{"id":2419,"name":"BCAWT","description":"BCAWT: Automated tool for codon usage bias analysis for molecular evolution - Published in JOSS (2019)","url":"https://github.com/aliyoussef96/bcaw-tool","last_synced_at":"2025-09-04T16:46:05.513Z","repository":{"id":57414311,"uuid":"189912439","full_name":"AliYoussef96/BCAW-Tool","owner":"AliYoussef96","description":"BCAWT: Automated tool for codon usage bias analysis for molecular evolution","archived":false,"fork":false,"pushed_at":"2025-02-19T12:48:13.000Z","size":4742,"stargazers_count":5,"open_issues_count":1,"forks_count":1,"subscribers_count":1,"default_branch":"master","last_synced_at":"2025-09-04T03:50:00.495Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":"","language":"Python","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"mit","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/AliYoussef96.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":"CONTRIBUTING.md","funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null}},"created_at":"2019-06-03T01:05:59.000Z","updated_at":"2025-02-19T12:48:17.000Z","dependencies_parsed_at":"2025-04-14T19:02:03.259Z","dependency_job_id":null,"html_url":"https://github.com/AliYoussef96/BCAW-Tool","commit_stats":null,"previous_names":[],"tags_count":1,"template":false,"template_full_name":null,"purl":"pkg:github/AliYoussef96/BCAW-Tool","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/AliYoussef96%2FBCAW-Tool","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/AliYoussef96%2FBCAW-Tool/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/AliYoussef96%2FBCAW-Tool/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/AliYoussef96%2FBCAW-Tool/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/AliYoussef96","download_url":"https://codeload.github.com/AliYoussef96/BCAW-Tool/tar.gz/refs/heads/master","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/AliYoussef96%2FBCAW-Tool/sbom","scorecard":{"id":11800,"data":{"date":"2025-08-11","repo":{"name":"github.com/AliYoussef96/BCAW-Tool","commit":"0a9a00eede9f37197f5fa4e68c4662fac440077e"},"scorecard":{"version":"v5.2.1-40-gf6ed084d","commit":"f6ed084d17c9236477efd66e5b258b9d4cc7b389"},"score":1.7,"checks":[{"name":"Packaging","score":-1,"reason":"packaging workflow not detected","details":["Warn: no GitHub/GitLab publishing workflow detected."],"documentation":{"short":"Determines if the project is published as a package that others can easily download, install, easily update, and uninstall.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#packaging"}},{"name":"Dangerous-Workflow","score":-1,"reason":"no workflows found","details":null,"documentation":{"short":"Determines if the project's GitHub Action workflows avoid dangerous patterns.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#dangerous-workflow"}},{"name":"Code-Review","score":0,"reason":"Found 0/30 approved changesets -- score normalized to 0","details":null,"documentation":{"short":"Determines if the project requires human code review before pull requests (aka merge requests) are merged.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#code-review"}},{"name":"Maintained","score":0,"reason":"0 commit(s) and 0 issue activity found in the last 90 days -- score normalized to 0","details":null,"documentation":{"short":"Determines if the project is \"actively maintained\".","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#maintained"}},{"name":"SAST","score":0,"reason":"no SAST tool detected","details":["Warn: no pull requests merged into dev branch"],"documentation":{"short":"Determines if the project uses static code analysis.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#sast"}},{"name":"Token-Permissions","score":-1,"reason":"No tokens found","details":null,"documentation":{"short":"Determines if the project's workflows follow the principle of least privilege.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#token-permissions"}},{"name":"Binary-Artifacts","score":10,"reason":"no binaries found in the repo","details":null,"documentation":{"short":"Determines if the project has generated executable (binary) artifacts in the source repository.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#binary-artifacts"}},{"name":"Pinned-Dependencies","score":-1,"reason":"no dependencies found","details":null,"documentation":{"short":"Determines if the project has declared and pinned the dependencies of its build process.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#pinned-dependencies"}},{"name":"CII-Best-Practices","score":0,"reason":"no effort to earn an OpenSSF best practices badge detected","details":null,"documentation":{"short":"Determines if the project has an OpenSSF (formerly CII) Best Practices Badge.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#cii-best-practices"}},{"name":"Security-Policy","score":0,"reason":"security policy file not detected","details":["Warn: no security policy file detected","Warn: no security file to analyze","Warn: no security file to analyze","Warn: no security file to analyze"],"documentation":{"short":"Determines if the project has published a security policy.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#security-policy"}},{"name":"Fuzzing","score":0,"reason":"project is not fuzzed","details":["Warn: no fuzzer integrations found"],"documentation":{"short":"Determines if the project uses fuzzing.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#fuzzing"}},{"name":"License","score":10,"reason":"license file detected","details":["Info: project has a license file: LICENSE:0","Info: FSF or OSI recognized license: MIT License: LICENSE:0"],"documentation":{"short":"Determines if the project has defined a license.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#license"}},{"name":"Signed-Releases","score":-1,"reason":"no releases found","details":null,"documentation":{"short":"Determines if the project cryptographically signs release artifacts.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#signed-releases"}},{"name":"Branch-Protection","score":0,"reason":"branch protection not enabled on development/release branches","details":["Warn: branch protection not enabled for branch 'master'"],"documentation":{"short":"Determines if the default and release branches are protected with GitHub's branch protection settings.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#branch-protection"}},{"name":"Vulnerabilities","score":0,"reason":"11 existing vulnerabilities detected","details":["Warn: Project is vulnerable to: PYSEC-2018-34 / GHSA-2fc2-6r4j-p65h","Warn: Project is vulnerable to: PYSEC-2021-856 / GHSA-5545-2q6w-2gh6","Warn: Project is vulnerable to: PYSEC-2019-108 / GHSA-9fq2-x9r6-wfmf","Warn: Project is vulnerable to: PYSEC-2018-33 / GHSA-cw6w-4rcx-xphc","Warn: Project is vulnerable to: PYSEC-2021-857 / GHSA-f7c7-j99h-c22f","Warn: Project is vulnerable to: GHSA-fpfv-jqm9-f5jm","Warn: Project is vulnerable to: PYSEC-2017-1 / GHSA-frgw-fgh6-9g52","Warn: Project is vulnerable to: PYSEC-2020-73","Warn: Project is vulnerable to: PYSEC-2019-156 / GHSA-xp76-357g-9wqq","Warn: Project is vulnerable to: PYSEC-2023-102","Warn: Project is vulnerable to: PYSEC-2023-114"],"documentation":{"short":"Determines if the project has open, known unfixed vulnerabilities.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#vulnerabilities"}}]},"last_synced_at":"2025-08-14T14:46:10.521Z","repository_id":57414311,"created_at":"2025-08-14T14:46:10.521Z","updated_at":"2025-08-14T14:46:10.521Z"},"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":273606165,"owners_count":25135936,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-09-04T02:00:08.968Z","response_time":61,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"owner":{"login":"AliYoussef96","name":"Ali Youssef","uuid":"42375503","kind":"user","description":"Trying to be a Bioinformatician","email":"","website":"https://www.linkedin.com/in/ali-youssef-455a92130/","location":"Egypt","twitter":null,"company":"Cairo university","icon_url":"https://avatars.githubusercontent.com/u/42375503?u=3ba8420554a8737880c20a33e7ba164d11c68a7a\u0026v=4","repositories_count":3,"last_synced_at":"2023-02-28T05:03:21.365Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/AliYoussef96","funding_links":[],"total_stars":null,"followers":null,"following":null,"created_at":"2023-02-28T05:03:21.372Z","updated_at":"2023-02-28T05:03:21.372Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/AliYoussef96","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/AliYoussef96/repositories"},"packages":[{"id":2653118,"name":"bcawt","ecosystem":"pypi","description":"Manages a complete workflow to analysis the codon usage bias","homepage":"https://github.com/AliYoussef96/BCAW-Tool","licenses":"MIT","normalized_licenses":["MIT"],"repository_url":"https://github.com/AliYoussef96/BCAW-Tool","keywords_array":[],"namespace":null,"versions_count":6,"first_release_published_at":"2019-08-05T13:58:49.000Z","latest_release_published_at":"2022-12-05T10:30:47.000Z","latest_release_number":"1.0.6","last_synced_at":"2025-09-03T23:11:05.972Z","created_at":"2022-04-10T10:10:17.523Z","updated_at":"2025-09-04T10:13:52.092Z","registry_url":"https://pypi.org/project/bcawt/","install_command":"pip install bcawt --index-url https://pypi.org/simple","documentation_url":"https://bcawt.readthedocs.io/","metadata":{"funding":null,"documentation":null,"classifiers":["Intended Audience :: Science/Research","License :: OSI Approved :: MIT License","Programming Language :: Python :: 3","Topic :: Scientific/Engineering :: Bio-Informatics"],"normalized_name":"bcawt","project_status":null},"repo_metadata":{"id":57414311,"uuid":"189912439","full_name":"AliYoussef96/BCAW-Tool","owner":"AliYoussef96","description":"BCAWT: Automated tool for codon usage bias analysis for molecular evolution","archived":false,"fork":false,"pushed_at":"2025-02-19T12:48:13.000Z","size":4742,"stargazers_count":5,"open_issues_count":1,"forks_count":1,"subscribers_count":1,"default_branch":"master","last_synced_at":"2025-08-28T02:33:11.611Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":"","language":"Python","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"mit","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/AliYoussef96.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":"CONTRIBUTING.md","funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null}},"created_at":"2019-06-03T01:05:59.000Z","updated_at":"2025-02-19T12:48:17.000Z","dependencies_parsed_at":"2025-04-14T19:02:03.259Z","dependency_job_id":null,"html_url":"https://github.com/AliYoussef96/BCAW-Tool","commit_stats":null,"previous_names":[],"tags_count":1,"template":false,"template_full_name":null,"purl":"pkg:github/AliYoussef96/BCAW-Tool","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/AliYoussef96%2FBCAW-Tool","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/AliYoussef96%2FBCAW-Tool/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/AliYoussef96%2FBCAW-Tool/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/AliYoussef96%2FBCAW-Tool/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/AliYoussef96","download_url":"https://codeload.github.com/AliYoussef96/BCAW-Tool/tar.gz/refs/heads/master","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/AliYoussef96%2FBCAW-Tool/sbom","scorecard":{"id":11800,"data":{"date":"2025-08-11","repo":{"name":"github.com/AliYoussef96/BCAW-Tool","commit":"0a9a00eede9f37197f5fa4e68c4662fac440077e"},"scorecard":{"version":"v5.2.1-40-gf6ed084d","commit":"f6ed084d17c9236477efd66e5b258b9d4cc7b389"},"score":1.7,"checks":[{"name":"Packaging","score":-1,"reason":"packaging workflow not detected","details":["Warn: no GitHub/GitLab publishing workflow detected."],"documentation":{"short":"Determines if the project is published as a package that others can easily download, install, easily update, and uninstall.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#packaging"}},{"name":"Dangerous-Workflow","score":-1,"reason":"no workflows found","details":null,"documentation":{"short":"Determines if the project's GitHub Action workflows avoid dangerous patterns.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#dangerous-workflow"}},{"name":"Code-Review","score":0,"reason":"Found 0/30 approved changesets -- score normalized to 0","details":null,"documentation":{"short":"Determines if the project requires human code review before pull requests (aka merge requests) are merged.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#code-review"}},{"name":"Maintained","score":0,"reason":"0 commit(s) and 0 issue activity found in the last 90 days -- score normalized to 0","details":null,"documentation":{"short":"Determines if the project is \"actively maintained\".","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#maintained"}},{"name":"SAST","score":0,"reason":"no SAST tool detected","details":["Warn: no pull requests merged into dev branch"],"documentation":{"short":"Determines if the project uses static code analysis.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#sast"}},{"name":"Token-Permissions","score":-1,"reason":"No tokens found","details":null,"documentation":{"short":"Determines if the project's workflows follow the principle of least privilege.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#token-permissions"}},{"name":"Binary-Artifacts","score":10,"reason":"no binaries found in the repo","details":null,"documentation":{"short":"Determines if the project has generated executable (binary) artifacts in the source repository.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#binary-artifacts"}},{"name":"Pinned-Dependencies","score":-1,"reason":"no dependencies found","details":null,"documentation":{"short":"Determines if the project has declared and pinned the dependencies of its build process.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#pinned-dependencies"}},{"name":"CII-Best-Practices","score":0,"reason":"no effort to earn an OpenSSF best practices badge detected","details":null,"documentation":{"short":"Determines if the project has an OpenSSF (formerly CII) Best Practices Badge.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#cii-best-practices"}},{"name":"Security-Policy","score":0,"reason":"security policy file not detected","details":["Warn: no security policy file detected","Warn: no security file to analyze","Warn: no security file to analyze","Warn: no security file to analyze"],"documentation":{"short":"Determines if the project has published a security policy.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#security-policy"}},{"name":"Fuzzing","score":0,"reason":"project is not fuzzed","details":["Warn: no fuzzer integrations found"],"documentation":{"short":"Determines if the project uses fuzzing.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#fuzzing"}},{"name":"License","score":10,"reason":"license file detected","details":["Info: project has a license file: LICENSE:0","Info: FSF or OSI recognized license: MIT License: LICENSE:0"],"documentation":{"short":"Determines if the project has defined a license.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#license"}},{"name":"Signed-Releases","score":-1,"reason":"no releases found","details":null,"documentation":{"short":"Determines if the project cryptographically signs release artifacts.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#signed-releases"}},{"name":"Branch-Protection","score":0,"reason":"branch protection not enabled on development/release branches","details":["Warn: branch protection not enabled for branch 'master'"],"documentation":{"short":"Determines if the default and release branches are protected with GitHub's branch protection settings.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#branch-protection"}},{"name":"Vulnerabilities","score":0,"reason":"11 existing vulnerabilities detected","details":["Warn: Project is vulnerable to: PYSEC-2018-34 / GHSA-2fc2-6r4j-p65h","Warn: Project is vulnerable to: PYSEC-2021-856 / GHSA-5545-2q6w-2gh6","Warn: Project is vulnerable to: PYSEC-2019-108 / GHSA-9fq2-x9r6-wfmf","Warn: Project is vulnerable to: PYSEC-2018-33 / GHSA-cw6w-4rcx-xphc","Warn: Project is vulnerable to: PYSEC-2021-857 / GHSA-f7c7-j99h-c22f","Warn: Project is vulnerable to: GHSA-fpfv-jqm9-f5jm","Warn: Project is vulnerable to: PYSEC-2017-1 / GHSA-frgw-fgh6-9g52","Warn: Project is vulnerable to: PYSEC-2020-73","Warn: Project is vulnerable to: PYSEC-2019-156 / GHSA-xp76-357g-9wqq","Warn: Project is vulnerable to: PYSEC-2023-102","Warn: Project is vulnerable to: PYSEC-2023-114"],"documentation":{"short":"Determines if the project has open, known unfixed vulnerabilities.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#vulnerabilities"}}]},"last_synced_at":"2025-08-14T14:46:10.521Z","repository_id":57414311,"created_at":"2025-08-14T14:46:10.521Z","updated_at":"2025-08-14T14:46:10.521Z"},"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":273523663,"owners_count":25120864,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-09-03T02:00:09.631Z","response_time":76,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"},"owner_record":{"login":"AliYoussef96","name":"Ali Youssef","uuid":"42375503","kind":"user","description":"Trying to be a Bioinformatician","email":"","website":"https://www.linkedin.com/in/ali-youssef-455a92130/","location":"Egypt","twitter":null,"company":"Cairo university","icon_url":"https://avatars.githubusercontent.com/u/42375503?u=3ba8420554a8737880c20a33e7ba164d11c68a7a\u0026v=4","repositories_count":3,"last_synced_at":"2023-02-28T05:03:21.365Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/AliYoussef96","funding_links":[],"total_stars":null,"followers":null,"following":null,"created_at":"2023-02-28T05:03:21.372Z","updated_at":"2023-02-28T05:03:21.372Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/AliYoussef96","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/AliYoussef96/repositories"},"tags":[{"name":"v1.0.3","sha":"9b83c712a311b55b16adf803f69c895465667127","kind":"commit","published_at":"2019-10-01T22:08:56.000Z","download_url":"https://codeload.github.com/AliYoussef96/BCAW-Tool/tar.gz/v1.0.3","html_url":"https://github.com/AliYoussef96/BCAW-Tool/releases/tag/v1.0.3","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/AliYoussef96/BCAW-Tool@v1.0.3","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/AliYoussef96%2FBCAW-Tool/tags/v1.0.3","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/AliYoussef96%2FBCAW-Tool/tags/v1.0.3/manifests"}]},"repo_metadata_updated_at":"2025-09-04T10:13:52.091Z","dependent_packages_count":0,"downloads":34,"downloads_period":"last-month","dependent_repos_count":1,"rankings":{"downloads":33.17827709918122,"dependent_repos_count":21.63438025370625,"dependent_packages_count":10.05962490376147,"stargazers_count":21.51414363522087,"forks_count":22.6077487391105,"docker_downloads_count":null,"average":21.79883492619606},"purl":"pkg:pypi/bcawt","advisories":[],"docker_usage_url":"https://docker.ecosyste.ms/usage/pypi/bcawt","docker_dependents_count":null,"docker_downloads_count":null,"usage_url":"https://repos.ecosyste.ms/usage/pypi/bcawt","dependent_repositories_url":"https://repos.ecosyste.ms/api/v1/usage/pypi/bcawt/dependencies","status":null,"funding_links":[],"critical":null,"issue_metadata":{"last_synced_at":"2025-08-31T18:20:38.730Z","issues_count":14,"pull_requests_count":1,"avg_time_to_close_issue":6114826.461538462,"avg_time_to_close_pull_request":2315.0,"issues_closed_count":13,"pull_requests_closed_count":1,"pull_request_authors_count":1,"issue_authors_count":4,"avg_comments_per_issue":1.7857142857142858,"avg_comments_per_pull_request":1.0,"merged_pull_requests_count":1,"bot_issues_count":0,"bot_pull_requests_count":0,"past_year_issues_count":0,"past_year_pull_requests_count":0,"past_year_avg_time_to_close_issue":null,"past_year_avg_time_to_close_pull_request":null,"past_year_issues_closed_count":0,"past_year_pull_requests_closed_count":0,"past_year_pull_request_authors_count":0,"past_year_issue_authors_count":0,"past_year_avg_comments_per_issue":null,"past_year_avg_comments_per_pull_request":null,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":0,"issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/AliYoussef96%2FBCAW-Tool/issues","maintainers":[],"active_maintainers":[]},"versions_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/packages/bcawt/versions","version_numbers_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/packages/bcawt/version_numbers","dependent_packages_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/packages/bcawt/dependent_packages","related_packages_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/packages/bcawt/related_packages","maintainers":[{"uuid":"aliyoussef96","login":"aliyoussef96","name":null,"email":null,"url":null,"packages_count":4,"html_url":"https://pypi.org/user/aliyoussef96/","role":null,"created_at":"2023-02-23T16:52:53.786Z","updated_at":"2023-02-23T16:52:53.786Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/maintainers/aliyoussef96/packages"}],"registry":{"name":"pypi.org","url":"https://pypi.org","ecosystem":"pypi","default":true,"packages_count":724742,"maintainers_count":308195,"namespaces_count":0,"keywords_count":237984,"github":"pypi","metadata":{"funded_packages_count":50481},"icon_url":"https://github.com/pypi.png","created_at":"2022-04-04T15:19:23.364Z","updated_at":"2025-09-04T05:23:51.177Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/packages","maintainers_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/maintainers","namespaces_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/namespaces"}}],"commits":{"id":541333,"full_name":"AliYoussef96/BCAW-Tool","default_branch":"master","committers":[{"name":"Ali Youssef","email":"42375503+AliYoussef96","login":"AliYoussef96","count":402},{"name":"Benjamin Lee","email":"benjamin_lee@college.harvard.edu","login":"Benjamin-Lee","count":1}],"total_commits":403,"total_committers":2,"total_bot_commits":0,"total_bot_committers":0,"mean_commits":201.5,"dds":0.002481389578163795,"past_year_committers":[{"name":"Ali Youssef","email":"aliali.mostafa99@gmail.com","login":"AliYoussef96","count":29}],"past_year_total_commits":29,"past_year_total_committers":1,"past_year_total_bot_commits":0,"past_year_total_bot_committers":0,"past_year_mean_commits":29.0,"past_year_dds":0.0,"last_synced_at":"2025-08-07T08:31:32.146Z","last_synced_commit":"0a9a00eede9f37197f5fa4e68c4662fac440077e","created_at":"2023-03-09T04:13:34.936Z","updated_at":"2025-08-07T08:31:32.147Z","commits_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories/AliYoussef96%2FBCAW-Tool/commits","host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-08-14T00:00:13.429Z","repositories_count":5478262,"commits_count":853214359,"contributors_count":31091431,"owners_count":906510,"icon_url":"https://github.com/github.png","host_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories"}},"issues_stats":{"full_name":"AliYoussef96/BCAW-Tool","html_url":"https://github.com/AliYoussef96/BCAW-Tool","last_synced_at":"2025-08-31T18:20:38.730Z","status":null,"issues_count":14,"pull_requests_count":1,"avg_time_to_close_issue":6114826.461538462,"avg_time_to_close_pull_request":2315.0,"issues_closed_count":13,"pull_requests_closed_count":1,"pull_request_authors_count":1,"issue_authors_count":4,"avg_comments_per_issue":1.7857142857142858,"avg_comments_per_pull_request":1.0,"merged_pull_requests_count":1,"bot_issues_count":0,"bot_pull_requests_count":0,"past_year_issues_count":0,"past_year_pull_requests_count":0,"past_year_avg_time_to_close_issue":null,"past_year_avg_time_to_close_pull_request":null,"past_year_issues_closed_count":0,"past_year_pull_requests_closed_count":0,"past_year_pull_request_authors_count":0,"past_year_issue_authors_count":0,"past_year_avg_comments_per_issue":null,"past_year_avg_comments_per_pull_request":null,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":0,"created_at":"2023-05-14T09:38:59.181Z","updated_at":"2025-08-31T18:20:38.732Z","repository_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/AliYoussef96%2FBCAW-Tool","issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/AliYoussef96%2FBCAW-Tool/issues","issue_labels_count":{"documentation":4},"pull_request_labels_count":{},"issue_author_associations_count":{"CONTRIBUTOR":11,"NONE":3},"pull_request_author_associations_count":{"CONTRIBUTOR":1},"issue_authors":{"Benjamin-Lee":11,"YDD99":1,"symonovar":1,"Liiii007":1},"pull_request_authors":{"Benjamin-Lee":1},"host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-08-31T00:00:11.523Z","repositories_count":9891070,"issues_count":28909389,"pull_requests_count":82639466,"authors_count":8334244,"icon_url":"https://github.com/github.png","host_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories","owners_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/owners","authors_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors"},"past_year_issue_labels_count":{},"past_year_pull_request_labels_count":{},"past_year_issue_author_associations_count":{},"past_year_pull_request_author_associations_count":{},"past_year_issue_authors":{},"past_year_pull_request_authors":{},"maintainers":[],"active_maintainers":[]},"events":{"total":{"IssuesEvent":1,"IssueCommentEvent":1,"PushEvent":25},"last_year":{"IssuesEvent":1,"IssueCommentEvent":1,"PushEvent":25}},"keywords":[],"dependencies":[{"ecosystem":"pypi","filepath":"requirements.txt","sha":null,"kind":"manifest","created_at":"2022-08-26T20:45:24.287Z","updated_at":"2022-08-26T20:45:24.287Z","repository_link":"https://github.com/AliYoussef96/BCAW-Tool/blob/master/requirements.txt","dependencies":[{"id":2854919308,"package_name":"biopython","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":2854919309,"package_name":"pandas","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":2854919310,"package_name":"CAI","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":2854919311,"package_name":"scipy","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":2854919312,"package_name":"matplotlib","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":2854919313,"package_name":"numpy","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":2854919314,"package_name":"prince","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false}]},{"ecosystem":"pypi","filepath":"setup.py","sha":null,"kind":"manifest","created_at":"2025-04-11T11:39:05.054Z","updated_at":"2025-04-11T11:39:05.054Z","repository_link":"https://github.com/AliYoussef96/BCAW-Tool/blob/master/setup.py","dependencies":[]}],"score":6.06842558824411,"created_at":"2025-09-04T09:18:01.260Z","updated_at":"2025-10-07T08:04:39.677Z","avatar_url":"https://github.com/AliYoussef96.png","language":"Python","category":"Scientific Software","sub_category":"Peer-reviewed","monthly_downloads":34,"funding_links":[],"readme_doi_urls":["https://doi.org/10.21105/joss.01500"],"works":{},"citation_counts":{},"total_citations":0,"keywords_from_contributors":[],"project_url":"https://science.ecosyste.ms/api/v1/projects/2419","html_url":"https://science.ecosyste.ms/projects/2419"}