{"id":150138,"name":null,"description":"A pre-trained representation from a transformers model for inference on insect DNA barcoding data. ","url":"https://github.com/bioscan-ml/barcodebert","last_synced_at":"2025-09-09T15:19:05.046Z","repository":{"id":205129932,"uuid":"602726133","full_name":"bioscan-ml/BarcodeBERT","owner":"bioscan-ml","description":"A pre-trained representation from a transformers model for inference on insect DNA barcoding data. ","archived":false,"fork":false,"pushed_at":"2025-08-11T19:33:02.000Z","size":26658,"stargazers_count":13,"open_issues_count":3,"forks_count":5,"subscribers_count":4,"default_branch":"main","last_synced_at":"2025-08-11T21:26:14.115Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":null,"language":"HTML","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"mit","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/bioscan-ml.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null}},"created_at":"2023-02-16T20:16:29.000Z","updated_at":"2025-08-05T09:16:06.000Z","dependencies_parsed_at":null,"dependency_job_id":"8185073c-1aaf-4eab-848d-bf3a0c41e3e1","html_url":"https://github.com/bioscan-ml/BarcodeBERT","commit_stats":null,"previous_names":["kari-genomics-lab/barcodebert","bioscan-ml/barcodebert"],"tags_count":1,"template":false,"template_full_name":null,"purl":"pkg:github/bioscan-ml/BarcodeBERT","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/bioscan-ml%2FBarcodeBERT","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/bioscan-ml%2FBarcodeBERT/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/bioscan-ml%2FBarcodeBERT/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/bioscan-ml%2FBarcodeBERT/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/bioscan-ml","download_url":"https://codeload.github.com/bioscan-ml/BarcodeBERT/tar.gz/refs/heads/main","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/bioscan-ml%2FBarcodeBERT/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":274316608,"owners_count":25262710,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-09-09T02:00:10.223Z","response_time":80,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"owner":{"login":"bioscan-ml","name":"BIOSCAN","uuid":"175227258","kind":"organization","description":"Illuminating biodiversity with DNA-based identification systems","email":"contact@bioscancanada.org","website":"https://biodiversitygenomics.net/research/bioscan/","location":null,"twitter":null,"company":null,"icon_url":"https://avatars.githubusercontent.com/u/175227258?v=4","repositories_count":1,"last_synced_at":"2024-10-29T05:17:09.632Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/bioscan-ml","funding_links":[],"total_stars":10,"followers":3,"following":0,"created_at":"2024-10-29T05:17:09.653Z","updated_at":"2024-10-29T05:17:09.653Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/bioscan-ml","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/bioscan-ml/repositories"},"packages":[],"commits":{"message":"Repository syncing started."},"issues_stats":{"full_name":"bioscan-ml/BarcodeBERT","html_url":"https://github.com/bioscan-ml/BarcodeBERT","last_synced_at":"2025-08-31T16:22:35.107Z","status":null,"issues_count":1,"pull_requests_count":8,"avg_time_to_close_issue":null,"avg_time_to_close_pull_request":5472830.666666667,"issues_closed_count":0,"pull_requests_closed_count":6,"pull_request_authors_count":4,"issue_authors_count":1,"avg_comments_per_issue":0.0,"avg_comments_per_pull_request":0.625,"merged_pull_requests_count":5,"bot_issues_count":0,"bot_pull_requests_count":3,"past_year_issues_count":1,"past_year_pull_requests_count":7,"past_year_avg_time_to_close_issue":null,"past_year_avg_time_to_close_pull_request":616047.0,"past_year_issues_closed_count":0,"past_year_pull_requests_closed_count":5,"past_year_pull_request_authors_count":4,"past_year_issue_authors_count":1,"past_year_avg_comments_per_issue":0.0,"past_year_avg_comments_per_pull_request":0.7142857142857143,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":3,"past_year_merged_pull_requests_count":5,"created_at":"2025-08-29T18:08:15.095Z","updated_at":"2025-08-31T16:22:35.108Z","repository_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/bioscan-ml%2FBarcodeBERT","issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/bioscan-ml%2FBarcodeBERT/issues","issue_labels_count":{},"pull_request_labels_count":{"documentation":1},"issue_author_associations_count":{"NONE":1},"pull_request_author_associations_count":{"MEMBER":2,"NONE":2,"CONTRIBUTOR":2},"issue_authors":{"ychuest":1},"pull_request_authors":{"pre-commit-ci[bot]":3,"scottclowe":2,"NotMyLyfe":1},"host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-09T00:00:11.778Z","repositories_count":10193878,"issues_count":32254962,"pull_requests_count":101822519,"authors_count":10740620,"icon_url":"https://github.com/github.png","host_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories","owners_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/owners","authors_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors"},"past_year_issue_labels_count":{},"past_year_pull_request_labels_count":{"documentation":1},"past_year_issue_author_associations_count":{"NONE":1},"past_year_pull_request_author_associations_count":{"MEMBER":2,"NONE":2,"CONTRIBUTOR":2},"past_year_issue_authors":{"ychuest":1},"past_year_pull_request_authors":{"pre-commit-ci[bot]":3,"scottclowe":2,"NotMyLyfe":1},"maintainers":[{"login":"scottclowe","count":2,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/scottclowe"}],"active_maintainers":[{"login":"scottclowe","count":2,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/scottclowe"}]},"events":{"total":{"CreateEvent":7,"ReleaseEvent":1,"IssuesEvent":1,"WatchEvent":4,"DeleteEvent":2,"IssueCommentEvent":6,"MemberEvent":1,"PushEvent":27,"PullRequestReviewCommentEvent":5,"PullRequestReviewEvent":9,"PullRequestEvent":14,"ForkEvent":2},"last_year":{"CreateEvent":7,"ReleaseEvent":1,"IssuesEvent":1,"WatchEvent":4,"DeleteEvent":2,"IssueCommentEvent":6,"MemberEvent":1,"PushEvent":27,"PullRequestReviewCommentEvent":5,"PullRequestReviewEvent":9,"PullRequestEvent":14,"ForkEvent":2}},"keywords":[],"dependencies":[],"score":null,"created_at":"2025-09-09T00:28:58.133Z","updated_at":"2025-10-07T08:37:25.801Z","avatar_url":"https://github.com/bioscan-ml.png","language":"HTML","category":null,"sub_category":null,"monthly_downloads":0,"funding_links":[],"readme_doi_urls":["https://doi.org/10.5281/zenodo.15650124"],"works":{},"citation_counts":{},"total_citations":0,"keywords_from_contributors":[],"project_url":"https://science.ecosyste.ms/api/v1/projects/150138","html_url":"https://science.ecosyste.ms/projects/150138"}