{"id":169997,"name":null,"description":"Python data analysis pipeline for single cell copy number event history reconstruction","url":"https://github.com/cbg-ethz/scdna-pipe","last_synced_at":"2025-09-09T21:17:39.807Z","repository":{"id":242873220,"uuid":"221738204","full_name":"cbg-ethz/scdna-pipe","owner":"cbg-ethz","description":"Python data analysis pipeline for single cell copy number event history reconstruction","archived":false,"fork":false,"pushed_at":"2024-05-29T12:57:27.000Z","size":17638,"stargazers_count":2,"open_issues_count":3,"forks_count":0,"subscribers_count":4,"default_branch":"master","last_synced_at":"2025-03-22T23:13:20.777Z","etag":null,"topics":["bioinformatics","bioinformatics-pipeline","data-analysis","genomics","python","snakemake","snakemake-workflows","workflow"],"latest_commit_sha":null,"homepage":"","language":"Python","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"apache-2.0","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/cbg-ethz.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2019-11-14T16:14:41.000Z","updated_at":"2024-06-05T10:55:55.000Z","dependencies_parsed_at":"2024-06-05T13:33:46.092Z","dependency_job_id":"d76d1218-e167-4560-8a9f-91c8fc17e4df","html_url":"https://github.com/cbg-ethz/scdna-pipe","commit_stats":null,"previous_names":["cbg-ethz/scdna-pipe"],"tags_count":1,"template":false,"template_full_name":null,"purl":"pkg:github/cbg-ethz/scdna-pipe","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/cbg-ethz%2Fscdna-pipe","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/cbg-ethz%2Fscdna-pipe/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/cbg-ethz%2Fscdna-pipe/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/cbg-ethz%2Fscdna-pipe/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/cbg-ethz","download_url":"https://codeload.github.com/cbg-ethz/scdna-pipe/tar.gz/refs/heads/master","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/cbg-ethz%2Fscdna-pipe/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":274365927,"owners_count":25272293,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-09-09T02:00:10.223Z","response_time":80,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"owner":{"login":"cbg-ethz","name":"Computational Biology Group (CBG)","uuid":"12068026","kind":"organization","description":"Beerenwinkel Lab at ETH Zurich","email":null,"website":"https://www.bsse.ethz.ch/cbg","location":"Basel, Switzerland","twitter":"cbg_ethz","company":null,"icon_url":"https://avatars.githubusercontent.com/u/12068026?v=4","repositories_count":91,"last_synced_at":"2024-03-26T08:09:56.763Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/cbg-ethz","funding_links":[],"total_stars":745,"followers":45,"following":0,"created_at":"2022-11-03T10:35:20.159Z","updated_at":"2024-03-26T08:10:12.972Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/cbg-ethz","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/cbg-ethz/repositories"},"packages":[],"commits":{"id":6098597,"full_name":"cbg-ethz/scdna-pipe","default_branch":"master","committers":null,"total_commits":null,"total_committers":null,"total_bot_commits":null,"total_bot_committers":null,"mean_commits":null,"dds":null,"past_year_committers":null,"past_year_total_commits":null,"past_year_total_committers":null,"past_year_total_bot_commits":null,"past_year_total_bot_committers":null,"past_year_mean_commits":null,"past_year_dds":null,"last_synced_at":null,"last_synced_commit":null,"created_at":"2024-11-17T08:32:32.312Z","updated_at":"2024-11-17T08:32:32.312Z","commits_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories/cbg-ethz%2Fscdna-pipe/commits","host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-09T00:17:06.873Z","repositories_count":5537895,"commits_count":874610347,"contributors_count":32275623,"owners_count":918967,"icon_url":"https://github.com/github.png","host_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories"}},"issues_stats":{"full_name":"cbg-ethz/scdna-pipe","html_url":"https://github.com/cbg-ethz/scdna-pipe","last_synced_at":"2025-03-22T23:13:26.229Z","status":null,"issues_count":9,"pull_requests_count":10,"avg_time_to_close_issue":12222271.6,"avg_time_to_close_pull_request":378302.2,"issues_closed_count":5,"pull_requests_closed_count":10,"pull_request_authors_count":2,"issue_authors_count":3,"avg_comments_per_issue":0.8888888888888888,"avg_comments_per_pull_request":0.3,"merged_pull_requests_count":9,"bot_issues_count":0,"bot_pull_requests_count":0,"past_year_issues_count":0,"past_year_pull_requests_count":0,"past_year_avg_time_to_close_issue":null,"past_year_avg_time_to_close_pull_request":null,"past_year_issues_closed_count":0,"past_year_pull_requests_closed_count":0,"past_year_pull_request_authors_count":0,"past_year_issue_authors_count":0,"past_year_avg_comments_per_issue":null,"past_year_avg_comments_per_pull_request":null,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":0,"created_at":"2024-11-17T08:32:32.578Z","updated_at":"2025-03-22T23:13:26.230Z","repository_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/cbg-ethz%2Fscdna-pipe","issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/cbg-ethz%2Fscdna-pipe/issues","issue_labels_count":{"urgent":1,"enhancement":1},"pull_request_labels_count":{},"issue_author_associations_count":{"MEMBER":7,"COLLABORATOR":1},"pull_request_author_associations_count":{"MEMBER":7,"COLLABORATOR":3},"issue_authors":{"pedrofale":6,"monicadragan":1,"anilbey":1},"pull_request_authors":{"pedrofale":7,"monicadragan":3},"host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-08T00:00:17.013Z","repositories_count":10172784,"issues_count":31935533,"pull_requests_count":100143235,"authors_count":10733238,"icon_url":"https://github.com/github.png","host_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories","owners_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/owners","authors_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors"},"past_year_issue_labels_count":{},"past_year_pull_request_labels_count":{},"past_year_issue_author_associations_count":{},"past_year_pull_request_author_associations_count":{},"past_year_issue_authors":{},"past_year_pull_request_authors":{},"maintainers":[{"login":"pedrofale","count":13,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/pedrofale"},{"login":"monicadragan","count":4,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/monicadragan"},{"login":"anilbey","count":1,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/anilbey"}],"active_maintainers":[]},"events":{"total":{},"last_year":{}},"keywords":["bioinformatics","bioinformatics-pipeline","data-analysis","genomics","python","snakemake","snakemake-workflows","workflow"],"dependencies":[],"score":null,"created_at":"2025-09-09T01:24:33.281Z","updated_at":"2025-10-07T08:39:46.126Z","avatar_url":"https://github.com/cbg-ethz.png","language":"Python","category":null,"sub_category":null,"monthly_downloads":0,"funding_links":[],"readme_doi_urls":[],"works":{},"citation_counts":{},"total_citations":0,"keywords_from_contributors":[],"project_url":"https://science.ecosyste.ms/api/v1/projects/169997","html_url":"https://science.ecosyste.ms/projects/169997"}