{"id":27054,"name":"bio-epidemiology-ner","description":"Recognize bio-medical entities from a text corpus","url":"https://github.com/dreji18/bio-epidemiology-ner","last_synced_at":"2025-09-05T03:26:24.618Z","repository":{"id":40665471,"uuid":"507887977","full_name":"dreji18/Bio-Epidemiology-NER","owner":"dreji18","description":"Recognize bio-medical entities from a text corpus","archived":false,"fork":false,"pushed_at":"2023-08-11T13:34:00.000Z","size":17060,"stargazers_count":120,"open_issues_count":5,"forks_count":9,"subscribers_count":2,"default_branch":"main","last_synced_at":"2025-04-13T14:09:30.420Z","etag":null,"topics":["biomedical","epidemiology","ner","nlp","transformers"],"latest_commit_sha":null,"homepage":"","language":"Python","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":null,"status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/dreji18.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":null,"code_of_conduct":null,"threat_model":null,"audit":null,"citation":"CITATION.cff","codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null}},"created_at":"2022-06-27T11:51:34.000Z","updated_at":"2025-03-25T16:38:23.000Z","dependencies_parsed_at":"2025-04-13T14:19:35.262Z","dependency_job_id":null,"html_url":"https://github.com/dreji18/Bio-Epidemiology-NER","commit_stats":null,"previous_names":["dreji18/biomedicalner"],"tags_count":0,"template":false,"template_full_name":null,"purl":"pkg:github/dreji18/Bio-Epidemiology-NER","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/dreji18%2FBio-Epidemiology-NER","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/dreji18%2FBio-Epidemiology-NER/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/dreji18%2FBio-Epidemiology-NER/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/dreji18%2FBio-Epidemiology-NER/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/dreji18","download_url":"https://codeload.github.com/dreji18/Bio-Epidemiology-NER/tar.gz/refs/heads/main","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/dreji18%2FBio-Epidemiology-NER/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":273705920,"owners_count":25153442,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-09-05T02:00:09.113Z","response_time":402,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"owner":{"login":"dreji18","name":"Deepak John Reji","uuid":"49631017","kind":"user","description":"I am an NLP practitioner with experience in developing and structuring solutions for the data science environment","email":"","website":"https://www.youtube.com/channel/UCgOwsx5injeaB_TKGsVD5GQ","location":"Bangalore","twitter":null,"company":"ERM","icon_url":"https://avatars.githubusercontent.com/u/49631017?u=97ed84af2f8da87e4bcac5a6f549fff9bc914b42\u0026v=4","repositories_count":6,"last_synced_at":"2023-03-08T22:43:06.402Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/dreji18","funding_links":[],"total_stars":null,"followers":null,"following":null,"created_at":"2022-11-18T12:33:16.504Z","updated_at":"2023-03-08T22:43:06.651Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/dreji18","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/dreji18/repositories"},"packages":null,"commits":{"id":1395248,"full_name":"dreji18/Bio-Epidemiology-NER","default_branch":"main","committers":[{"name":"Deepak John Reji","email":"49631017+dreji18","login":"dreji18","count":45},{"name":"shainaraza","email":"32249936+shainaraza","login":"shainaraza","count":3},{"name":"deepak","email":"deepakjohn1994@gmail.com","login":null,"count":2}],"total_commits":50,"total_committers":3,"total_bot_commits":0,"total_bot_committers":0,"mean_commits":16.666666666666668,"dds":0.09999999999999998,"past_year_committers":[{"name":"Deepak John Reji","email":"49631017+dreji18","login":"dreji18","count":20}],"past_year_total_commits":20,"past_year_total_committers":1,"past_year_total_bot_commits":0,"past_year_total_bot_committers":0,"past_year_mean_commits":20.0,"past_year_dds":0.0,"last_synced_at":"2024-01-25T13:38:22.239Z","last_synced_commit":"ef8ad4981159f32579ff5a5118cdf72f147d77b4","created_at":"2023-09-29T11:10:15.566Z","updated_at":"2024-01-25T13:38:22.240Z","commits_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories/dreji18%2FBio-Epidemiology-NER/commits","host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-05T00:00:10.343Z","repositories_count":5480019,"commits_count":853389012,"contributors_count":31098138,"owners_count":906558,"icon_url":"https://github.com/github.png","host_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories"}},"issues_stats":{"full_name":"dreji18/Bio-Epidemiology-NER","html_url":"https://github.com/dreji18/Bio-Epidemiology-NER","last_synced_at":"2024-08-09T11:58:27.969Z","status":null,"issues_count":12,"pull_requests_count":0,"avg_time_to_close_issue":8322090.5,"avg_time_to_close_pull_request":null,"issues_closed_count":8,"pull_requests_closed_count":0,"pull_request_authors_count":0,"issue_authors_count":12,"avg_comments_per_issue":3.4166666666666665,"avg_comments_per_pull_request":null,"merged_pull_requests_count":0,"bot_issues_count":0,"bot_pull_requests_count":0,"past_year_issues_count":3,"past_year_pull_requests_count":0,"past_year_avg_time_to_close_issue":6768401.0,"past_year_avg_time_to_close_pull_request":null,"past_year_issues_closed_count":2,"past_year_pull_requests_closed_count":0,"past_year_pull_request_authors_count":0,"past_year_issue_authors_count":3,"past_year_avg_comments_per_issue":1.0,"past_year_avg_comments_per_pull_request":null,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":0,"created_at":"2023-05-15T03:59:16.707Z","updated_at":"2025-09-02T04:57:16.758Z","repository_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/dreji18%2FBio-Epidemiology-NER","issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/dreji18%2FBio-Epidemiology-NER/issues","issue_labels_count":{},"pull_request_labels_count":{},"issue_author_associations_count":{"NONE":11,"COLLABORATOR":1},"pull_request_author_associations_count":{"NONE":1},"issue_authors":{"mysteryjeans":1,"juanwisz":1,"hopez2024":1,"parthplc":1,"yonigottesman":1,"BhavyaShah1234":1,"dustn1259":1,"paritoshk":1,"karla-desouza":1,"savarander":1,"Arjuman23":1,"WhiteWolf47":1},"pull_request_authors":{"kamelCased":1},"host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-05T00:00:10.444Z","repositories_count":10083537,"issues_count":31240276,"pull_requests_count":96185051,"authors_count":10694683,"icon_url":"https://github.com/github.png","host_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories","owners_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/owners","authors_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors"},"past_year_issue_labels_count":{},"past_year_pull_request_labels_count":{},"past_year_issue_author_associations_count":{},"past_year_pull_request_author_associations_count":{},"past_year_issue_authors":{},"past_year_pull_request_authors":{},"maintainers":[{"login":"karla-desouza","count":1,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/karla-desouza"}],"active_maintainers":[]},"events":{"total":{"WatchEvent":14,"IssueCommentEvent":3,"ForkEvent":1},"last_year":{"WatchEvent":14,"IssueCommentEvent":3,"ForkEvent":1}},"keywords":["biomedical","epidemiology","ner","nlp","transformers"],"dependencies":[{"ecosystem":"pypi","filepath":"requirements.txt","sha":null,"kind":"manifest","created_at":"2022-08-13T05:50:08.641Z","updated_at":"2022-08-13T05:50:08.641Z","repository_link":"https://github.com/dreji18/Bio-Epidemiology-NER/blob/main/requirements.txt","dependencies":[{"id":1403685879,"package_name":"transformers","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":1403685880,"package_name":"pandas","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":1403685881,"package_name":"nltk","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false}]},{"ecosystem":"pypi","filepath":"setup.py","sha":null,"kind":"manifest","created_at":"2025-04-13T14:19:35.194Z","updated_at":"2025-04-13T14:19:35.194Z","repository_link":"https://github.com/dreji18/Bio-Epidemiology-NER/blob/main/setup.py","dependencies":[]}],"score":5.9269260259704115,"created_at":"2025-09-04T15:50:59.314Z","updated_at":"2025-10-07T08:12:04.621Z","avatar_url":"https://github.com/dreji18.png","language":"Python","category":null,"sub_category":null,"monthly_downloads":0,"funding_links":["https://www.buymeacoffee.com/deepakjohnreji"],"readme_doi_urls":[],"works":{},"citation_counts":{},"total_citations":0,"keywords_from_contributors":[],"project_url":"https://science.ecosyste.ms/api/v1/projects/27054","html_url":"https://science.ecosyste.ms/projects/27054","bibtex_url":"https://science.ecosyste.ms/projects/27054/export.bibtex","apalike_url":"https://science.ecosyste.ms/projects/27054/export.apalike"}