{"id":164950,"name":null,"description":"Make Picrust2 Output Analysis and Visualization Easier","url":"https://github.com/cafferychen777/ggpicrust2","last_synced_at":"2025-09-09T19:37:44.507Z","repository":{"id":146916320,"uuid":"579335152","full_name":"cafferychen777/ggpicrust2","owner":"cafferychen777","description":"Make Picrust2 Output Analysis and Visualization Easier","archived":false,"fork":false,"pushed_at":"2025-09-04T04:17:36.000Z","size":25969,"stargazers_count":155,"open_issues_count":92,"forks_count":26,"subscribers_count":2,"default_branch":"main","last_synced_at":"2025-09-04T06:23:09.585Z","etag":null,"topics":["16s-rrna","bioinformatics","data-visualization","differential-abundance","functional-data","functional-prediction","ggplot2","gut-microbiome","kegg","metagenomic-analysis","metagenomics","microbiome","microbiota","pathway-analysis","phyloseq","picrust2","r","r-package","tax4fun2","visualization"],"latest_commit_sha":null,"homepage":"https://cafferychen777.github.io/ggpicrust2/","language":"R","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"other","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/cafferychen777.png","metadata":{"files":{"readme":"README.Rmd","changelog":"NEWS.md","contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null,"notice":null,"maintainers":null,"copyright":null,"agents":null,"dco":null,"cla":null}},"created_at":"2022-12-17T10:55:29.000Z","updated_at":"2025-09-04T04:17:40.000Z","dependencies_parsed_at":"2024-03-12T09:28:34.129Z","dependency_job_id":"6ed8a5aa-8b6f-4135-a573-ded43aacd775","html_url":"https://github.com/cafferychen777/ggpicrust2","commit_stats":null,"previous_names":[],"tags_count":12,"template":false,"template_full_name":null,"purl":"pkg:github/cafferychen777/ggpicrust2","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/cafferychen777%2Fggpicrust2","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/cafferychen777%2Fggpicrust2/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/cafferychen777%2Fggpicrust2/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/cafferychen777%2Fggpicrust2/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/cafferychen777","download_url":"https://codeload.github.com/cafferychen777/ggpicrust2/tar.gz/refs/heads/main","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/cafferychen777%2Fggpicrust2/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":274349396,"owners_count":25268979,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-09-09T02:00:10.223Z","response_time":80,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"owner":{"login":"cafferychen777","name":"Caffery Yang","uuid":"82987086","kind":"user","description":"Chen Yang is a junior at Southern Medical University majoring in biostatistics. In 2020-2021, he was awarded the National Scholarship from the Ministry of Educa","email":"","website":"www.cafferyyang.com","location":null,"twitter":"CafferyYang","company":null,"icon_url":"https://avatars.githubusercontent.com/u/82987086?u=ae9ec774a4abf7bd33d201593439a1e839db7ecf\u0026v=4","repositories_count":1,"last_synced_at":"2023-03-24T11:32:40.734Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/cafferychen777","funding_links":[],"total_stars":null,"followers":null,"following":null,"created_at":"2023-02-16T12:20:28.863Z","updated_at":"2023-03-24T11:32:40.765Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/cafferychen777","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/cafferychen777/repositories"},"packages":[{"id":6716274,"name":"ggpicrust2","ecosystem":"cran","description":"Make 'PICRUSt2' Output Analysis and Visualization Easier","homepage":"https://github.com/cafferychen777/ggpicrust2","licenses":"MIT + file LICENSE","normalized_licenses":["MIT"],"repository_url":"https://github.com/cafferychen777/ggpicrust2","keywords_array":[],"namespace":null,"versions_count":14,"first_release_published_at":"2023-03-24T00:00:00.000Z","latest_release_published_at":"2025-08-25T00:00:00.000Z","latest_release_number":"2.5.2","last_synced_at":"2025-09-04T06:35:55.337Z","created_at":"2023-03-24T17:10:21.620Z","updated_at":"2025-09-04T19:41:23.859Z","registry_url":"https://cran.r-project.org/package=ggpicrust2","install_command":null,"documentation_url":"http://cran.r-project.org/web/packages/ggpicrust2/ggpicrust2.pdf","metadata":{},"repo_metadata":{"id":146916320,"uuid":"579335152","full_name":"cafferychen777/ggpicrust2","owner":"cafferychen777","description":"Make Picrust2 Output Analysis and Visualization Easier","archived":false,"fork":false,"pushed_at":"2025-09-04T04:17:36.000Z","size":25969,"stargazers_count":155,"open_issues_count":92,"forks_count":26,"subscribers_count":2,"default_branch":"main","last_synced_at":"2025-09-04T06:23:09.585Z","etag":null,"topics":["16s-rrna","bioinformatics","data-visualization","differential-abundance","functional-data","functional-prediction","ggplot2","gut-microbiome","kegg","metagenomic-analysis","metagenomics","microbiome","microbiota","pathway-analysis","phyloseq","picrust2","r","r-package","tax4fun2","visualization"],"latest_commit_sha":null,"homepage":"https://cafferychen777.github.io/ggpicrust2/","language":"R","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"other","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/cafferychen777.png","metadata":{"files":{"readme":"README.Rmd","changelog":"NEWS.md","contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null,"notice":null,"maintainers":null,"copyright":null,"agents":null,"dco":null,"cla":null}},"created_at":"2022-12-17T10:55:29.000Z","updated_at":"2025-09-04T04:17:40.000Z","dependencies_parsed_at":"2024-03-12T09:28:34.129Z","dependency_job_id":"6ed8a5aa-8b6f-4135-a573-ded43aacd775","html_url":"https://github.com/cafferychen777/ggpicrust2","commit_stats":null,"previous_names":[],"tags_count":12,"template":false,"template_full_name":null,"purl":"pkg:github/cafferychen777/ggpicrust2","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/cafferychen777%2Fggpicrust2","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/cafferychen777%2Fggpicrust2/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/cafferychen777%2Fggpicrust2/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/cafferychen777%2Fggpicrust2/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/cafferychen777","download_url":"https://codeload.github.com/cafferychen777/ggpicrust2/tar.gz/refs/heads/main","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/cafferychen777%2Fggpicrust2/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":273664744,"owners_count":25146270,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-09-04T02:00:08.968Z","response_time":61,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"},"owner_record":{"login":"cafferychen777","name":"Caffery Yang","uuid":"82987086","kind":"user","description":"Chen Yang is a junior at Southern Medical University majoring in biostatistics. In 2020-2021, he was awarded the National Scholarship from the Ministry of Educa","email":"","website":"www.cafferyyang.com","location":null,"twitter":"CafferyYang","company":null,"icon_url":"https://avatars.githubusercontent.com/u/82987086?u=ae9ec774a4abf7bd33d201593439a1e839db7ecf\u0026v=4","repositories_count":1,"last_synced_at":"2023-03-24T11:32:40.734Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/cafferychen777","funding_links":[],"total_stars":null,"followers":null,"following":null,"created_at":"2023-02-16T12:20:28.863Z","updated_at":"2023-03-24T11:32:40.765Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/cafferychen777","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/cafferychen777/repositories"},"tags":[{"name":"v2.5.0","sha":"9943f592c183f2a2b941c75fccd8ee61b8c5aaf2","kind":"commit","published_at":"2025-08-19T17:46:34.000Z","download_url":"https://codeload.github.com/cafferychen777/ggpicrust2/tar.gz/v2.5.0","html_url":"https://github.com/cafferychen777/ggpicrust2/releases/tag/v2.5.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/cafferychen777/ggpicrust2@v2.5.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/cafferychen777%2Fggpicrust2/tags/v2.5.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/cafferychen777%2Fggpicrust2/tags/v2.5.0/manifests"},{"name":"v2.3.3","sha":"0473a3731610de0593b797c53d8dc335bfb04c51","kind":"tag","published_at":"2025-07-17T04:42:35.000Z","download_url":"https://codeload.github.com/cafferychen777/ggpicrust2/tar.gz/v2.3.3","html_url":"https://github.com/cafferychen777/ggpicrust2/releases/tag/v2.3.3","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/cafferychen777/ggpicrust2@v2.3.3","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/cafferychen777%2Fggpicrust2/tags/v2.3.3","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/cafferychen777%2Fggpicrust2/tags/v2.3.3/manifests"},{"name":"v2.3.2","sha":"c152f216b89aa224cd83f7ff6c25ebaea46eea77","kind":"commit","published_at":"2025-07-04T14:10:06.000Z","download_url":"https://codeload.github.com/cafferychen777/ggpicrust2/tar.gz/v2.3.2","html_url":"https://github.com/cafferychen777/ggpicrust2/releases/tag/v2.3.2","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/cafferychen777/ggpicrust2@v2.3.2","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/cafferychen777%2Fggpicrust2/tags/v2.3.2","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/cafferychen777%2Fggpicrust2/tags/v2.3.2/manifests"},{"name":"v2.1.1-test","sha":"8f7e96a3ceff1d784484186e3739fcb3fb091dc7","kind":"tag","published_at":"2025-04-10T14:25:36.000Z","download_url":"https://codeload.github.com/cafferychen777/ggpicrust2/tar.gz/v2.1.1-test","html_url":"https://github.com/cafferychen777/ggpicrust2/releases/tag/v2.1.1-test","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/cafferychen777/ggpicrust2@v2.1.1-test","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/cafferychen777%2Fggpicrust2/tags/v2.1.1-test","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/cafferychen777%2Fggpicrust2/tags/v2.1.1-test/manifests"},{"name":"ggpicrust2_1.7.1.tgz","sha":"3bc716e8457d3056ddf7508c22108391ecde348d","kind":"commit","published_at":"2023-06-07T11:42:45.000Z","download_url":"https://codeload.github.com/cafferychen777/ggpicrust2/tar.gz/ggpicrust2_1.7.1.tgz","html_url":"https://github.com/cafferychen777/ggpicrust2/releases/tag/ggpicrust2_1.7.1.tgz","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/cafferychen777/ggpicrust2@ggpicrust2_1.7.1.tgz","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/cafferychen777%2Fggpicrust2/tags/ggpicrust2_1.7.1.tgz","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/cafferychen777%2Fggpicrust2/tags/ggpicrust2_1.7.1.tgz/manifests"},{"name":"ggpicrust2_1.7.0.tgz","sha":"b1fbceb67132a8e3acc9ab3fb570b8fee6ecf4c3","kind":"commit","published_at":"2023-05-31T02:49:10.000Z","download_url":"https://codeload.github.com/cafferychen777/ggpicrust2/tar.gz/ggpicrust2_1.7.0.tgz","html_url":"https://github.com/cafferychen777/ggpicrust2/releases/tag/ggpicrust2_1.7.0.tgz","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/cafferychen777/ggpicrust2@ggpicrust2_1.7.0.tgz","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/cafferychen777%2Fggpicrust2/tags/ggpicrust2_1.7.0.tgz","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/cafferychen777%2Fggpicrust2/tags/ggpicrust2_1.7.0.tgz/manifests"},{"name":"ggpicrust2_1.6.0.tgz","sha":"51ad55732e73adcc7c9962acf6f253042f6caa68","kind":"commit","published_at":"2023-04-08T03:31:54.000Z","download_url":"https://codeload.github.com/cafferychen777/ggpicrust2/tar.gz/ggpicrust2_1.6.0.tgz","html_url":"https://github.com/cafferychen777/ggpicrust2/releases/tag/ggpicrust2_1.6.0.tgz","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/cafferychen777/ggpicrust2@ggpicrust2_1.6.0.tgz","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/cafferychen777%2Fggpicrust2/tags/ggpicrust2_1.6.0.tgz","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/cafferychen777%2Fggpicrust2/tags/ggpicrust2_1.6.0.tgz/manifests"},{"name":"ggpicrust2_1.5.1.tgz","sha":"11e1102be79411750b5c4010453698a537527eac","kind":"commit","published_at":"2023-04-05T03:42:23.000Z","download_url":"https://codeload.github.com/cafferychen777/ggpicrust2/tar.gz/ggpicrust2_1.5.1.tgz","html_url":"https://github.com/cafferychen777/ggpicrust2/releases/tag/ggpicrust2_1.5.1.tgz","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/cafferychen777/ggpicrust2@ggpicrust2_1.5.1.tgz","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/cafferychen777%2Fggpicrust2/tags/ggpicrust2_1.5.1.tgz","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/cafferychen777%2Fggpicrust2/tags/ggpicrust2_1.5.1.tgz/manifests"},{"name":"ggpicrust2_1.5.0.tgz","sha":"94dc89ea5349c234f55e1ea94719e3476816f77a","kind":"commit","published_at":"2023-04-04T13:23:35.000Z","download_url":"https://codeload.github.com/cafferychen777/ggpicrust2/tar.gz/ggpicrust2_1.5.0.tgz","html_url":"https://github.com/cafferychen777/ggpicrust2/releases/tag/ggpicrust2_1.5.0.tgz","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/cafferychen777/ggpicrust2@ggpicrust2_1.5.0.tgz","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/cafferychen777%2Fggpicrust2/tags/ggpicrust2_1.5.0.tgz","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/cafferychen777%2Fggpicrust2/tags/ggpicrust2_1.5.0.tgz/manifests"},{"name":"ggpicrust2_1.4.12.tgz","sha":"a13f1b830ee420c831d8fb226ec70c287f85eb15","kind":"commit","published_at":"2023-03-31T11:52:50.000Z","download_url":"https://codeload.github.com/cafferychen777/ggpicrust2/tar.gz/ggpicrust2_1.4.12.tgz","html_url":"https://github.com/cafferychen777/ggpicrust2/releases/tag/ggpicrust2_1.4.12.tgz","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/cafferychen777/ggpicrust2@ggpicrust2_1.4.12.tgz","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/cafferychen777%2Fggpicrust2/tags/ggpicrust2_1.4.12.tgz","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/cafferychen777%2Fggpicrust2/tags/ggpicrust2_1.4.12.tgz/manifests"},{"name":"ggpicrust2_1.4.9.tgz","sha":"aab03a9eac77ec1e96e2e984018ee52da14c5da9","kind":"commit","published_at":"2023-03-28T07:35:02.000Z","download_url":"https://codeload.github.com/cafferychen777/ggpicrust2/tar.gz/ggpicrust2_1.4.9.tgz","html_url":"https://github.com/cafferychen777/ggpicrust2/releases/tag/ggpicrust2_1.4.9.tgz","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/cafferychen777/ggpicrust2@ggpicrust2_1.4.9.tgz","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/cafferychen777%2Fggpicrust2/tags/ggpicrust2_1.4.9.tgz","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/cafferychen777%2Fggpicrust2/tags/ggpicrust2_1.4.9.tgz/manifests"},{"name":"ggpicrust2_1.3.0.tgz","sha":"e5b288087df1dd3952992b5b77a4f794e42d14bf","kind":"commit","published_at":"2023-03-08T12:14:58.000Z","download_url":"https://codeload.github.com/cafferychen777/ggpicrust2/tar.gz/ggpicrust2_1.3.0.tgz","html_url":"https://github.com/cafferychen777/ggpicrust2/releases/tag/ggpicrust2_1.3.0.tgz","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/cafferychen777/ggpicrust2@ggpicrust2_1.3.0.tgz","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/cafferychen777%2Fggpicrust2/tags/ggpicrust2_1.3.0.tgz","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/cafferychen777%2Fggpicrust2/tags/ggpicrust2_1.3.0.tgz/manifests"}]},"repo_metadata_updated_at":"2025-09-04T19:41:23.858Z","dependent_packages_count":0,"downloads":780,"downloads_period":"last-month","dependent_repos_count":0,"rankings":{"downloads":89.6791925318675,"dependent_repos_count":35.45467469080226,"dependent_packages_count":29.796711368051938,"stargazers_count":31.65426716580581,"forks_count":28.830024167180024,"average":43.08297398474151},"purl":"pkg:cran/ggpicrust2","advisories":[],"docker_usage_url":"https://docker.ecosyste.ms/usage/cran/ggpicrust2","docker_dependents_count":null,"docker_downloads_count":null,"usage_url":"https://repos.ecosyste.ms/usage/cran/ggpicrust2","dependent_repositories_url":"https://repos.ecosyste.ms/api/v1/usage/cran/ggpicrust2/dependencies","status":null,"funding_links":[],"critical":null,"issue_metadata":{"last_synced_at":"2025-08-31T09:55:50.482Z","issues_count":143,"pull_requests_count":10,"avg_time_to_close_issue":2341660.6785714286,"avg_time_to_close_pull_request":342391.125,"issues_closed_count":56,"pull_requests_closed_count":8,"pull_request_authors_count":7,"issue_authors_count":107,"avg_comments_per_issue":4.230769230769231,"avg_comments_per_pull_request":0.4,"merged_pull_requests_count":7,"bot_issues_count":0,"bot_pull_requests_count":1,"past_year_issues_count":46,"past_year_pull_requests_count":7,"past_year_avg_time_to_close_issue":260989.33333333334,"past_year_avg_time_to_close_pull_request":541862.2,"past_year_issues_closed_count":6,"past_year_pull_requests_closed_count":5,"past_year_pull_request_authors_count":4,"past_year_issue_authors_count":39,"past_year_avg_comments_per_issue":1.065217391304348,"past_year_avg_comments_per_pull_request":0.5714285714285714,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":4,"issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/cafferychen777%2Fggpicrust2/issues","maintainers":[{"login":"cafferychen777","count":4,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/cafferychen777"}],"active_maintainers":[{"login":"cafferychen777","count":1,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/cafferychen777"}]},"versions_url":"https://packages.ecosyste.ms/api/v1/registries/cran.r-project.org/packages/ggpicrust2/versions","version_numbers_url":"https://packages.ecosyste.ms/api/v1/registries/cran.r-project.org/packages/ggpicrust2/version_numbers","dependent_packages_url":"https://packages.ecosyste.ms/api/v1/registries/cran.r-project.org/packages/ggpicrust2/dependent_packages","related_packages_url":"https://packages.ecosyste.ms/api/v1/registries/cran.r-project.org/packages/ggpicrust2/related_packages","maintainers":[{"uuid":"cafferychen7850@gmail.com","login":null,"name":"Chen Yang","email":"cafferychen7850@gmail.com","url":null,"packages_count":1,"html_url":null,"role":null,"created_at":"2023-03-24T18:15:21.435Z","updated_at":"2023-03-24T18:15:21.435Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/cran.r-project.org/maintainers/cafferychen7850@gmail.com/packages"}],"registry":{"name":"cran.r-project.org","url":"https://cran.r-project.org","ecosystem":"cran","default":true,"packages_count":26212,"maintainers_count":14301,"namespaces_count":0,"keywords_count":8349,"github":"r-project-org","metadata":{"funded_packages_count":540},"icon_url":"https://github.com/r-project-org.png","created_at":"2022-04-06T16:32:25.637Z","updated_at":"2025-09-09T06:54:28.392Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/cran.r-project.org/packages","maintainers_url":"https://packages.ecosyste.ms/api/v1/registries/cran.r-project.org/maintainers","namespaces_url":"https://packages.ecosyste.ms/api/v1/registries/cran.r-project.org/namespaces"}}],"commits":{"id":8410424,"full_name":"cafferychen777/ggpicrust2","default_branch":"main","committers":[{"name":"Caffery Yang","email":"cafferychen7850@gmail.com","login":"cafferychen777","count":310},{"name":"allcontributors[bot]","email":"46447321+allcontributors[bot]","login":"allcontributors[bot]","count":2},{"name":"olivroy","email":"52606734+olivroy","login":"olivroy","count":1},{"name":"empirical-dreamer","email":"130329079+empirical-dreamer","login":"empirical-dreamer","count":1},{"name":"Pablo Jarrín-V.","email":"57812811+PJV-Ecu","login":"PJV-Ecu","count":1}],"total_commits":315,"total_committers":5,"total_bot_commits":2,"total_bot_committers":1,"mean_commits":63.0,"dds":0.015873015873015928,"past_year_committers":[{"name":"Chen Yang","email":"cafferychen777@tamu.edu","login":"cafferychen777","count":49},{"name":"empirical-dreamer","email":"130329079+empirical-dreamer","login":"empirical-dreamer","count":1},{"name":"Pablo Jarrín-V.","email":"57812811+PJV-Ecu","login":"PJV-Ecu","count":1}],"past_year_total_commits":51,"past_year_total_committers":3,"past_year_total_bot_commits":0,"past_year_total_bot_committers":0,"past_year_mean_commits":17.0,"past_year_dds":0.039215686274509776,"last_synced_at":"2025-05-19T07:01:47.567Z","last_synced_commit":"94be5ad0f88c12a8e8446bc296410473f43ee9bd","created_at":"2025-01-23T04:20:10.924Z","updated_at":"2025-05-19T07:02:10.525Z","commits_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories/cafferychen777%2Fggpicrust2/commits","host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-09T00:17:06.873Z","repositories_count":5535263,"commits_count":872887976,"contributors_count":32192420,"owners_count":918625,"icon_url":"https://github.com/github.png","host_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories"}},"issues_stats":{"full_name":"cafferychen777/ggpicrust2","html_url":"https://github.com/cafferychen777/ggpicrust2","last_synced_at":"2025-09-09T08:31:20.795Z","status":null,"issues_count":142,"pull_requests_count":10,"avg_time_to_close_issue":2349169.4423076925,"avg_time_to_close_pull_request":307657.1111111111,"issues_closed_count":52,"pull_requests_closed_count":9,"pull_request_authors_count":6,"issue_authors_count":106,"avg_comments_per_issue":3.3380281690140845,"avg_comments_per_pull_request":0.4,"merged_pull_requests_count":8,"bot_issues_count":0,"bot_pull_requests_count":1,"past_year_issues_count":51,"past_year_pull_requests_count":6,"past_year_avg_time_to_close_issue":204583.625,"past_year_avg_time_to_close_pull_request":541862.2,"past_year_issues_closed_count":8,"past_year_pull_requests_closed_count":5,"past_year_pull_request_authors_count":3,"past_year_issue_authors_count":43,"past_year_avg_comments_per_issue":0.5098039215686274,"past_year_avg_comments_per_pull_request":0.6666666666666666,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":4,"created_at":"2023-05-10T23:12:37.313Z","updated_at":"2025-09-09T08:31:20.797Z","repository_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/cafferychen777%2Fggpicrust2","issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/cafferychen777%2Fggpicrust2/issues","issue_labels_count":{"bug":43,"enhancement":5,"invalid":4,"duplicate":3,"documentation":3,"good first issue":3,"wontfix":1,"DESeq2":1,"factor-levels":1,"question":1},"pull_request_labels_count":{},"issue_author_associations_count":{"NONE":139,"OWNER":3},"pull_request_author_associations_count":{"NONE":5,"CONTRIBUTOR":4,"OWNER":1},"issue_authors":{"marwa38":6,"luozhy88":4,"RayKramp1":4,"Liviacmg":3,"andressamv":3,"BiggusDickus666":3,"Aristotle1992":3,"cafferychen777":3,"saassli21":2,"ShevchenkoAlla":2,"raqxavier":2,"antonkratz":2,"AbbiHern":2,"lixiaopi1985":2,"kriegerm":2,"GeoffreyOlweny":2,"Lacona":2,"jchmiel4":2,"otaviolovison":2,"lcamVz":2,"DaliBAmor":2,"mayagabitzsch":2,"SueFletcher":2,"bplet01":1,"etodd8":1,"Haper699":1,"carmennns2":1,"manijehmahdavi":1,"royparamita":1,"xinguo1236":1,"gaimingle10":1,"Valentin-Bio":1,"etorres475":1,"pig-raffles":1,"santi-zaragoza":1,"yliu3089":1,"jrhaulung":1,"kesava31":1,"PrincessTiabeanie":1,"leavittj":1,"Niyuh04":1,"Maffelatte":1,"ScarlettPegany":1,"athlql":1,"chung-wingko":1,"AMosca96":1,"benzodiazepines":1,"hharder1":1,"nteng22":1,"XingChengguang":1,"gaworj":1,"DeniRibicic":1,"Rainjie-afk":1,"lingvv":1,"christianrs5":1,"lananh-ngn":1,"camcecc":1,"rFkCnX":1,"alexiafabiani":1,"SRuwi":1,"WillErickson1":1,"andrewd789":1,"mccannpeter":1,"kestlermai":1,"nicharee22":1,"Selucote8223":1,"mwhite942":1,"PaulaEterovick":1,"shuqili":1,"weiGu-88":1,"xuan13hao":1,"Ching1995":1,"kaw97":1,"erda712":1,"gomong":1,"ZellaD":1,"JAkorli":1,"Sivonnehong":1,"SoniramDK":1,"ecouradeau":1,"ahiro26":1,"IloveUKarna":1,"mbrose2022":1,"irvinng98":1,"miunasah":1,"jw0531jung":1,"Elixir0822":1,"Sangita91":1,"luigallucci":1,"luomeng277":1,"ranfoxall":1,"freemutation":1,"daikin16":1,"microbiota2022":1,"npxhuy":1,"gam-references":1,"sarthorn":1,"KitHubb":1,"schuettl":1,"leimanao":1,"Geonhui-Kang":1,"UrielEspinoza":1,"erikpark":1,"JayalalKJ":1,"dgkurt":1,"microbialkim":1},"pull_request_authors":{"AbhishakeL":2,"PJV-Ecu":2,"empirical-dreamer":2,"olivroy":2,"allcontributors[bot]":1,"cafferychen777":1},"host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-09T00:00:11.778Z","repositories_count":10196513,"issues_count":32251144,"pull_requests_count":101784504,"authors_count":10740740,"icon_url":"https://github.com/github.png","host_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories","owners_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/owners","authors_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors"},"past_year_issue_labels_count":{"bug":26,"DESeq2":1,"factor-levels":1,"enhancement":1,"question":1},"past_year_pull_request_labels_count":{},"past_year_issue_author_associations_count":{"NONE":50,"OWNER":1},"past_year_pull_request_author_associations_count":{"NONE":4,"CONTRIBUTOR":2},"past_year_issue_authors":{"marwa38":5,"Liviacmg":3,"ShevchenkoAlla":2,"jchmiel4":2,"ahiro26":1,"Maffelatte":1,"microbiota2022":1,"miunasah":1,"mwhite942":1,"Niyuh04":1,"npxhuy":1,"nteng22":1,"ranfoxall":1,"rFkCnX":1,"royparamita":1,"Sangita91":1,"santi-zaragoza":1,"sarthorn":1,"shuqili":1,"Sivonnehong":1,"SoniramDK":1,"Valentin-Bio":1,"weiGu-88":1,"alexiafabiani":1,"AMosca96":1,"athlql":1,"BiggusDickus666":1,"cafferychen777":1,"Ching1995":1,"christianrs5":1,"daikin16":1,"ecouradeau":1,"gam-references":1,"Geonhui-Kang":1,"gomong":1,"Haper699":1,"irvinng98":1,"kesava31":1,"kriegerm":1,"Lacona":1,"leavittj":1,"leimanao":1,"luigallucci":1},"past_year_pull_request_authors":{"AbhishakeL":2,"PJV-Ecu":2,"empirical-dreamer":2},"maintainers":[{"login":"cafferychen777","count":4,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/cafferychen777"}],"active_maintainers":[{"login":"cafferychen777","count":1,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/cafferychen777"}]},"events":{"total":{"CreateEvent":3,"ReleaseEvent":2,"IssuesEvent":47,"WatchEvent":38,"IssueCommentEvent":140,"PushEvent":70,"GollumEvent":1,"PullRequestEvent":6,"ForkEvent":12},"last_year":{"CreateEvent":3,"ReleaseEvent":2,"IssuesEvent":47,"WatchEvent":38,"IssueCommentEvent":140,"PushEvent":70,"GollumEvent":1,"PullRequestEvent":6,"ForkEvent":12}},"keywords":["16s-rrna","bioinformatics","data-visualization","differential-abundance","functional-data","functional-prediction","ggplot2","gut-microbiome","kegg","metagenomic-analysis","metagenomics","microbiome","microbiota","pathway-analysis","phyloseq","picrust2","r","r-package","tax4fun2","visualization"],"dependencies":[{"ecosystem":"actions","filepath":".github/workflows/R-CMD-check.yaml","sha":null,"kind":"manifest","created_at":"2023-11-06T14:50:32.406Z","updated_at":"2023-11-06T14:50:32.406Z","repository_link":"https://github.com/cafferychen777/ggpicrust2/blob/main/.github/workflows/R-CMD-check.yaml","dependencies":[]},{"ecosystem":"actions","filepath":".github/workflows/pr-commands.yaml","sha":null,"kind":"manifest","created_at":"2023-11-06T14:50:32.419Z","updated_at":"2023-11-06T14:50:32.419Z","repository_link":"https://github.com/cafferychen777/ggpicrust2/blob/main/.github/workflows/pr-commands.yaml","dependencies":[{"id":14327137285,"package_name":"actions/checkout","ecosystem":"actions","requirements":"v3","direct":true,"kind":"composite","optional":false},{"id":14327137286,"package_name":"r-lib/actions/pr-fetch","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":14327137287,"package_name":"r-lib/actions/setup-r","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":14327137288,"package_name":"r-lib/actions/setup-r-dependencies","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":14327137289,"package_name":"r-lib/actions/pr-push","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false}]},{"ecosystem":"actions","filepath":".github/workflows/test-coverage.yaml","sha":null,"kind":"manifest","created_at":"2023-11-06T14:50:32.429Z","updated_at":"2023-11-06T14:50:32.429Z","repository_link":"https://github.com/cafferychen777/ggpicrust2/blob/main/.github/workflows/test-coverage.yaml","dependencies":[{"id":14327137290,"package_name":"actions/checkout","ecosystem":"actions","requirements":"v3","direct":true,"kind":"composite","optional":false},{"id":14327137291,"package_name":"r-lib/actions/setup-r","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":14327137292,"package_name":"r-lib/actions/setup-r-dependencies","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":14327137293,"package_name":"actions/upload-artifact","ecosystem":"actions","requirements":"v3","direct":true,"kind":"composite","optional":false}]},{"ecosystem":"cran","filepath":"DESCRIPTION","sha":null,"kind":"manifest","created_at":"2023-11-06T14:50:32.439Z","updated_at":"2023-11-06T14:50:32.439Z","repository_link":"https://github.com/cafferychen777/ggpicrust2/blob/main/DESCRIPTION","dependencies":[{"id":14327137294,"package_name":"R","ecosystem":"cran","requirements":"\u003e= 2.10","direct":true,"kind":"depends","optional":false},{"id":14327137295,"package_name":"ALDEx2","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":14327137296,"package_name":"aplot","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":14327138283,"package_name":"DESeq2","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":14327138493,"package_name":"dplyr","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":14327138494,"package_name":"edgeR","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":14327138495,"package_name":"GGally","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":14327138692,"package_name":"ggplot2","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":14327138695,"package_name":"grid","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":14327138698,"package_name":"ggh4x","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":14327139508,"package_name":"lefser","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":14327139509,"package_name":"limma","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":14327139510,"package_name":"Maaslin2","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":14327139511,"package_name":"metagenomeSeq","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":14327139512,"package_name":"MicrobiomeStat","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":14327139513,"package_name":"readr","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":14327139514,"package_name":"SummarizedExperiment","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":14327139515,"package_name":"tibble","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":14327139516,"package_name":"tidyr","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":14327139517,"package_name":"ggprism","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":14327139518,"package_name":"patchwork","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":14327139519,"package_name":"circlize","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":14327139520,"package_name":"Biobase","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":14327139521,"package_name":"KEGGREST","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":14327139522,"package_name":"ComplexHeatmap","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":14327139523,"package_name":"ggplotify","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":14327139524,"package_name":"BiocGenerics","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":14327139525,"package_name":"magrittr","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":14327139526,"package_name":"utils","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":14327139527,"package_name":"knitr","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":14327139528,"package_name":"rmarkdown","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false}]}],"score":13.779401398901763,"created_at":"2025-09-09T01:09:28.124Z","updated_at":"2025-10-07T08:39:07.110Z","avatar_url":"https://github.com/cafferychen777.png","language":"R","category":null,"sub_category":null,"monthly_downloads":780,"funding_links":[],"readme_doi_urls":["https://doi.org/10.1093/bioinformatics/btad470"],"works":{},"citation_counts":{},"total_citations":0,"keywords_from_contributors":["degoogle"],"project_url":"https://science.ecosyste.ms/api/v1/projects/164950","html_url":"https://science.ecosyste.ms/projects/164950"}