{"id":148095,"name":null,"description":null,"url":"https://github.com/bioconductor-source/visiumstitched","last_synced_at":"2025-09-09T14:56:46.212Z","repository":{"id":253859537,"uuid":"844746950","full_name":"bioconductor-source/visiumStitched","owner":"bioconductor-source","description":null,"archived":false,"fork":false,"pushed_at":"2024-08-19T22:26:07.000Z","size":4432,"stargazers_count":0,"open_issues_count":0,"forks_count":0,"subscribers_count":2,"default_branch":"devel","last_synced_at":"2024-08-20T03:00:04.799Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":null,"language":"R","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":null,"status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/bioconductor-source.png","metadata":{"files":{"readme":"README.Rmd","changelog":"NEWS.md","contributing":".github/CONTRIBUTING.md","funding":null,"license":null,"code_of_conduct":".github/CODE_OF_CONDUCT.md","threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":".github/SUPPORT.md","governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2024-08-19T22:25:52.000Z","updated_at":"2024-08-20T03:03:40.163Z","dependencies_parsed_at":"2024-08-21T19:50:43.151Z","dependency_job_id":null,"html_url":"https://github.com/bioconductor-source/visiumStitched","commit_stats":null,"previous_names":["bioconductor-source/visiumstitched"],"tags_count":0,"template":false,"template_full_name":null,"purl":"pkg:github/bioconductor-source/visiumStitched","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/bioconductor-source%2FvisiumStitched","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/bioconductor-source%2FvisiumStitched/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/bioconductor-source%2FvisiumStitched/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/bioconductor-source%2FvisiumStitched/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/bioconductor-source","download_url":"https://codeload.github.com/bioconductor-source/visiumStitched/tar.gz/refs/heads/devel","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/bioconductor-source%2FvisiumStitched/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":274315866,"owners_count":25262705,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-09-09T02:00:10.223Z","response_time":80,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"owner":{"login":"bioconductor-source","name":"(WIP DEV) Bioconductor Packages","uuid":"178512913","kind":"organization","description":"Source code for packages accepted into Bioconductor","email":"maintainer@bioconductor.org","website":"https://bioconductor.org","location":null,"twitter":null,"company":null,"icon_url":"https://avatars.githubusercontent.com/u/178512913?v=4","repositories_count":1,"last_synced_at":"2024-08-20T02:18:46.971Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/bioconductor-source","funding_links":[],"total_stars":0,"followers":0,"following":0,"created_at":"2024-08-20T02:18:47.062Z","updated_at":"2024-08-20T02:18:47.062Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/bioconductor-source","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/bioconductor-source/repositories"},"packages":[],"commits":{"message":"Repository syncing started."},"issues_stats":{"full_name":"bioconductor-source/visiumstitched","html_url":"https://github.com/bioconductor-source/visiumstitched","last_synced_at":null,"status":null,"issues_count":null,"pull_requests_count":null,"avg_time_to_close_issue":null,"avg_time_to_close_pull_request":null,"issues_closed_count":null,"pull_requests_closed_count":null,"pull_request_authors_count":null,"issue_authors_count":null,"avg_comments_per_issue":null,"avg_comments_per_pull_request":null,"merged_pull_requests_count":null,"bot_issues_count":null,"bot_pull_requests_count":null,"past_year_issues_count":null,"past_year_pull_requests_count":null,"past_year_avg_time_to_close_issue":null,"past_year_avg_time_to_close_pull_request":null,"past_year_issues_closed_count":null,"past_year_pull_requests_closed_count":null,"past_year_pull_request_authors_count":null,"past_year_issue_authors_count":null,"past_year_avg_comments_per_issue":null,"past_year_avg_comments_per_pull_request":null,"past_year_bot_issues_count":null,"past_year_bot_pull_requests_count":null,"past_year_merged_pull_requests_count":null,"created_at":"2025-09-09T14:56:32.086Z","updated_at":"2025-09-09T14:56:32.086Z","repository_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/bioconductor-source%2Fvisiumstitched","issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/bioconductor-source%2Fvisiumstitched/issues","issue_labels_count":{},"pull_request_labels_count":{},"issue_author_associations_count":{},"pull_request_author_associations_count":{},"issue_authors":{},"pull_request_authors":{},"host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-09T00:00:11.778Z","repositories_count":10193878,"issues_count":32254962,"pull_requests_count":101822519,"authors_count":10740620,"icon_url":"https://github.com/github.png","host_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories","owners_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/owners","authors_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors"},"past_year_issue_labels_count":{},"past_year_pull_request_labels_count":{},"past_year_issue_author_associations_count":{},"past_year_pull_request_author_associations_count":{},"past_year_issue_authors":{},"past_year_pull_request_authors":{},"maintainers":[],"active_maintainers":[]},"events":{"total":{},"last_year":{}},"keywords":[],"dependencies":[{"ecosystem":"actions","filepath":".github/workflows/check-bioc.yml","sha":null,"kind":"manifest","created_at":"2024-08-20T03:03:37.939Z","updated_at":"2024-08-20T03:03:37.939Z","repository_link":"https://github.com/bioconductor-source/visiumStitched/blob/devel/.github/workflows/check-bioc.yml","dependencies":[{"id":19801972258,"package_name":"actions/checkout","ecosystem":"actions","requirements":"v3","direct":true,"kind":"composite","optional":false},{"id":19801972259,"package_name":"r-lib/actions/setup-r","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":19801972260,"package_name":"r-lib/actions/setup-pandoc","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":19801972261,"package_name":"actions/cache","ecosystem":"actions","requirements":"v3","direct":true,"kind":"composite","optional":false},{"id":19801972262,"package_name":"JamesIves/github-pages-deploy-action","ecosystem":"actions","requirements":"releases/v4","direct":true,"kind":"composite","optional":false},{"id":19801972263,"package_name":"actions/upload-artifact","ecosystem":"actions","requirements":"master","direct":true,"kind":"composite","optional":false},{"id":19801972264,"package_name":"docker/setup-qemu-action","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":19801972265,"package_name":"docker/setup-buildx-action","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":19801972266,"package_name":"docker/login-action","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":19801972267,"package_name":"docker/build-push-action","ecosystem":"actions","requirements":"v4","direct":true,"kind":"composite","optional":false}]},{"ecosystem":"cran","filepath":"DESCRIPTION","sha":null,"kind":"manifest","created_at":"2024-08-20T03:03:38.196Z","updated_at":"2024-08-20T03:03:38.196Z","repository_link":"https://github.com/bioconductor-source/visiumStitched/blob/devel/DESCRIPTION","dependencies":[{"id":19801972356,"package_name":"R","ecosystem":"cran","requirements":"\u003e= 4.4","direct":true,"kind":"depends","optional":false},{"id":19801972357,"package_name":"SpatialExperiment","ecosystem":"cran","requirements":"*","direct":true,"kind":"depends","optional":false},{"id":19801972358,"package_name":"dplyr","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":19801972359,"package_name":"DropletUtils","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":19801972360,"package_name":"grDevices","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":19801972361,"package_name":"imager","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":19801972362,"package_name":"pkgcond","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":19801972760,"package_name":"readr","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":19801972761,"package_name":"rjson","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":19801972762,"package_name":"S4Vectors","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":19801972763,"package_name":"Seurat","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":19801972764,"package_name":"spatialLIBD","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":19801972765,"package_name":"stringr","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":19801972766,"package_name":"SummarizedExperiment","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":19801972767,"package_name":"xml2","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":19801972768,"package_name":"BiocFileCache","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":19801972769,"package_name":"BiocStyle","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":19801972770,"package_name":"ggplot2","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":19801972771,"package_name":"knitr","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":19801972772,"package_name":"RefManageR","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":19801972775,"package_name":"rmarkdown","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":19801972778,"package_name":"sessioninfo","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":19801972781,"package_name":"testthat","ecosystem":"cran","requirements":"\u003e= 3.0.0","direct":true,"kind":"suggests","optional":false}]}],"score":null,"created_at":"2025-09-09T00:25:36.980Z","updated_at":"2025-10-07T08:36:58.331Z","avatar_url":"https://github.com/bioconductor-source.png","language":"R","category":null,"sub_category":null,"monthly_downloads":0,"funding_links":[],"readme_doi_urls":[],"works":{},"citation_counts":{},"total_citations":0,"keywords_from_contributors":[],"project_url":"https://science.ecosyste.ms/api/v1/projects/148095","html_url":"https://science.ecosyste.ms/projects/148095"}