{"id":288125,"name":null,"description":"ClonalFrameML: Efficient Inference of Recombination in Whole Bacterial Genomes","url":"https://github.com/hcdenbakker/clonalframeml","last_synced_at":"2025-10-16T20:58:57.743Z","repository":{"id":110703562,"uuid":"45705367","full_name":"hcdenbakker/ClonalFrameML","owner":"hcdenbakker","description":"ClonalFrameML: Efficient Inference of Recombination in Whole Bacterial Genomes","archived":false,"fork":true,"pushed_at":"2015-10-28T09:35:52.000Z","size":669,"stargazers_count":0,"open_issues_count":0,"forks_count":1,"subscribers_count":2,"default_branch":"master","last_synced_at":"2023-03-05T06:39:24.729Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":"","language":"C++","has_issues":false,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":"xavierdidelot/ClonalFrameML","license":null,"status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/hcdenbakker.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":null,"code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null}},"created_at":"2015-11-06T20:21:37.000Z","updated_at":"2023-03-07T13:21:53.846Z","dependencies_parsed_at":"2023-03-13T13:49:30.307Z","dependency_job_id":null,"html_url":"https://github.com/hcdenbakker/ClonalFrameML","commit_stats":null,"previous_names":[],"tags_count":null,"template":null,"template_full_name":null,"purl":"pkg:github/hcdenbakker/ClonalFrameML","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/hcdenbakker%2FClonalFrameML","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/hcdenbakker%2FClonalFrameML/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/hcdenbakker%2FClonalFrameML/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/hcdenbakker%2FClonalFrameML/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/hcdenbakker","download_url":"https://codeload.github.com/hcdenbakker/ClonalFrameML/tar.gz/refs/heads/master","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/hcdenbakker%2FClonalFrameML/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":279240212,"owners_count":26132301,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-10-16T02:00:06.019Z","response_time":53,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"owner":{"login":"hcdenbakker","name":"Henk den Bakker","uuid":"13696884","kind":"user","description":"","email":"","website":null,"location":"Griffin, GA, USA","twitter":null,"company":"Center for Food Safety, University of Georgia","icon_url":"https://avatars.githubusercontent.com/u/13696884?v=4","repositories_count":7,"last_synced_at":"2023-03-05T06:37:26.500Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/hcdenbakker","funding_links":[],"total_stars":null,"followers":null,"following":null,"created_at":"2022-11-15T07:38:32.435Z","updated_at":"2023-03-05T06:37:26.573Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/hcdenbakker","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/hcdenbakker/repositories"},"packages":[],"commits":{"message":"Repository syncing started."},"issues_stats":{"full_name":"hcdenbakker/clonalframeml","html_url":"https://github.com/hcdenbakker/clonalframeml","last_synced_at":null,"status":null,"issues_count":null,"pull_requests_count":null,"avg_time_to_close_issue":null,"avg_time_to_close_pull_request":null,"issues_closed_count":null,"pull_requests_closed_count":null,"pull_request_authors_count":null,"issue_authors_count":null,"avg_comments_per_issue":null,"avg_comments_per_pull_request":null,"merged_pull_requests_count":null,"bot_issues_count":null,"bot_pull_requests_count":null,"past_year_issues_count":null,"past_year_pull_requests_count":null,"past_year_avg_time_to_close_issue":null,"past_year_avg_time_to_close_pull_request":null,"past_year_issues_closed_count":null,"past_year_pull_requests_closed_count":null,"past_year_pull_request_authors_count":null,"past_year_issue_authors_count":null,"past_year_avg_comments_per_issue":null,"past_year_avg_comments_per_pull_request":null,"past_year_bot_issues_count":null,"past_year_bot_pull_requests_count":null,"past_year_merged_pull_requests_count":null,"created_at":"2025-10-16T20:58:57.438Z","updated_at":"2025-10-16T20:58:57.438Z","repository_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/hcdenbakker%2Fclonalframeml","issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/hcdenbakker%2Fclonalframeml/issues","issue_labels_count":{},"pull_request_labels_count":{},"issue_author_associations_count":{},"pull_request_author_associations_count":{},"issue_authors":{},"pull_request_authors":{},"host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-10-16T00:00:07.423Z","repositories_count":10996418,"issues_count":34098873,"pull_requests_count":110459349,"authors_count":11038014,"icon_url":"https://github.com/github.png","host_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories","owners_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/owners","authors_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors"},"past_year_issue_labels_count":{},"past_year_pull_request_labels_count":{},"past_year_issue_author_associations_count":{},"past_year_pull_request_author_associations_count":{},"past_year_issue_authors":{},"past_year_pull_request_authors":{},"maintainers":[],"active_maintainers":[]},"events":{"total":{},"last_year":{}},"keywords":[],"dependencies":[],"score":null,"created_at":"2025-09-09T13:21:31.102Z","updated_at":"2025-10-16T20:58:57.789Z","avatar_url":"https://github.com/hcdenbakker.png","language":"C++","category":null,"sub_category":null,"monthly_downloads":0,"funding_links":[],"readme_doi_urls":[],"works":{},"citation_counts":{},"total_citations":0,"keywords_from_contributors":[],"project_url":"https://science.ecosyste.ms/api/v1/projects/288125","html_url":"https://science.ecosyste.ms/projects/288125"}