{"id":21403,"name":"openddm","description":null,"url":"https://github.com/koenderinklab/openddm","last_synced_at":"2025-09-05T00:58:05.855Z","repository":{"id":36950968,"uuid":"492720195","full_name":"koenderinklab/OpenDDM","owner":"koenderinklab","description":null,"archived":false,"fork":false,"pushed_at":"2023-04-05T20:54:49.000Z","size":53344,"stargazers_count":3,"open_issues_count":16,"forks_count":2,"subscribers_count":1,"default_branch":"master","last_synced_at":"2025-04-14T12:48:05.659Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":"https://koenderinklab.github.io/OpenDDM/","language":"Jupyter Notebook","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"apache-2.0","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/koenderinklab.png","metadata":{"files":{"readme":"README.md","changelog":"CHANGELOG.md","contributing":"CONTRIBUTING.md","funding":null,"license":"LICENSE","code_of_conduct":"CODE_OF_CONDUCT.md","threat_model":null,"audit":null,"citation":"CITATION.cff","codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null}},"created_at":"2022-05-16T07:05:08.000Z","updated_at":"2023-01-19T10:12:25.000Z","dependencies_parsed_at":"2025-04-13T03:39:19.027Z","dependency_job_id":null,"html_url":"https://github.com/koenderinklab/OpenDDM","commit_stats":null,"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"purl":"pkg:github/koenderinklab/OpenDDM","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/koenderinklab%2FOpenDDM","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/koenderinklab%2FOpenDDM/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/koenderinklab%2FOpenDDM/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/koenderinklab%2FOpenDDM/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/koenderinklab","download_url":"https://codeload.github.com/koenderinklab/OpenDDM/tar.gz/refs/heads/master","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/koenderinklab%2FOpenDDM/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":273695260,"owners_count":25151485,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-09-04T02:00:08.968Z","response_time":61,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"owner":{"login":"koenderinklab","name":"Biological Soft Matter","uuid":"105420188","kind":"organization","description":"","email":null,"website":"https://www.tudelft.nl/tnw/over-faculteit/afdelingen/bionanoscience/research/research-labs/koenderink-lab","location":null,"twitter":null,"company":null,"icon_url":"https://avatars.githubusercontent.com/u/105420188?v=4","repositories_count":1,"last_synced_at":"2023-03-03T19:31:40.119Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/koenderinklab","funding_links":[],"total_stars":null,"followers":null,"following":null,"created_at":"2022-11-14T05:03:59.211Z","updated_at":"2023-03-03T19:31:40.294Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/koenderinklab","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/koenderinklab/repositories"},"packages":[],"commits":{"message":"Repository syncing started."},"issues_stats":{"full_name":"koenderinklab/openddm","html_url":"https://github.com/koenderinklab/openddm","last_synced_at":null,"status":null,"issues_count":null,"pull_requests_count":null,"avg_time_to_close_issue":null,"avg_time_to_close_pull_request":null,"issues_closed_count":null,"pull_requests_closed_count":null,"pull_request_authors_count":null,"issue_authors_count":null,"avg_comments_per_issue":null,"avg_comments_per_pull_request":null,"merged_pull_requests_count":null,"bot_issues_count":null,"bot_pull_requests_count":null,"past_year_issues_count":null,"past_year_pull_requests_count":null,"past_year_avg_time_to_close_issue":null,"past_year_avg_time_to_close_pull_request":null,"past_year_issues_closed_count":null,"past_year_pull_requests_closed_count":null,"past_year_pull_request_authors_count":null,"past_year_issue_authors_count":null,"past_year_avg_comments_per_issue":null,"past_year_avg_comments_per_pull_request":null,"past_year_bot_issues_count":null,"past_year_bot_pull_requests_count":null,"past_year_merged_pull_requests_count":null,"created_at":"2025-09-05T00:56:59.822Z","updated_at":"2025-09-05T00:56:59.822Z","repository_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/koenderinklab%2Fopenddm","issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/koenderinklab%2Fopenddm/issues","issue_labels_count":{},"pull_request_labels_count":{},"issue_author_associations_count":{},"pull_request_author_associations_count":{},"issue_authors":{},"pull_request_authors":{},"host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-05T00:00:10.444Z","repositories_count":10082304,"issues_count":31220387,"pull_requests_count":96069062,"authors_count":10694175,"icon_url":"https://github.com/github.png","host_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories","owners_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/owners","authors_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors"},"past_year_issue_labels_count":{},"past_year_pull_request_labels_count":{},"past_year_issue_author_associations_count":{},"past_year_pull_request_author_associations_count":{},"past_year_issue_authors":{},"past_year_pull_request_authors":{},"maintainers":[],"active_maintainers":[]},"events":{"total":{},"last_year":{}},"keywords":[],"dependencies":[{"ecosystem":"actions","filepath":".github/workflows/CI_build.yml","sha":null,"kind":"manifest","created_at":"2023-01-17T07:45:57.483Z","updated_at":"2023-01-17T07:45:57.483Z","repository_link":"https://github.com/koenderinklab/OpenDDM/blob/master/.github/workflows/CI_build.yml","dependencies":[{"id":6969146746,"package_name":"actions/checkout","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":6969146747,"package_name":"actions/setup-python","ecosystem":"actions","requirements":"v1","direct":true,"kind":"composite","optional":false},{"id":6969146748,"package_name":"codecov/codecov-action","ecosystem":"actions","requirements":"v3","direct":true,"kind":"composite","optional":false}]},{"ecosystem":"actions","filepath":".github/workflows/CI_pages.yml","sha":null,"kind":"manifest","created_at":"2023-01-17T07:45:57.507Z","updated_at":"2023-01-17T07:45:57.507Z","repository_link":"https://github.com/koenderinklab/OpenDDM/blob/master/.github/workflows/CI_pages.yml","dependencies":[{"id":6969147139,"package_name":"actions/checkout","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":6969147146,"package_name":"actions/setup-python","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":6969147149,"package_name":"JamesIves/github-pages-deploy-action","ecosystem":"actions","requirements":"v4","direct":true,"kind":"composite","optional":false}]},{"ecosystem":"conda","filepath":"environment.yml","sha":null,"kind":"manifest","created_at":"2025-04-13T03:39:09.183Z","updated_at":"2025-04-13T03:39:09.183Z","repository_link":"https://github.com/koenderinklab/OpenDDM/blob/master/environment.yml","dependencies":[{"id":22662230899,"package_name":"dask","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":22662230900,"package_name":"dask-image","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":22662230973,"package_name":"ipympl","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":22662230974,"package_name":"ipywidgets","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":22662230975,"package_name":"jpype1","ecosystem":"conda","requirements":"\u003e0.6.1*","direct":true,"kind":"runtime","optional":false},{"id":22662231073,"package_name":"matplotlib","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":22662231074,"package_name":"nd2reader","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":22662231335,"package_name":"notebook","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":22662231336,"package_name":"numba","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":22662231338,"package_name":"numpy","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":22662231339,"package_name":"pims","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":22662231375,"package_name":"pip","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":22662231376,"package_name":"psutil","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":22662231429,"package_name":"pyfftw","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":22662231463,"package_name":"python","ecosystem":"conda","requirements":"3.8.*","direct":true,"kind":"runtime","optional":false},{"id":22662231464,"package_name":"python-graphviz","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":22662231475,"package_name":"readlif","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":22662231509,"package_name":"scikit-image","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":22662231513,"package_name":"scipy","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":22662231514,"package_name":"tqdm","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":22662231515,"package_name":"xarray","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false}]},{"ecosystem":"pypi","filepath":"pyproject.toml","sha":null,"kind":"manifest","created_at":"2025-04-13T03:39:18.457Z","updated_at":"2025-04-13T03:39:18.457Z","repository_link":"https://github.com/koenderinklab/OpenDDM/blob/master/pyproject.toml","dependencies":[]}],"score":null,"created_at":"2025-09-04T15:50:52.888Z","updated_at":"2025-10-07T08:10:20.790Z","avatar_url":"https://github.com/koenderinklab.png","language":"Jupyter Notebook","category":null,"sub_category":null,"monthly_downloads":0,"funding_links":[],"readme_doi_urls":[],"works":{},"citation_counts":{},"total_citations":0,"keywords_from_contributors":[],"project_url":"https://science.ecosyste.ms/api/v1/projects/21403","html_url":"https://science.ecosyste.ms/projects/21403"}