{"id":145665,"name":null,"description":"Protegenomics analysis based on Pangenome references","url":"https://github.com/bigbio/pgt-pangenome","last_synced_at":"2025-09-09T14:27:21.491Z","repository":{"id":195316944,"uuid":"691429869","full_name":"bigbio/pgt-pangenome","owner":"bigbio","description":"Protegenomics analysis based on Pangenome references","archived":false,"fork":false,"pushed_at":"2024-05-18T09:10:51.000Z","size":623747,"stargazers_count":0,"open_issues_count":2,"forks_count":0,"subscribers_count":3,"default_branch":"main","last_synced_at":"2024-05-18T16:18:43.081Z","etag":null,"topics":["mass-spectrometry","non-canonical","pangenome","protein","proteogenomics","proteomics","public-proteomics","quantms","variants"],"latest_commit_sha":null,"homepage":"","language":"Jupyter Notebook","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"bsd-2-clause","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/bigbio.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2023-09-14T06:56:55.000Z","updated_at":"2024-05-18T09:10:59.000Z","dependencies_parsed_at":"2024-05-09T12:51:55.392Z","dependency_job_id":null,"html_url":"https://github.com/bigbio/pgt-pangenome","commit_stats":null,"previous_names":["husensofteng/pgt-pangenome"],"tags_count":0,"template":false,"template_full_name":null,"purl":"pkg:github/bigbio/pgt-pangenome","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/bigbio%2Fpgt-pangenome","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/bigbio%2Fpgt-pangenome/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/bigbio%2Fpgt-pangenome/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/bigbio%2Fpgt-pangenome/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/bigbio","download_url":"https://codeload.github.com/bigbio/pgt-pangenome/tar.gz/refs/heads/main","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/bigbio%2Fpgt-pangenome/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":274310605,"owners_count":25261770,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-09-09T02:00:10.223Z","response_time":80,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"owner":{"login":"bigbio","name":"BigBio Stack","uuid":"10880371","kind":"organization","description":"Provide big data solutions Bioinformatics","email":"proteomicsstack@gmail.com","website":"http://bigbio.xyz","location":"Cambridge, UK","twitter":null,"company":null,"icon_url":"https://avatars.githubusercontent.com/u/10880371?v=4","repositories_count":24,"last_synced_at":"2023-03-02T07:10:22.666Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/bigbio","funding_links":[],"total_stars":null,"followers":null,"following":null,"created_at":"2022-11-13T00:32:40.298Z","updated_at":"2023-03-02T07:10:22.706Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/bigbio","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/bigbio/repositories"},"packages":[],"commits":{"message":"Repository syncing started."},"issues_stats":{"full_name":"bigbio/pgt-pangenome","html_url":"https://github.com/bigbio/pgt-pangenome","last_synced_at":null,"status":null,"issues_count":null,"pull_requests_count":null,"avg_time_to_close_issue":null,"avg_time_to_close_pull_request":null,"issues_closed_count":null,"pull_requests_closed_count":null,"pull_request_authors_count":null,"issue_authors_count":null,"avg_comments_per_issue":null,"avg_comments_per_pull_request":null,"merged_pull_requests_count":null,"bot_issues_count":null,"bot_pull_requests_count":null,"past_year_issues_count":null,"past_year_pull_requests_count":null,"past_year_avg_time_to_close_issue":null,"past_year_avg_time_to_close_pull_request":null,"past_year_issues_closed_count":null,"past_year_pull_requests_closed_count":null,"past_year_pull_request_authors_count":null,"past_year_issue_authors_count":null,"past_year_avg_comments_per_issue":null,"past_year_avg_comments_per_pull_request":null,"past_year_bot_issues_count":null,"past_year_bot_pull_requests_count":null,"past_year_merged_pull_requests_count":null,"created_at":"2025-09-01T12:23:29.444Z","updated_at":"2025-09-01T15:58:09.161Z","repository_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/bigbio%2Fpgt-pangenome","issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/bigbio%2Fpgt-pangenome/issues","issue_labels_count":{},"pull_request_labels_count":{},"issue_author_associations_count":{"MEMBER":4},"pull_request_author_associations_count":{},"issue_authors":{"husensofteng":2,"ypriverol":2},"pull_request_authors":{},"host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-09T00:00:11.778Z","repositories_count":10189901,"issues_count":32145474,"pull_requests_count":101314001,"authors_count":10740598,"icon_url":"https://github.com/github.png","host_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories","owners_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/owners","authors_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors"},"past_year_issue_labels_count":{},"past_year_pull_request_labels_count":{},"past_year_issue_author_associations_count":{},"past_year_pull_request_author_associations_count":{},"past_year_issue_authors":{},"past_year_pull_request_authors":{},"maintainers":[{"login":"husensofteng","count":2,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/husensofteng"},{"login":"ypriverol","count":2,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/ypriverol"}],"active_maintainers":[]},"events":{"total":{},"last_year":{}},"keywords":["mass-spectrometry","non-canonical","pangenome","protein","proteogenomics","proteomics","public-proteomics","quantms","variants"],"dependencies":[],"score":null,"created_at":"2025-09-09T00:22:01.394Z","updated_at":"2025-10-07T08:36:28.619Z","avatar_url":"https://github.com/bigbio.png","language":"Jupyter Notebook","category":null,"sub_category":null,"monthly_downloads":0,"funding_links":[],"readme_doi_urls":[],"works":{},"citation_counts":{},"total_citations":0,"keywords_from_contributors":[],"project_url":"https://science.ecosyste.ms/api/v1/projects/145665","html_url":"https://science.ecosyste.ms/projects/145665"}