{"id":243478,"name":null,"description":":notebook: Minimal cheatsheet for functions in the phyloseq R package","url":"https://github.com/erictleung/phyloseq-cheatsheet","last_synced_at":"2025-10-15T02:04:48.156Z","repository":{"id":72464202,"uuid":"176306313","full_name":"erictleung/phyloseq-cheatsheet","owner":"erictleung","description":":notebook: Minimal cheatsheet for functions in the phyloseq R package","archived":false,"fork":false,"pushed_at":"2021-05-08T17:13:07.000Z","size":516,"stargazers_count":6,"open_issues_count":0,"forks_count":0,"subscribers_count":0,"default_branch":"master","last_synced_at":"2025-04-05T02:11:40.683Z","etag":null,"topics":["bioconductor","bioinformatics","cheatsheet","data-analysis","microbiome","microbiota","notes","phyloseq","r"],"latest_commit_sha":null,"homepage":"","language":null,"has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"cc0-1.0","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/erictleung.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null}},"created_at":"2019-03-18T14:42:10.000Z","updated_at":"2024-01-24T15:49:09.000Z","dependencies_parsed_at":null,"dependency_job_id":"b9120124-6464-4645-bc15-1481c1497a44","html_url":"https://github.com/erictleung/phyloseq-cheatsheet","commit_stats":null,"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"purl":"pkg:github/erictleung/phyloseq-cheatsheet","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/erictleung%2Fphyloseq-cheatsheet","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/erictleung%2Fphyloseq-cheatsheet/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/erictleung%2Fphyloseq-cheatsheet/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/erictleung%2Fphyloseq-cheatsheet/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/erictleung","download_url":"https://codeload.github.com/erictleung/phyloseq-cheatsheet/tar.gz/refs/heads/master","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/erictleung%2Fphyloseq-cheatsheet/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":279033950,"owners_count":26089400,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-10-15T02:00:07.814Z","response_time":56,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"owner":{"login":"erictleung","name":"Eric Leung","uuid":"2754821","kind":"user","description":"Data science generalist. Sharing knowledge and optimizing tools for learning and growth. Open-source and open-data advocate. Community learner.","email":"","website":"https://erictleung.com","location":"New York, NY","twitter":null,"company":null,"icon_url":"https://avatars.githubusercontent.com/u/2754821?u=54e1cb2d18128defe85662ffded3a224e56adf88\u0026v=4","repositories_count":169,"last_synced_at":"2025-10-02T22:29:44.611Z","metadata":{"has_sponsors_listing":true,"funding":{"github":"erictleung","ko_fi":"erictleung","custom":["paypal.me/erictleung"]}},"html_url":"https://github.com/erictleung","funding_links":["https://github.com/sponsors/erictleung","https://ko-fi.com/erictleung","paypal.me/erictleung"],"total_stars":451,"followers":603,"following":196,"created_at":"2022-11-05T22:55:37.750Z","updated_at":"2025-10-02T22:29:44.611Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/erictleung","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/erictleung/repositories"},"packages":[],"commits":{"id":1585441,"full_name":"erictleung/phyloseq-cheatsheet","default_branch":"master","committers":[{"name":"Eric Leung","email":"eric@erictleung.com","login":"erictleung","count":25}],"total_commits":25,"total_committers":1,"total_bot_commits":0,"total_bot_committers":0,"mean_commits":25.0,"dds":0.0,"past_year_committers":[],"past_year_total_commits":0,"past_year_total_committers":0,"past_year_total_bot_commits":0,"past_year_total_bot_committers":0,"past_year_mean_commits":0.0,"past_year_dds":0.0,"last_synced_at":"2024-06-12T18:44:18.211Z","last_synced_commit":"7cdf213795fe5587fddade123d051ee893ddaf5f","created_at":"2024-06-11T18:29:49.671Z","updated_at":"2024-06-12T18:44:18.212Z","commits_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories/erictleung%2Fphyloseq-cheatsheet/commits","host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-10-15T00:00:20.065Z","repositories_count":6083717,"commits_count":925237193,"contributors_count":36104418,"owners_count":1107258,"icon_url":"https://github.com/github.png","host_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories"}},"issues_stats":{"full_name":"erictleung/phyloseq-cheatsheet","html_url":"https://github.com/erictleung/phyloseq-cheatsheet","last_synced_at":"2024-06-11T18:29:58.274Z","status":null,"issues_count":0,"pull_requests_count":0,"avg_time_to_close_issue":null,"avg_time_to_close_pull_request":null,"issues_closed_count":0,"pull_requests_closed_count":0,"pull_request_authors_count":0,"issue_authors_count":0,"avg_comments_per_issue":null,"avg_comments_per_pull_request":null,"merged_pull_requests_count":0,"bot_issues_count":0,"bot_pull_requests_count":0,"past_year_issues_count":0,"past_year_pull_requests_count":0,"past_year_avg_time_to_close_issue":null,"past_year_avg_time_to_close_pull_request":null,"past_year_issues_closed_count":0,"past_year_pull_requests_closed_count":0,"past_year_pull_request_authors_count":0,"past_year_issue_authors_count":0,"past_year_avg_comments_per_issue":null,"past_year_avg_comments_per_pull_request":null,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":0,"created_at":"2024-06-11T18:29:57.448Z","updated_at":"2024-06-11T18:29:58.275Z","repository_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/erictleung%2Fphyloseq-cheatsheet","issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/erictleung%2Fphyloseq-cheatsheet/issues","issue_labels_count":{},"pull_request_labels_count":{},"issue_author_associations_count":{},"pull_request_author_associations_count":{},"issue_authors":{},"pull_request_authors":{},"host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-10-15T00:00:10.436Z","repositories_count":10954166,"issues_count":32962296,"pull_requests_count":106786567,"authors_count":11036942,"icon_url":"https://github.com/github.png","host_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories","owners_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/owners","authors_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors"},"past_year_issue_labels_count":{},"past_year_pull_request_labels_count":{},"past_year_issue_author_associations_count":{},"past_year_pull_request_author_associations_count":{},"past_year_issue_authors":{},"past_year_pull_request_authors":{},"maintainers":[],"active_maintainers":[]},"events":{"total":{},"last_year":{}},"keywords":["bioconductor","bioinformatics","cheatsheet","data-analysis","microbiome","microbiota","notes","phyloseq","r"],"dependencies":[],"score":1.791759469228055,"created_at":"2025-09-09T08:48:41.392Z","updated_at":"2025-10-15T02:04:48.190Z","avatar_url":"https://github.com/erictleung.png","language":null,"category":null,"sub_category":null,"monthly_downloads":0,"funding_links":[],"readme_doi_urls":["https://doi.org/10.1371/journal.pone.0061217.g002","https://doi.org/10.1371/journal.pone.0061217.g003"],"works":{},"citation_counts":{},"total_citations":0,"keywords_from_contributors":[],"project_url":"https://science.ecosyste.ms/api/v1/projects/243478","html_url":"https://science.ecosyste.ms/projects/243478"}