{"id":148063,"name":null,"description":null,"url":"https://github.com/bioconductor-source/xcms","last_synced_at":"2025-09-09T14:56:37.911Z","repository":{"id":253859575,"uuid":"844760044","full_name":"bioconductor-source/xcms","owner":"bioconductor-source","description":null,"archived":false,"fork":false,"pushed_at":"2024-08-19T23:23:40.000Z","size":48253,"stargazers_count":0,"open_issues_count":0,"forks_count":0,"subscribers_count":2,"default_branch":"devel","last_synced_at":"2024-08-20T03:00:08.496Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":null,"language":"R","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"other","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/bioconductor-source.png","metadata":{"files":{"readme":"README.md","changelog":"NEWS.md","contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2024-08-19T23:12:28.000Z","updated_at":"2024-08-20T03:03:41.216Z","dependencies_parsed_at":"2024-08-20T03:13:44.791Z","dependency_job_id":null,"html_url":"https://github.com/bioconductor-source/xcms","commit_stats":null,"previous_names":["bioconductor-source/xcms"],"tags_count":0,"template":false,"template_full_name":null,"purl":"pkg:github/bioconductor-source/xcms","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/bioconductor-source%2Fxcms","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/bioconductor-source%2Fxcms/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/bioconductor-source%2Fxcms/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/bioconductor-source%2Fxcms/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/bioconductor-source","download_url":"https://codeload.github.com/bioconductor-source/xcms/tar.gz/refs/heads/devel","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/bioconductor-source%2Fxcms/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":274315843,"owners_count":25262705,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-09-09T02:00:10.223Z","response_time":80,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"owner":{"login":"bioconductor-source","name":"(WIP DEV) Bioconductor Packages","uuid":"178512913","kind":"organization","description":"Source code for packages accepted into Bioconductor","email":"maintainer@bioconductor.org","website":"https://bioconductor.org","location":null,"twitter":null,"company":null,"icon_url":"https://avatars.githubusercontent.com/u/178512913?v=4","repositories_count":1,"last_synced_at":"2024-08-20T02:18:46.971Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/bioconductor-source","funding_links":[],"total_stars":0,"followers":0,"following":0,"created_at":"2024-08-20T02:18:47.062Z","updated_at":"2024-08-20T02:18:47.062Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/bioconductor-source","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/bioconductor-source/repositories"},"packages":[],"commits":{"message":"Repository syncing started."},"issues_stats":{"full_name":"bioconductor-source/xcms","html_url":"https://github.com/bioconductor-source/xcms","last_synced_at":null,"status":null,"issues_count":null,"pull_requests_count":null,"avg_time_to_close_issue":null,"avg_time_to_close_pull_request":null,"issues_closed_count":null,"pull_requests_closed_count":null,"pull_request_authors_count":null,"issue_authors_count":null,"avg_comments_per_issue":null,"avg_comments_per_pull_request":null,"merged_pull_requests_count":null,"bot_issues_count":null,"bot_pull_requests_count":null,"past_year_issues_count":null,"past_year_pull_requests_count":null,"past_year_avg_time_to_close_issue":null,"past_year_avg_time_to_close_pull_request":null,"past_year_issues_closed_count":null,"past_year_pull_requests_closed_count":null,"past_year_pull_request_authors_count":null,"past_year_issue_authors_count":null,"past_year_avg_comments_per_issue":null,"past_year_avg_comments_per_pull_request":null,"past_year_bot_issues_count":null,"past_year_bot_pull_requests_count":null,"past_year_merged_pull_requests_count":null,"created_at":"2025-09-09T14:56:18.663Z","updated_at":"2025-09-09T14:56:18.663Z","repository_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/bioconductor-source%2Fxcms","issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/bioconductor-source%2Fxcms/issues","issue_labels_count":{},"pull_request_labels_count":{},"issue_author_associations_count":{},"pull_request_author_associations_count":{},"issue_authors":{},"pull_request_authors":{},"host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-09T00:00:11.778Z","repositories_count":10193878,"issues_count":32254962,"pull_requests_count":101822519,"authors_count":10740620,"icon_url":"https://github.com/github.png","host_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories","owners_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/owners","authors_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors"},"past_year_issue_labels_count":{},"past_year_pull_request_labels_count":{},"past_year_issue_author_associations_count":{},"past_year_pull_request_author_associations_count":{},"past_year_issue_authors":{},"past_year_pull_request_authors":{},"maintainers":[],"active_maintainers":[]},"events":{"total":{},"last_year":{}},"keywords":[],"dependencies":[{"ecosystem":"actions","filepath":".github/workflows/check-bioc.yml","sha":null,"kind":"manifest","created_at":"2024-08-20T03:13:44.331Z","updated_at":"2024-08-20T03:13:44.331Z","repository_link":"https://github.com/bioconductor-source/xcms/blob/devel/.github/workflows/check-bioc.yml","dependencies":[{"id":19802060523,"package_name":"actions/checkout","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":19802060524,"package_name":"r-lib/actions/setup-r","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":19802060525,"package_name":"r-lib/actions/setup-pandoc","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":19802060526,"package_name":"actions/cache","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":19802060527,"package_name":"actions/upload-artifact","ecosystem":"actions","requirements":"master","direct":true,"kind":"composite","optional":false}]},{"ecosystem":"cran","filepath":"DESCRIPTION","sha":null,"kind":"manifest","created_at":"2024-08-20T03:13:44.544Z","updated_at":"2024-08-20T03:13:44.544Z","repository_link":"https://github.com/bioconductor-source/xcms/blob/devel/DESCRIPTION","dependencies":[{"id":19802060528,"package_name":"R","ecosystem":"cran","requirements":"\u003e= 4.0.0","direct":true,"kind":"depends","optional":false},{"id":19802060529,"package_name":"BiocParallel","ecosystem":"cran","requirements":"\u003e= 1.8.0","direct":true,"kind":"depends","optional":false},{"id":19802060530,"package_name":"MSnbase","ecosystem":"cran","requirements":"\u003e= 2.29.3","direct":true,"kind":"imports","optional":false},{"id":19802060531,"package_name":"mzR","ecosystem":"cran","requirements":"\u003e= 2.25.3","direct":true,"kind":"imports","optional":false},{"id":19802060532,"package_name":"methods","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":19802060533,"package_name":"Biobase","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":19802060534,"package_name":"BiocGenerics","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":19802060535,"package_name":"ProtGenerics","ecosystem":"cran","requirements":"\u003e= 1.37.1","direct":true,"kind":"imports","optional":false},{"id":19802060536,"package_name":"lattice","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":19802060537,"package_name":"MassSpecWavelet","ecosystem":"cran","requirements":"\u003e= 1.66.0","direct":true,"kind":"imports","optional":false},{"id":19802060538,"package_name":"S4Vectors","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":19802060539,"package_name":"IRanges","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":19802060540,"package_name":"SummarizedExperiment","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":19802060541,"package_name":"MsCoreUtils","ecosystem":"cran","requirements":"\u003e= 1.15.5","direct":true,"kind":"imports","optional":false},{"id":19802060542,"package_name":"MsFeatures","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":19802060543,"package_name":"MsExperiment","ecosystem":"cran","requirements":"\u003e= 1.5.4","direct":true,"kind":"imports","optional":false},{"id":19802060544,"package_name":"Spectra","ecosystem":"cran","requirements":"\u003e= 1.15.7","direct":true,"kind":"imports","optional":false},{"id":19802060545,"package_name":"progress","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":19802060546,"package_name":"RColorBrewer","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":19802060547,"package_name":"MetaboCoreUtils","ecosystem":"cran","requirements":"\u003e= 1.11.2","direct":true,"kind":"imports","optional":false},{"id":19802060548,"package_name":"BiocStyle","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":19802060549,"package_name":"caTools","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":19802060550,"package_name":"knitr","ecosystem":"cran","requirements":"\u003e= 1.1.0","direct":true,"kind":"suggests","optional":false},{"id":19802060551,"package_name":"faahKO","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":19802060552,"package_name":"msdata","ecosystem":"cran","requirements":"\u003e= 0.25.1","direct":true,"kind":"suggests","optional":false},{"id":19802060553,"package_name":"ncdf4","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":19802060554,"package_name":"testthat","ecosystem":"cran","requirements":"\u003e= 3.1.9","direct":true,"kind":"suggests","optional":false},{"id":19802060555,"package_name":"pander","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":19802060556,"package_name":"rmarkdown","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":19802060557,"package_name":"MALDIquant","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":19802060558,"package_name":"pheatmap","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":19802060559,"package_name":"RANN","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":19802060560,"package_name":"multtest","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":19802060561,"package_name":"MsBackendMgf","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":19802060562,"package_name":"signal","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":19802060563,"package_name":"mgcv","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":19802060564,"package_name":"Rgraphviz","ecosystem":"cran","requirements":"*","direct":true,"kind":"enhances","optional":false},{"id":19802060565,"package_name":"rgl","ecosystem":"cran","requirements":"*","direct":true,"kind":"enhances","optional":false}]}],"score":null,"created_at":"2025-09-09T00:25:36.922Z","updated_at":"2025-10-07T08:36:57.790Z","avatar_url":"https://github.com/bioconductor-source.png","language":"R","category":null,"sub_category":null,"monthly_downloads":0,"funding_links":[],"readme_doi_urls":[],"works":{},"citation_counts":{},"total_citations":0,"keywords_from_contributors":[],"project_url":"https://science.ecosyste.ms/api/v1/projects/148063","html_url":"https://science.ecosyste.ms/projects/148063"}