{"id":23193,"name":"rosella","description":"Metagenomic Binning Algorithm","url":"https://github.com/rhysnewell/rosella","last_synced_at":"2025-09-05T01:53:37.025Z","repository":{"id":40613608,"uuid":"247065826","full_name":"rhysnewell/rosella","owner":"rhysnewell","description":"Metagenomic Binning Algorithm","archived":false,"fork":false,"pushed_at":"2024-10-21T23:40:12.000Z","size":4976,"stargazers_count":47,"open_issues_count":11,"forks_count":3,"subscribers_count":5,"default_branch":"main","last_synced_at":"2025-08-12T23:58:43.061Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":null,"language":"Rust","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"bsd-3-clause","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/rhysnewell.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":"CITATION.cff","codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null}},"created_at":"2020-03-13T12:25:29.000Z","updated_at":"2025-07-10T07:14:30.000Z","dependencies_parsed_at":"2023-09-25T05:09:13.347Z","dependency_job_id":"f251eb7f-3405-4cde-a890-dd4d685ddd1b","html_url":"https://github.com/rhysnewell/rosella","commit_stats":null,"previous_names":[],"tags_count":25,"template":false,"template_full_name":null,"purl":"pkg:github/rhysnewell/rosella","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/rhysnewell","download_url":"https://codeload.github.com/rhysnewell/rosella/tar.gz/refs/heads/main","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":273699716,"owners_count":25152285,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-09-04T02:00:08.968Z","response_time":61,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"owner":{"login":"rhysnewell","name":"Rhys Newell","uuid":"42852939","kind":"user","description":"Bioinformatics Software Engineer @ Microba. Awaiting for my PhD to be examined. Specialises in software development and analysis of big genomic data","email":"","website":"rhysnewell.github.io","location":"Sydney, Australia","twitter":"rhysnewell","company":"Microba LifeSciences","icon_url":"https://avatars.githubusercontent.com/u/42852939?u=70efcd598c9d46ad1589f0702315f134f3d0e0a0\u0026v=4","repositories_count":11,"last_synced_at":"2023-03-08T00:29:30.272Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/rhysnewell","funding_links":[],"total_stars":null,"followers":null,"following":null,"created_at":"2022-11-17T19:28:14.375Z","updated_at":"2023-03-08T00:29:30.284Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/rhysnewell","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/rhysnewell/repositories"},"packages":[{"id":8538563,"name":"rosella","ecosystem":"cargo","description":"Metagenome assembled genome recovery from metagenomes using UMAP and HDBSCAN","homepage":"https://rhysnewell.github.io/rosella/","licenses":"GPL-3.0","normalized_licenses":["GPL-3.0"],"repository_url":"https://github.com/rhysnewell/rosella","keywords_array":[],"namespace":null,"versions_count":5,"first_release_published_at":"2023-11-04T07:42:39.675Z","latest_release_published_at":"2024-07-17T01:16:55.771Z","latest_release_number":"0.5.4","last_synced_at":"2025-08-12T14:05:35.026Z","created_at":"2023-11-04T07:49:30.390Z","updated_at":"2025-08-13T07:10:10.648Z","registry_url":"https://crates.io/crates/rosella/","install_command":"cargo install rosella","documentation_url":"https://docs.rs/rosella/","metadata":{"categories":[]},"repo_metadata":{"id":40613608,"uuid":"247065826","full_name":"rhysnewell/rosella","owner":"rhysnewell","description":"Metagenomic Binning Algorithm","archived":false,"fork":false,"pushed_at":"2024-10-21T23:40:12.000Z","size":4976,"stargazers_count":47,"open_issues_count":11,"forks_count":3,"subscribers_count":5,"default_branch":"main","last_synced_at":"2025-08-12T23:58:43.061Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":null,"language":"Rust","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"bsd-3-clause","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/rhysnewell.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":"CITATION.cff","codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null}},"created_at":"2020-03-13T12:25:29.000Z","updated_at":"2025-07-10T07:14:30.000Z","dependencies_parsed_at":"2023-09-25T05:09:13.347Z","dependency_job_id":"f251eb7f-3405-4cde-a890-dd4d685ddd1b","html_url":"https://github.com/rhysnewell/rosella","commit_stats":null,"previous_names":[],"tags_count":25,"template":false,"template_full_name":null,"purl":"pkg:github/rhysnewell/rosella","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/rhysnewell","download_url":"https://codeload.github.com/rhysnewell/rosella/tar.gz/refs/heads/main","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella/sbom","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":270200357,"owners_count":24543846,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-08-13T02:00:09.904Z","response_time":66,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"},"owner_record":{"login":"rhysnewell","name":"Rhys Newell","uuid":"42852939","kind":"user","description":"Bioinformatics Software Engineer @ Microba. Awaiting for my PhD to be examined. Specialises in software development and analysis of big genomic data","email":"","website":"rhysnewell.github.io","location":"Sydney, Australia","twitter":"rhysnewell","company":"Microba LifeSciences","icon_url":"https://avatars.githubusercontent.com/u/42852939?u=70efcd598c9d46ad1589f0702315f134f3d0e0a0\u0026v=4","repositories_count":11,"last_synced_at":"2023-03-08T00:29:30.272Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/rhysnewell","funding_links":[],"total_stars":null,"followers":null,"following":null,"created_at":"2022-11-17T19:28:14.375Z","updated_at":"2023-03-08T00:29:30.284Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/rhysnewell","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/rhysnewell/repositories"},"tags":[{"name":"v0.5.5","sha":"f1f994e80cc8eeff97faefef4b8e63aa87e1e092","kind":"commit","published_at":"2024-10-21T23:38:09.000Z","download_url":"https://codeload.github.com/rhysnewell/rosella/tar.gz/v0.5.5","html_url":"https://github.com/rhysnewell/rosella/releases/tag/v0.5.5","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/rhysnewell/rosella@v0.5.5","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella/tags/v0.5.5","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella/tags/v0.5.5/manifests"},{"name":"v0.5.4","sha":"3ec2bf7b64bd6576b73f345855bb965c2d85e04f","kind":"commit","published_at":"2024-07-17T01:12:04.000Z","download_url":"https://codeload.github.com/rhysnewell/rosella/tar.gz/v0.5.4","html_url":"https://github.com/rhysnewell/rosella/releases/tag/v0.5.4","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/rhysnewell/rosella@v0.5.4","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella/tags/v0.5.4","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella/tags/v0.5.4/manifests"},{"name":"v0.5.3","sha":"b9b5b36c8b2b0141bf697d4f5de6a31c2c831578","kind":"commit","published_at":"2024-01-05T00:07:24.000Z","download_url":"https://codeload.github.com/rhysnewell/rosella/tar.gz/v0.5.3","html_url":"https://github.com/rhysnewell/rosella/releases/tag/v0.5.3","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/rhysnewell/rosella@v0.5.3","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella/tags/v0.5.3","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella/tags/v0.5.3/manifests"},{"name":"v0.5.2","sha":"06bd9907e63c40652bea381f8527e6f2f3502556","kind":"commit","published_at":"2023-12-04T23:57:23.000Z","download_url":"https://codeload.github.com/rhysnewell/rosella/tar.gz/v0.5.2","html_url":"https://github.com/rhysnewell/rosella/releases/tag/v0.5.2","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/rhysnewell/rosella@v0.5.2","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella/tags/v0.5.2","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella/tags/v0.5.2/manifests"},{"name":"v0.5.1","sha":"76020d7adfd4e0149eec21078ad311fbe9180f22","kind":"commit","published_at":"2023-11-16T02:25:40.000Z","download_url":"https://codeload.github.com/rhysnewell/rosella/tar.gz/v0.5.1","html_url":"https://github.com/rhysnewell/rosella/releases/tag/v0.5.1","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/rhysnewell/rosella@v0.5.1","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella/tags/v0.5.1","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella/tags/v0.5.1/manifests"},{"name":"v0.5.0","sha":"c57daaf93727ec670aede829526e97ac7a603caa","kind":"commit","published_at":"2023-11-04T08:25:10.000Z","download_url":"https://codeload.github.com/rhysnewell/rosella/tar.gz/v0.5.0","html_url":"https://github.com/rhysnewell/rosella/releases/tag/v0.5.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/rhysnewell/rosella@v0.5.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella/tags/v0.5.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella/tags/v0.5.0/manifests"},{"name":"v0.4.2","sha":"4d33e8f9a3237f6fe3286aa53197261f491f2c63","kind":"commit","published_at":"2022-09-27T23:45:14.000Z","download_url":"https://codeload.github.com/rhysnewell/rosella/tar.gz/v0.4.2","html_url":"https://github.com/rhysnewell/rosella/releases/tag/v0.4.2","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/rhysnewell/rosella@v0.4.2","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella/tags/v0.4.2","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella/tags/v0.4.2/manifests"},{"name":"v0.4.1","sha":"cac51d4223e05d18293b618a684664771492c65d","kind":"commit","published_at":"2022-02-02T22:40:24.000Z","download_url":"https://codeload.github.com/rhysnewell/rosella/tar.gz/v0.4.1","html_url":"https://github.com/rhysnewell/rosella/releases/tag/v0.4.1","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/rhysnewell/rosella@v0.4.1","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella/tags/v0.4.1","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella/tags/v0.4.1/manifests"},{"name":"latest","sha":"cac51d4223e05d18293b618a684664771492c65d","kind":"commit","published_at":"2022-02-02T22:40:24.000Z","download_url":"https://codeload.github.com/rhysnewell/rosella/tar.gz/latest","html_url":"https://github.com/rhysnewell/rosella/releases/tag/latest","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/rhysnewell/rosella@latest","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella/tags/latest","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella/tags/latest/manifests"},{"name":"v0.4.0","sha":"2c268f9c369d82ba2a49919d5dc6defc05abc66a","kind":"tag","published_at":"2022-02-01T01:43:43.000Z","download_url":"https://codeload.github.com/rhysnewell/rosella/tar.gz/v0.4.0","html_url":"https://github.com/rhysnewell/rosella/releases/tag/v0.4.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/rhysnewell/rosella@v0.4.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella/tags/v0.4.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella/tags/v0.4.0/manifests"},{"name":"v0.4.0rc1","sha":"2c268f9c369d82ba2a49919d5dc6defc05abc66a","kind":"tag","published_at":"2022-02-01T01:32:22.000Z","download_url":"https://codeload.github.com/rhysnewell/rosella/tar.gz/v0.4.0rc1","html_url":"https://github.com/rhysnewell/rosella/releases/tag/v0.4.0rc1","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/rhysnewell/rosella@v0.4.0rc1","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella/tags/v0.4.0rc1","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella/tags/v0.4.0rc1/manifests"},{"name":"v0.3.3","sha":"ca27e5a117ce54364d1f3764c76e77bd28df366f","kind":"commit","published_at":"2021-03-15T04:25:16.000Z","download_url":"https://codeload.github.com/rhysnewell/rosella/tar.gz/v0.3.3","html_url":"https://github.com/rhysnewell/rosella/releases/tag/v0.3.3","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/rhysnewell/rosella@v0.3.3","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella/tags/v0.3.3","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella/tags/v0.3.3/manifests"},{"name":"v0.3.2","sha":"c9ed162552a334c9f59f94e984d7eb835cadb7a3","kind":"commit","published_at":"2021-03-10T02:49:35.000Z","download_url":"https://codeload.github.com/rhysnewell/rosella/tar.gz/v0.3.2","html_url":"https://github.com/rhysnewell/rosella/releases/tag/v0.3.2","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/rhysnewell/rosella@v0.3.2","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella/tags/v0.3.2","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella/tags/v0.3.2/manifests"},{"name":"v0.3.1","sha":"27dcea4c7f34e5601d674f088f1f3f0fa073265c","kind":"commit","published_at":"2021-03-08T23:35:24.000Z","download_url":"https://codeload.github.com/rhysnewell/rosella/tar.gz/v0.3.1","html_url":"https://github.com/rhysnewell/rosella/releases/tag/v0.3.1","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/rhysnewell/rosella@v0.3.1","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella/tags/v0.3.1","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella/tags/v0.3.1/manifests"},{"name":"v0.3.0","sha":"bce39300fa12d63546683f1f5c1fb4c580f3baf8","kind":"commit","published_at":"2021-03-02T04:28:55.000Z","download_url":"https://codeload.github.com/rhysnewell/rosella/tar.gz/v0.3.0","html_url":"https://github.com/rhysnewell/rosella/releases/tag/v0.3.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/rhysnewell/rosella@v0.3.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella/tags/v0.3.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella/tags/v0.3.0/manifests"},{"name":"v0.2.4b","sha":"1873b2a39f732a154937d13dedf8765751f1a8b1","kind":"commit","published_at":"2021-01-15T09:34:41.000Z","download_url":"https://codeload.github.com/rhysnewell/rosella/tar.gz/v0.2.4b","html_url":"https://github.com/rhysnewell/rosella/releases/tag/v0.2.4b","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/rhysnewell/rosella@v0.2.4b","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella/tags/v0.2.4b","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella/tags/v0.2.4b/manifests"},{"name":"v0.2.4","sha":"1873b2a39f732a154937d13dedf8765751f1a8b1","kind":"commit","published_at":"2021-01-15T09:34:41.000Z","download_url":"https://codeload.github.com/rhysnewell/rosella/tar.gz/v0.2.4","html_url":"https://github.com/rhysnewell/rosella/releases/tag/v0.2.4","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/rhysnewell/rosella@v0.2.4","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella/tags/v0.2.4","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella/tags/v0.2.4/manifests"},{"name":"v0.2.4c","sha":"76e03dbeebff0343cc02563e5c09b71a73e604e9","kind":"commit","published_at":"2021-01-15T08:22:08.000Z","download_url":"https://codeload.github.com/rhysnewell/rosella/tar.gz/v0.2.4c","html_url":"https://github.com/rhysnewell/rosella/releases/tag/v0.2.4c","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/rhysnewell/rosella@v0.2.4c","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella/tags/v0.2.4c","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella/tags/v0.2.4c/manifests"},{"name":"v0.2.3","sha":"d155a900bd1a02dd8e64d99ff80884d902b0a165","kind":"commit","published_at":"2021-01-13T06:21:35.000Z","download_url":"https://codeload.github.com/rhysnewell/rosella/tar.gz/v0.2.3","html_url":"https://github.com/rhysnewell/rosella/releases/tag/v0.2.3","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/rhysnewell/rosella@v0.2.3","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella/tags/v0.2.3","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella/tags/v0.2.3/manifests"},{"name":"v0.2.2","sha":"ae6b19c7405a8618f079a53ac36a8201a5a4f531","kind":"commit","published_at":"2021-01-13T00:30:33.000Z","download_url":"https://codeload.github.com/rhysnewell/rosella/tar.gz/v0.2.2","html_url":"https://github.com/rhysnewell/rosella/releases/tag/v0.2.2","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/rhysnewell/rosella@v0.2.2","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella/tags/v0.2.2","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella/tags/v0.2.2/manifests"},{"name":"v0.2.1","sha":"63312fb12085c6c194fd30f2bdab595eed59fbc5","kind":"commit","published_at":"2021-01-12T05:03:59.000Z","download_url":"https://codeload.github.com/rhysnewell/rosella/tar.gz/v0.2.1","html_url":"https://github.com/rhysnewell/rosella/releases/tag/v0.2.1","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/rhysnewell/rosella@v0.2.1","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella/tags/v0.2.1","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella/tags/v0.2.1/manifests"},{"name":"v0.2.0","sha":"760d269fd476685581509134ab5f5c86502298c1","kind":"commit","published_at":"2021-01-12T03:34:41.000Z","download_url":"https://codeload.github.com/rhysnewell/rosella/tar.gz/v0.2.0","html_url":"https://github.com/rhysnewell/rosella/releases/tag/v0.2.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/rhysnewell/rosella@v0.2.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella/tags/v0.2.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella/tags/v0.2.0/manifests"},{"name":"v0.1.0","sha":"b02b8220c0137c65df7545d2c35e8385545ceba3","kind":"commit","published_at":"2020-12-21T06:06:29.000Z","download_url":"https://codeload.github.com/rhysnewell/rosella/tar.gz/v0.1.0","html_url":"https://github.com/rhysnewell/rosella/releases/tag/v0.1.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/rhysnewell/rosella@v0.1.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella/tags/v0.1.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella/tags/v0.1.0/manifests"},{"name":"v0.0.2","sha":"69ee4e59716e8892fbb76ea7ac0f87adc60077ed","kind":"commit","published_at":"2020-11-25T03:43:03.000Z","download_url":"https://codeload.github.com/rhysnewell/rosella/tar.gz/v0.0.2","html_url":"https://github.com/rhysnewell/rosella/releases/tag/v0.0.2","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/rhysnewell/rosella@v0.0.2","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella/tags/v0.0.2","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella/tags/v0.0.2/manifests"},{"name":"v0.0.1","sha":"959a102960f86039bd0e75aaf97bd2e80b862f6b","kind":"commit","published_at":"2020-11-24T05:25:11.000Z","download_url":"https://codeload.github.com/rhysnewell/rosella/tar.gz/v0.0.1","html_url":"https://github.com/rhysnewell/rosella/releases/tag/v0.0.1","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/rhysnewell/rosella@v0.0.1","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella/tags/v0.0.1","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella/tags/v0.0.1/manifests"}]},"repo_metadata_updated_at":"2025-08-13T07:10:10.648Z","dependent_packages_count":0,"downloads":6140,"downloads_period":"total","dependent_repos_count":0,"rankings":{"downloads":98.40088797029892,"dependent_repos_count":30.654089687540676,"dependent_packages_count":36.19256787780465,"stargazers_count":null,"forks_count":null,"docker_downloads_count":null,"average":55.08251517854808},"purl":"pkg:cargo/rosella","advisories":[],"docker_usage_url":"https://docker.ecosyste.ms/usage/cargo/rosella","docker_dependents_count":null,"docker_downloads_count":null,"usage_url":"https://repos.ecosyste.ms/usage/cargo/rosella","dependent_repositories_url":"https://repos.ecosyste.ms/api/v1/usage/cargo/rosella/dependencies","status":null,"funding_links":[],"critical":null,"issue_metadata":{"last_synced_at":"2025-07-07T08:20:27.623Z","issues_count":36,"pull_requests_count":25,"avg_time_to_close_issue":11804694.73076923,"avg_time_to_close_pull_request":79233.48,"issues_closed_count":26,"pull_requests_closed_count":25,"pull_request_authors_count":2,"issue_authors_count":25,"avg_comments_per_issue":4.805555555555555,"avg_comments_per_pull_request":0.04,"merged_pull_requests_count":25,"bot_issues_count":0,"bot_pull_requests_count":0,"past_year_issues_count":4,"past_year_pull_requests_count":3,"past_year_avg_time_to_close_issue":527788.0,"past_year_avg_time_to_close_pull_request":26.666666666666668,"past_year_issues_closed_count":1,"past_year_pull_requests_closed_count":3,"past_year_pull_request_authors_count":1,"past_year_issue_authors_count":3,"past_year_avg_comments_per_issue":1.25,"past_year_avg_comments_per_pull_request":0.0,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":3,"issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella/issues","maintainers":[{"login":"rhysnewell","count":25,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/rhysnewell"},{"login":"wwood","count":3,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/wwood"}],"active_maintainers":[{"login":"rhysnewell","count":2,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/rhysnewell"}]},"versions_url":"https://packages.ecosyste.ms/api/v1/registries/crates.io/packages/rosella/versions","version_numbers_url":"https://packages.ecosyste.ms/api/v1/registries/crates.io/packages/rosella/version_numbers","dependent_packages_url":"https://packages.ecosyste.ms/api/v1/registries/crates.io/packages/rosella/dependent_packages","related_packages_url":"https://packages.ecosyste.ms/api/v1/registries/crates.io/packages/rosella/related_packages","maintainers":[{"uuid":"80059","login":"rhysnewell","name":"Rhys Newell","email":null,"url":"https://github.com/rhysnewell","packages_count":6,"html_url":"https://crates.io/users/rhysnewell","role":null,"created_at":"2023-11-04T07:49:31.464Z","updated_at":"2023-11-04T07:49:31.464Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/crates.io/maintainers/rhysnewell/packages"}],"registry":{"name":"crates.io","url":"https://crates.io","ecosystem":"cargo","default":true,"packages_count":204410,"maintainers_count":50505,"namespaces_count":0,"keywords_count":51682,"github":"rust-lang","metadata":{"funded_packages_count":19894},"icon_url":"https://github.com/rust-lang.png","created_at":"2022-04-04T15:19:22.689Z","updated_at":"2025-09-04T06:52:42.730Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/crates.io/packages","maintainers_url":"https://packages.ecosyste.ms/api/v1/registries/crates.io/maintainers","namespaces_url":"https://packages.ecosyste.ms/api/v1/registries/crates.io/namespaces"}}],"commits":{"id":2921721,"full_name":"rhysnewell/rosella","default_branch":"main","committers":[{"name":"Rhys Newell","email":"rhys.newell@hdr.qut.edu.au","login":"rhysnewell","count":195},{"name":"Rhys Newell","email":"rhys.newell@microba.com","login":null,"count":5},{"name":"Ben Woodcroft","email":"benjwoodcroft@gmail.com","login":"wwood","count":3}],"total_commits":203,"total_committers":3,"total_bot_commits":0,"total_bot_committers":0,"mean_commits":67.66666666666667,"dds":0.039408866995073843,"past_year_committers":[{"name":"rhysnewell","email":"rhys.newell94@gmail.com","login":"rhysnewell","count":4}],"past_year_total_commits":4,"past_year_total_committers":1,"past_year_total_bot_commits":0,"past_year_total_bot_committers":0,"past_year_mean_commits":4.0,"past_year_dds":0.0,"last_synced_at":"2025-06-07T17:01:48.556Z","last_synced_commit":"195f8f676fa9b5a4095fab8e38d70f14f406f185","created_at":"2024-10-12T06:22:24.893Z","updated_at":"2025-06-07T17:01:48.556Z","commits_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella/commits","host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-05T00:00:10.343Z","repositories_count":5480019,"commits_count":853389012,"contributors_count":31098138,"owners_count":906558,"icon_url":"https://github.com/github.png","host_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories"}},"issues_stats":{"full_name":"rhysnewell/rosella","html_url":"https://github.com/rhysnewell/rosella","last_synced_at":"2025-08-13T22:30:37.678Z","status":"error","issues_count":36,"pull_requests_count":25,"avg_time_to_close_issue":11804694.73076923,"avg_time_to_close_pull_request":79233.48,"issues_closed_count":26,"pull_requests_closed_count":25,"pull_request_authors_count":2,"issue_authors_count":25,"avg_comments_per_issue":4.805555555555555,"avg_comments_per_pull_request":0.04,"merged_pull_requests_count":25,"bot_issues_count":0,"bot_pull_requests_count":0,"past_year_issues_count":4,"past_year_pull_requests_count":3,"past_year_avg_time_to_close_issue":527788.0,"past_year_avg_time_to_close_pull_request":26.666666666666668,"past_year_issues_closed_count":1,"past_year_pull_requests_closed_count":3,"past_year_pull_request_authors_count":1,"past_year_issue_authors_count":3,"past_year_avg_comments_per_issue":1.25,"past_year_avg_comments_per_pull_request":0.0,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":3,"created_at":"2024-10-12T06:22:26.927Z","updated_at":"2025-09-02T14:33:39.229Z","repository_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella","issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/rhysnewell%2Frosella/issues","issue_labels_count":{},"pull_request_labels_count":{},"issue_author_associations_count":{"NONE":32,"COLLABORATOR":2,"OWNER":1},"pull_request_author_associations_count":{"OWNER":26,"COLLABORATOR":1},"issue_authors":{"jvollme":3,"michoug":3,"jianshu93":3,"Rridley7":2,"wwood":2,"aljazdzy":2,"Valentin-Bio":2,"Valentin-Bio-zz":1,"gabrieleghiotto":1,"schmigle":1,"dpryan79":1,"alienzj":1,"greenmna":1,"StevenJRobbins":1,"mmac0026":1,"Hocnonsense":1,"janfelix":1,"Aveglia":1,"Jolvii85":1,"DeaconOfBiology":1,"xvazquezc":1,"rhysnewell":1,"ka-block":1,"Thexiyang":1,"willem-stock":1},"pull_request_authors":{"rhysnewell":26,"wwood":1},"host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-05T00:00:10.444Z","repositories_count":10082226,"issues_count":31213887,"pull_requests_count":96046612,"authors_count":10694202,"icon_url":"https://github.com/github.png","host_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories","owners_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/owners","authors_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors"},"past_year_issue_labels_count":{},"past_year_pull_request_labels_count":{},"past_year_issue_author_associations_count":{"NONE":4},"past_year_pull_request_author_associations_count":{"OWNER":4},"past_year_issue_authors":{"Aveglia":1,"Hocnonsense":1,"michoug":1,"xvazquezc":1},"past_year_pull_request_authors":{"rhysnewell":4},"maintainers":[{"login":"rhysnewell","count":27,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/rhysnewell"},{"login":"wwood","count":3,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/wwood"}],"active_maintainers":[{"login":"rhysnewell","count":4,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/rhysnewell"}]},"events":{"total":{"IssuesEvent":4,"WatchEvent":8,"DeleteEvent":1,"IssueCommentEvent":4,"PushEvent":4,"PullRequestEvent":4,"CreateEvent":2},"last_year":{"IssuesEvent":4,"WatchEvent":8,"DeleteEvent":1,"IssueCommentEvent":4,"PushEvent":4,"PullRequestEvent":4,"CreateEvent":2}},"keywords":[],"dependencies":[{"ecosystem":"cargo","filepath":"Cargo.toml","sha":null,"kind":"manifest","created_at":"2022-08-27T20:10:29.460Z","updated_at":"2022-08-27T20:10:29.460Z","repository_link":"https://github.com/rhysnewell/rosella/blob/main/Cargo.toml","dependencies":[{"id":2955915313,"package_name":"ansi_term","ecosystem":"cargo","requirements":"0.12.1","direct":true,"kind":"runtime","optional":false},{"id":2955915314,"package_name":"bio","ecosystem":"cargo","requirements":"0.35.0","direct":true,"kind":"runtime","optional":false},{"id":2955915315,"package_name":"bio-types","ecosystem":"cargo","requirements":"0.12.0","direct":true,"kind":"runtime","optional":false},{"id":2955915316,"package_name":"bird_tool_utils","ecosystem":"cargo","requirements":"0.3.0","direct":true,"kind":"runtime","optional":false},{"id":2955915317,"package_name":"clap","ecosystem":"cargo","requirements":"2","direct":true,"kind":"runtime","optional":false},{"id":2955915318,"package_name":"galah","ecosystem":"cargo","requirements":"0.3.0","direct":true,"kind":"runtime","optional":false},{"id":2955915319,"package_name":"csv","ecosystem":"cargo","requirements":"1","direct":true,"kind":"runtime","optional":false},{"id":2955915320,"package_name":"derive_builder","ecosystem":"cargo","requirements":"0.9","direct":true,"kind":"runtime","optional":false},{"id":2955915321,"package_name":"derive-new","ecosystem":"cargo","requirements":"0.5","direct":true,"kind":"runtime","optional":false},{"id":2955915322,"package_name":"env_logger","ecosystem":"cargo","requirements":"0.6","direct":true,"kind":"runtime","optional":false},{"id":2955915323,"package_name":"glob","ecosystem":"cargo","requirements":"0.3.*","direct":true,"kind":"runtime","optional":false},{"id":2955915324,"package_name":"itertools","ecosystem":"cargo","requirements":"0.8","direct":true,"kind":"runtime","optional":false},{"id":2955915325,"package_name":"lazy_static","ecosystem":"cargo","requirements":"1.3.0","direct":true,"kind":"runtime","optional":false},{"id":2955915326,"package_name":"log","ecosystem":"cargo","requirements":"0.4","direct":true,"kind":"runtime","optional":false},{"id":2955915327,"package_name":"nix","ecosystem":"cargo","requirements":"0.24","direct":true,"kind":"runtime","optional":false},{"id":2955915328,"package_name":"ordered-float","ecosystem":"cargo","requirements":"1","direct":true,"kind":"runtime","optional":false},{"id":2955915329,"package_name":"openssl-sys","ecosystem":"cargo","requirements":"0.9","direct":true,"kind":"runtime","optional":false},{"id":2955915330,"package_name":"openssl","ecosystem":"cargo","requirements":"0.10","direct":true,"kind":"runtime","optional":false},{"id":2955915331,"package_name":"pest","ecosystem":"cargo","requirements":"2","direct":true,"kind":"runtime","optional":false},{"id":2955915332,"package_name":"pest_derive","ecosystem":"cargo","requirements":"2","direct":true,"kind":"runtime","optional":false},{"id":2955915333,"package_name":"rand","ecosystem":"cargo","requirements":"0.6","direct":true,"kind":"runtime","optional":false},{"id":2955915334,"package_name":"rayon","ecosystem":"cargo","requirements":"1.5.1","direct":true,"kind":"runtime","optional":false},{"id":2955915335,"package_name":"rust-htslib","ecosystem":"cargo","requirements":"0.38.2","direct":true,"kind":"runtime","optional":false},{"id":2955915336,"package_name":"seq_io","ecosystem":"cargo","requirements":"0.3.*","direct":true,"kind":"runtime","optional":false},{"id":2955915337,"package_name":"strum","ecosystem":"cargo","requirements":"0.17.1","direct":true,"kind":"runtime","optional":false},{"id":2955915338,"package_name":"strum_macros","ecosystem":"cargo","requirements":"0.17.1","direct":true,"kind":"runtime","optional":false},{"id":2955915339,"package_name":"serde","ecosystem":"cargo","requirements":"1","direct":true,"kind":"runtime","optional":false},{"id":2955915340,"package_name":"serde_derive","ecosystem":"cargo","requirements":"1","direct":true,"kind":"runtime","optional":false},{"id":2955915341,"package_name":"serde_json","ecosystem":"cargo","requirements":"1","direct":true,"kind":"runtime","optional":false},{"id":2955915342,"package_name":"serde_yaml","ecosystem":"cargo","requirements":"0.8","direct":true,"kind":"runtime","optional":false},{"id":2955915343,"package_name":"statrs","ecosystem":"cargo","requirements":"0.13","direct":true,"kind":"runtime","optional":false},{"id":2955915344,"package_name":"tempdir","ecosystem":"cargo","requirements":"0.3","direct":true,"kind":"runtime","optional":false},{"id":2955915345,"package_name":"tempfile","ecosystem":"cargo","requirements":"3.0","direct":true,"kind":"runtime","optional":false},{"id":2955915346,"package_name":"indicatif","ecosystem":"cargo","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":2955915347,"package_name":"scoped_threadpool","ecosystem":"cargo","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":2955915348,"package_name":"ndarray-npy","ecosystem":"cargo","requirements":"0.8.0","direct":true,"kind":"runtime","optional":false},{"id":2955915349,"package_name":"ndarray","ecosystem":"cargo","requirements":"0.15.3","direct":true,"kind":"runtime","optional":false},{"id":2955915350,"package_name":"needletail","ecosystem":"cargo","requirements":"0.4.1","direct":true,"kind":"runtime","optional":false},{"id":2955915351,"package_name":"assert_cli","ecosystem":"cargo","requirements":"0.6.*","direct":true,"kind":"development","optional":false}]},{"ecosystem":"actions","filepath":".github/workflows/deploy-docs.yaml","sha":null,"kind":"manifest","created_at":"2023-09-25T05:09:13.314Z","updated_at":"2023-09-25T05:09:13.314Z","repository_link":"https://github.com/rhysnewell/rosella/blob/main/.github/workflows/deploy-docs.yaml","dependencies":[{"id":13934423499,"package_name":"actions/checkout","ecosystem":"actions","requirements":"master","direct":true,"kind":"composite","optional":false},{"id":13934423500,"package_name":"crazy-max/ghaction-github-pages","ecosystem":"actions","requirements":"v3.0.0","direct":true,"kind":"composite","optional":false}]},{"ecosystem":"actions","filepath":".github/workflows/release-rosella.yml","sha":null,"kind":"manifest","created_at":"2023-09-25T05:09:13.323Z","updated_at":"2023-09-25T05:09:13.323Z","repository_link":"https://github.com/rhysnewell/rosella/blob/main/.github/workflows/release-rosella.yml","dependencies":[{"id":13934423501,"package_name":"actions/checkout","ecosystem":"actions","requirements":"main","direct":true,"kind":"composite","optional":false},{"id":13934423502,"package_name":"rhysnewell/rust-cargo-musl-action","ecosystem":"actions","requirements":"v0.1.20","direct":true,"kind":"composite","optional":false},{"id":13934423503,"package_name":"master-atul/tar-action","ecosystem":"actions","requirements":"v1.0.2","direct":true,"kind":"composite","optional":false},{"id":13934423504,"package_name":"actions/upload-artifact","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":13934423505,"package_name":"marvinpinto/action-automatic-releases","ecosystem":"actions","requirements":"latest","direct":true,"kind":"composite","optional":false}]}],"score":13.881798173543928,"created_at":"2025-09-04T15:50:54.860Z","updated_at":"2025-10-07T08:10:52.853Z","avatar_url":"https://github.com/rhysnewell.png","language":"Rust","category":null,"sub_category":null,"monthly_downloads":0,"funding_links":[],"readme_doi_urls":[],"works":{},"citation_counts":{},"total_citations":0,"keywords_from_contributors":[],"project_url":"https://science.ecosyste.ms/api/v1/projects/23193","html_url":"https://science.ecosyste.ms/projects/23193","bibtex_url":"https://science.ecosyste.ms/projects/23193/export.bibtex","apalike_url":"https://science.ecosyste.ms/projects/23193/export.apalike"}