","robust-statistics","statistics","targeted-learning","variable-importance"],"dependencies":[{"ecosystem":"cran","filepath":"DESCRIPTION","sha":null,"kind":"manifest","created_at":"2022-08-02T01:20:05.561Z","updated_at":"2022-08-02T01:20:05.561Z","repository_link":"https://github.com/blind-contours/CVtreeMLE/blob/main/DESCRIPTION","dependencies":[{"id":538900993,"package_name":"R","ecosystem":"cran","requirements":"\u003e= 2.10","direct":true,"kind":"depends","optional":false},{"id":538900994,"package_name":"assertthat","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":538900995,"package_name":"cvTools","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":538900996,"package_name":"data.table","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":538900997,"package_name":"dplyr","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":538900998,"package_name":"foreach","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":538900999,"package_name":"future","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":538901000,"package_name":"Hmisc","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":538901001,"package_name":"magrittr","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":538901002,"package_name":"partykit","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":538901003,"package_name":"pre","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":538901004,"package_name":"purrr","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":538901005,"package_name":"rlang","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":538901006,"package_name":"sl3","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":538901007,"package_name":"stats","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":538901008,"package_name":"stringr","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":538901009,"package_name":"MASS","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":538901010,"package_name":"ggplot2","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":538901011,"package_name":"furrr","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":538901012,"package_name":"rmarkdown","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":538901013,"package_name":"knitr","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":538901014,"package_name":"testthat","ecosystem":"cran","requirements":"\u003e= 3.0.0","direct":true,"kind":"suggests","optional":false},{"id":538901015,"package_name":"xml2","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":538901016,"package_name":"mlbench","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":538901017,"package_name":"kableExtra","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":538901018,"package_name":"covr","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false}]},{"ecosystem":"actions","filepath":".github/workflows/R-CMD-check.yml","sha":null,"kind":"manifest","created_at":"2023-02-15T02:30:52.348Z","updated_at":"2023-02-15T02:30:52.348Z","repository_link":"https://github.com/blind-contours/CVtreeMLE/blob/main/.github/workflows/R-CMD-check.yml","dependencies":[{"id":7673898206,"package_name":"actions/checkout","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":7673898207,"package_name":"r-lib/actions/setup-r","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":7673898208,"package_name":"r-lib/actions/setup-pandoc","ecosystem":"actions","requirements":"v1","direct":true,"kind":"composite","optional":false},{"id":7673898209,"package_name":"r-lib/actions/setup-tinytex","ecosystem":"actions","requirements":"v1","direct":true,"kind":"composite","optional":false}]},{"ecosystem":"actions","filepath":".github/workflows/draft-pdf.yml","sha":null,"kind":"manifest","created_at":"2023-02-15T02:30:52.376Z","updated_at":"2023-02-15T02:30:52.376Z","repository_link":"https://github.com/blind-contours/CVtreeMLE/blob/main/.github/workflows/draft-pdf.yml","dependencies":[{"id":7673898278,"package_name":"actions/checkout","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":7673898281,"package_name":"openjournals/openjournals-draft-action","ecosystem":"actions","requirements":"master","direct":true,"kind":"composite","optional":false},{"id":7673898325,"package_name":"actions/upload-artifact","ecosystem":"actions","requirements":"v1","direct":true,"kind":"composite","optional":false}]},{"ecosystem":"actions","filepath":".github/workflows/lint.yaml","sha":null,"kind":"manifest","created_at":"2023-02-15T02:30:52.523Z","updated_at":"2023-02-15T02:30:52.523Z","repository_link":"https://github.com/blind-contours/CVtreeMLE/blob/main/.github/workflows/lint.yaml","dependencies":[{"id":7673899063,"package_name":"actions/checkout","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":7673899064,"package_name":"r-lib/actions/setup-r","ecosystem":"actions","requirements":"v1","direct":true,"kind":"composite","optional":false},{"id":7673899065,"package_name":"r-lib/actions/setup-r-dependencies","ecosystem":"actions","requirements":"v1","direct":true,"kind":"composite","optional":false}]}],"score":3.8712010109078907,"created_at":"2025-09-04T09:17:45.325Z","updated_at":"2025-10-07T08:04:30.969Z","avatar_url":"https://github.com/blind-contours.png","language":"R","category":"Scientific Software","sub_category":"Peer-reviewed","monthly_downloads":0,"funding_links":[],"readme_doi_urls":["https://doi.org/10.5281/zenodo.4070042","https://doi.org/10.21105/joss.02447","https://doi.org/10.21105/joss.04181"],"works":{},"citation_counts":{},"total_citations":0,"keywords_from_contributors":["interactions","mixed-exposure"],"project_url":"https://science.ecosyste.ms/api/v1/projects/1231","html_url":"https://science.ecosyste.ms/projects/1231"}