{"id":1234,"name":"PyView","description":"PyView: A general purpose tool for analyzing calcium imaging data - Published in JOSS (2023)","url":"https://github.com/galizia-lab/pyview","last_synced_at":"2025-09-04T16:20:37.924Z","repository":{"id":40318723,"uuid":"402365788","full_name":"galizia-lab/pyview","owner":"galizia-lab","description":"GUI + API for processing and visualizing Calcium imaging data.  Largely based on the IDL software \"VIEW\" developed by Giovanni Galizia. Implemented in Python by Ajayrama Kumaraswamy","archived":false,"fork":false,"pushed_at":"2025-08-13T12:18:18.000Z","size":50207,"stargazers_count":6,"open_issues_count":8,"forks_count":3,"subscribers_count":2,"default_branch":"master","last_synced_at":"2025-08-28T01:45:39.789Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":null,"language":"Jupyter Notebook","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"bsd-3-clause","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/galizia-lab.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE-BSD-3-CLAUSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null}},"created_at":"2021-09-02T09:38:23.000Z","updated_at":"2024-05-02T19:22:35.000Z","dependencies_parsed_at":"2025-05-14T04:03:42.046Z","dependency_job_id":"bbaa0882-a2fd-4841-a165-2b977602b12c","html_url":"https://github.com/galizia-lab/pyview","commit_stats":null,"previous_names":[],"tags_count":4,"template":false,"template_full_name":null,"purl":"pkg:github/galizia-lab/pyview","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/galizia-lab%2Fpyview","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/galizia-lab%2Fpyview/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/galizia-lab%2Fpyview/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/galizia-lab%2Fpyview/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/galizia-lab","download_url":"https://codeload.github.com/galizia-lab/pyview/tar.gz/refs/heads/master","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/galizia-lab%2Fpyview/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":273518726,"owners_count":25120030,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-09-03T02:00:09.631Z","response_time":76,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"owner":{"login":"galizia-lab","name":"Galizia Lab","uuid":"89973106","kind":"organization","description":"We research insect olfaction at the University of Konstanz, Germany","email":null,"website":"http://neuro.uni-konstanz.de/","location":"Germany","twitter":null,"company":null,"icon_url":"https://avatars.githubusercontent.com/u/89973106?v=4","repositories_count":1,"last_synced_at":"2023-03-10T00:55:26.066Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/galizia-lab","funding_links":[],"total_stars":null,"followers":null,"following":null,"created_at":"2022-11-19T17:06:21.798Z","updated_at":"2023-03-10T00:55:26.072Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/galizia-lab","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/galizia-lab/repositories"},"packages":[],"commits":{"id":9625107,"full_name":"galizia-lab/pyview","default_branch":"master","committers":[{"name":"Giovanni Galizia","email":"galizia@uni.kn","login":null,"count":34},{"name":"Ajayrama Kumaraswamy","email":"ajkumaraswamy@tutamail.com","login":"ajkswamy","count":28},{"name":"Ajayrama Kumaraswamy","email":"ajayrama.kumaraswamy@uni-konstanz.de","login":null,"count":2},{"name":"galizia","email":"galizia@uni-konstanz.de","login":"galizia","count":1}],"total_commits":65,"total_committers":4,"total_bot_commits":0,"total_bot_committers":0,"mean_commits":16.25,"dds":0.4769230769230769,"past_year_committers":[],"past_year_total_commits":0,"past_year_total_committers":0,"past_year_total_bot_commits":0,"past_year_total_bot_committers":0,"past_year_mean_commits":0.0,"past_year_dds":0.0,"last_synced_at":"2025-08-07T07:51:08.538Z","last_synced_commit":"7b872cd1cac3ead64d077e16c33e5f57a55546a2","created_at":"2025-04-11T11:07:41.843Z","updated_at":"2025-08-07T07:51:08.538Z","commits_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories/galizia-lab%2Fpyview/commits","host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-08-28T00:00:20.468Z","repositories_count":5479765,"commits_count":853309695,"contributors_count":31095220,"owners_count":906558,"icon_url":"https://github.com/github.png","host_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories"}},"issues_stats":{"full_name":"galizia-lab/pyview","html_url":"https://github.com/galizia-lab/pyview","last_synced_at":"2025-09-01T21:16:01.720Z","status":"active","issues_count":20,"pull_requests_count":22,"avg_time_to_close_issue":9776371.5,"avg_time_to_close_pull_request":665504.0,"issues_closed_count":14,"pull_requests_closed_count":19,"pull_request_authors_count":3,"issue_authors_count":5,"avg_comments_per_issue":1.25,"avg_comments_per_pull_request":0.22727272727272727,"merged_pull_requests_count":18,"bot_issues_count":0,"bot_pull_requests_count":0,"past_year_issues_count":1,"past_year_pull_requests_count":4,"past_year_avg_time_to_close_issue":null,"past_year_avg_time_to_close_pull_request":4896064.0,"past_year_issues_closed_count":0,"past_year_pull_requests_closed_count":1,"past_year_pull_request_authors_count":1,"past_year_issue_authors_count":1,"past_year_avg_comments_per_issue":0.0,"past_year_avg_comments_per_pull_request":0.25,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":1,"created_at":"2025-04-11T11:07:42.166Z","updated_at":"2025-09-01T21:16:01.721Z","repository_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/galizia-lab%2Fpyview","issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/galizia-lab%2Fpyview/issues","issue_labels_count":{},"pull_request_labels_count":{},"issue_author_associations_count":{"NONE":12,"CONTRIBUTOR":8},"pull_request_author_associations_count":{"CONTRIBUTOR":20,"NONE":1},"issue_authors":{"adamltyson":8,"galizia":5,"ajkswamy":3,"Yannan-Chen":3,"IngaPetelski":1},"pull_request_authors":{"ajkswamy":16,"galizia":4,"csoneson":1},"host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-02T00:00:07.986Z","repositories_count":10042729,"issues_count":30645220,"pull_requests_count":91402388,"authors_count":10443886,"icon_url":"https://github.com/github.png","host_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories","owners_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/owners","authors_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors"},"past_year_issue_labels_count":{},"past_year_pull_request_labels_count":{},"past_year_issue_author_associations_count":{"CONTRIBUTOR":1},"past_year_pull_request_author_associations_count":{"CONTRIBUTOR":3},"past_year_issue_authors":{"galizia":1},"past_year_pull_request_authors":{"ajkswamy":3},"maintainers":[],"active_maintainers":[]},"events":{"total":{"IssuesEvent":2,"DeleteEvent":1,"IssueCommentEvent":4,"PushEvent":4,"PullRequestEvent":2,"CreateEvent":2},"last_year":{"IssuesEvent":2,"DeleteEvent":1,"IssueCommentEvent":4,"PushEvent":5,"PullRequestEvent":2,"CreateEvent":2}},"keywords":[],"dependencies":[{"ecosystem":"pypi","filepath":"setup.py","sha":null,"kind":"manifest","created_at":"2022-08-09T17:10:48.744Z","updated_at":"2022-08-09T17:10:48.744Z","repository_link":"https://github.com/galizia-lab/pyview/blob/master/setup.py","dependencies":[{"id":933896240,"package_name":"pandas","ecosystem":"pypi","requirements":"\u003e=0.24.2","direct":true,"kind":"runtime","optional":false},{"id":933896244,"package_name":"openpyxl","ecosystem":"pypi","requirements":"\u003e=3.0.3","direct":true,"kind":"runtime","optional":false},{"id":933896246,"package_name":"scipy","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":933896248,"package_name":"numpy","ecosystem":"pypi","requirements":"\u003e=1.16.3","direct":true,"kind":"runtime","optional":false},{"id":933896250,"package_name":"matplotlib","ecosystem":"pypi","requirements":"\u003e=3.0.3","direct":true,"kind":"runtime","optional":false},{"id":933896252,"package_name":"pyyaml","ecosystem":"pypi","requirements":"\u003e=3.3","direct":true,"kind":"runtime","optional":false},{"id":933896254,"package_name":"Pillow","ecosystem":"pypi","requirements":"\u003e=6.0.0","direct":true,"kind":"runtime","optional":false},{"id":933896256,"package_name":"moviepy","ecosystem":"pypi","requirements":"\u003e=1.0.0","direct":true,"kind":"runtime","optional":false},{"id":933896257,"package_name":"scikit-image","ecosystem":"pypi","requirements":"\u003e=0.15.0","direct":true,"kind":"runtime","optional":false},{"id":933896259,"package_name":"appdirs","ecosystem":"pypi","requirements":"\u003e=1.4.3","direct":true,"kind":"runtime","optional":false},{"id":933896261,"package_name":"iltis","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":933896263,"package_name":"Source","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":933896265,"package_name":"See","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":933896267,"package_name":"tillvisionio","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":933896269,"package_name":"tifffile","ecosystem":"pypi","requirements":"\u003e=2019.7.26","direct":true,"kind":"runtime","optional":false},{"id":933896271,"package_name":"easygui","ecosystem":"pypi","requirements":"\u003e=0.98.1","direct":true,"kind":"runtime","optional":false},{"id":933896273,"package_name":"jinja2","ecosystem":"pypi","requirements":"\u003e=2.10.3","direct":true,"kind":"runtime","optional":false},{"id":933896275,"package_name":"whoosh","ecosystem":"pypi","requirements":"\u003e=2.7.4","direct":true,"kind":"runtime","optional":false},{"id":933896277,"package_name":"seaborn","ecosystem":"pypi","requirements":"\u003e=0.10.0","direct":true,"kind":"runtime","optional":false},{"id":933896279,"package_name":"bokeh","ecosystem":"pypi","requirements":"\u003e=2.0.0","direct":true,"kind":"runtime","optional":false},{"id":933896281,"package_name":"textfsm","ecosystem":"pypi","requirements":"\u003e=1.1.0","direct":true,"kind":"runtime","optional":false},{"id":933896283,"package_name":"itables","ecosystem":"pypi","requirements":"\u003e=0.2.1","direct":true,"kind":"runtime","optional":false},{"id":933896285,"package_name":"gekko","ecosystem":"pypi","requirements":"\u003e=0.2.8","direct":true,"kind":"runtime","optional":false},{"id":933896287,"package_name":"quantities","ecosystem":"pypi","requirements":"\u003e=0.12.4","direct":true,"kind":"runtime","optional":false},{"id":933896288,"package_name":"neo","ecosystem":"pypi","requirements":"\u003e=0.9.0","direct":true,"kind":"runtime","optional":false}]}],"score":4.025351690735149,"created_at":"2025-09-04T09:17:45.334Z","updated_at":"2025-10-07T08:04:30.987Z","avatar_url":"https://github.com/galizia-lab.png","language":"Jupyter Notebook","category":"Scientific Software","sub_category":"Peer-reviewed","monthly_downloads":0,"funding_links":[],"readme_doi_urls":["https://doi.org/10.21105/joss.04936"],"works":{},"citation_counts":{},"total_citations":0,"keywords_from_contributors":[],"project_url":"https://science.ecosyste.ms/api/v1/projects/1234","html_url":"https://science.ecosyste.ms/projects/1234"}