{"id":164019,"name":null,"description":"Leveraging Structural Priors and Constraints for Cryo-EM Heterogeneous Reconstruction","url":"https://github.com/bytedance/cryostar","last_synced_at":"2025-09-09T19:17:57.375Z","repository":{"id":205784101,"uuid":"714948347","full_name":"bytedance/cryostar","owner":"bytedance","description":"Leveraging Structural Priors and Constraints for Cryo-EM Heterogeneous Reconstruction","archived":false,"fork":false,"pushed_at":"2024-11-04T07:42:06.000Z","size":1592,"stargazers_count":55,"open_issues_count":1,"forks_count":2,"subscribers_count":4,"default_branch":"main","last_synced_at":"2025-04-13T08:41:21.382Z","etag":null,"topics":["cryo-em","research"],"latest_commit_sha":null,"homepage":"https://bytedance.github.io/cryostar/","language":"Python","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"apache-2.0","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/bytedance.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null}},"created_at":"2023-11-06T07:15:26.000Z","updated_at":"2025-04-04T02:06:11.000Z","dependencies_parsed_at":"2023-11-20T06:26:34.816Z","dependency_job_id":"47e38243-6c70-4da5-bb95-38852242d80c","html_url":"https://github.com/bytedance/cryostar","commit_stats":null,"previous_names":["bytedance/cryostar"],"tags_count":0,"template":false,"template_full_name":null,"purl":"pkg:github/bytedance/cryostar","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/bytedance%2Fcryostar","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/bytedance%2Fcryostar/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/bytedance%2Fcryostar/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/bytedance%2Fcryostar/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/bytedance","download_url":"https://codeload.github.com/bytedance/cryostar/tar.gz/refs/heads/main","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/bytedance%2Fcryostar/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":274348181,"owners_count":25268972,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-09-09T02:00:10.223Z","response_time":80,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"owner":{"login":"bytedance","name":"Bytedance Inc.","uuid":"4158466","kind":"organization","description":"","email":null,"website":"https://opensource.bytedance.com","location":"Singapore","twitter":"ByteDanceOSS","company":null,"icon_url":"https://avatars.githubusercontent.com/u/4158466?v=4","repositories_count":255,"last_synced_at":"2024-04-16T02:59:18.813Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/bytedance","funding_links":[],"total_stars":88648,"followers":6017,"following":0,"created_at":"2022-11-13T11:29:28.707Z","updated_at":"2024-04-16T03:00:36.055Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/bytedance","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/bytedance/repositories"},"packages":[],"commits":{"id":5836651,"full_name":"bytedance/cryostar","default_branch":"master","committers":null,"total_commits":null,"total_committers":null,"total_bot_commits":null,"total_bot_committers":null,"mean_commits":null,"dds":null,"past_year_committers":null,"past_year_total_commits":null,"past_year_total_committers":null,"past_year_total_bot_commits":null,"past_year_total_bot_committers":null,"past_year_mean_commits":null,"past_year_dds":null,"last_synced_at":null,"last_synced_commit":null,"created_at":"2024-11-15T13:15:09.078Z","updated_at":"2024-11-15T13:15:09.078Z","commits_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories/bytedance%2Fcryostar/commits","host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-09T00:17:06.873Z","repositories_count":5534857,"commits_count":872733545,"contributors_count":32181212,"owners_count":918596,"icon_url":"https://github.com/github.png","host_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories"}},"issues_stats":{"full_name":"bytedance/cryostar","html_url":"https://github.com/bytedance/cryostar","last_synced_at":"2025-04-13T08:34:00.260Z","status":null,"issues_count":2,"pull_requests_count":1,"avg_time_to_close_issue":482424.0,"avg_time_to_close_pull_request":2897.0,"issues_closed_count":1,"pull_requests_closed_count":1,"pull_request_authors_count":1,"issue_authors_count":2,"avg_comments_per_issue":7.5,"avg_comments_per_pull_request":0.0,"merged_pull_requests_count":1,"bot_issues_count":0,"bot_pull_requests_count":0,"past_year_issues_count":0,"past_year_pull_requests_count":0,"past_year_avg_time_to_close_issue":null,"past_year_avg_time_to_close_pull_request":null,"past_year_issues_closed_count":0,"past_year_pull_requests_closed_count":0,"past_year_pull_request_authors_count":0,"past_year_issue_authors_count":0,"past_year_avg_comments_per_issue":null,"past_year_avg_comments_per_pull_request":null,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":0,"created_at":"2024-11-15T13:15:09.715Z","updated_at":"2025-09-01T07:42:05.233Z","repository_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/bytedance%2Fcryostar","issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/bytedance%2Fcryostar/issues","issue_labels_count":{},"pull_request_labels_count":{},"issue_author_associations_count":{"NONE":2},"pull_request_author_associations_count":{"COLLABORATOR":1},"issue_authors":{"kamzero":1,"PepperLee-sm":1},"pull_request_authors":{"dugu9sword":1},"host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-05T00:00:10.444Z","repositories_count":10098650,"issues_count":31447165,"pull_requests_count":97330651,"authors_count":10702032,"icon_url":"https://github.com/github.png","host_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories","owners_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/owners","authors_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors"},"past_year_issue_labels_count":{},"past_year_pull_request_labels_count":{},"past_year_issue_author_associations_count":{},"past_year_pull_request_author_associations_count":{},"past_year_issue_authors":{},"past_year_pull_request_authors":{},"maintainers":[{"login":"dugu9sword","count":1,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/dugu9sword"}],"active_maintainers":[]},"events":{"total":{"WatchEvent":22,"PushEvent":3,"ForkEvent":1},"last_year":{"WatchEvent":22,"PushEvent":3,"ForkEvent":1}},"keywords":["cryo-em","research"],"dependencies":[{"ecosystem":"pypi","filepath":"requirements.txt","sha":null,"kind":"manifest","created_at":"2023-11-06T13:52:06.800Z","updated_at":"2023-11-06T13:52:06.800Z","repository_link":"https://github.com/bytedance/cryostar/blob/main/requirements.txt","dependencies":[{"id":14325774890,"package_name":"einops","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":14325774891,"package_name":"torch","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":14325774892,"package_name":"numpy","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":14325774893,"package_name":"tqdm","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":14325774894,"package_name":"tabulate","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":14325774896,"package_name":"tensorboard","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":14325774898,"package_name":"matplotlib","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":14325774900,"package_name":"mrcfile","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":14325774905,"package_name":"biopython","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":14325774906,"package_name":"jupyterlab","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":14325774907,"package_name":"pandas","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":14325774908,"package_name":"starfile","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":14325774938,"package_name":"scipy","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":14325774939,"package_name":"biotite","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":14325775089,"package_name":"fastpdb","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":14325775510,"package_name":"lazy_loader","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":14325775511,"package_name":"dm-tree","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":14325775512,"package_name":"gemmi","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":14325775635,"package_name":"lightning","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":14325775636,"package_name":"mmengine","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":14325775637,"package_name":"nbqa","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":14325775699,"package_name":"autoflake","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":14325775700,"package_name":"isort","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":14325775701,"package_name":"yapf","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false}]},{"ecosystem":"pypi","filepath":"setup.py","sha":null,"kind":"manifest","created_at":"2023-11-06T13:52:07.396Z","updated_at":"2023-11-06T13:52:07.396Z","repository_link":"https://github.com/bytedance/cryostar/blob/main/setup.py","dependencies":[]}],"score":null,"created_at":"2025-09-09T01:06:29.579Z","updated_at":"2025-10-07T08:38:58.760Z","avatar_url":"https://github.com/bytedance.png","language":"Python","category":null,"sub_category":null,"monthly_downloads":0,"funding_links":[],"readme_doi_urls":["https://doi.org/10.1038/s41592-024-02486-1"],"works":{},"citation_counts":{},"total_citations":0,"keywords_from_contributors":[],"project_url":"https://science.ecosyste.ms/api/v1/projects/164019","html_url":"https://science.ecosyste.ms/projects/164019"}