{"id":18928,"name":"hetmatpy","description":"Python package for matrix storage and operations on hetnets","url":"https://github.com/hetio/hetmatpy","last_synced_at":"2025-09-05T00:08:32.037Z","repository":{"id":42442636,"uuid":"156592796","full_name":"hetio/hetmatpy","owner":"hetio","description":"Python package for matrix storage and operations on hetnets","archived":false,"fork":false,"pushed_at":"2023-03-30T12:46:22.000Z","size":1423,"stargazers_count":14,"open_issues_count":2,"forks_count":9,"subscribers_count":2,"default_branch":"main","last_synced_at":"2025-04-12T23:37:26.120Z","etag":null,"topics":["greenelab","hetio","hetmat","hetnet-connectivity-search","hetnets","matrix","numpy","python","scipy"],"latest_commit_sha":null,"homepage":"","language":"Python","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"other","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/hetio.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE.md","code_of_conduct":null,"threat_model":null,"audit":null,"citation":"CITATION.cff","codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null}},"created_at":"2018-11-07T18:46:12.000Z","updated_at":"2024-07-03T22:50:59.000Z","dependencies_parsed_at":"2023-02-16T19:00:27.466Z","dependency_job_id":"182ac4c1-a22c-4fec-ad1e-832447e62e8c","html_url":"https://github.com/hetio/hetmatpy","commit_stats":{"total_commits":125,"total_committers":6,"mean_commits":"20.833333333333332","dds":"0.29600000000000004","last_synced_commit":"5ada9c37980296b2594c2fa69dc6a5d215218d0c"},"previous_names":[],"tags_count":2,"template":false,"template_full_name":null,"purl":"pkg:github/hetio/hetmatpy","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/hetio%2Fhetmatpy","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/hetio%2Fhetmatpy/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/hetio%2Fhetmatpy/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/hetio%2Fhetmatpy/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/hetio","download_url":"https://codeload.github.com/hetio/hetmatpy/tar.gz/refs/heads/main","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/hetio%2Fhetmatpy/sbom","scorecard":{"id":462595,"data":{"date":"2025-08-11","repo":{"name":"github.com/hetio/hetmatpy","commit":"70042c387e2ff357213a99dc60754710a0f01e0a"},"scorecard":{"version":"v5.2.1-40-gf6ed084d","commit":"f6ed084d17c9236477efd66e5b258b9d4cc7b389"},"score":3.5,"checks":[{"name":"Dangerous-Workflow","score":10,"reason":"no dangerous workflow patterns detected","details":null,"documentation":{"short":"Determines if the project's GitHub Action workflows avoid dangerous patterns.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#dangerous-workflow"}},{"name":"Maintained","score":0,"reason":"0 commit(s) and 1 issue activity found in the last 90 days -- score normalized to 0","details":null,"documentation":{"short":"Determines if the project is \"actively maintained\".","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#maintained"}},{"name":"Binary-Artifacts","score":10,"reason":"no binaries found in the repo","details":null,"documentation":{"short":"Determines if the project has generated executable (binary) artifacts in the source repository.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#binary-artifacts"}},{"name":"Token-Permissions","score":0,"reason":"detected GitHub workflow tokens with excessive permissions","details":["Warn: no topLevel permission defined: .github/workflows/release.yaml:1","Warn: no topLevel permission defined: .github/workflows/test.yaml:1","Info: no jobLevel write permissions found"],"documentation":{"short":"Determines if the project's workflows follow the principle of least privilege.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#token-permissions"}},{"name":"Code-Review","score":1,"reason":"Found 4/28 approved changesets -- score normalized to 1","details":null,"documentation":{"short":"Determines if the project requires human code review before pull requests (aka merge requests) are merged.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#code-review"}},{"name":"Pinned-Dependencies","score":0,"reason":"dependency not pinned by hash detected -- score normalized to 0","details":["Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/release.yaml:12: update your workflow using https://app.stepsecurity.io/secureworkflow/hetio/hetmatpy/release.yaml/main?enable=pin","Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/release.yaml:14: update your workflow using https://app.stepsecurity.io/secureworkflow/hetio/hetmatpy/release.yaml/main?enable=pin","Warn: third-party GitHubAction not pinned by hash: .github/workflows/release.yaml:25: update your workflow using https://app.stepsecurity.io/secureworkflow/hetio/hetmatpy/release.yaml/main?enable=pin","Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/test.yaml:48: update your workflow using https://app.stepsecurity.io/secureworkflow/hetio/hetmatpy/test.yaml/main?enable=pin","Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/test.yaml:50: update your workflow using https://app.stepsecurity.io/secureworkflow/hetio/hetmatpy/test.yaml/main?enable=pin","Warn: third-party GitHubAction not pinned by hash: .github/workflows/test.yaml:62: update your workflow using https://app.stepsecurity.io/secureworkflow/hetio/hetmatpy/test.yaml/main?enable=pin","Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/test.yaml:20: update your workflow using https://app.stepsecurity.io/secureworkflow/hetio/hetmatpy/test.yaml/main?enable=pin","Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/test.yaml:22: update your workflow using https://app.stepsecurity.io/secureworkflow/hetio/hetmatpy/test.yaml/main?enable=pin","Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/test.yaml:37: update your workflow using https://app.stepsecurity.io/secureworkflow/hetio/hetmatpy/test.yaml/main?enable=pin","Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/test.yaml:39: update your workflow using https://app.stepsecurity.io/secureworkflow/hetio/hetmatpy/test.yaml/main?enable=pin","Warn: third-party GitHubAction not pinned by hash: .github/workflows/test.yaml:41: update your workflow using https://app.stepsecurity.io/secureworkflow/hetio/hetmatpy/test.yaml/main?enable=pin","Warn: pipCommand not pinned by hash: .github/workflows/release.yaml:19","Warn: pipCommand not pinned by hash: .github/workflows/release.yaml:20","Warn: pipCommand not pinned by hash: .github/workflows/test.yaml:53","Warn: pipCommand not pinned by hash: .github/workflows/test.yaml:54","Warn: pipCommand not pinned by hash: .github/workflows/test.yaml:27","Warn: pipCommand not pinned by hash: .github/workflows/test.yaml:28","Info:   0 out of   8 GitHub-owned GitHubAction dependencies pinned","Info:   0 out of   3 third-party GitHubAction dependencies pinned","Info:   0 out of   6 pipCommand dependencies pinned"],"documentation":{"short":"Determines if the project has declared and pinned the dependencies of its build process.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#pinned-dependencies"}},{"name":"CII-Best-Practices","score":0,"reason":"no effort to earn an OpenSSF best practices badge detected","details":null,"documentation":{"short":"Determines if the project has an OpenSSF (formerly CII) Best Practices Badge.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#cii-best-practices"}},{"name":"Security-Policy","score":0,"reason":"security policy file not detected","details":["Warn: no security policy file detected","Warn: no security file to analyze","Warn: no security file to analyze","Warn: no security file to analyze"],"documentation":{"short":"Determines if the project has published a security policy.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#security-policy"}},{"name":"Vulnerabilities","score":10,"reason":"0 existing vulnerabilities detected","details":null,"documentation":{"short":"Determines if the project has open, known unfixed vulnerabilities.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#vulnerabilities"}},{"name":"Fuzzing","score":0,"reason":"project is not fuzzed","details":["Warn: no fuzzer integrations found"],"documentation":{"short":"Determines if the project uses fuzzing.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#fuzzing"}},{"name":"License","score":9,"reason":"license file detected","details":["Info: project has a license file: LICENSE.md:0","Warn: project license file does not contain an FSF or OSI license."],"documentation":{"short":"Determines if the project has defined a license.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#license"}},{"name":"Packaging","score":-1,"reason":"packaging workflow not detected","details":["Warn: no GitHub/GitLab publishing workflow detected."],"documentation":{"short":"Determines if the project is published as a package that others can easily download, install, easily update, and uninstall.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#packaging"}},{"name":"Signed-Releases","score":-1,"reason":"no releases found","details":null,"documentation":{"short":"Determines if the project cryptographically signs release artifacts.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#signed-releases"}},{"name":"Branch-Protection","score":0,"reason":"branch protection not enabled on development/release branches","details":["Warn: branch protection not enabled for branch 'main'"],"documentation":{"short":"Determines if the default and release branches are protected with GitHub's branch protection settings.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#branch-protection"}},{"name":"SAST","score":0,"reason":"SAST tool is not run on all commits -- score normalized to 0","details":["Warn: 0 commits out of 16 are checked with a SAST tool"],"documentation":{"short":"Determines if the project uses static code analysis.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#sast"}}]},"last_synced_at":"2025-08-19T11:32:58.783Z","repository_id":42442636,"created_at":"2025-08-19T11:32:58.783Z","updated_at":"2025-08-19T11:32:58.783Z"},"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":273690685,"owners_count":25150636,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-09-04T02:00:08.968Z","response_time":61,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"owner":{"login":"hetio","name":"Hetnets in Biomedicine","uuid":"26744875","kind":"organization","description":"Repositories for hetnet-related research, tools, and datasets including Hetionet. By the teams of @dhimmel, @greenelab, \u0026 @sebaran","email":null,"website":"https://het.io","location":null,"twitter":null,"company":null,"icon_url":"https://avatars.githubusercontent.com/u/26744875?v=4","repositories_count":9,"last_synced_at":"2024-03-16T05:00:24.289Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/hetio","funding_links":[],"total_stars":367,"followers":null,"following":null,"created_at":"2023-02-25T06:33:01.568Z","updated_at":"2024-03-16T05:00:24.402Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/hetio","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/hetio/repositories"},"packages":[{"id":335612,"name":"hetmatpy","ecosystem":"pypi","description":"Matrix implementations for hetnets and path-count-based measures","homepage":"https://het.io/software/","licenses":"# BSD-2-Clause Plus Patent License  _Copyright © 2016–2020, Contributors, the Greene Lab at the University of Pennsylvania, and the Sullivan Lab at North Carolina State University_\u003cbr\u003e  Redistribution and use in source and binary forms, with or without modification, are permitted provided that the following conditions are met:  1. Redistributions of source code must retain the above copyright notice, this list of conditions and the following disclaimer.  2. Redistributions in binary form must reproduce the above copyright notice, this list of conditions and the following disclaimer in the documentation and/or other materials provided with the distribution.  Subject to the terms and conditions of this license, each copyright holder and contributor hereby grants to those receiving rights under this license a perpetual, worldwide, non-exclusive, no-charge, royalty-free, irrevocable (except for failure to satisfy the conditions of this license) patent license to make, have made, use, offer to sell, sell, import, and otherwise transfer this software, where such license applies only to those patent claims, already acquired or hereafter acquired, licensable by such copyright holder or contributor that are necessarily infringed by:  (a) their Contribution(s) (the licensed copyrights of copyright holders and non-copyrightable additions of contributors, in source or binary form) alone; or  (b) combination of their Contribution(s) with the work of authorship to which such Contribution(s) was added by such copyright holder or contributor, if, at the time the Contribution is added, such addition causes such combination to be necessarily infringed. The patent license shall not apply to any other combinations which include the Contribution.  Except as expressly stated above, no rights or licenses from any copyright holder or contributor is granted under this license, whether expressly, by implication, estoppel or otherwise.  DISCLAIMER  THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS \"AS IS\" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. ","normalized_licenses":["Other"],"repository_url":"https://github.com/hetio/hetmatpy","keywords_array":["hetnet","hetmat","graph","heterogeneous","network","hetio","hetnetpy","dwpc","numpy"],"namespace":null,"versions_count":2,"first_release_published_at":"2020-05-27T19:39:38.000Z","latest_release_published_at":"2022-04-05T22:57:35.000Z","latest_release_number":"0.1.0","last_synced_at":"2025-08-30T06:02:43.579Z","created_at":"2022-04-06T12:43:01.556Z","updated_at":"2025-08-30T06:02:43.579Z","registry_url":"https://pypi.org/project/hetmatpy/","install_command":"pip install hetmatpy --index-url https://pypi.org/simple","documentation_url":"https://hetio.github.io/hetmatpy","metadata":{"funding":null,"documentation":"https://hetio.github.io/hetmatpy","classifiers":["Intended Audience :: Science/Research","Topic :: Scientific/Engineering :: Bio-Informatics","Topic :: Scientific/Engineering :: Information Analysis"],"normalized_name":"hetmatpy","project_status":null},"repo_metadata":{"id":42442636,"uuid":"156592796","full_name":"hetio/hetmatpy","owner":"hetio","description":"Python package for matrix storage and operations on hetnets","archived":false,"fork":false,"pushed_at":"2023-03-30T12:46:22.000Z","size":1423,"stargazers_count":14,"open_issues_count":2,"forks_count":9,"subscribers_count":3,"default_branch":"main","last_synced_at":"2024-07-06T18:20:52.757Z","etag":null,"topics":["greenelab","hetio","hetmat","hetnet-connectivity-search","hetnets","matrix","numpy","python","scipy"],"latest_commit_sha":null,"homepage":"","language":"Python","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"other","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/hetio.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE.md","code_of_conduct":null,"threat_model":null,"audit":null,"citation":"CITATION.cff","codeowners":null,"security":null,"support":null,"governance":null}},"created_at":"2018-11-07T18:46:12.000Z","updated_at":"2024-07-03T22:50:59.000Z","dependencies_parsed_at":"2023-02-16T19:00:27.466Z","dependency_job_id":"182ac4c1-a22c-4fec-ad1e-832447e62e8c","html_url":"https://github.com/hetio/hetmatpy","commit_stats":{"total_commits":125,"total_committers":6,"mean_commits":"20.833333333333332","dds":"0.29600000000000004","last_synced_commit":"5ada9c37980296b2594c2fa69dc6a5d215218d0c"},"previous_names":[],"tags_count":2,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/hetio%2Fhetmatpy","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/hetio%2Fhetmatpy/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/hetio%2Fhetmatpy/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/hetio%2Fhetmatpy/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/hetio","download_url":"https://codeload.github.com/hetio/hetmatpy/tar.gz/refs/heads/main","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":214788289,"owners_count":15784899,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"},"owner_record":{"login":"hetio","name":"Hetnets in Biomedicine","uuid":"26744875","kind":"organization","description":"Repositories for hetnet-related research, tools, and datasets including Hetionet. By the teams of @dhimmel, @greenelab, \u0026 @sebaran","email":null,"website":"https://het.io","location":null,"twitter":null,"company":null,"icon_url":"https://avatars.githubusercontent.com/u/26744875?v=4","repositories_count":9,"last_synced_at":"2024-03-16T05:00:24.289Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/hetio","funding_links":[],"total_stars":367,"followers":null,"following":null,"created_at":"2023-02-25T06:33:01.568Z","updated_at":"2024-03-16T05:00:24.402Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/hetio","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/hetio/repositories"},"tags":[{"name":"v0.1.0","sha":"3a426ccbcf63b27911e43be5ff305a3968224439","kind":"commit","published_at":"2022-04-05T22:53:04.000Z","download_url":"https://codeload.github.com/hetio/hetmatpy/tar.gz/v0.1.0","html_url":"https://github.com/hetio/hetmatpy/releases/tag/v0.1.0","dependencies_parsed_at":null,"dependency_job_id":null,"tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/hetio%2Fhetmatpy/tags/v0.1.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/hetio%2Fhetmatpy/tags/v0.1.0/manifests"},{"name":"v0.0.0","sha":"bc36aa9859c43a1a5fb22808cd6eb952ef9d497c","kind":"commit","published_at":"2020-05-27T19:17:56.000Z","download_url":"https://codeload.github.com/hetio/hetmatpy/tar.gz/v0.0.0","html_url":"https://github.com/hetio/hetmatpy/releases/tag/v0.0.0","dependencies_parsed_at":null,"dependency_job_id":null,"tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/hetio%2Fhetmatpy/tags/v0.0.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/hetio%2Fhetmatpy/tags/v0.0.0/manifests"}]},"repo_metadata_updated_at":"2024-08-10T11:35:41.526Z","dependent_packages_count":0,"downloads":49,"downloads_period":"last-month","dependent_repos_count":1,"rankings":{"downloads":53.31082036639949,"dependent_repos_count":21.64168977689945,"dependent_packages_count":10.051680376746889,"stargazers_count":16.00918851359357,"forks_count":10.899524695026976,"docker_downloads_count":null,"average":22.382580745733275},"purl":"pkg:pypi/hetmatpy","advisories":[],"docker_usage_url":"https://docker.ecosyste.ms/usage/pypi/hetmatpy","docker_dependents_count":null,"docker_downloads_count":null,"usage_url":"https://repos.ecosyste.ms/usage/pypi/hetmatpy","dependent_repositories_url":"https://repos.ecosyste.ms/api/v1/usage/pypi/hetmatpy/dependencies","status":null,"funding_links":[],"critical":null,"issue_metadata":{"last_synced_at":"2024-07-06T18:20:47.432Z","issues_count":3,"pull_requests_count":16,"avg_time_to_close_issue":1021886.0,"avg_time_to_close_pull_request":163940.125,"issues_closed_count":1,"pull_requests_closed_count":16,"pull_request_authors_count":3,"issue_authors_count":2,"avg_comments_per_issue":1.0,"avg_comments_per_pull_request":0.5625,"merged_pull_requests_count":16,"bot_issues_count":0,"bot_pull_requests_count":0,"past_year_issues_count":0,"past_year_pull_requests_count":0,"past_year_avg_time_to_close_issue":null,"past_year_avg_time_to_close_pull_request":null,"past_year_issues_closed_count":0,"past_year_pull_requests_closed_count":0,"past_year_pull_request_authors_count":0,"past_year_issue_authors_count":0,"past_year_avg_comments_per_issue":null,"past_year_avg_comments_per_pull_request":null,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":0,"issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/hetio%2Fhetmatpy/issues","maintainers":[{"login":"dhimmel","count":14,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/dhimmel"}],"active_maintainers":[]},"versions_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/packages/hetmatpy/versions","version_numbers_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/packages/hetmatpy/version_numbers","dependent_packages_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/packages/hetmatpy/dependent_packages","related_packages_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/packages/hetmatpy/related_packages","maintainers":[{"uuid":"dhimmel","login":"dhimmel","name":null,"email":null,"url":null,"packages_count":6,"html_url":"https://pypi.org/user/dhimmel/","role":null,"created_at":"2023-02-23T15:14:55.240Z","updated_at":"2023-02-23T15:14:55.240Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/maintainers/dhimmel/packages"}],"registry":{"name":"pypi.org","url":"https://pypi.org","ecosystem":"pypi","default":true,"packages_count":724934,"maintainers_count":308263,"namespaces_count":0,"keywords_count":237984,"github":"pypi","metadata":{"funded_packages_count":50481},"icon_url":"https://github.com/pypi.png","created_at":"2022-04-04T15:19:23.364Z","updated_at":"2025-09-04T05:23:51.177Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/packages","maintainers_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/maintainers","namespaces_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/namespaces"}}],"commits":{"id":527630,"full_name":"hetio/hetmatpy","default_branch":"main","committers":[{"name":"Daniel Himmelstein","email":"daniel.himmelstein@gmail.com","login":null,"count":90},{"name":"Michael Zietz","email":"michael.zietz@gmail.com","login":null,"count":23},{"name":"Kyle Kloster","email":"kkloste","login":"kkloste","count":5},{"name":"Kyle Kloster","email":"kyle.kloster@gmail.com","login":null,"count":4},{"name":"Ben Heil","email":"ben.jer.heil@gmail.com","login":null,"count":3},{"name":"Greg Way","email":"gregory.way@gmail.com","login":null,"count":2}],"total_commits":127,"total_committers":6,"total_bot_commits":0,"total_bot_committers":0,"mean_commits":21.166666666666668,"dds":0.2913385826771654,"past_year_committers":[],"past_year_total_commits":0,"past_year_total_committers":0,"past_year_total_bot_commits":0,"past_year_total_bot_committers":0,"past_year_mean_commits":0.0,"past_year_dds":0.0,"last_synced_at":"2024-10-21T15:19:56.240Z","last_synced_commit":"70042c387e2ff357213a99dc60754710a0f01e0a","created_at":"2023-03-09T03:37:29.276Z","updated_at":"2024-10-21T15:19:56.241Z","commits_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories/hetio%2Fhetmatpy/commits","host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-05T00:00:10.343Z","repositories_count":5480019,"commits_count":853389012,"contributors_count":31098138,"owners_count":906558,"icon_url":"https://github.com/github.png","host_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories"}},"issues_stats":{"full_name":"hetio/hetmatpy","html_url":"https://github.com/hetio/hetmatpy","last_synced_at":"2025-04-12T23:36:43.375Z","status":null,"issues_count":3,"pull_requests_count":16,"avg_time_to_close_issue":1021886.0,"avg_time_to_close_pull_request":163940.125,"issues_closed_count":1,"pull_requests_closed_count":16,"pull_request_authors_count":3,"issue_authors_count":2,"avg_comments_per_issue":1.0,"avg_comments_per_pull_request":0.5625,"merged_pull_requests_count":16,"bot_issues_count":0,"bot_pull_requests_count":0,"past_year_issues_count":0,"past_year_pull_requests_count":0,"past_year_avg_time_to_close_issue":null,"past_year_avg_time_to_close_pull_request":null,"past_year_issues_closed_count":0,"past_year_pull_requests_closed_count":0,"past_year_pull_request_authors_count":0,"past_year_issue_authors_count":0,"past_year_avg_comments_per_issue":null,"past_year_avg_comments_per_pull_request":null,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":0,"created_at":"2023-05-14T08:03:54.735Z","updated_at":"2025-08-31T06:54:48.692Z","repository_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/hetio%2Fhetmatpy","issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/hetio%2Fhetmatpy/issues","issue_labels_count":{},"pull_request_labels_count":{},"issue_author_associations_count":{"MEMBER":2,"NONE":2},"pull_request_author_associations_count":{"MEMBER":12,"CONTRIBUTOR":4},"issue_authors":{"dhimmel":2,"Travis-Barton":1,"dgoncalo":1},"pull_request_authors":{"dhimmel":12,"ben-heil":3,"zietzm":1},"host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-01T00:00:07.725Z","repositories_count":9917002,"issues_count":29224957,"pull_requests_count":83952544,"authors_count":9027317,"icon_url":"https://github.com/github.png","host_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories","owners_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/owners","authors_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors"},"past_year_issue_labels_count":{},"past_year_pull_request_labels_count":{},"past_year_issue_author_associations_count":{"NONE":1},"past_year_pull_request_author_associations_count":{},"past_year_issue_authors":{"dgoncalo":1},"past_year_pull_request_authors":{},"maintainers":[{"login":"dhimmel","count":14,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/dhimmel"}],"active_maintainers":[]},"events":{"total":{"IssuesEvent":1,"WatchEvent":1,"ForkEvent":1},"last_year":{"IssuesEvent":1,"WatchEvent":1,"ForkEvent":1}},"keywords":["greenelab","hetio","hetmat","hetnet-connectivity-search","hetnets","matrix","numpy","python","scipy"],"dependencies":[{"ecosystem":"actions","filepath":".github/workflows/release.yaml","sha":null,"kind":"manifest","created_at":"2023-02-16T19:00:27.112Z","updated_at":"2023-02-16T19:00:27.112Z","repository_link":"https://github.com/hetio/hetmatpy/blob/main/.github/workflows/release.yaml","dependencies":[{"id":7721439148,"package_name":"actions/checkout","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":7721439149,"package_name":"actions/setup-python","ecosystem":"actions","requirements":"v3","direct":true,"kind":"composite","optional":false},{"id":7721439150,"package_name":"pypa/gh-action-pypi-publish","ecosystem":"actions","requirements":"release/v1","direct":true,"kind":"composite","optional":false}]},{"ecosystem":"actions","filepath":".github/workflows/test.yaml","sha":null,"kind":"manifest","created_at":"2023-02-16T19:00:27.153Z","updated_at":"2023-02-16T19:00:27.153Z","repository_link":"https://github.com/hetio/hetmatpy/blob/main/.github/workflows/test.yaml","dependencies":[{"id":7721439153,"package_name":"actions/checkout","ecosystem":"actions","requirements":"v3","direct":true,"kind":"composite","optional":false},{"id":7721439154,"package_name":"actions/setup-python","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":7721439155,"package_name":"actions/setup-python","ecosystem":"actions","requirements":"v3","direct":true,"kind":"composite","optional":false},{"id":7721439156,"package_name":"pre-commit/action","ecosystem":"actions","requirements":"v2.0.3","direct":true,"kind":"composite","optional":false},{"id":7721439157,"package_name":"peaceiris/actions-gh-pages","ecosystem":"actions","requirements":"v3","direct":true,"kind":"composite","optional":false}]},{"ecosystem":"pypi","filepath":"pyproject.toml","sha":null,"kind":"manifest","created_at":"2023-02-16T19:00:27.223Z","updated_at":"2023-02-16T19:00:27.223Z","repository_link":"https://github.com/hetio/hetmatpy/blob/main/pyproject.toml","dependencies":[{"id":7721439158,"package_name":"hetnetpy","ecosystem":"pypi","requirements":"\u003e=0.3.0","direct":true,"kind":"runtime","optional":false},{"id":7721439159,"package_name":"numpy","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":7721439160,"package_name":"pandas","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":7721439163,"package_name":"scipy","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false}]}],"score":8.496173824192162,"created_at":"2025-09-04T15:50:50.221Z","updated_at":"2025-10-07T08:09:31.686Z","avatar_url":"https://github.com/hetio.png","language":"Python","category":null,"sub_category":null,"monthly_downloads":49,"funding_links":[],"readme_doi_urls":[],"works":{},"citation_counts":{},"total_citations":0,"keywords_from_contributors":["edge-prediction","heterogeneous-network","hetnet","rephetio","dwpcs","networks"],"project_url":"https://science.ecosyste.ms/api/v1/projects/18928","html_url":"https://science.ecosyste.ms/projects/18928","bibtex_url":"https://science.ecosyste.ms/projects/18928/export.bibtex","apalike_url":"https://science.ecosyste.ms/projects/18928/export.apalike"}