{"id":17702,"name":"integrating-diagenetic-equations-using-python","description":"Reactive-transport model simulating formation of limestone-marl alternations","url":"https://github.com/astro-turing/integrating-diagenetic-equations-using-python","last_synced_at":"2025-09-04T23:37:41.648Z","repository":{"id":65463763,"uuid":"511833027","full_name":"astro-turing/Integrating-diagenetic-equations-using-Python","owner":"astro-turing","description":"Reactive-transport model simulating formation of limestone-marl alternations","archived":false,"fork":false,"pushed_at":"2025-05-27T08:34:15.000Z","size":2130,"stargazers_count":0,"open_issues_count":11,"forks_count":1,"subscribers_count":3,"default_branch":"main","last_synced_at":"2025-05-27T08:47:45.274Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":"","language":"Python","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"apache-2.0","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/astro-turing.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":"CITATION.cff","codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null}},"created_at":"2022-07-08T09:11:01.000Z","updated_at":"2025-05-27T07:53:37.000Z","dependencies_parsed_at":"2024-06-05T09:31:29.293Z","dependency_job_id":"4c075176-2787-4226-a609-2ed4177f7607","html_url":"https://github.com/astro-turing/Integrating-diagenetic-equations-using-Python","commit_stats":null,"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"purl":"pkg:github/astro-turing/Integrating-diagenetic-equations-using-Python","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/astro-turing%2FIntegrating-diagenetic-equations-using-Python","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/astro-turing%2FIntegrating-diagenetic-equations-using-Python/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/astro-turing%2FIntegrating-diagenetic-equations-using-Python/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/astro-turing%2FIntegrating-diagenetic-equations-using-Python/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/astro-turing","download_url":"https://codeload.github.com/astro-turing/Integrating-diagenetic-equations-using-Python/tar.gz/refs/heads/main","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/astro-turing%2FIntegrating-diagenetic-equations-using-Python/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":273689738,"owners_count":25150628,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-09-04T02:00:08.968Z","response_time":61,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"owner":{"login":"astro-turing","name":"astro-turing","uuid":"107543691","kind":"organization","description":null,"email":null,"website":null,"location":null,"twitter":null,"company":null,"icon_url":"https://avatars.githubusercontent.com/u/107543691?v=4","repositories_count":4,"last_synced_at":"2023-03-30T11:02:49.582Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/astro-turing","funding_links":[],"total_stars":null,"followers":null,"following":null,"created_at":"2023-03-30T11:02:49.603Z","updated_at":"2023-03-30T11:02:49.603Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/astro-turing","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/astro-turing/repositories"},"packages":[],"commits":{"message":"Repository syncing started."},"issues_stats":{"full_name":"astro-turing/Integrating-diagenetic-equations-using-Python","html_url":"https://github.com/astro-turing/Integrating-diagenetic-equations-using-Python","last_synced_at":null,"status":null,"issues_count":null,"pull_requests_count":null,"avg_time_to_close_issue":null,"avg_time_to_close_pull_request":null,"issues_closed_count":null,"pull_requests_closed_count":null,"pull_request_authors_count":null,"issue_authors_count":null,"avg_comments_per_issue":null,"avg_comments_per_pull_request":null,"merged_pull_requests_count":null,"bot_issues_count":null,"bot_pull_requests_count":null,"past_year_issues_count":null,"past_year_pull_requests_count":null,"past_year_avg_time_to_close_issue":null,"past_year_avg_time_to_close_pull_request":null,"past_year_issues_closed_count":null,"past_year_pull_requests_closed_count":null,"past_year_pull_request_authors_count":null,"past_year_issue_authors_count":null,"past_year_avg_comments_per_issue":null,"past_year_avg_comments_per_pull_request":null,"past_year_bot_issues_count":null,"past_year_bot_pull_requests_count":null,"past_year_merged_pull_requests_count":null,"created_at":"2025-08-31T07:23:41.761Z","updated_at":"2025-09-02T05:47:51.576Z","repository_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/astro-turing%2FIntegrating-diagenetic-equations-using-Python","issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/astro-turing%2FIntegrating-diagenetic-equations-using-Python/issues","issue_labels_count":{"enhancement":1,"wontfix":1},"pull_request_labels_count":{"dependencies":3,"python":3},"issue_author_associations_count":{"CONTRIBUTOR":5},"pull_request_author_associations_count":{"CONTRIBUTOR":6,"NONE":1},"issue_authors":{"EmiliaJarochowska":3,"HannoSpreeuw":2},"pull_request_authors":{"HannoSpreeuw":4,"dependabot[bot]":3},"host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-04T00:00:25.939Z","repositories_count":10082405,"issues_count":31230170,"pull_requests_count":96100294,"authors_count":10694153,"icon_url":"https://github.com/github.png","host_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories","owners_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/owners","authors_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors"},"past_year_issue_labels_count":{},"past_year_pull_request_labels_count":{"dependencies":3,"python":3},"past_year_issue_author_associations_count":{},"past_year_pull_request_author_associations_count":{"CONTRIBUTOR":2,"NONE":1},"past_year_issue_authors":{},"past_year_pull_request_authors":{"dependabot[bot]":3},"maintainers":[],"active_maintainers":[]},"events":{"total":{"DeleteEvent":1,"IssueCommentEvent":1,"PushEvent":2,"PullRequestEvent":3,"CreateEvent":1},"last_year":{"DeleteEvent":1,"IssueCommentEvent":1,"PushEvent":2,"PullRequestEvent":3,"CreateEvent":1}},"keywords":[],"dependencies":[{"ecosystem":"pypi","filepath":"Pipfile","sha":null,"kind":"manifest","created_at":"2023-02-13T23:10:13.775Z","updated_at":"2023-02-13T23:10:13.775Z","repository_link":"https://github.com/astro-turing/Integrating-diagenetic-equations-using-Python/blob/main/Pipfile","dependencies":[{"id":7635251878,"package_name":"smop","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":7635251879,"package_name":"numpy","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":7635251880,"package_name":"ply","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":7635251881,"package_name":"networkx","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":7635251882,"package_name":"future","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":7635251883,"package_name":"matplotlib","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":7635251884,"package_name":"pytest","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":7635251885,"package_name":"scipy","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":7635251886,"package_name":"py-pde","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":7635251887,"package_name":"tqdm","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":7635251888,"package_name":"h5py","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false}]},{"ecosystem":"pypi","filepath":"Pipfile.lock","sha":null,"kind":"lockfile","created_at":"2023-02-13T23:10:13.793Z","updated_at":"2023-02-13T23:10:13.793Z","repository_link":"https://github.com/astro-turing/Integrating-diagenetic-equations-using-Python/blob/main/Pipfile.lock","dependencies":[{"id":7635251889,"package_name":"attrs","ecosystem":"pypi","requirements":"==22.1.0","direct":false,"kind":"runtime","optional":false},{"id":7635251890,"package_name":"contourpy","ecosystem":"pypi","requirements":"==1.0.6","direct":false,"kind":"runtime","optional":false},{"id":7635251891,"package_name":"cycler","ecosystem":"pypi","requirements":"==0.11.0","direct":false,"kind":"runtime","optional":false},{"id":7635251892,"package_name":"exceptiongroup","ecosystem":"pypi","requirements":"==1.0.4","direct":false,"kind":"runtime","optional":false},{"id":7635251893,"package_name":"fonttools","ecosystem":"pypi","requirements":"==4.38.0","direct":false,"kind":"runtime","optional":false},{"id":7635251894,"package_name":"future","ecosystem":"pypi","requirements":"==0.18.2","direct":false,"kind":"runtime","optional":false},{"id":7635251895,"package_name":"h5py","ecosystem":"pypi","requirements":"==3.7.0","direct":false,"kind":"runtime","optional":false},{"id":7635251896,"package_name":"iniconfig","ecosystem":"pypi","requirements":"==1.1.1","direct":false,"kind":"runtime","optional":false},{"id":7635251897,"package_name":"kiwisolver","ecosystem":"pypi","requirements":"==1.4.4","direct":false,"kind":"runtime","optional":false},{"id":7635251898,"package_name":"llvmlite","ecosystem":"pypi","requirements":"==0.39.1","direct":false,"kind":"runtime","optional":false},{"id":7635251899,"package_name":"matplotlib","ecosystem":"pypi","requirements":"==3.6.2","direct":false,"kind":"runtime","optional":false},{"id":7635251900,"package_name":"mpmath","ecosystem":"pypi","requirements":"==1.2.1","direct":false,"kind":"runtime","optional":false},{"id":7635251901,"package_name":"networkx","ecosystem":"pypi","requirements":"==2.8.8","direct":false,"kind":"runtime","optional":false},{"id":7635251902,"package_name":"numba","ecosystem":"pypi","requirements":"==0.56.4","direct":false,"kind":"runtime","optional":false},{"id":7635251903,"package_name":"numpy","ecosystem":"pypi","requirements":"==1.23.5","direct":false,"kind":"runtime","optional":false},{"id":7635251904,"package_name":"packaging","ecosystem":"pypi","requirements":"==21.3","direct":false,"kind":"runtime","optional":false},{"id":7635251905,"package_name":"pillow","ecosystem":"pypi","requirements":"==9.3.0","direct":false,"kind":"runtime","optional":false},{"id":7635251906,"package_name":"pluggy","ecosystem":"pypi","requirements":"==1.0.0","direct":false,"kind":"runtime","optional":false},{"id":7635251907,"package_name":"ply","ecosystem":"pypi","requirements":"==3.11","direct":false,"kind":"runtime","optional":false},{"id":7635251908,"package_name":"py-pde","ecosystem":"pypi","requirements":"==0.23.0","direct":false,"kind":"runtime","optional":false},{"id":7635251909,"package_name":"pyparsing","ecosystem":"pypi","requirements":"==3.0.9","direct":false,"kind":"runtime","optional":false},{"id":7635251910,"package_name":"pytest","ecosystem":"pypi","requirements":"==7.2.0","direct":false,"kind":"runtime","optional":false},{"id":7635251911,"package_name":"python-dateutil","ecosystem":"pypi","requirements":"==2.8.2","direct":false,"kind":"runtime","optional":false},{"id":7635251912,"package_name":"scipy","ecosystem":"pypi","requirements":"==1.9.3","direct":false,"kind":"runtime","optional":false},{"id":7635251913,"package_name":"setuptools","ecosystem":"pypi","requirements":"==65.6.0","direct":false,"kind":"runtime","optional":false},{"id":7635251914,"package_name":"six","ecosystem":"pypi","requirements":"==1.16.0","direct":false,"kind":"runtime","optional":false},{"id":7635251915,"package_name":"smop","ecosystem":"pypi","requirements":"==0.41","direct":false,"kind":"runtime","optional":false},{"id":7635251916,"package_name":"sympy","ecosystem":"pypi","requirements":"==1.11.1","direct":false,"kind":"runtime","optional":false},{"id":7635251917,"package_name":"tomli","ecosystem":"pypi","requirements":"==2.0.1","direct":false,"kind":"runtime","optional":false},{"id":7635251918,"package_name":"tqdm","ecosystem":"pypi","requirements":"==4.64.1","direct":false,"kind":"runtime","optional":false}]},{"ecosystem":"pypi","filepath":"poetry.lock","sha":null,"kind":"lockfile","created_at":"2023-02-13T23:10:13.838Z","updated_at":"2023-02-13T23:10:13.838Z","repository_link":"https://github.com/astro-turing/Integrating-diagenetic-equations-using-Python/blob/main/poetry.lock","dependencies":[{"id":7635251919,"package_name":"colorama","ecosystem":"pypi","requirements":"0.4.6","direct":false,"kind":"runtime","optional":false},{"id":7635251920,"package_name":"contourpy","ecosystem":"pypi","requirements":"1.0.6","direct":false,"kind":"runtime","optional":false},{"id":7635251921,"package_name":"cycler","ecosystem":"pypi","requirements":"0.11.0","direct":false,"kind":"runtime","optional":false},{"id":7635251922,"package_name":"fonttools","ecosystem":"pypi","requirements":"4.38.0","direct":false,"kind":"runtime","optional":false},{"id":7635251923,"package_name":"h5py","ecosystem":"pypi","requirements":"3.7.0","direct":false,"kind":"runtime","optional":false},{"id":7635251924,"package_name":"kiwisolver","ecosystem":"pypi","requirements":"1.4.4","direct":false,"kind":"runtime","optional":false},{"id":7635251925,"package_name":"llvmlite","ecosystem":"pypi","requirements":"0.39.1","direct":false,"kind":"runtime","optional":false},{"id":7635251926,"package_name":"matplotlib","ecosystem":"pypi","requirements":"3.6.2","direct":false,"kind":"runtime","optional":false},{"id":7635251927,"package_name":"mpmath","ecosystem":"pypi","requirements":"1.2.1","direct":false,"kind":"runtime","optional":false},{"id":7635251928,"package_name":"numba","ecosystem":"pypi","requirements":"0.56.4","direct":false,"kind":"runtime","optional":false},{"id":7635251929,"package_name":"numpy","ecosystem":"pypi","requirements":"1.23.5","direct":false,"kind":"runtime","optional":false},{"id":7635251930,"package_name":"packaging","ecosystem":"pypi","requirements":"21.3","direct":false,"kind":"runtime","optional":false},{"id":7635251931,"package_name":"pillow","ecosystem":"pypi","requirements":"9.3.0","direct":false,"kind":"runtime","optional":false},{"id":7635251932,"package_name":"py-pde","ecosystem":"pypi","requirements":"0.23.0","direct":false,"kind":"runtime","optional":false},{"id":7635251933,"package_name":"pyparsing","ecosystem":"pypi","requirements":"3.0.9","direct":false,"kind":"runtime","optional":false},{"id":7635251934,"package_name":"python-dateutil","ecosystem":"pypi","requirements":"2.8.2","direct":false,"kind":"runtime","optional":false},{"id":7635251935,"package_name":"scipy","ecosystem":"pypi","requirements":"1.9.3","direct":false,"kind":"runtime","optional":false},{"id":7635251936,"package_name":"setuptools-scm","ecosystem":"pypi","requirements":"7.0.5","direct":false,"kind":"runtime","optional":false},{"id":7635251937,"package_name":"six","ecosystem":"pypi","requirements":"1.16.0","direct":false,"kind":"runtime","optional":false},{"id":7635251938,"package_name":"sympy","ecosystem":"pypi","requirements":"1.11.1","direct":false,"kind":"runtime","optional":false},{"id":7635251939,"package_name":"tomli","ecosystem":"pypi","requirements":"2.0.1","direct":false,"kind":"runtime","optional":false},{"id":7635251940,"package_name":"tqdm","ecosystem":"pypi","requirements":"4.64.1","direct":false,"kind":"runtime","optional":false},{"id":7635251941,"package_name":"typing-extensions","ecosystem":"pypi","requirements":"4.4.0","direct":false,"kind":"runtime","optional":false}]},{"ecosystem":"pypi","filepath":"pyproject.toml","sha":null,"kind":"manifest","created_at":"2023-02-13T23:10:13.859Z","updated_at":"2023-02-13T23:10:13.859Z","repository_link":"https://github.com/astro-turing/Integrating-diagenetic-equations-using-Python/blob/main/pyproject.toml","dependencies":[{"id":7635251942,"package_name":"python","ecosystem":"pypi","requirements":"\u003e=3.10,\u003c3.12","direct":true,"kind":"runtime","optional":false},{"id":7635251943,"package_name":"py-pde","ecosystem":"pypi","requirements":"^0.23.0","direct":true,"kind":"runtime","optional":false},{"id":7635251944,"package_name":"tqdm","ecosystem":"pypi","requirements":"^4.64.1","direct":true,"kind":"runtime","optional":false},{"id":7635251945,"package_name":"numpy","ecosystem":"pypi","requirements":"^1.23.5","direct":true,"kind":"runtime","optional":false},{"id":7635251946,"package_name":"numba","ecosystem":"pypi","requirements":"^0.56.4","direct":true,"kind":"runtime","optional":false},{"id":7635251947,"package_name":"h5py","ecosystem":"pypi","requirements":"^3.7.0","direct":true,"kind":"runtime","optional":false}]},{"ecosystem":"actions","filepath":".github/workflows/python-app.yml","sha":null,"kind":"manifest","created_at":"2023-11-18T12:34:01.790Z","updated_at":"2023-11-18T12:34:01.790Z","repository_link":"https://github.com/astro-turing/Integrating-diagenetic-equations-using-Python/blob/main/.github/workflows/python-app.yml","dependencies":[{"id":14575344883,"package_name":"actions/checkout","ecosystem":"actions","requirements":"v3","direct":true,"kind":"composite","optional":false},{"id":14575344884,"package_name":"actions/setup-python","ecosystem":"actions","requirements":"v3","direct":true,"kind":"composite","optional":false}]}],"score":null,"created_at":"2025-09-04T15:50:48.829Z","updated_at":"2025-10-07T08:09:08.387Z","avatar_url":"https://github.com/astro-turing.png","language":"Python","category":null,"sub_category":null,"monthly_downloads":0,"funding_links":[],"readme_doi_urls":[],"works":{},"citation_counts":{},"total_citations":0,"keywords_from_contributors":[],"project_url":"https://science.ecosyste.ms/api/v1/projects/17702","html_url":"https://science.ecosyste.ms/projects/17702","bibtex_url":"https://science.ecosyste.ms/projects/17702/export.bibtex","apalike_url":"https://science.ecosyste.ms/projects/17702/export.apalike"}