{"id":1304,"name":"InspectorCell","description":"InspectorCell: Finding Ground Truth in Multiplexed Microscopy Images - Published in JOSS (2022)","url":"https://gitlab.com/InspectorCell/inspectorcell","last_synced_at":"2025-09-04T16:22:45.273Z","repository":{"id":60860346,"uuid":"15417641","full_name":"InspectorCell/inspectorcell","owner":"InspectorCell","description":"InspectorCell provides an efficient workflow and graphical interface to generate high-quality training datasets from\r\nhighly multiplexed microscopy images.","archived":false,"fork":false,"pushed_at":null,"size":null,"stargazers_count":0,"open_issues_count":4,"forks_count":1,"subscribers_count":null,"default_branch":"main","last_synced_at":"2025-08-28T01:45:07.062Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":null,"language":null,"has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"apache-2.0","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://gitlab.com/uploads/-/system/project/avatar/15417641/ic_logo.png","metadata":{},"created_at":"2019-11-19T08:52:50.303Z","updated_at":"2022-12-27T10:34:33.196Z","dependencies_parsed_at":"2022-10-05T23:56:45.380Z","dependency_job_id":null,"html_url":"https://gitlab.com/InspectorCell/inspectorcell","commit_stats":null,"previous_names":[],"tags_count":20,"template":null,"template_full_name":null,"purl":"pkg:gitlab/InspectorCell/inspectorcell","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/gitlab.com/repositories/InspectorCell%2Finspectorcell","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/gitlab.com/repositories/InspectorCell%2Finspectorcell/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/gitlab.com/repositories/InspectorCell%2Finspectorcell/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/gitlab.com/repositories/InspectorCell%2Finspectorcell/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/gitlab.com/owners/InspectorCell","download_url":"https://gitlab.com/InspectorCell/inspectorcell/-/archive/main/inspectorcell-main.zip","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/gitlab.com/repositories/InspectorCell%2Finspectorcell/sbom","scorecard":null,"host":{"name":"gitlab.com","url":"https://gitlab.com","kind":"gitlab","repositories_count":4520319,"owners_count":7143,"icon_url":"https://github.com/gitlab.png","version":null,"created_at":"2022-05-30T11:31:42.605Z","updated_at":"2024-07-18T11:24:13.055Z","status":"online","status_checked_at":"2025-09-03T02:00:09.937Z","response_time":276,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.382Z","robots_txt_url":"https://gitlab.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/gitlab.com","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/gitlab.com/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/gitlab.com/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/gitlab.com/owners"}},"owner":null,"packages":[],"commits":{"id":9631982,"full_name":"InspectorCell/inspectorcell","default_branch":"main","committers":[{"name":"andreg","email":"andre.gosselink@posteo.de","login":null,"count":65},{"name":"andreg","email":"andreg@miltenyibiotec.de","login":null,"count":47},{"name":"rikisa","email":"andre.gosselink@miltenyibiotec.de","login":null,"count":7},{"name":"InspectorCell","email":"bioinformatics@miltenyibiotec.de","login":null,"count":4},{"name":"andreg","email":"andreg@miltenyi.com","login":null,"count":2},{"name":"Wouter-Michiel Vierdag","email":"wouterv@miltenyibiotec.de","login":null,"count":1}],"total_commits":126,"total_committers":6,"total_bot_commits":0,"total_bot_committers":0,"mean_commits":21.0,"dds":0.4841269841269841,"past_year_committers":[],"past_year_total_commits":0,"past_year_total_committers":0,"past_year_total_bot_commits":0,"past_year_total_bot_committers":0,"past_year_mean_commits":0.0,"past_year_dds":0.0,"last_synced_at":"2025-09-02T22:48:22.047Z","last_synced_commit":"575a730b430ed0b63d287bc2b59e07b05e75605c","created_at":"2025-04-11T20:25:40.795Z","updated_at":"2025-09-02T22:48:22.047Z","commits_url":"https://commits.ecosyste.ms/api/v1/hosts/gitlab.com/repositories/InspectorCell%2Finspectorcell/commits","host":{"name":"gitlab.com","url":"https://gitlab.com","kind":"gitlab","last_synced_at":"2025-09-03T00:00:08.304Z","repositories_count":17142,"commits_count":5233877,"contributors_count":162602,"owners_count":8876,"icon_url":"https://github.com/gitlab.png","host_url":"https://commits.ecosyste.ms/api/v1/hosts/gitlab.com","repositories_url":"https://commits.ecosyste.ms/api/v1/hosts/gitlab.com/repositories"}},"issues_stats":{"full_name":"InspectorCell/inspectorcell","html_url":"https://gitlab.com/InspectorCell/inspectorcell","last_synced_at":"2025-09-04T15:55:35.848Z","status":"error","issues_count":null,"pull_requests_count":null,"avg_time_to_close_issue":null,"avg_time_to_close_pull_request":null,"issues_closed_count":null,"pull_requests_closed_count":null,"pull_request_authors_count":null,"issue_authors_count":null,"avg_comments_per_issue":null,"avg_comments_per_pull_request":null,"merged_pull_requests_count":null,"bot_issues_count":null,"bot_pull_requests_count":null,"past_year_issues_count":null,"past_year_pull_requests_count":null,"past_year_avg_time_to_close_issue":null,"past_year_avg_time_to_close_pull_request":null,"past_year_issues_closed_count":null,"past_year_pull_requests_closed_count":null,"past_year_pull_request_authors_count":null,"past_year_issue_authors_count":null,"past_year_avg_comments_per_issue":null,"past_year_avg_comments_per_pull_request":null,"past_year_bot_issues_count":null,"past_year_bot_pull_requests_count":null,"past_year_merged_pull_requests_count":null,"created_at":"2025-04-11T11:09:21.756Z","updated_at":"2025-09-04T15:55:35.849Z","repository_url":"https://issues.ecosyste.ms/api/v1/hosts/gitlab.com/repositories/InspectorCell%2Finspectorcell","issues_url":"https://issues.ecosyste.ms/api/v1/hosts/gitlab.com/repositories/InspectorCell%2Finspectorcell/issues","issue_labels_count":{},"pull_request_labels_count":{},"issue_author_associations_count":{},"pull_request_author_associations_count":{},"issue_authors":{},"pull_request_authors":{},"host":{"name":"gitlab.com","url":"https://gitlab.com","kind":"gitlab","last_synced_at":"2025-09-04T00:00:25.956Z","repositories_count":570,"issues_count":785,"pull_requests_count":876,"authors_count":61892,"icon_url":"https://github.com/gitlab.png","host_url":"https://issues.ecosyste.ms/api/v1/hosts/gitlab.com","repositories_url":"https://issues.ecosyste.ms/api/v1/hosts/gitlab.com/repositories","owners_url":"https://issues.ecosyste.ms/api/v1/hosts/gitlab.com/owners","authors_url":"https://issues.ecosyste.ms/api/v1/hosts/gitlab.com/authors"},"past_year_issue_labels_count":{},"past_year_pull_request_labels_count":{},"past_year_issue_author_associations_count":{},"past_year_pull_request_author_associations_count":{},"past_year_issue_authors":{},"past_year_pull_request_authors":{},"maintainers":[],"active_maintainers":[]},"events":null,"keywords":[],"dependencies":[{"ecosystem":"pypi","filepath":"doc/requirements.txt","sha":null,"kind":"manifest","created_at":"2022-10-05T23:56:44.074Z","updated_at":"2022-10-05T23:56:44.074Z","repository_link":"https://gitlab.com/InspectorCell/inspectorcell/blob/main/doc/requirements.txt","dependencies":[{"id":6279951599,"package_name":"PyQt5","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":6279951600,"package_name":"pyqtgraph","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":6279951601,"package_name":"AnyQt","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":6279951602,"package_name":"sortedcontainers","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":6279951603,"package_name":"numpy","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":6279951604,"package_name":"opencv-python","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false}]},{"ecosystem":"pypi","filepath":"requirements.txt","sha":null,"kind":"manifest","created_at":"2022-10-05T23:56:44.464Z","updated_at":"2022-10-05T23:56:44.464Z","repository_link":"https://gitlab.com/InspectorCell/inspectorcell/blob/main/requirements.txt","dependencies":[{"id":6279951615,"package_name":"AnyQt","ecosystem":"pypi","requirements":"==0.0.13","direct":true,"kind":"runtime","optional":false},{"id":6279951616,"package_name":"bottleneck","ecosystem":"pypi","requirements":"==1.3.2","direct":true,"kind":"runtime","optional":false},{"id":6279951617,"package_name":"dataclasses","ecosystem":"pypi","requirements":"==0.6","direct":true,"kind":"runtime","optional":false},{"id":6279951618,"package_name":"h5py","ecosystem":"pypi","requirements":"==3.4.0","direct":true,"kind":"runtime","optional":false},{"id":6279951619,"package_name":"numpy","ecosystem":"pypi","requirements":"==1.21.4","direct":true,"kind":"runtime","optional":false},{"id":6279951620,"package_name":"Orange3","ecosystem":"pypi","requirements":"\u003e=3.25.1","direct":true,"kind":"runtime","optional":false},{"id":6279951621,"package_name":"orange3-imageanalytics","ecosystem":"pypi","requirements":"==0.6.0","direct":true,"kind":"runtime","optional":false},{"id":6279951622,"package_name":"pathlib","ecosystem":"pypi","requirements":"==1.0.1","direct":true,"kind":"runtime","optional":false},{"id":6279951623,"package_name":"opencv-python","ecosystem":"pypi","requirements":"==4.5.3.56","direct":true,"kind":"runtime","optional":false},{"id":6279951624,"package_name":"PyQt5","ecosystem":"pypi","requirements":"==5.12.3","direct":true,"kind":"runtime","optional":false},{"id":6279951625,"package_name":"pyqt5-sip","ecosystem":"pypi","requirements":"==4.19.18","direct":true,"kind":"runtime","optional":false},{"id":6279951626,"package_name":"pyqtgraph","ecosystem":"pypi","requirements":"==0.10.0","direct":true,"kind":"runtime","optional":false},{"id":6279951627,"package_name":"pytest","ecosystem":"pypi","requirements":"==6.2.5","direct":true,"kind":"runtime","optional":false},{"id":6279951628,"package_name":"pytest-qt","ecosystem":"pypi","requirements":"==4.0.2","direct":true,"kind":"runtime","optional":false},{"id":6279951629,"package_name":"wheel","ecosystem":"pypi","requirements":"==0.37.0","direct":true,"kind":"runtime","optional":false},{"id":6279951630,"package_name":"sortedcontainers","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false}]}],"score":3.1780538303479453,"created_at":"2025-09-04T09:17:46.340Z","updated_at":"2025-10-07T08:04:31.381Z","avatar_url":"https://gitlab.com/uploads/-/system/project/avatar/15417641/ic_logo.png","language":null,"category":"Scientific Software","sub_category":"Peer-reviewed","monthly_downloads":0,"funding_links":[],"readme_doi_urls":[],"works":{},"citation_counts":{},"total_citations":0,"keywords_from_contributors":[],"project_url":"https://science.ecosyste.ms/api/v1/projects/1304","html_url":"https://science.ecosyste.ms/projects/1304"}