{"id":149687,"name":null,"description":null,"url":"https://github.com/biojulia/gff3.jl","last_synced_at":"2025-09-09T15:15:12.699Z","repository":{"id":49135977,"uuid":"152175945","full_name":"BioJulia/GFF3.jl","owner":"BioJulia","description":null,"archived":false,"fork":false,"pushed_at":"2024-04-05T08:49:12.000Z","size":435,"stargazers_count":13,"open_issues_count":6,"forks_count":5,"subscribers_count":9,"default_branch":"develop","last_synced_at":"2025-08-25T01:44:28.188Z","etag":null,"topics":["bioinformatics","gff3","gff3-files","gff3-format"],"latest_commit_sha":null,"homepage":"","language":"Julia","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"mit","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/BioJulia.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":".github/FUNDING.yml","license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null},"funding":{"open_collective":"biojulia"}},"created_at":"2018-10-09T02:33:32.000Z","updated_at":"2024-11-14T20:34:46.000Z","dependencies_parsed_at":"2022-08-12T20:01:04.837Z","dependency_job_id":"a7ee750d-9279-4bcc-8ca7-34cad0fb6738","html_url":"https://github.com/BioJulia/GFF3.jl","commit_stats":{"total_commits":45,"total_committers":3,"mean_commits":15.0,"dds":0.06666666666666665,"last_synced_commit":"03e3b79197acedf79a30e3dc14a784e84872fd79"},"previous_names":[],"tags_count":6,"template":false,"template_full_name":null,"purl":"pkg:github/BioJulia/GFF3.jl","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/BioJulia%2FGFF3.jl","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/BioJulia%2FGFF3.jl/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/BioJulia%2FGFF3.jl/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/BioJulia%2FGFF3.jl/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/BioJulia","download_url":"https://codeload.github.com/BioJulia/GFF3.jl/tar.gz/refs/heads/develop","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/BioJulia%2FGFF3.jl/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":274316665,"owners_count":25262710,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-09-09T02:00:10.223Z","response_time":80,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"owner":{"login":"BioJulia","name":"BioJulia","uuid":"6486271","kind":"organization","description":"Bioinformatics and Computational Biology in Julia","email":null,"website":"https://biojulia.dev","location":null,"twitter":null,"company":null,"icon_url":"https://avatars.githubusercontent.com/u/6486271?v=4","repositories_count":79,"last_synced_at":"2024-10-30T00:01:04.629Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/BioJulia","funding_links":[],"total_stars":1652,"followers":218,"following":0,"created_at":"2022-11-03T07:06:10.033Z","updated_at":"2024-10-30T00:01:04.629Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/BioJulia","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/BioJulia/repositories"},"packages":[{"id":4314955,"name":"GFF3","ecosystem":"julia","description":"","homepage":"","licenses":"MIT","normalized_licenses":["MIT"],"repository_url":"https://github.com/BioJulia/GFF3.jl","keywords_array":["bioinformatics","gff3","gff3-files","gff3-format"],"namespace":null,"versions_count":6,"first_release_published_at":"2020-02-28T05:13:20.000Z","latest_release_published_at":"2023-07-24T22:59:55.845Z","latest_release_number":"0.2.3","last_synced_at":"2025-08-25T00:29:55.386Z","created_at":"2022-04-19T16:36:50.623Z","updated_at":"2025-08-25T00:29:55.386Z","registry_url":"https://juliahub.com/ui/Packages/General/GFF3/","install_command":"Pkg.add(\"GFF3\")","documentation_url":"https://docs.juliahub.com/General/GFF3/stable/","metadata":{"uuid":"af1dc308-cb6b-11e8-32f0-31192efa90f6"},"repo_metadata":{"uuid":"152175945","full_name":"BioJulia/GFF3.jl","owner":"BioJulia","description":null,"archived":false,"fork":false,"pushed_at":"2023-10-23T16:10:34.000Z","size":433,"stargazers_count":9,"open_issues_count":6,"forks_count":5,"subscribers_count":11,"default_branch":"develop","last_synced_at":"2024-01-02T06:47:00.773Z","etag":null,"topics":["bioinformatics","gff3","gff3-files","gff3-format"],"latest_commit_sha":null,"homepage":"","language":"Julia","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"mit","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/BioJulia.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":".github/FUNDING.yml","license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null},"funding":{"open_collective":"biojulia"}},"created_at":"2018-10-09T02:33:32.000Z","updated_at":"2023-11-01T19:36:04.000Z","dependencies_parsed_at":"2022-08-12T20:01:04.837Z","dependency_job_id":"a7ee750d-9279-4bcc-8ca7-34cad0fb6738","html_url":"https://github.com/BioJulia/GFF3.jl","commit_stats":{"total_commits":43,"total_committers":2,"mean_commits":21.5,"dds":"0.023255813953488413","last_synced_commit":"a8fa0dd932783a634b89263bfe749d03c179fe23"},"previous_names":[],"tags_count":6,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/BioJulia%2FGFF3.jl","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/BioJulia%2FGFF3.jl/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/BioJulia%2FGFF3.jl/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/BioJulia%2FGFF3.jl/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/BioJulia","download_url":"https://codeload.github.com/BioJulia/GFF3.jl/tar.gz/refs/heads/develop","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":178959707,"owners_count":10749946,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"},"owner_record":{"login":"BioJulia","name":"BioJulia","uuid":"6486271","kind":"organization","description":"Bioinformatics and Computational Biology in Julia","email":null,"website":"https://biojulia.net","location":null,"twitter":null,"company":null,"icon_url":"https://avatars.githubusercontent.com/u/6486271?v=4","repositories_count":53,"last_synced_at":"2023-03-16T16:15:25.357Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/BioJulia","created_at":"2022-11-03T07:06:10.033Z","updated_at":"2023-03-16T16:15:25.730Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/BioJulia","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/BioJulia/repositories"},"tags":[{"name":"v0.2.3","sha":"a8fa0dd932783a634b89263bfe749d03c179fe23","kind":"tag","published_at":"2023-07-24T22:29:19.000Z","download_url":"https://codeload.github.com/BioJulia/GFF3.jl/tar.gz/v0.2.3","html_url":"https://github.com/BioJulia/GFF3.jl/releases/tag/v0.2.3","dependencies_parsed_at":null,"dependency_job_id":null,"tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/BioJulia%2FGFF3.jl/tags/v0.2.3","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/BioJulia%2FGFF3.jl/tags/v0.2.3/manifests"},{"name":"v0.2.2","sha":"6ba310e8167203426cbfe1686486dc3a6fc23ed6","kind":"commit","published_at":"2022-08-03T07:06:10.000Z","download_url":"https://codeload.github.com/BioJulia/GFF3.jl/tar.gz/v0.2.2","html_url":"https://github.com/BioJulia/GFF3.jl/releases/tag/v0.2.2","dependencies_parsed_at":null,"dependency_job_id":null,"tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/BioJulia%2FGFF3.jl/tags/v0.2.2","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/BioJulia%2FGFF3.jl/tags/v0.2.2/manifests"},{"name":"v0.2.1","sha":"c0ba45a8ffc4bfdea2b6d89455a132f61f24e1e3","kind":"tag","published_at":"2021-06-27T10:28:46.000Z","download_url":"https://codeload.github.com/BioJulia/GFF3.jl/tar.gz/v0.2.1","html_url":"https://github.com/BioJulia/GFF3.jl/releases/tag/v0.2.1","dependencies_parsed_at":null,"dependency_job_id":null,"tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/BioJulia%2FGFF3.jl/tags/v0.2.1","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/BioJulia%2FGFF3.jl/tags/v0.2.1/manifests"},{"name":"v0.2.0","sha":"3278e1b73a8071d18d43c64fe52d1ee520275746","kind":"tag","published_at":"2021-06-26T14:44:33.000Z","download_url":"https://codeload.github.com/BioJulia/GFF3.jl/tar.gz/v0.2.0","html_url":"https://github.com/BioJulia/GFF3.jl/releases/tag/v0.2.0","dependencies_parsed_at":null,"dependency_job_id":null,"tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/BioJulia%2FGFF3.jl/tags/v0.2.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/BioJulia%2FGFF3.jl/tags/v0.2.0/manifests"},{"name":"v0.1.1","sha":"b0da4b74a0fc8f5abe9ec4d153f3ee4dfbef7cbb","kind":"tag","published_at":"2021-06-25T13:58:49.000Z","download_url":"https://codeload.github.com/BioJulia/GFF3.jl/tar.gz/v0.1.1","html_url":"https://github.com/BioJulia/GFF3.jl/releases/tag/v0.1.1","dependencies_parsed_at":null,"dependency_job_id":null,"tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/BioJulia%2FGFF3.jl/tags/v0.1.1","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/BioJulia%2FGFF3.jl/tags/v0.1.1/manifests"},{"name":"v0.1.0","sha":"d7892ed00d46b3dd1f75b1397869ad730589aeb5","kind":"commit","published_at":"2020-02-28T05:13:20.000Z","download_url":"https://codeload.github.com/BioJulia/GFF3.jl/tar.gz/v0.1.0","html_url":"https://github.com/BioJulia/GFF3.jl/releases/tag/v0.1.0","dependencies_parsed_at":null,"dependency_job_id":null,"tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/BioJulia%2FGFF3.jl/tags/v0.1.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/BioJulia%2FGFF3.jl/tags/v0.1.0/manifests"}]},"repo_metadata_updated_at":"2024-01-03T09:34:10.538Z","dependent_packages_count":0,"downloads":62,"downloads_period":"total","dependent_repos_count":0,"rankings":{"downloads":null,"dependent_repos_count":9.939726027397262,"dependent_packages_count":38.915068493150685,"stargazers_count":39.81369863013698,"forks_count":24.504109589041096,"average":28.293150684931508},"purl":"pkg:julia/GFF3","advisories":[],"docker_usage_url":"https://docker.ecosyste.ms/usage/julia/GFF3","docker_dependents_count":null,"docker_downloads_count":null,"usage_url":"https://repos.ecosyste.ms/usage/julia/GFF3","dependent_repositories_url":"https://repos.ecosyste.ms/api/v1/usage/julia/GFF3/dependencies","status":null,"funding_links":["https://opencollective.com/biojulia"],"critical":false,"issue_metadata":{"last_synced_at":"2024-01-03T09:34:04.844Z","issues_count":8,"pull_requests_count":10,"avg_time_to_close_issue":19630038.5,"avg_time_to_close_pull_request":8416928.5,"issues_closed_count":4,"pull_requests_closed_count":8,"pull_request_authors_count":6,"issue_authors_count":8,"avg_comments_per_issue":2.375,"avg_comments_per_pull_request":1.3,"merged_pull_requests_count":4,"bot_issues_count":0,"bot_pull_requests_count":1,"past_year_issues_count":2,"past_year_pull_requests_count":3,"past_year_avg_time_to_close_issue":10900473.0,"past_year_avg_time_to_close_pull_request":831366.0,"past_year_issues_closed_count":1,"past_year_pull_requests_closed_count":2,"past_year_pull_request_authors_count":3,"past_year_issue_authors_count":2,"past_year_avg_comments_per_issue":0.5,"past_year_avg_comments_per_pull_request":1.6666666666666667,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":1,"issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/BioJulia%2FGFF3.jl/issues"},"versions_url":"https://packages.ecosyste.ms/api/v1/registries/juliahub.com/packages/GFF3/versions","version_numbers_url":"https://packages.ecosyste.ms/api/v1/registries/juliahub.com/packages/GFF3/version_numbers","dependent_packages_url":"https://packages.ecosyste.ms/api/v1/registries/juliahub.com/packages/GFF3/dependent_packages","related_packages_url":"https://packages.ecosyste.ms/api/v1/registries/juliahub.com/packages/GFF3/related_packages","maintainers":[],"registry":{"name":"juliahub.com","url":"https://juliahub.com","ecosystem":"julia","default":true,"packages_count":12698,"maintainers_count":0,"namespaces_count":0,"keywords_count":7444,"github":"JuliaRegistries","metadata":{"funded_packages_count":856},"icon_url":"https://github.com/JuliaRegistries.png","created_at":"2022-04-19T16:34:08.340Z","updated_at":"2025-09-09T06:56:17.241Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/juliahub.com/packages","maintainers_url":"https://packages.ecosyste.ms/api/v1/registries/juliahub.com/maintainers","namespaces_url":"https://packages.ecosyste.ms/api/v1/registries/juliahub.com/namespaces"}}],"commits":{"id":705898,"full_name":"BioJulia/GFF3.jl","default_branch":"develop","committers":[{"name":"Ciarán O'Mara","email":"Ciaran.OMara@utas.edu.au","login":null,"count":42},{"name":"Jonathan Bieler","email":"jonathan.bieler@alumni.epfl.ch","login":null,"count":2},{"name":"Jakob Nybo Nissen","email":"jakobnybonissen@gmail.com","login":null,"count":1}],"total_commits":45,"total_committers":3,"total_bot_commits":0,"total_bot_committers":0,"mean_commits":15.0,"dds":0.06666666666666665,"past_year_committers":[{"name":"Ciarán O'Mara","email":"Ciaran.OMara@utas.edu.au","login":null,"count":3},{"name":"Jonathan Bieler","email":"jonathan.bieler@alumni.epfl.ch","login":null,"count":2}],"past_year_total_commits":5,"past_year_total_committers":2,"past_year_total_bot_commits":0,"past_year_total_bot_committers":0,"past_year_mean_commits":2.5,"past_year_dds":0.4,"last_synced_at":"2025-07-04T16:03:49.700Z","last_synced_commit":"03e3b79197acedf79a30e3dc14a784e84872fd79","created_at":"2023-03-09T12:17:01.364Z","updated_at":"2025-07-04T16:03:49.701Z","commits_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories/BioJulia%2FGFF3.jl/commits","host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-09T00:17:06.873Z","repositories_count":5525813,"commits_count":868589080,"contributors_count":31964088,"owners_count":917266,"icon_url":"https://github.com/github.png","host_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories"}},"issues_stats":{"full_name":"BioJulia/GFF3.jl","html_url":"https://github.com/BioJulia/GFF3.jl","last_synced_at":"2025-07-04T15:49:50.746Z","status":null,"issues_count":9,"pull_requests_count":10,"avg_time_to_close_issue":19630038.5,"avg_time_to_close_pull_request":9062771.777777778,"issues_closed_count":4,"pull_requests_closed_count":9,"pull_request_authors_count":6,"issue_authors_count":9,"avg_comments_per_issue":2.111111111111111,"avg_comments_per_pull_request":1.4,"merged_pull_requests_count":5,"bot_issues_count":0,"bot_pull_requests_count":1,"past_year_issues_count":1,"past_year_pull_requests_count":0,"past_year_avg_time_to_close_issue":null,"past_year_avg_time_to_close_pull_request":null,"past_year_issues_closed_count":0,"past_year_pull_requests_closed_count":0,"past_year_pull_request_authors_count":0,"past_year_issue_authors_count":1,"past_year_avg_comments_per_issue":0.0,"past_year_avg_comments_per_pull_request":null,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":0,"created_at":"2023-05-10T15:48:53.376Z","updated_at":"2025-08-31T00:31:09.785Z","repository_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/BioJulia%2FGFF3.jl","issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/BioJulia%2FGFF3.jl/issues","issue_labels_count":{"bug":1,"enhancement":1},"pull_request_labels_count":{"enhancement":1},"issue_author_associations_count":{"NONE":8},"pull_request_author_associations_count":{"MEMBER":6,"NONE":3,"CONTRIBUTOR":1},"issue_authors":{"banhbio":1,"junjunlab":1,"gtollefson":1,"tecosaur":1,"mdhe1248":1,"JuliaTagBot":1,"lysogeny":1,"cihga39871":1},"pull_request_authors":{"CiaranOMara":4,"cjprybol":2,"github-actions[bot]":1,"jakobnissen":1,"jonathanBieler":1,"SabrinaJaye":1},"host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-03T00:00:08.273Z","repositories_count":10062770,"issues_count":31096038,"pull_requests_count":94471412,"authors_count":10686459,"icon_url":"https://github.com/github.png","host_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories","owners_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/owners","authors_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors"},"past_year_issue_labels_count":{},"past_year_pull_request_labels_count":{},"past_year_issue_author_associations_count":{"NONE":1},"past_year_pull_request_author_associations_count":{},"past_year_issue_authors":{"tecosaur":1},"past_year_pull_request_authors":{},"maintainers":[{"login":"CiaranOMara","count":4,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/CiaranOMara"},{"login":"jakobnissen","count":1,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/jakobnissen"},{"login":"SabrinaJaye","count":1,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/SabrinaJaye"}],"active_maintainers":[]},"events":{"total":{"IssuesEvent":1,"WatchEvent":1},"last_year":{"IssuesEvent":1,"WatchEvent":1}},"keywords":["bioinformatics","gff3","gff3-files","gff3-format"],"dependencies":[],"score":8.170185652879642,"created_at":"2025-09-09T00:27:57.265Z","updated_at":"2025-10-07T08:37:20.994Z","avatar_url":"https://github.com/BioJulia.png","language":"Julia","category":null,"sub_category":null,"monthly_downloads":0,"funding_links":["https://opencollective.com/biojulia"],"readme_doi_urls":[],"works":{},"citation_counts":{},"total_citations":0,"keywords_from_contributors":["biojulia","bam","bam-files","bam-format","sam","sam-files","sam-format"],"project_url":"https://science.ecosyste.ms/api/v1/projects/149687","html_url":"https://science.ecosyste.ms/projects/149687"}