{"id":2917,"name":"Finch","description":"Finch: a tool adding dynamic abundance filtering to genomic MinHashing - Published in JOSS (2018)","url":"https://github.com/onecodex/finch-rs","last_synced_at":"2025-09-04T16:56:49.900Z","repository":{"id":19159697,"uuid":"77661950","full_name":"onecodex/finch-rs","owner":"onecodex","description":"A genomic minhashing implementation in Rust","archived":false,"fork":false,"pushed_at":"2025-06-17T23:22:52.000Z","size":388,"stargazers_count":99,"open_issues_count":15,"forks_count":8,"subscribers_count":17,"default_branch":"master","last_synced_at":"2025-08-28T02:32:34.476Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":"https://www.onecodex.com","language":"Rust","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"mit","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/onecodex.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE.txt","code_of_conduct":"CODE_OF_CONDUCT.md","threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null}},"created_at":"2016-12-30T05:09:18.000Z","updated_at":"2025-06-25T13:42:47.000Z","dependencies_parsed_at":"2025-07-15T07:52:07.738Z","dependency_job_id":"937b0223-83e9-4dfc-9127-08a450173a42","html_url":"https://github.com/onecodex/finch-rs","commit_stats":{"total_commits":123,"total_committers":16,"mean_commits":7.6875,"dds":0.4552845528455285,"last_synced_commit":"28e7069b2fb48b8682ddc9803154cae3ba8f2846"},"previous_names":[],"tags_count":17,"template":false,"template_full_name":null,"purl":"pkg:github/onecodex/finch-rs","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/onecodex","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/refs/heads/master","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/sbom","scorecard":{"id":706930,"data":{"date":"2025-08-11","repo":{"name":"github.com/onecodex/finch-rs","commit":"bb481c04876aef95200547ef4da8622f634a029e"},"scorecard":{"version":"v5.2.1-40-gf6ed084d","commit":"f6ed084d17c9236477efd66e5b258b9d4cc7b389"},"score":3.3,"checks":[{"name":"Maintained","score":5,"reason":"6 commit(s) and 0 issue activity found in the last 90 days -- score normalized to 5","details":null,"documentation":{"short":"Determines if the project is \"actively maintained\".","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#maintained"}},{"name":"Dangerous-Workflow","score":10,"reason":"no dangerous workflow patterns detected","details":null,"documentation":{"short":"Determines if the project's GitHub Action workflows avoid dangerous patterns.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#dangerous-workflow"}},{"name":"Binary-Artifacts","score":10,"reason":"no binaries found in the repo","details":null,"documentation":{"short":"Determines if the project has generated executable (binary) artifacts in the source repository.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#binary-artifacts"}},{"name":"Code-Review","score":7,"reason":"Found 8/11 approved changesets -- score normalized to 7","details":null,"documentation":{"short":"Determines if the project requires human code review before pull requests (aka merge requests) are merged.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#code-review"}},{"name":"Packaging","score":-1,"reason":"packaging workflow not detected","details":["Warn: no GitHub/GitLab publishing workflow detected."],"documentation":{"short":"Determines if the project is published as a package that others can easily download, install, easily update, and uninstall.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#packaging"}},{"name":"Token-Permissions","score":0,"reason":"detected GitHub workflow tokens with excessive permissions","details":["Warn: jobLevel 'contents' permission set to 'write': .github/workflows/release.yml:118","Warn: no topLevel permission defined: .github/workflows/ci.yml:1","Warn: no topLevel permission defined: .github/workflows/release.yml:1"],"documentation":{"short":"Determines if the project's workflows follow the principle of least privilege.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#token-permissions"}},{"name":"CII-Best-Practices","score":0,"reason":"no effort to earn an OpenSSF best practices badge detected","details":null,"documentation":{"short":"Determines if the project has an OpenSSF (formerly CII) Best Practices Badge.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#cii-best-practices"}},{"name":"Security-Policy","score":0,"reason":"security policy file not detected","details":["Warn: no security policy file detected","Warn: no security file to analyze","Warn: no security file to analyze","Warn: no security file to analyze"],"documentation":{"short":"Determines if the project has published a security policy.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#security-policy"}},{"name":"Fuzzing","score":0,"reason":"project is not fuzzed","details":["Warn: no fuzzer integrations found"],"documentation":{"short":"Determines if the project uses fuzzing.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#fuzzing"}},{"name":"License","score":10,"reason":"license file detected","details":["Info: project has a license file: LICENSE.txt:0","Info: FSF or OSI recognized license: MIT License: LICENSE.txt:0"],"documentation":{"short":"Determines if the project has defined a license.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#license"}},{"name":"Pinned-Dependencies","score":0,"reason":"dependency not pinned by hash detected -- score normalized to 0","details":["Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/ci.yml:70: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/ci.yml/master?enable=pin","Warn: third-party GitHubAction not pinned by hash: .github/workflows/ci.yml:72: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/ci.yml/master?enable=pin","Warn: third-party GitHubAction not pinned by hash: .github/workflows/ci.yml:78: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/ci.yml/master?enable=pin","Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/ci.yml:87: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/ci.yml/master?enable=pin","Warn: third-party GitHubAction not pinned by hash: .github/workflows/ci.yml:89: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/ci.yml/master?enable=pin","Warn: third-party GitHubAction not pinned by hash: .github/workflows/ci.yml:95: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/ci.yml/master?enable=pin","Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/ci.yml:13: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/ci.yml/master?enable=pin","Warn: third-party GitHubAction not pinned by hash: .github/workflows/ci.yml:15: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/ci.yml/master?enable=pin","Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/ci.yml:52: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/ci.yml/master?enable=pin","Warn: third-party GitHubAction not pinned by hash: .github/workflows/ci.yml:54: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/ci.yml/master?enable=pin","Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/release.yml:32: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/release.yml/master?enable=pin","Warn: third-party GitHubAction not pinned by hash: .github/workflows/release.yml:34: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/release.yml/master?enable=pin","Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/release.yml:41: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/release.yml/master?enable=pin","Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/release.yml:60: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/release.yml/master?enable=pin","Warn: third-party GitHubAction not pinned by hash: .github/workflows/release.yml:62: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/release.yml/master?enable=pin","Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/release.yml:69: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/release.yml/master?enable=pin","Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/release.yml:77: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/release.yml/master?enable=pin","Warn: third-party GitHubAction not pinned by hash: .github/workflows/release.yml:79: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/release.yml/master?enable=pin","Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/release.yml:84: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/release.yml/master?enable=pin","Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/release.yml:96: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/release.yml/master?enable=pin","Warn: third-party GitHubAction not pinned by hash: .github/workflows/release.yml:102: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/release.yml/master?enable=pin","Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/release.yml:122: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/release.yml/master?enable=pin","Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/release.yml:124: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/release.yml/master?enable=pin","Warn: third-party GitHubAction not pinned by hash: .github/workflows/release.yml:130: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/release.yml/master?enable=pin","Warn: containerImage not pinned by hash: Dockerfile:5","Warn: containerImage not pinned by hash: Dockerfile:15: pin your Docker image by updating python:3.7-slim-stretch to python:3.7-slim-stretch@sha256:649b13bc3e6a70f7722d5eba4d78afbf4e9cec63193a29148271124840013286","Warn: pipCommand not pinned by hash: .github/workflows/ci.yml:31","Warn: pipCommand not pinned by hash: .github/workflows/ci.yml:32","Info:   0 out of  13 GitHub-owned GitHubAction dependencies pinned","Info:   0 out of  11 third-party GitHubAction dependencies pinned","Info:   0 out of   2 containerImage dependencies pinned","Info:   0 out of   2 pipCommand dependencies pinned"],"documentation":{"short":"Determines if the project has declared and pinned the dependencies of its build process.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#pinned-dependencies"}},{"name":"Branch-Protection","score":0,"reason":"branch protection not enabled on development/release branches","details":["Warn: branch protection not enabled for branch 'master'"],"documentation":{"short":"Determines if the default and release branches are protected with GitHub's branch protection settings.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#branch-protection"}},{"name":"Signed-Releases","score":0,"reason":"Project has not signed or included provenance with any releases.","details":["Warn: release artifact v0.6.2 not signed: https://api.github.com/repos/onecodex/finch-rs/releases/226021649","Warn: release artifact v0.6.2 does not have provenance: https://api.github.com/repos/onecodex/finch-rs/releases/226021649"],"documentation":{"short":"Determines if the project cryptographically signs release artifacts.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#signed-releases"}},{"name":"SAST","score":0,"reason":"SAST tool is not run on all commits -- score normalized to 0","details":["Warn: 0 commits out of 28 are checked with a SAST tool"],"documentation":{"short":"Determines if the project uses static code analysis.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#sast"}},{"name":"Vulnerabilities","score":0,"reason":"10 existing vulnerabilities detected","details":["Warn: Project is vulnerable to: RUSTSEC-2021-0139","Warn: Project is vulnerable to: RUSTSEC-2021-0145 / GHSA-g98v-hv3f-hcfr","Warn: Project is vulnerable to: RUSTSEC-2024-0375","Warn: Project is vulnerable to: RUSTSEC-2023-0028","Warn: Project is vulnerable to: RUSTSEC-2024-0384","Warn: Project is vulnerable to: RUSTSEC-2020-0077","Warn: Project is vulnerable to: GHSA-pph8-gcv7-4qj5","Warn: Project is vulnerable to: RUSTSEC-2025-0020","Warn: Project is vulnerable to: RUSTSEC-2023-0018 / GHSA-mc8h-8q98-g5hr","Warn: Project is vulnerable to: RUSTSEC-2023-0081"],"documentation":{"short":"Determines if the project has open, known unfixed vulnerabilities.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#vulnerabilities"}}]},"last_synced_at":"2025-08-22T06:53:56.403Z","repository_id":19159697,"created_at":"2025-08-22T06:53:56.403Z","updated_at":"2025-08-22T06:53:56.403Z"},"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":273523663,"owners_count":25120864,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-09-03T02:00:09.631Z","response_time":76,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"owner":{"login":"onecodex","name":"One Codex","uuid":"7833433","kind":"organization","description":"","email":"hello@onecodex.com","website":null,"location":null,"twitter":null,"company":null,"icon_url":"https://avatars.githubusercontent.com/u/7833433?v=4","repositories_count":60,"last_synced_at":"2024-04-17T18:11:07.659Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/onecodex","funding_links":[],"total_stars":374,"followers":13,"following":0,"created_at":"2022-11-06T01:58:24.442Z","updated_at":"2024-04-17T18:11:17.805Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/onecodex","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/onecodex/repositories"},"packages":[{"id":2733710,"name":"finch-sketch","ecosystem":"pypi","description":"An implementation of min-wise independent permutation locality sensitive hashing ('MinHashing') for genomic data and command-line utility for manipulation.","homepage":null,"licenses":"MIT","normalized_licenses":["MIT"],"repository_url":"https://github.com/onecodex/finch-rs","keywords_array":["minhash","bioinformatics","sketches"],"namespace":null,"versions_count":5,"first_release_published_at":"2019-12-06T20:04:41.000Z","latest_release_published_at":"2025-06-17T23:25:46.000Z","latest_release_number":"0.6.2","last_synced_at":"2025-09-03T23:11:07.950Z","created_at":"2022-04-10T10:59:48.811Z","updated_at":"2025-09-03T23:11:07.950Z","registry_url":"https://pypi.org/project/finch-sketch/","install_command":"pip install finch-sketch --index-url https://pypi.org/simple","documentation_url":"https://finch-sketch.readthedocs.io/","metadata":{"funding":null,"documentation":null,"classifiers":[],"normalized_name":"finch-sketch","project_status":null},"repo_metadata":{"id":19159697,"uuid":"77661950","full_name":"onecodex/finch-rs","owner":"onecodex","description":"A genomic minhashing implementation in Rust","archived":false,"fork":false,"pushed_at":"2024-01-15T17:12:12.000Z","size":462,"stargazers_count":92,"open_issues_count":17,"forks_count":8,"subscribers_count":18,"default_branch":"master","last_synced_at":"2024-09-08T09:08:54.227Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":"https://www.onecodex.com","language":"Rust","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"mit","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/onecodex.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE.txt","code_of_conduct":"CODE_OF_CONDUCT.md","threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null}},"created_at":"2016-12-30T05:09:18.000Z","updated_at":"2024-08-18T19:18:24.000Z","dependencies_parsed_at":"2024-03-19T05:49:00.320Z","dependency_job_id":null,"html_url":"https://github.com/onecodex/finch-rs","commit_stats":{"total_commits":123,"total_committers":16,"mean_commits":7.6875,"dds":0.4552845528455285,"last_synced_commit":"28e7069b2fb48b8682ddc9803154cae3ba8f2846"},"previous_names":[],"tags_count":16,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/onecodex","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/refs/heads/master","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":219868455,"owners_count":16555616,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"},"owner_record":{"login":"onecodex","name":"One Codex","uuid":"7833433","kind":"organization","description":"","email":"hello@onecodex.com","website":null,"location":null,"twitter":null,"company":null,"icon_url":"https://avatars.githubusercontent.com/u/7833433?v=4","repositories_count":60,"last_synced_at":"2024-04-17T18:11:07.659Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/onecodex","funding_links":[],"total_stars":374,"followers":13,"following":0,"created_at":"2022-11-06T01:58:24.442Z","updated_at":"2024-04-17T18:11:17.805Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/onecodex","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/onecodex/repositories"},"tags":[{"name":"v0.5.0","sha":"a316f29636267266c13b697ec0019b172d7bc719","kind":"commit","published_at":"2022-12-13T12:56:59.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/v0.5.0","html_url":"https://github.com/onecodex/finch-rs/releases/tag/v0.5.0","dependencies_parsed_at":null,"dependency_job_id":null,"tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.5.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.5.0/manifests"},{"name":"v0.4.3","sha":"2e51b729c5c821e5a26bf97afbe91711291a867c","kind":"commit","published_at":"2022-09-09T17:36:31.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/v0.4.3","html_url":"https://github.com/onecodex/finch-rs/releases/tag/v0.4.3","dependencies_parsed_at":null,"dependency_job_id":null,"tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.4.3","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.4.3/manifests"},{"name":"v0.4.2","sha":"fb7f18c251de7eb4a32a2ceb922f27ce08d5372b","kind":"commit","published_at":"2022-09-08T19:17:12.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/v0.4.2","html_url":"https://github.com/onecodex/finch-rs/releases/tag/v0.4.2","dependencies_parsed_at":null,"dependency_job_id":null,"tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.4.2","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.4.2/manifests"},{"name":"v0.4.1","sha":"f5f4773d5c0990b6277b6152f97d8d7a3f12385a","kind":"commit","published_at":"2021-07-12T13:19:34.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/v0.4.1","html_url":"https://github.com/onecodex/finch-rs/releases/tag/v0.4.1","dependencies_parsed_at":null,"dependency_job_id":null,"tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.4.1","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.4.1/manifests"},{"name":"v0.3.0","sha":"65fa21c15e0588d991476065a319729a5d6ba0fa","kind":"commit","published_at":"2019-12-04T22:00:52.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/v0.3.0","html_url":"https://github.com/onecodex/finch-rs/releases/tag/v0.3.0","dependencies_parsed_at":null,"dependency_job_id":null,"tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.3.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.3.0/manifests"},{"name":"v0.2.0","sha":"94f9cc9fa5528999c28520638e6b5dce17961394","kind":"commit","published_at":"2019-04-09T17:18:28.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/v0.2.0","html_url":"https://github.com/onecodex/finch-rs/releases/tag/v0.2.0","dependencies_parsed_at":null,"dependency_job_id":null,"tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.2.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.2.0/manifests"},{"name":"v0.1.9","sha":"462455c1684d6ff01d1da0b4772b102f87c453da","kind":"commit","published_at":"2018-08-27T16:38:00.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/v0.1.9","html_url":"https://github.com/onecodex/finch-rs/releases/tag/v0.1.9","dependencies_parsed_at":null,"dependency_job_id":null,"tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.9","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.9/manifests"},{"name":"v0.1.8","sha":"5cf7945db21a4f7f49f3cfbacbc5081e9e6b39bd","kind":"commit","published_at":"2018-08-24T15:23:03.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/v0.1.8","html_url":"https://github.com/onecodex/finch-rs/releases/tag/v0.1.8","dependencies_parsed_at":null,"dependency_job_id":null,"tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.8","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.8/manifests"},{"name":"v0.1.7","sha":"21ad1b8aadb2eee127848ed5ba66f8e18297c448","kind":"commit","published_at":"2018-08-21T22:43:50.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/v0.1.7","html_url":"https://github.com/onecodex/finch-rs/releases/tag/v0.1.7","dependencies_parsed_at":null,"dependency_job_id":null,"tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.7","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.7/manifests"},{"name":"v0.1.6","sha":"95287397968c198a785023a6c4c838cd96f50b86","kind":"commit","published_at":"2018-06-06T20:38:50.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/v0.1.6","html_url":"https://github.com/onecodex/finch-rs/releases/tag/v0.1.6","dependencies_parsed_at":null,"dependency_job_id":null,"tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.6","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.6/manifests"},{"name":"joss","sha":"3180086e46a718891ad622bf85e270c3b0c2c415","kind":"commit","published_at":"2018-01-30T18:53:03.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/joss","html_url":"https://github.com/onecodex/finch-rs/releases/tag/joss","dependencies_parsed_at":null,"dependency_job_id":null,"tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/joss","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/joss/manifests"},{"name":"v0.1.5","sha":"eb41de679091ea4d99d354fb54b9bea59f4ed435","kind":"commit","published_at":"2018-01-16T23:36:53.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/v0.1.5","html_url":"https://github.com/onecodex/finch-rs/releases/tag/v0.1.5","dependencies_parsed_at":null,"dependency_job_id":null,"tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.5","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.5/manifests"},{"name":"v0.1.4","sha":"fd7e52f9ccaccb6162b0a5f4f8f98b55da99472f","kind":"commit","published_at":"2017-10-31T03:56:03.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/v0.1.4","html_url":"https://github.com/onecodex/finch-rs/releases/tag/v0.1.4","dependencies_parsed_at":null,"dependency_job_id":null,"tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.4","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.4/manifests"},{"name":"v0.1.3","sha":"1c61cb27589072123a4bd7d6a7ca8120d186bfbd","kind":"commit","published_at":"2017-09-14T18:32:51.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/v0.1.3","html_url":"https://github.com/onecodex/finch-rs/releases/tag/v0.1.3","dependencies_parsed_at":null,"dependency_job_id":null,"tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.3","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.3/manifests"},{"name":"v0.1.2","sha":"bddb6adb220d68695f7552ea56eff61bfb6299fe","kind":"commit","published_at":"2017-08-24T17:14:42.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/v0.1.2","html_url":"https://github.com/onecodex/finch-rs/releases/tag/v0.1.2","dependencies_parsed_at":null,"dependency_job_id":null,"tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.2","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.2/manifests"},{"name":"v0.1.0","sha":"b6f36b8c0b35e64eaa3a3bba71eb9f4af946ada6","kind":"commit","published_at":"2017-03-28T00:29:28.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/v0.1.0","html_url":"https://github.com/onecodex/finch-rs/releases/tag/v0.1.0","dependencies_parsed_at":null,"dependency_job_id":null,"tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.0/manifests"}]},"repo_metadata_updated_at":"2024-10-08T10:56:07.119Z","dependent_packages_count":0,"downloads":131,"downloads_period":"last-month","dependent_repos_count":1,"rankings":{"downloads":81.75864227003564,"dependent_repos_count":21.5515601217656,"dependent_packages_count":10.117827917587048,"stargazers_count":7.527769324406573,"forks_count":11.922953988523767,"docker_downloads_count":null,"average":26.575750724463724},"purl":"pkg:pypi/finch-sketch","advisories":[],"docker_usage_url":"https://docker.ecosyste.ms/usage/pypi/finch-sketch","docker_dependents_count":null,"docker_downloads_count":null,"usage_url":"https://repos.ecosyste.ms/usage/pypi/finch-sketch","dependent_repositories_url":"https://repos.ecosyste.ms/api/v1/usage/pypi/finch-sketch/dependencies","status":null,"funding_links":[],"critical":null,"issue_metadata":{"last_synced_at":"2024-10-08T05:50:57.058Z","issues_count":59,"pull_requests_count":38,"avg_time_to_close_issue":14994141.515151516,"avg_time_to_close_pull_request":1355340.361111111,"issues_closed_count":33,"pull_requests_closed_count":36,"pull_request_authors_count":13,"issue_authors_count":13,"avg_comments_per_issue":1.5932203389830508,"avg_comments_per_pull_request":0.5526315789473685,"merged_pull_requests_count":32,"bot_issues_count":0,"bot_pull_requests_count":2,"past_year_issues_count":1,"past_year_pull_requests_count":2,"past_year_avg_time_to_close_issue":3818301.0,"past_year_avg_time_to_close_pull_request":225098.0,"past_year_issues_closed_count":1,"past_year_pull_requests_closed_count":1,"past_year_pull_request_authors_count":1,"past_year_issue_authors_count":1,"past_year_avg_comments_per_issue":2.0,"past_year_avg_comments_per_pull_request":0.0,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":1,"issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/issues","maintainers":[],"active_maintainers":[]},"versions_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/packages/finch-sketch/versions","version_numbers_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/packages/finch-sketch/version_numbers","dependent_packages_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/packages/finch-sketch/dependent_packages","related_packages_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/packages/finch-sketch/related_packages","maintainers":[{"uuid":"referencegenomics","login":"referencegenomics","name":null,"email":null,"url":null,"packages_count":5,"html_url":"https://pypi.org/user/referencegenomics/","role":null,"created_at":"2023-02-24T05:38:35.537Z","updated_at":"2023-02-24T05:38:35.537Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/maintainers/referencegenomics/packages"}],"registry":{"name":"pypi.org","url":"https://pypi.org","ecosystem":"pypi","default":true,"packages_count":724747,"maintainers_count":308195,"namespaces_count":0,"keywords_count":237984,"github":"pypi","metadata":{"funded_packages_count":50481},"icon_url":"https://github.com/pypi.png","created_at":"2022-04-04T15:19:23.364Z","updated_at":"2025-09-04T05:23:51.177Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/packages","maintainers_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/maintainers","namespaces_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/namespaces"}},{"id":4087965,"name":"finch","ecosystem":"cargo","description":"An implementation of min-wise independent permutation locality sensitive hashing ('MinHashing') for genomic data and command-line utility for manipulation.","homepage":null,"licenses":"MIT","normalized_licenses":["MIT"],"repository_url":"https://github.com/onecodex/finch-rs","keywords_array":["bioinformatics","minhash","sketches"],"namespace":null,"versions_count":19,"first_release_published_at":"2017-03-28T00:32:07.529Z","latest_release_published_at":"2025-06-17T23:24:57.093Z","latest_release_number":"0.6.2","last_synced_at":"2025-09-03T23:11:07.372Z","created_at":"2022-04-12T12:31:40.574Z","updated_at":"2025-09-04T10:14:03.572Z","registry_url":"https://crates.io/crates/finch/","install_command":"cargo install finch","documentation_url":"https://docs.rs/finch/","metadata":{"categories":["science"]},"repo_metadata":{"id":19159697,"uuid":"77661950","full_name":"onecodex/finch-rs","owner":"onecodex","description":"A genomic minhashing implementation in Rust","archived":false,"fork":false,"pushed_at":"2025-06-17T23:22:52.000Z","size":388,"stargazers_count":99,"open_issues_count":15,"forks_count":8,"subscribers_count":17,"default_branch":"master","last_synced_at":"2025-08-28T02:32:34.476Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":"https://www.onecodex.com","language":"Rust","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"mit","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/onecodex.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE.txt","code_of_conduct":"CODE_OF_CONDUCT.md","threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null}},"created_at":"2016-12-30T05:09:18.000Z","updated_at":"2025-06-25T13:42:47.000Z","dependencies_parsed_at":"2025-07-15T07:52:07.738Z","dependency_job_id":"937b0223-83e9-4dfc-9127-08a450173a42","html_url":"https://github.com/onecodex/finch-rs","commit_stats":{"total_commits":123,"total_committers":16,"mean_commits":7.6875,"dds":0.4552845528455285,"last_synced_commit":"28e7069b2fb48b8682ddc9803154cae3ba8f2846"},"previous_names":[],"tags_count":17,"template":false,"template_full_name":null,"purl":"pkg:github/onecodex/finch-rs","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/onecodex","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/refs/heads/master","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/sbom","scorecard":{"id":706930,"data":{"date":"2025-08-11","repo":{"name":"github.com/onecodex/finch-rs","commit":"bb481c04876aef95200547ef4da8622f634a029e"},"scorecard":{"version":"v5.2.1-40-gf6ed084d","commit":"f6ed084d17c9236477efd66e5b258b9d4cc7b389"},"score":3.3,"checks":[{"name":"Maintained","score":5,"reason":"6 commit(s) and 0 issue activity found in the last 90 days -- score normalized to 5","details":null,"documentation":{"short":"Determines if the project is \"actively maintained\".","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#maintained"}},{"name":"Dangerous-Workflow","score":10,"reason":"no dangerous workflow patterns detected","details":null,"documentation":{"short":"Determines if the project's GitHub Action workflows avoid dangerous patterns.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#dangerous-workflow"}},{"name":"Binary-Artifacts","score":10,"reason":"no binaries found in the repo","details":null,"documentation":{"short":"Determines if the project has generated executable (binary) artifacts in the source repository.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#binary-artifacts"}},{"name":"Code-Review","score":7,"reason":"Found 8/11 approved changesets -- score normalized to 7","details":null,"documentation":{"short":"Determines if the project requires human code review before pull requests (aka merge requests) are merged.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#code-review"}},{"name":"Packaging","score":-1,"reason":"packaging workflow not detected","details":["Warn: no GitHub/GitLab publishing workflow detected."],"documentation":{"short":"Determines if the project is published as a package that others can easily download, install, easily update, and uninstall.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#packaging"}},{"name":"Token-Permissions","score":0,"reason":"detected GitHub workflow tokens with excessive permissions","details":["Warn: jobLevel 'contents' permission set to 'write': .github/workflows/release.yml:118","Warn: no topLevel permission defined: .github/workflows/ci.yml:1","Warn: no topLevel permission defined: .github/workflows/release.yml:1"],"documentation":{"short":"Determines if the project's workflows follow the principle of least privilege.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#token-permissions"}},{"name":"CII-Best-Practices","score":0,"reason":"no effort to earn an OpenSSF best practices badge detected","details":null,"documentation":{"short":"Determines if the project has an OpenSSF (formerly CII) Best Practices Badge.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#cii-best-practices"}},{"name":"Security-Policy","score":0,"reason":"security policy file not detected","details":["Warn: no security policy file detected","Warn: no security file to analyze","Warn: no security file to analyze","Warn: no security file to analyze"],"documentation":{"short":"Determines if the project has published a security policy.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#security-policy"}},{"name":"Fuzzing","score":0,"reason":"project is not fuzzed","details":["Warn: no fuzzer integrations found"],"documentation":{"short":"Determines if the project uses fuzzing.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#fuzzing"}},{"name":"License","score":10,"reason":"license file detected","details":["Info: project has a license file: LICENSE.txt:0","Info: FSF or OSI recognized license: MIT License: LICENSE.txt:0"],"documentation":{"short":"Determines if the project has defined a license.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#license"}},{"name":"Pinned-Dependencies","score":0,"reason":"dependency not pinned by hash detected -- score normalized to 0","details":["Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/ci.yml:70: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/ci.yml/master?enable=pin","Warn: third-party GitHubAction not pinned by hash: .github/workflows/ci.yml:72: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/ci.yml/master?enable=pin","Warn: third-party GitHubAction not pinned by hash: .github/workflows/ci.yml:78: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/ci.yml/master?enable=pin","Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/ci.yml:87: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/ci.yml/master?enable=pin","Warn: third-party GitHubAction not pinned by hash: .github/workflows/ci.yml:89: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/ci.yml/master?enable=pin","Warn: third-party GitHubAction not pinned by hash: .github/workflows/ci.yml:95: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/ci.yml/master?enable=pin","Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/ci.yml:13: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/ci.yml/master?enable=pin","Warn: third-party GitHubAction not pinned by hash: .github/workflows/ci.yml:15: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/ci.yml/master?enable=pin","Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/ci.yml:52: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/ci.yml/master?enable=pin","Warn: third-party GitHubAction not pinned by hash: .github/workflows/ci.yml:54: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/ci.yml/master?enable=pin","Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/release.yml:32: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/release.yml/master?enable=pin","Warn: third-party GitHubAction not pinned by hash: .github/workflows/release.yml:34: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/release.yml/master?enable=pin","Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/release.yml:41: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/release.yml/master?enable=pin","Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/release.yml:60: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/release.yml/master?enable=pin","Warn: third-party GitHubAction not pinned by hash: .github/workflows/release.yml:62: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/release.yml/master?enable=pin","Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/release.yml:69: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/release.yml/master?enable=pin","Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/release.yml:77: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/release.yml/master?enable=pin","Warn: third-party GitHubAction not pinned by hash: .github/workflows/release.yml:79: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/release.yml/master?enable=pin","Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/release.yml:84: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/release.yml/master?enable=pin","Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/release.yml:96: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/release.yml/master?enable=pin","Warn: third-party GitHubAction not pinned by hash: .github/workflows/release.yml:102: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/release.yml/master?enable=pin","Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/release.yml:122: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/release.yml/master?enable=pin","Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/release.yml:124: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/release.yml/master?enable=pin","Warn: third-party GitHubAction not pinned by hash: .github/workflows/release.yml:130: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/release.yml/master?enable=pin","Warn: containerImage not pinned by hash: Dockerfile:5","Warn: containerImage not pinned by hash: Dockerfile:15: pin your Docker image by updating python:3.7-slim-stretch to python:3.7-slim-stretch@sha256:649b13bc3e6a70f7722d5eba4d78afbf4e9cec63193a29148271124840013286","Warn: pipCommand not pinned by hash: .github/workflows/ci.yml:31","Warn: pipCommand not pinned by hash: .github/workflows/ci.yml:32","Info:   0 out of  13 GitHub-owned GitHubAction dependencies pinned","Info:   0 out of  11 third-party GitHubAction dependencies pinned","Info:   0 out of   2 containerImage dependencies pinned","Info:   0 out of   2 pipCommand dependencies pinned"],"documentation":{"short":"Determines if the project has declared and pinned the dependencies of its build process.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#pinned-dependencies"}},{"name":"Branch-Protection","score":0,"reason":"branch protection not enabled on development/release branches","details":["Warn: branch protection not enabled for branch 'master'"],"documentation":{"short":"Determines if the default and release branches are protected with GitHub's branch protection settings.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#branch-protection"}},{"name":"Signed-Releases","score":0,"reason":"Project has not signed or included provenance with any releases.","details":["Warn: release artifact v0.6.2 not signed: https://api.github.com/repos/onecodex/finch-rs/releases/226021649","Warn: release artifact v0.6.2 does not have provenance: https://api.github.com/repos/onecodex/finch-rs/releases/226021649"],"documentation":{"short":"Determines if the project cryptographically signs release artifacts.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#signed-releases"}},{"name":"SAST","score":0,"reason":"SAST tool is not run on all commits -- score normalized to 0","details":["Warn: 0 commits out of 28 are checked with a SAST tool"],"documentation":{"short":"Determines if the project uses static code analysis.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#sast"}},{"name":"Vulnerabilities","score":0,"reason":"10 existing vulnerabilities detected","details":["Warn: Project is vulnerable to: RUSTSEC-2021-0139","Warn: Project is vulnerable to: RUSTSEC-2021-0145 / GHSA-g98v-hv3f-hcfr","Warn: Project is vulnerable to: RUSTSEC-2024-0375","Warn: Project is vulnerable to: RUSTSEC-2023-0028","Warn: Project is vulnerable to: RUSTSEC-2024-0384","Warn: Project is vulnerable to: RUSTSEC-2020-0077","Warn: Project is vulnerable to: GHSA-pph8-gcv7-4qj5","Warn: Project is vulnerable to: RUSTSEC-2025-0020","Warn: Project is vulnerable to: RUSTSEC-2023-0018 / GHSA-mc8h-8q98-g5hr","Warn: Project is vulnerable to: RUSTSEC-2023-0081"],"documentation":{"short":"Determines if the project has open, known unfixed vulnerabilities.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#vulnerabilities"}}]},"last_synced_at":"2025-08-22T06:53:56.403Z","repository_id":19159697,"created_at":"2025-08-22T06:53:56.403Z","updated_at":"2025-08-22T06:53:56.403Z"},"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":273523663,"owners_count":25120864,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-09-03T02:00:09.631Z","response_time":76,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"},"owner_record":{"login":"onecodex","name":"One Codex","uuid":"7833433","kind":"organization","description":"","email":"hello@onecodex.com","website":null,"location":null,"twitter":null,"company":null,"icon_url":"https://avatars.githubusercontent.com/u/7833433?v=4","repositories_count":60,"last_synced_at":"2024-04-17T18:11:07.659Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/onecodex","funding_links":[],"total_stars":374,"followers":13,"following":0,"created_at":"2022-11-06T01:58:24.442Z","updated_at":"2024-04-17T18:11:17.805Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/onecodex","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/onecodex/repositories"},"tags":[{"name":"v0.6.2","sha":"bb481c04876aef95200547ef4da8622f634a029e","kind":"commit","published_at":"2025-06-17T23:21:23.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/v0.6.2","html_url":"https://github.com/onecodex/finch-rs/releases/tag/v0.6.2","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/onecodex/finch-rs@v0.6.2","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.6.2","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.6.2/manifests"},{"name":"v0.5.0","sha":"a316f29636267266c13b697ec0019b172d7bc719","kind":"commit","published_at":"2022-12-13T12:56:59.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/v0.5.0","html_url":"https://github.com/onecodex/finch-rs/releases/tag/v0.5.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/onecodex/finch-rs@v0.5.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.5.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.5.0/manifests"},{"name":"v0.4.3","sha":"2e51b729c5c821e5a26bf97afbe91711291a867c","kind":"commit","published_at":"2022-09-09T17:36:31.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/v0.4.3","html_url":"https://github.com/onecodex/finch-rs/releases/tag/v0.4.3","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/onecodex/finch-rs@v0.4.3","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.4.3","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.4.3/manifests"},{"name":"v0.4.2","sha":"fb7f18c251de7eb4a32a2ceb922f27ce08d5372b","kind":"commit","published_at":"2022-09-08T19:17:12.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/v0.4.2","html_url":"https://github.com/onecodex/finch-rs/releases/tag/v0.4.2","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/onecodex/finch-rs@v0.4.2","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.4.2","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.4.2/manifests"},{"name":"v0.4.1","sha":"f5f4773d5c0990b6277b6152f97d8d7a3f12385a","kind":"commit","published_at":"2021-07-12T13:19:34.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/v0.4.1","html_url":"https://github.com/onecodex/finch-rs/releases/tag/v0.4.1","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/onecodex/finch-rs@v0.4.1","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.4.1","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.4.1/manifests"},{"name":"v0.3.0","sha":"65fa21c15e0588d991476065a319729a5d6ba0fa","kind":"commit","published_at":"2019-12-04T22:00:52.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/v0.3.0","html_url":"https://github.com/onecodex/finch-rs/releases/tag/v0.3.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/onecodex/finch-rs@v0.3.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.3.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.3.0/manifests"},{"name":"v0.2.0","sha":"94f9cc9fa5528999c28520638e6b5dce17961394","kind":"commit","published_at":"2019-04-09T17:18:28.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/v0.2.0","html_url":"https://github.com/onecodex/finch-rs/releases/tag/v0.2.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/onecodex/finch-rs@v0.2.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.2.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.2.0/manifests"},{"name":"v0.1.9","sha":"462455c1684d6ff01d1da0b4772b102f87c453da","kind":"commit","published_at":"2018-08-27T16:38:00.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/v0.1.9","html_url":"https://github.com/onecodex/finch-rs/releases/tag/v0.1.9","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/onecodex/finch-rs@v0.1.9","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.9","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.9/manifests"},{"name":"v0.1.8","sha":"5cf7945db21a4f7f49f3cfbacbc5081e9e6b39bd","kind":"commit","published_at":"2018-08-24T15:23:03.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/v0.1.8","html_url":"https://github.com/onecodex/finch-rs/releases/tag/v0.1.8","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/onecodex/finch-rs@v0.1.8","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.8","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.8/manifests"},{"name":"v0.1.7","sha":"21ad1b8aadb2eee127848ed5ba66f8e18297c448","kind":"commit","published_at":"2018-08-21T22:43:50.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/v0.1.7","html_url":"https://github.com/onecodex/finch-rs/releases/tag/v0.1.7","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/onecodex/finch-rs@v0.1.7","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.7","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.7/manifests"},{"name":"v0.1.6","sha":"95287397968c198a785023a6c4c838cd96f50b86","kind":"commit","published_at":"2018-06-06T20:38:50.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/v0.1.6","html_url":"https://github.com/onecodex/finch-rs/releases/tag/v0.1.6","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/onecodex/finch-rs@v0.1.6","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.6","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.6/manifests"},{"name":"joss","sha":"3180086e46a718891ad622bf85e270c3b0c2c415","kind":"commit","published_at":"2018-01-30T18:53:03.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/joss","html_url":"https://github.com/onecodex/finch-rs/releases/tag/joss","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/onecodex/finch-rs@joss","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/joss","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/joss/manifests"},{"name":"v0.1.5","sha":"eb41de679091ea4d99d354fb54b9bea59f4ed435","kind":"commit","published_at":"2018-01-16T23:36:53.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/v0.1.5","html_url":"https://github.com/onecodex/finch-rs/releases/tag/v0.1.5","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/onecodex/finch-rs@v0.1.5","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.5","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.5/manifests"},{"name":"v0.1.4","sha":"fd7e52f9ccaccb6162b0a5f4f8f98b55da99472f","kind":"commit","published_at":"2017-10-31T03:56:03.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/v0.1.4","html_url":"https://github.com/onecodex/finch-rs/releases/tag/v0.1.4","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/onecodex/finch-rs@v0.1.4","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.4","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.4/manifests"},{"name":"v0.1.3","sha":"1c61cb27589072123a4bd7d6a7ca8120d186bfbd","kind":"commit","published_at":"2017-09-14T18:32:51.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/v0.1.3","html_url":"https://github.com/onecodex/finch-rs/releases/tag/v0.1.3","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/onecodex/finch-rs@v0.1.3","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.3","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.3/manifests"},{"name":"v0.1.2","sha":"bddb6adb220d68695f7552ea56eff61bfb6299fe","kind":"commit","published_at":"2017-08-24T17:14:42.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/v0.1.2","html_url":"https://github.com/onecodex/finch-rs/releases/tag/v0.1.2","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/onecodex/finch-rs@v0.1.2","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.2","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.2/manifests"},{"name":"v0.1.0","sha":"b6f36b8c0b35e64eaa3a3bba71eb9f4af946ada6","kind":"commit","published_at":"2017-03-28T00:29:28.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/v0.1.0","html_url":"https://github.com/onecodex/finch-rs/releases/tag/v0.1.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/onecodex/finch-rs@v0.1.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.0/manifests"}]},"repo_metadata_updated_at":"2025-09-04T10:14:03.572Z","dependent_packages_count":5,"downloads":64608,"downloads_period":"total","dependent_repos_count":7,"rankings":{"downloads":9.331257402951497,"dependent_repos_count":8.685250055899232,"dependent_packages_count":6.216091337268229,"stargazers_count":14.159423962790143,"forks_count":16.910520627585434,"docker_downloads_count":null,"average":11.060508677298907},"purl":"pkg:cargo/finch","advisories":[],"docker_usage_url":"https://docker.ecosyste.ms/usage/cargo/finch","docker_dependents_count":null,"docker_downloads_count":null,"usage_url":"https://repos.ecosyste.ms/usage/cargo/finch","dependent_repositories_url":"https://repos.ecosyste.ms/api/v1/usage/cargo/finch/dependencies","status":null,"funding_links":[],"critical":null,"issue_metadata":{"last_synced_at":"2025-08-31T21:39:51.176Z","issues_count":39,"pull_requests_count":34,"avg_time_to_close_issue":27783432.884615384,"avg_time_to_close_pull_request":1052428.0625,"issues_closed_count":26,"pull_requests_closed_count":32,"pull_request_authors_count":13,"issue_authors_count":13,"avg_comments_per_issue":1.7179487179487178,"avg_comments_per_pull_request":0.5882352941176471,"merged_pull_requests_count":27,"bot_issues_count":0,"bot_pull_requests_count":2,"past_year_issues_count":0,"past_year_pull_requests_count":3,"past_year_avg_time_to_close_issue":null,"past_year_avg_time_to_close_pull_request":54183.333333333336,"past_year_issues_closed_count":0,"past_year_pull_requests_closed_count":3,"past_year_pull_request_authors_count":1,"past_year_issue_authors_count":0,"past_year_avg_comments_per_issue":null,"past_year_avg_comments_per_pull_request":0.3333333333333333,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":1,"issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/issues","maintainers":[],"active_maintainers":[]},"versions_url":"https://packages.ecosyste.ms/api/v1/registries/crates.io/packages/finch/versions","version_numbers_url":"https://packages.ecosyste.ms/api/v1/registries/crates.io/packages/finch/version_numbers","dependent_packages_url":"https://packages.ecosyste.ms/api/v1/registries/crates.io/packages/finch/dependent_packages","related_packages_url":"https://packages.ecosyste.ms/api/v1/registries/crates.io/packages/finch/related_packages","maintainers":[{"uuid":"2876","login":"Keats","name":"Vincent Prouillet","email":null,"url":"https://github.com/Keats","packages_count":27,"html_url":"https://crates.io/users/Keats","role":null,"created_at":"2022-11-07T19:22:20.059Z","updated_at":"2022-11-07T19:22:20.059Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/crates.io/maintainers/Keats/packages"},{"uuid":"6077","login":"bovee","name":"Roderick Bovee","email":null,"url":"https://github.com/bovee","packages_count":4,"html_url":"https://crates.io/users/bovee","role":null,"created_at":"2022-11-07T19:22:20.071Z","updated_at":"2022-11-07T19:22:20.071Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/crates.io/maintainers/bovee/packages"},{"uuid":"93102","login":"boydgreenfield","name":"Nick Greenfield","email":null,"url":"https://github.com/boydgreenfield","packages_count":5,"html_url":"https://crates.io/users/boydgreenfield","role":null,"created_at":"2022-11-07T19:22:20.077Z","updated_at":"2022-11-07T19:22:20.077Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/crates.io/maintainers/boydgreenfield/packages"},{"uuid":"175682","login":"jairideout","name":"Jai Ram Rideout","email":null,"url":"https://github.com/jairideout","packages_count":6,"html_url":"https://crates.io/users/jairideout","role":null,"created_at":"2022-11-07T19:22:20.090Z","updated_at":"2022-11-07T19:22:20.090Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/crates.io/maintainers/jairideout/packages"},{"uuid":"184179","login":"GSGerritsen","name":"Gerrit Gerritsen","email":null,"url":"https://github.com/GSGerritsen","packages_count":7,"html_url":"https://crates.io/users/GSGerritsen","role":null,"created_at":"2022-11-24T03:59:47.953Z","updated_at":"2022-11-24T03:59:47.953Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/crates.io/maintainers/GSGerritsen/packages"},{"uuid":"297879","login":"audy","name":"Austin Richardson","email":null,"url":"https://github.com/audy","packages_count":5,"html_url":"https://crates.io/users/audy","role":null,"created_at":"2025-06-17T23:33:18.323Z","updated_at":"2025-06-17T23:33:18.323Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/crates.io/maintainers/audy/packages"}],"registry":{"name":"crates.io","url":"https://crates.io","ecosystem":"cargo","default":true,"packages_count":204324,"maintainers_count":50494,"namespaces_count":0,"keywords_count":51682,"github":"rust-lang","metadata":{"funded_packages_count":19894},"icon_url":"https://github.com/rust-lang.png","created_at":"2022-04-04T15:19:22.689Z","updated_at":"2025-09-04T06:52:42.730Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/crates.io/packages","maintainers_url":"https://packages.ecosyste.ms/api/v1/registries/crates.io/maintainers","namespaces_url":"https://packages.ecosyste.ms/api/v1/registries/crates.io/namespaces"}},{"id":4087977,"name":"finch_cli","ecosystem":"cargo","description":"An implementation of min-wise independent permutation locality sensitive hashing ('MinHashing') for genomic data and command-line utility for manipulation.","homepage":null,"licenses":"MIT","normalized_licenses":["MIT"],"repository_url":"https://github.com/onecodex/finch-rs","keywords_array":["minhash","sketches","bioinformatics"],"namespace":null,"versions_count":3,"first_release_published_at":"2021-01-22T13:03:11.219Z","latest_release_published_at":"2023-02-28T14:23:53.412Z","latest_release_number":"0.5.0","last_synced_at":"2025-09-03T23:11:06.775Z","created_at":"2022-04-12T12:31:42.854Z","updated_at":"2025-09-04T10:14:03.745Z","registry_url":"https://crates.io/crates/finch_cli/","install_command":"cargo install finch_cli","documentation_url":"https://docs.rs/finch_cli/","metadata":{"categories":["science","command-line-utilities"]},"repo_metadata":{"id":19159697,"uuid":"77661950","full_name":"onecodex/finch-rs","owner":"onecodex","description":"A genomic minhashing implementation in Rust","archived":false,"fork":false,"pushed_at":"2025-06-17T23:22:52.000Z","size":388,"stargazers_count":99,"open_issues_count":15,"forks_count":8,"subscribers_count":17,"default_branch":"master","last_synced_at":"2025-08-28T02:32:34.476Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":"https://www.onecodex.com","language":"Rust","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"mit","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/onecodex.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE.txt","code_of_conduct":"CODE_OF_CONDUCT.md","threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null}},"created_at":"2016-12-30T05:09:18.000Z","updated_at":"2025-06-25T13:42:47.000Z","dependencies_parsed_at":"2025-07-15T07:52:07.738Z","dependency_job_id":"937b0223-83e9-4dfc-9127-08a450173a42","html_url":"https://github.com/onecodex/finch-rs","commit_stats":{"total_commits":123,"total_committers":16,"mean_commits":7.6875,"dds":0.4552845528455285,"last_synced_commit":"28e7069b2fb48b8682ddc9803154cae3ba8f2846"},"previous_names":[],"tags_count":17,"template":false,"template_full_name":null,"purl":"pkg:github/onecodex/finch-rs","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/onecodex","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/refs/heads/master","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/sbom","scorecard":{"id":706930,"data":{"date":"2025-08-11","repo":{"name":"github.com/onecodex/finch-rs","commit":"bb481c04876aef95200547ef4da8622f634a029e"},"scorecard":{"version":"v5.2.1-40-gf6ed084d","commit":"f6ed084d17c9236477efd66e5b258b9d4cc7b389"},"score":3.3,"checks":[{"name":"Maintained","score":5,"reason":"6 commit(s) and 0 issue activity found in the last 90 days -- score normalized to 5","details":null,"documentation":{"short":"Determines if the project is \"actively maintained\".","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#maintained"}},{"name":"Dangerous-Workflow","score":10,"reason":"no dangerous workflow patterns detected","details":null,"documentation":{"short":"Determines if the project's GitHub Action workflows avoid dangerous patterns.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#dangerous-workflow"}},{"name":"Binary-Artifacts","score":10,"reason":"no binaries found in the repo","details":null,"documentation":{"short":"Determines if the project has generated executable (binary) artifacts in the source repository.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#binary-artifacts"}},{"name":"Code-Review","score":7,"reason":"Found 8/11 approved changesets -- score normalized to 7","details":null,"documentation":{"short":"Determines if the project requires human code review before pull requests (aka merge requests) are merged.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#code-review"}},{"name":"Packaging","score":-1,"reason":"packaging workflow not detected","details":["Warn: no GitHub/GitLab publishing workflow detected."],"documentation":{"short":"Determines if the project is published as a package that others can easily download, install, easily update, and uninstall.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#packaging"}},{"name":"Token-Permissions","score":0,"reason":"detected GitHub workflow tokens with excessive permissions","details":["Warn: jobLevel 'contents' permission set to 'write': .github/workflows/release.yml:118","Warn: no topLevel permission defined: .github/workflows/ci.yml:1","Warn: no topLevel permission defined: .github/workflows/release.yml:1"],"documentation":{"short":"Determines if the project's workflows follow the principle of least privilege.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#token-permissions"}},{"name":"CII-Best-Practices","score":0,"reason":"no effort to earn an OpenSSF best practices badge detected","details":null,"documentation":{"short":"Determines if the project has an OpenSSF (formerly CII) Best Practices Badge.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#cii-best-practices"}},{"name":"Security-Policy","score":0,"reason":"security policy file not detected","details":["Warn: no security policy file detected","Warn: no security file to analyze","Warn: no security file to analyze","Warn: no security file to analyze"],"documentation":{"short":"Determines if the project has published a security policy.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#security-policy"}},{"name":"Fuzzing","score":0,"reason":"project is not fuzzed","details":["Warn: no fuzzer integrations found"],"documentation":{"short":"Determines if the project uses fuzzing.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#fuzzing"}},{"name":"License","score":10,"reason":"license file detected","details":["Info: project has a license file: LICENSE.txt:0","Info: FSF or OSI recognized license: MIT License: LICENSE.txt:0"],"documentation":{"short":"Determines if the project has defined a license.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#license"}},{"name":"Pinned-Dependencies","score":0,"reason":"dependency not pinned by hash detected -- score normalized to 0","details":["Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/ci.yml:70: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/ci.yml/master?enable=pin","Warn: third-party GitHubAction not pinned by hash: .github/workflows/ci.yml:72: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/ci.yml/master?enable=pin","Warn: third-party GitHubAction not pinned by hash: .github/workflows/ci.yml:78: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/ci.yml/master?enable=pin","Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/ci.yml:87: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/ci.yml/master?enable=pin","Warn: third-party GitHubAction not pinned by hash: .github/workflows/ci.yml:89: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/ci.yml/master?enable=pin","Warn: third-party GitHubAction not pinned by hash: .github/workflows/ci.yml:95: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/ci.yml/master?enable=pin","Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/ci.yml:13: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/ci.yml/master?enable=pin","Warn: third-party GitHubAction not pinned by hash: .github/workflows/ci.yml:15: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/ci.yml/master?enable=pin","Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/ci.yml:52: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/ci.yml/master?enable=pin","Warn: third-party GitHubAction not pinned by hash: .github/workflows/ci.yml:54: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/ci.yml/master?enable=pin","Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/release.yml:32: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/release.yml/master?enable=pin","Warn: third-party GitHubAction not pinned by hash: .github/workflows/release.yml:34: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/release.yml/master?enable=pin","Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/release.yml:41: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/release.yml/master?enable=pin","Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/release.yml:60: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/release.yml/master?enable=pin","Warn: third-party GitHubAction not pinned by hash: .github/workflows/release.yml:62: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/release.yml/master?enable=pin","Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/release.yml:69: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/release.yml/master?enable=pin","Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/release.yml:77: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/release.yml/master?enable=pin","Warn: third-party GitHubAction not pinned by hash: .github/workflows/release.yml:79: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/release.yml/master?enable=pin","Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/release.yml:84: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/release.yml/master?enable=pin","Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/release.yml:96: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/release.yml/master?enable=pin","Warn: third-party GitHubAction not pinned by hash: .github/workflows/release.yml:102: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/release.yml/master?enable=pin","Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/release.yml:122: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/release.yml/master?enable=pin","Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/release.yml:124: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/release.yml/master?enable=pin","Warn: third-party GitHubAction not pinned by hash: .github/workflows/release.yml:130: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/release.yml/master?enable=pin","Warn: containerImage not pinned by hash: Dockerfile:5","Warn: containerImage not pinned by hash: Dockerfile:15: pin your Docker image by updating python:3.7-slim-stretch to python:3.7-slim-stretch@sha256:649b13bc3e6a70f7722d5eba4d78afbf4e9cec63193a29148271124840013286","Warn: pipCommand not pinned by hash: .github/workflows/ci.yml:31","Warn: pipCommand not pinned by hash: .github/workflows/ci.yml:32","Info:   0 out of  13 GitHub-owned GitHubAction dependencies pinned","Info:   0 out of  11 third-party GitHubAction dependencies pinned","Info:   0 out of   2 containerImage dependencies pinned","Info:   0 out of   2 pipCommand dependencies pinned"],"documentation":{"short":"Determines if the project has declared and pinned the dependencies of its build process.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#pinned-dependencies"}},{"name":"Branch-Protection","score":0,"reason":"branch protection not enabled on development/release branches","details":["Warn: branch protection not enabled for branch 'master'"],"documentation":{"short":"Determines if the default and release branches are protected with GitHub's branch protection settings.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#branch-protection"}},{"name":"Signed-Releases","score":0,"reason":"Project has not signed or included provenance with any releases.","details":["Warn: release artifact v0.6.2 not signed: https://api.github.com/repos/onecodex/finch-rs/releases/226021649","Warn: release artifact v0.6.2 does not have provenance: https://api.github.com/repos/onecodex/finch-rs/releases/226021649"],"documentation":{"short":"Determines if the project cryptographically signs release artifacts.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#signed-releases"}},{"name":"SAST","score":0,"reason":"SAST tool is not run on all commits -- score normalized to 0","details":["Warn: 0 commits out of 28 are checked with a SAST tool"],"documentation":{"short":"Determines if the project uses static code analysis.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#sast"}},{"name":"Vulnerabilities","score":0,"reason":"10 existing vulnerabilities detected","details":["Warn: Project is vulnerable to: RUSTSEC-2021-0139","Warn: Project is vulnerable to: RUSTSEC-2021-0145 / GHSA-g98v-hv3f-hcfr","Warn: Project is vulnerable to: RUSTSEC-2024-0375","Warn: Project is vulnerable to: RUSTSEC-2023-0028","Warn: Project is vulnerable to: RUSTSEC-2024-0384","Warn: Project is vulnerable to: RUSTSEC-2020-0077","Warn: Project is vulnerable to: GHSA-pph8-gcv7-4qj5","Warn: Project is vulnerable to: RUSTSEC-2025-0020","Warn: Project is vulnerable to: RUSTSEC-2023-0018 / GHSA-mc8h-8q98-g5hr","Warn: Project is vulnerable to: RUSTSEC-2023-0081"],"documentation":{"short":"Determines if the project has open, known unfixed vulnerabilities.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#vulnerabilities"}}]},"last_synced_at":"2025-08-22T06:53:56.403Z","repository_id":19159697,"created_at":"2025-08-22T06:53:56.403Z","updated_at":"2025-08-22T06:53:56.403Z"},"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":273523663,"owners_count":25120864,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-09-03T02:00:09.631Z","response_time":76,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"},"owner_record":{"login":"onecodex","name":"One Codex","uuid":"7833433","kind":"organization","description":"","email":"hello@onecodex.com","website":null,"location":null,"twitter":null,"company":null,"icon_url":"https://avatars.githubusercontent.com/u/7833433?v=4","repositories_count":60,"last_synced_at":"2024-04-17T18:11:07.659Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/onecodex","funding_links":[],"total_stars":374,"followers":13,"following":0,"created_at":"2022-11-06T01:58:24.442Z","updated_at":"2024-04-17T18:11:17.805Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/onecodex","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/onecodex/repositories"},"tags":[{"name":"v0.6.2","sha":"bb481c04876aef95200547ef4da8622f634a029e","kind":"commit","published_at":"2025-06-17T23:21:23.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/v0.6.2","html_url":"https://github.com/onecodex/finch-rs/releases/tag/v0.6.2","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/onecodex/finch-rs@v0.6.2","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.6.2","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.6.2/manifests"},{"name":"v0.5.0","sha":"a316f29636267266c13b697ec0019b172d7bc719","kind":"commit","published_at":"2022-12-13T12:56:59.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/v0.5.0","html_url":"https://github.com/onecodex/finch-rs/releases/tag/v0.5.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/onecodex/finch-rs@v0.5.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.5.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.5.0/manifests"},{"name":"v0.4.3","sha":"2e51b729c5c821e5a26bf97afbe91711291a867c","kind":"commit","published_at":"2022-09-09T17:36:31.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/v0.4.3","html_url":"https://github.com/onecodex/finch-rs/releases/tag/v0.4.3","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/onecodex/finch-rs@v0.4.3","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.4.3","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.4.3/manifests"},{"name":"v0.4.2","sha":"fb7f18c251de7eb4a32a2ceb922f27ce08d5372b","kind":"commit","published_at":"2022-09-08T19:17:12.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/v0.4.2","html_url":"https://github.com/onecodex/finch-rs/releases/tag/v0.4.2","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/onecodex/finch-rs@v0.4.2","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.4.2","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.4.2/manifests"},{"name":"v0.4.1","sha":"f5f4773d5c0990b6277b6152f97d8d7a3f12385a","kind":"commit","published_at":"2021-07-12T13:19:34.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/v0.4.1","html_url":"https://github.com/onecodex/finch-rs/releases/tag/v0.4.1","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/onecodex/finch-rs@v0.4.1","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.4.1","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.4.1/manifests"},{"name":"v0.3.0","sha":"65fa21c15e0588d991476065a319729a5d6ba0fa","kind":"commit","published_at":"2019-12-04T22:00:52.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/v0.3.0","html_url":"https://github.com/onecodex/finch-rs/releases/tag/v0.3.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/onecodex/finch-rs@v0.3.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.3.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.3.0/manifests"},{"name":"v0.2.0","sha":"94f9cc9fa5528999c28520638e6b5dce17961394","kind":"commit","published_at":"2019-04-09T17:18:28.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/v0.2.0","html_url":"https://github.com/onecodex/finch-rs/releases/tag/v0.2.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/onecodex/finch-rs@v0.2.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.2.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.2.0/manifests"},{"name":"v0.1.9","sha":"462455c1684d6ff01d1da0b4772b102f87c453da","kind":"commit","published_at":"2018-08-27T16:38:00.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/v0.1.9","html_url":"https://github.com/onecodex/finch-rs/releases/tag/v0.1.9","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/onecodex/finch-rs@v0.1.9","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.9","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.9/manifests"},{"name":"v0.1.8","sha":"5cf7945db21a4f7f49f3cfbacbc5081e9e6b39bd","kind":"commit","published_at":"2018-08-24T15:23:03.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/v0.1.8","html_url":"https://github.com/onecodex/finch-rs/releases/tag/v0.1.8","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/onecodex/finch-rs@v0.1.8","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.8","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.8/manifests"},{"name":"v0.1.7","sha":"21ad1b8aadb2eee127848ed5ba66f8e18297c448","kind":"commit","published_at":"2018-08-21T22:43:50.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/v0.1.7","html_url":"https://github.com/onecodex/finch-rs/releases/tag/v0.1.7","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/onecodex/finch-rs@v0.1.7","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.7","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.7/manifests"},{"name":"v0.1.6","sha":"95287397968c198a785023a6c4c838cd96f50b86","kind":"commit","published_at":"2018-06-06T20:38:50.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/v0.1.6","html_url":"https://github.com/onecodex/finch-rs/releases/tag/v0.1.6","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/onecodex/finch-rs@v0.1.6","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.6","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.6/manifests"},{"name":"joss","sha":"3180086e46a718891ad622bf85e270c3b0c2c415","kind":"commit","published_at":"2018-01-30T18:53:03.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/joss","html_url":"https://github.com/onecodex/finch-rs/releases/tag/joss","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/onecodex/finch-rs@joss","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/joss","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/joss/manifests"},{"name":"v0.1.5","sha":"eb41de679091ea4d99d354fb54b9bea59f4ed435","kind":"commit","published_at":"2018-01-16T23:36:53.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/v0.1.5","html_url":"https://github.com/onecodex/finch-rs/releases/tag/v0.1.5","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/onecodex/finch-rs@v0.1.5","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.5","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.5/manifests"},{"name":"v0.1.4","sha":"fd7e52f9ccaccb6162b0a5f4f8f98b55da99472f","kind":"commit","published_at":"2017-10-31T03:56:03.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/v0.1.4","html_url":"https://github.com/onecodex/finch-rs/releases/tag/v0.1.4","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/onecodex/finch-rs@v0.1.4","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.4","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.4/manifests"},{"name":"v0.1.3","sha":"1c61cb27589072123a4bd7d6a7ca8120d186bfbd","kind":"commit","published_at":"2017-09-14T18:32:51.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/v0.1.3","html_url":"https://github.com/onecodex/finch-rs/releases/tag/v0.1.3","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/onecodex/finch-rs@v0.1.3","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.3","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.3/manifests"},{"name":"v0.1.2","sha":"bddb6adb220d68695f7552ea56eff61bfb6299fe","kind":"commit","published_at":"2017-08-24T17:14:42.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/v0.1.2","html_url":"https://github.com/onecodex/finch-rs/releases/tag/v0.1.2","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/onecodex/finch-rs@v0.1.2","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.2","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.2/manifests"},{"name":"v0.1.0","sha":"b6f36b8c0b35e64eaa3a3bba71eb9f4af946ada6","kind":"commit","published_at":"2017-03-28T00:29:28.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/v0.1.0","html_url":"https://github.com/onecodex/finch-rs/releases/tag/v0.1.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/onecodex/finch-rs@v0.1.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.0/manifests"}]},"repo_metadata_updated_at":"2025-09-04T10:14:03.744Z","dependent_packages_count":0,"downloads":3834,"downloads_period":"total","dependent_repos_count":0,"rankings":{"downloads":67.40833738075382,"dependent_repos_count":29.318292202377133,"dependent_packages_count":33.81230354737315,"stargazers_count":13.890747138550077,"forks_count":16.815886660007514,"average":32.249113385812336},"purl":"pkg:cargo/finch_cli","advisories":[],"docker_usage_url":"https://docker.ecosyste.ms/usage/cargo/finch_cli","docker_dependents_count":null,"docker_downloads_count":null,"usage_url":"https://repos.ecosyste.ms/usage/cargo/finch_cli","dependent_repositories_url":"https://repos.ecosyste.ms/api/v1/usage/cargo/finch_cli/dependencies","status":null,"funding_links":[],"critical":null,"issue_metadata":{"last_synced_at":"2025-08-31T21:39:51.176Z","issues_count":39,"pull_requests_count":34,"avg_time_to_close_issue":27783432.884615384,"avg_time_to_close_pull_request":1052428.0625,"issues_closed_count":26,"pull_requests_closed_count":32,"pull_request_authors_count":13,"issue_authors_count":13,"avg_comments_per_issue":1.7179487179487178,"avg_comments_per_pull_request":0.5882352941176471,"merged_pull_requests_count":27,"bot_issues_count":0,"bot_pull_requests_count":2,"past_year_issues_count":0,"past_year_pull_requests_count":3,"past_year_avg_time_to_close_issue":null,"past_year_avg_time_to_close_pull_request":54183.333333333336,"past_year_issues_closed_count":0,"past_year_pull_requests_closed_count":3,"past_year_pull_request_authors_count":1,"past_year_issue_authors_count":0,"past_year_avg_comments_per_issue":null,"past_year_avg_comments_per_pull_request":0.3333333333333333,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":1,"issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/issues","maintainers":[],"active_maintainers":[]},"versions_url":"https://packages.ecosyste.ms/api/v1/registries/crates.io/packages/finch_cli/versions","version_numbers_url":"https://packages.ecosyste.ms/api/v1/registries/crates.io/packages/finch_cli/version_numbers","dependent_packages_url":"https://packages.ecosyste.ms/api/v1/registries/crates.io/packages/finch_cli/dependent_packages","related_packages_url":"https://packages.ecosyste.ms/api/v1/registries/crates.io/packages/finch_cli/related_packages","maintainers":[{"uuid":"2876","login":"Keats","name":"Vincent Prouillet","email":null,"url":"https://github.com/Keats","packages_count":27,"html_url":"https://crates.io/users/Keats","role":null,"created_at":"2022-11-07T19:22:20.508Z","updated_at":"2022-11-07T19:22:20.508Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/crates.io/maintainers/Keats/packages"},{"uuid":"175682","login":"jairideout","name":"Jai Ram Rideout","email":null,"url":"https://github.com/jairideout","packages_count":6,"html_url":"https://crates.io/users/jairideout","role":null,"created_at":"2022-11-07T19:22:20.516Z","updated_at":"2022-11-07T19:22:20.516Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/crates.io/maintainers/jairideout/packages"},{"uuid":"184179","login":"GSGerritsen","name":"Gerrit Gerritsen","email":null,"url":"https://github.com/GSGerritsen","packages_count":7,"html_url":"https://crates.io/users/GSGerritsen","role":null,"created_at":"2022-11-24T03:59:48.078Z","updated_at":"2022-11-24T03:59:48.078Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/crates.io/maintainers/GSGerritsen/packages"}],"registry":{"name":"crates.io","url":"https://crates.io","ecosystem":"cargo","default":true,"packages_count":204324,"maintainers_count":50494,"namespaces_count":0,"keywords_count":51682,"github":"rust-lang","metadata":{"funded_packages_count":19894},"icon_url":"https://github.com/rust-lang.png","created_at":"2022-04-04T15:19:22.689Z","updated_at":"2025-09-04T06:52:42.730Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/crates.io/packages","maintainers_url":"https://packages.ecosyste.ms/api/v1/registries/crates.io/maintainers","namespaces_url":"https://packages.ecosyste.ms/api/v1/registries/crates.io/namespaces"}},{"id":4088042,"name":"finch_lib","ecosystem":"cargo","description":"An implementation of min-wise independent permutation locality sensitive hashing ('MinHashing') for genomic data and command-line utility for manipulation.","homepage":null,"licenses":"MIT","normalized_licenses":["MIT"],"repository_url":"https://github.com/onecodex/finch-rs","keywords_array":["minhash","sketches","bioinformatics"],"namespace":null,"versions_count":1,"first_release_published_at":"2021-01-22T12:32:26.794Z","latest_release_published_at":"2025-09-03T23:11:07.512Z","latest_release_number":null,"last_synced_at":"2025-09-03T23:11:07.512Z","created_at":"2022-04-12T12:31:59.301Z","updated_at":"2025-09-04T10:14:03.823Z","registry_url":"https://crates.io/crates/finch_lib/","install_command":"cargo install finch_lib","documentation_url":"https://docs.rs/finch_lib/","metadata":{"categories":["science"]},"repo_metadata":{"id":19159697,"uuid":"77661950","full_name":"onecodex/finch-rs","owner":"onecodex","description":"A genomic minhashing implementation in Rust","archived":false,"fork":false,"pushed_at":"2025-06-17T23:22:52.000Z","size":388,"stargazers_count":99,"open_issues_count":15,"forks_count":8,"subscribers_count":17,"default_branch":"master","last_synced_at":"2025-08-28T02:32:34.476Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":"https://www.onecodex.com","language":"Rust","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"mit","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/onecodex.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE.txt","code_of_conduct":"CODE_OF_CONDUCT.md","threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null}},"created_at":"2016-12-30T05:09:18.000Z","updated_at":"2025-06-25T13:42:47.000Z","dependencies_parsed_at":"2025-07-15T07:52:07.738Z","dependency_job_id":"937b0223-83e9-4dfc-9127-08a450173a42","html_url":"https://github.com/onecodex/finch-rs","commit_stats":{"total_commits":123,"total_committers":16,"mean_commits":7.6875,"dds":0.4552845528455285,"last_synced_commit":"28e7069b2fb48b8682ddc9803154cae3ba8f2846"},"previous_names":[],"tags_count":17,"template":false,"template_full_name":null,"purl":"pkg:github/onecodex/finch-rs","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/onecodex","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/refs/heads/master","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/sbom","scorecard":{"id":706930,"data":{"date":"2025-08-11","repo":{"name":"github.com/onecodex/finch-rs","commit":"bb481c04876aef95200547ef4da8622f634a029e"},"scorecard":{"version":"v5.2.1-40-gf6ed084d","commit":"f6ed084d17c9236477efd66e5b258b9d4cc7b389"},"score":3.3,"checks":[{"name":"Maintained","score":5,"reason":"6 commit(s) and 0 issue activity found in the last 90 days -- score normalized to 5","details":null,"documentation":{"short":"Determines if the project is \"actively maintained\".","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#maintained"}},{"name":"Dangerous-Workflow","score":10,"reason":"no dangerous workflow patterns detected","details":null,"documentation":{"short":"Determines if the project's GitHub Action workflows avoid dangerous patterns.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#dangerous-workflow"}},{"name":"Binary-Artifacts","score":10,"reason":"no binaries found in the repo","details":null,"documentation":{"short":"Determines if the project has generated executable (binary) artifacts in the source repository.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#binary-artifacts"}},{"name":"Code-Review","score":7,"reason":"Found 8/11 approved changesets -- score normalized to 7","details":null,"documentation":{"short":"Determines if the project requires human code review before pull requests (aka merge requests) are merged.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#code-review"}},{"name":"Packaging","score":-1,"reason":"packaging workflow not detected","details":["Warn: no GitHub/GitLab publishing workflow detected."],"documentation":{"short":"Determines if the project is published as a package that others can easily download, install, easily update, and uninstall.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#packaging"}},{"name":"Token-Permissions","score":0,"reason":"detected GitHub workflow tokens with excessive permissions","details":["Warn: jobLevel 'contents' permission set to 'write': .github/workflows/release.yml:118","Warn: no topLevel permission defined: .github/workflows/ci.yml:1","Warn: no topLevel permission defined: .github/workflows/release.yml:1"],"documentation":{"short":"Determines if the project's workflows follow the principle of least privilege.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#token-permissions"}},{"name":"CII-Best-Practices","score":0,"reason":"no effort to earn an OpenSSF best practices badge detected","details":null,"documentation":{"short":"Determines if the project has an OpenSSF (formerly CII) Best Practices Badge.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#cii-best-practices"}},{"name":"Security-Policy","score":0,"reason":"security policy file not detected","details":["Warn: no security policy file detected","Warn: no security file to analyze","Warn: no security file to analyze","Warn: no security file to analyze"],"documentation":{"short":"Determines if the project has published a security policy.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#security-policy"}},{"name":"Fuzzing","score":0,"reason":"project is not fuzzed","details":["Warn: no fuzzer integrations found"],"documentation":{"short":"Determines if the project uses fuzzing.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#fuzzing"}},{"name":"License","score":10,"reason":"license file detected","details":["Info: project has a license file: LICENSE.txt:0","Info: FSF or OSI recognized license: MIT License: LICENSE.txt:0"],"documentation":{"short":"Determines if the project has defined a license.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#license"}},{"name":"Pinned-Dependencies","score":0,"reason":"dependency not pinned by hash detected -- score normalized to 0","details":["Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/ci.yml:70: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/ci.yml/master?enable=pin","Warn: third-party GitHubAction not pinned by hash: .github/workflows/ci.yml:72: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/ci.yml/master?enable=pin","Warn: third-party GitHubAction not pinned by hash: .github/workflows/ci.yml:78: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/ci.yml/master?enable=pin","Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/ci.yml:87: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/ci.yml/master?enable=pin","Warn: third-party GitHubAction not pinned by hash: .github/workflows/ci.yml:89: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/ci.yml/master?enable=pin","Warn: third-party GitHubAction not pinned by hash: .github/workflows/ci.yml:95: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/ci.yml/master?enable=pin","Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/ci.yml:13: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/ci.yml/master?enable=pin","Warn: third-party GitHubAction not pinned by hash: .github/workflows/ci.yml:15: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/ci.yml/master?enable=pin","Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/ci.yml:52: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/ci.yml/master?enable=pin","Warn: third-party GitHubAction not pinned by hash: .github/workflows/ci.yml:54: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/ci.yml/master?enable=pin","Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/release.yml:32: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/release.yml/master?enable=pin","Warn: third-party GitHubAction not pinned by hash: .github/workflows/release.yml:34: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/release.yml/master?enable=pin","Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/release.yml:41: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/release.yml/master?enable=pin","Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/release.yml:60: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/release.yml/master?enable=pin","Warn: third-party GitHubAction not pinned by hash: .github/workflows/release.yml:62: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/release.yml/master?enable=pin","Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/release.yml:69: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/release.yml/master?enable=pin","Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/release.yml:77: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/release.yml/master?enable=pin","Warn: third-party GitHubAction not pinned by hash: .github/workflows/release.yml:79: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/release.yml/master?enable=pin","Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/release.yml:84: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/release.yml/master?enable=pin","Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/release.yml:96: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/release.yml/master?enable=pin","Warn: third-party GitHubAction not pinned by hash: .github/workflows/release.yml:102: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/release.yml/master?enable=pin","Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/release.yml:122: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/release.yml/master?enable=pin","Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/release.yml:124: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/release.yml/master?enable=pin","Warn: third-party GitHubAction not pinned by hash: .github/workflows/release.yml:130: update your workflow using https://app.stepsecurity.io/secureworkflow/onecodex/finch-rs/release.yml/master?enable=pin","Warn: containerImage not pinned by hash: Dockerfile:5","Warn: containerImage not pinned by hash: Dockerfile:15: pin your Docker image by updating python:3.7-slim-stretch to python:3.7-slim-stretch@sha256:649b13bc3e6a70f7722d5eba4d78afbf4e9cec63193a29148271124840013286","Warn: pipCommand not pinned by hash: .github/workflows/ci.yml:31","Warn: pipCommand not pinned by hash: .github/workflows/ci.yml:32","Info:   0 out of  13 GitHub-owned GitHubAction dependencies pinned","Info:   0 out of  11 third-party GitHubAction dependencies pinned","Info:   0 out of   2 containerImage dependencies pinned","Info:   0 out of   2 pipCommand dependencies pinned"],"documentation":{"short":"Determines if the project has declared and pinned the dependencies of its build process.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#pinned-dependencies"}},{"name":"Branch-Protection","score":0,"reason":"branch protection not enabled on development/release branches","details":["Warn: branch protection not enabled for branch 'master'"],"documentation":{"short":"Determines if the default and release branches are protected with GitHub's branch protection settings.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#branch-protection"}},{"name":"Signed-Releases","score":0,"reason":"Project has not signed or included provenance with any releases.","details":["Warn: release artifact v0.6.2 not signed: https://api.github.com/repos/onecodex/finch-rs/releases/226021649","Warn: release artifact v0.6.2 does not have provenance: https://api.github.com/repos/onecodex/finch-rs/releases/226021649"],"documentation":{"short":"Determines if the project cryptographically signs release artifacts.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#signed-releases"}},{"name":"SAST","score":0,"reason":"SAST tool is not run on all commits -- score normalized to 0","details":["Warn: 0 commits out of 28 are checked with a SAST tool"],"documentation":{"short":"Determines if the project uses static code analysis.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#sast"}},{"name":"Vulnerabilities","score":0,"reason":"10 existing vulnerabilities detected","details":["Warn: Project is vulnerable to: RUSTSEC-2021-0139","Warn: Project is vulnerable to: RUSTSEC-2021-0145 / GHSA-g98v-hv3f-hcfr","Warn: Project is vulnerable to: RUSTSEC-2024-0375","Warn: Project is vulnerable to: RUSTSEC-2023-0028","Warn: Project is vulnerable to: RUSTSEC-2024-0384","Warn: Project is vulnerable to: RUSTSEC-2020-0077","Warn: Project is vulnerable to: GHSA-pph8-gcv7-4qj5","Warn: Project is vulnerable to: RUSTSEC-2025-0020","Warn: Project is vulnerable to: RUSTSEC-2023-0018 / GHSA-mc8h-8q98-g5hr","Warn: Project is vulnerable to: RUSTSEC-2023-0081"],"documentation":{"short":"Determines if the project has open, known unfixed vulnerabilities.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#vulnerabilities"}}]},"last_synced_at":"2025-08-22T06:53:56.403Z","repository_id":19159697,"created_at":"2025-08-22T06:53:56.403Z","updated_at":"2025-08-22T06:53:56.403Z"},"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":273523663,"owners_count":25120864,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-09-03T02:00:09.631Z","response_time":76,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"},"owner_record":{"login":"onecodex","name":"One Codex","uuid":"7833433","kind":"organization","description":"","email":"hello@onecodex.com","website":null,"location":null,"twitter":null,"company":null,"icon_url":"https://avatars.githubusercontent.com/u/7833433?v=4","repositories_count":60,"last_synced_at":"2024-04-17T18:11:07.659Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/onecodex","funding_links":[],"total_stars":374,"followers":13,"following":0,"created_at":"2022-11-06T01:58:24.442Z","updated_at":"2024-04-17T18:11:17.805Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/onecodex","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/onecodex/repositories"},"tags":[{"name":"v0.6.2","sha":"bb481c04876aef95200547ef4da8622f634a029e","kind":"commit","published_at":"2025-06-17T23:21:23.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/v0.6.2","html_url":"https://github.com/onecodex/finch-rs/releases/tag/v0.6.2","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/onecodex/finch-rs@v0.6.2","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.6.2","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.6.2/manifests"},{"name":"v0.5.0","sha":"a316f29636267266c13b697ec0019b172d7bc719","kind":"commit","published_at":"2022-12-13T12:56:59.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/v0.5.0","html_url":"https://github.com/onecodex/finch-rs/releases/tag/v0.5.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/onecodex/finch-rs@v0.5.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.5.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.5.0/manifests"},{"name":"v0.4.3","sha":"2e51b729c5c821e5a26bf97afbe91711291a867c","kind":"commit","published_at":"2022-09-09T17:36:31.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/v0.4.3","html_url":"https://github.com/onecodex/finch-rs/releases/tag/v0.4.3","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/onecodex/finch-rs@v0.4.3","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.4.3","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.4.3/manifests"},{"name":"v0.4.2","sha":"fb7f18c251de7eb4a32a2ceb922f27ce08d5372b","kind":"commit","published_at":"2022-09-08T19:17:12.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/v0.4.2","html_url":"https://github.com/onecodex/finch-rs/releases/tag/v0.4.2","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/onecodex/finch-rs@v0.4.2","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.4.2","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.4.2/manifests"},{"name":"v0.4.1","sha":"f5f4773d5c0990b6277b6152f97d8d7a3f12385a","kind":"commit","published_at":"2021-07-12T13:19:34.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/v0.4.1","html_url":"https://github.com/onecodex/finch-rs/releases/tag/v0.4.1","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/onecodex/finch-rs@v0.4.1","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.4.1","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.4.1/manifests"},{"name":"v0.3.0","sha":"65fa21c15e0588d991476065a319729a5d6ba0fa","kind":"commit","published_at":"2019-12-04T22:00:52.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/v0.3.0","html_url":"https://github.com/onecodex/finch-rs/releases/tag/v0.3.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/onecodex/finch-rs@v0.3.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.3.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.3.0/manifests"},{"name":"v0.2.0","sha":"94f9cc9fa5528999c28520638e6b5dce17961394","kind":"commit","published_at":"2019-04-09T17:18:28.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/v0.2.0","html_url":"https://github.com/onecodex/finch-rs/releases/tag/v0.2.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/onecodex/finch-rs@v0.2.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.2.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.2.0/manifests"},{"name":"v0.1.9","sha":"462455c1684d6ff01d1da0b4772b102f87c453da","kind":"commit","published_at":"2018-08-27T16:38:00.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/v0.1.9","html_url":"https://github.com/onecodex/finch-rs/releases/tag/v0.1.9","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/onecodex/finch-rs@v0.1.9","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.9","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.9/manifests"},{"name":"v0.1.8","sha":"5cf7945db21a4f7f49f3cfbacbc5081e9e6b39bd","kind":"commit","published_at":"2018-08-24T15:23:03.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/v0.1.8","html_url":"https://github.com/onecodex/finch-rs/releases/tag/v0.1.8","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/onecodex/finch-rs@v0.1.8","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.8","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.8/manifests"},{"name":"v0.1.7","sha":"21ad1b8aadb2eee127848ed5ba66f8e18297c448","kind":"commit","published_at":"2018-08-21T22:43:50.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/v0.1.7","html_url":"https://github.com/onecodex/finch-rs/releases/tag/v0.1.7","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/onecodex/finch-rs@v0.1.7","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.7","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.7/manifests"},{"name":"v0.1.6","sha":"95287397968c198a785023a6c4c838cd96f50b86","kind":"commit","published_at":"2018-06-06T20:38:50.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/v0.1.6","html_url":"https://github.com/onecodex/finch-rs/releases/tag/v0.1.6","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/onecodex/finch-rs@v0.1.6","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.6","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.6/manifests"},{"name":"joss","sha":"3180086e46a718891ad622bf85e270c3b0c2c415","kind":"commit","published_at":"2018-01-30T18:53:03.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/joss","html_url":"https://github.com/onecodex/finch-rs/releases/tag/joss","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/onecodex/finch-rs@joss","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/joss","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/joss/manifests"},{"name":"v0.1.5","sha":"eb41de679091ea4d99d354fb54b9bea59f4ed435","kind":"commit","published_at":"2018-01-16T23:36:53.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/v0.1.5","html_url":"https://github.com/onecodex/finch-rs/releases/tag/v0.1.5","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/onecodex/finch-rs@v0.1.5","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.5","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.5/manifests"},{"name":"v0.1.4","sha":"fd7e52f9ccaccb6162b0a5f4f8f98b55da99472f","kind":"commit","published_at":"2017-10-31T03:56:03.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/v0.1.4","html_url":"https://github.com/onecodex/finch-rs/releases/tag/v0.1.4","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/onecodex/finch-rs@v0.1.4","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.4","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.4/manifests"},{"name":"v0.1.3","sha":"1c61cb27589072123a4bd7d6a7ca8120d186bfbd","kind":"commit","published_at":"2017-09-14T18:32:51.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/v0.1.3","html_url":"https://github.com/onecodex/finch-rs/releases/tag/v0.1.3","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/onecodex/finch-rs@v0.1.3","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.3","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.3/manifests"},{"name":"v0.1.2","sha":"bddb6adb220d68695f7552ea56eff61bfb6299fe","kind":"commit","published_at":"2017-08-24T17:14:42.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/v0.1.2","html_url":"https://github.com/onecodex/finch-rs/releases/tag/v0.1.2","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/onecodex/finch-rs@v0.1.2","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.2","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.2/manifests"},{"name":"v0.1.0","sha":"b6f36b8c0b35e64eaa3a3bba71eb9f4af946ada6","kind":"commit","published_at":"2017-03-28T00:29:28.000Z","download_url":"https://codeload.github.com/onecodex/finch-rs/tar.gz/v0.1.0","html_url":"https://github.com/onecodex/finch-rs/releases/tag/v0.1.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/onecodex/finch-rs@v0.1.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/tags/v0.1.0/manifests"}]},"repo_metadata_updated_at":"2025-09-04T10:14:03.822Z","dependent_packages_count":1,"downloads":1226,"downloads_period":"total","dependent_repos_count":0,"rankings":{"downloads":85.1626146641863,"dependent_repos_count":29.318292202377133,"dependent_packages_count":16.95609541526534,"stargazers_count":13.819268165281379,"forks_count":16.815886660007514,"average":32.41443142142354},"purl":"pkg:cargo/finch_lib","advisories":[],"docker_usage_url":"https://docker.ecosyste.ms/usage/cargo/finch_lib","docker_dependents_count":null,"docker_downloads_count":null,"usage_url":"https://repos.ecosyste.ms/usage/cargo/finch_lib","dependent_repositories_url":"https://repos.ecosyste.ms/api/v1/usage/cargo/finch_lib/dependencies","status":null,"funding_links":[],"critical":null,"issue_metadata":{"last_synced_at":"2025-08-31T21:39:51.176Z","issues_count":39,"pull_requests_count":34,"avg_time_to_close_issue":27783432.884615384,"avg_time_to_close_pull_request":1052428.0625,"issues_closed_count":26,"pull_requests_closed_count":32,"pull_request_authors_count":13,"issue_authors_count":13,"avg_comments_per_issue":1.7179487179487178,"avg_comments_per_pull_request":0.5882352941176471,"merged_pull_requests_count":27,"bot_issues_count":0,"bot_pull_requests_count":2,"past_year_issues_count":0,"past_year_pull_requests_count":3,"past_year_avg_time_to_close_issue":null,"past_year_avg_time_to_close_pull_request":54183.333333333336,"past_year_issues_closed_count":0,"past_year_pull_requests_closed_count":3,"past_year_pull_request_authors_count":1,"past_year_issue_authors_count":0,"past_year_avg_comments_per_issue":null,"past_year_avg_comments_per_pull_request":0.3333333333333333,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":1,"issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/issues","maintainers":[],"active_maintainers":[]},"versions_url":"https://packages.ecosyste.ms/api/v1/registries/crates.io/packages/finch_lib/versions","version_numbers_url":"https://packages.ecosyste.ms/api/v1/registries/crates.io/packages/finch_lib/version_numbers","dependent_packages_url":"https://packages.ecosyste.ms/api/v1/registries/crates.io/packages/finch_lib/dependent_packages","related_packages_url":"https://packages.ecosyste.ms/api/v1/registries/crates.io/packages/finch_lib/related_packages","maintainers":[{"uuid":"2876","login":"Keats","name":"Vincent Prouillet","email":null,"url":"https://github.com/Keats","packages_count":27,"html_url":"https://crates.io/users/Keats","role":null,"created_at":"2022-11-07T19:22:26.026Z","updated_at":"2022-11-07T19:22:26.026Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/crates.io/maintainers/Keats/packages"}],"registry":{"name":"crates.io","url":"https://crates.io","ecosystem":"cargo","default":true,"packages_count":204324,"maintainers_count":50494,"namespaces_count":0,"keywords_count":51682,"github":"rust-lang","metadata":{"funded_packages_count":19894},"icon_url":"https://github.com/rust-lang.png","created_at":"2022-04-04T15:19:22.689Z","updated_at":"2025-09-04T06:52:42.730Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/crates.io/packages","maintainers_url":"https://packages.ecosyste.ms/api/v1/registries/crates.io/maintainers","namespaces_url":"https://packages.ecosyste.ms/api/v1/registries/crates.io/namespaces"}}],"commits":{"id":579167,"full_name":"onecodex/finch-rs","default_branch":"master","committers":[{"name":"Roderick Bovee","email":"roderick@onecodex.com","login":null,"count":67},{"name":"Vincent Prouillet","email":"balthek@gmail.com","login":"Keats","count":26},{"name":"Austin Richardson","email":"accounts@agdr.org","login":"audy","count":14},{"name":"Nick Greenfield","email":"boyd.greenfield@gmail.com","login":"boydgreenfield","count":6},{"name":"Roderick Bovee","email":"rbovee@gmail.com","login":"bovee","count":6},{"name":"Jai Ram Rideout","email":"jai.rideout@invitae.com","login":"jairideout","count":6},{"name":"polyatail","email":"andrewscz@gmail.com","login":"polyatail","count":3},{"name":"Max Blachman","email":"blachmanmax@gmail.com","login":"maxbla","count":2},{"name":"Luiz Irber","email":"luiz@onecodex.com","login":null,"count":2},{"name":"David Tolnay","email":"dtolnay@gmail.com","login":"dtolnay","count":1},{"name":"Eh2406","email":"YeomanYaacov@gmail.com","login":"Eh2406","count":1},{"name":"Giovanni Rosa","email":"grosa23@yahoo.com","login":"grosa1","count":1},{"name":"Luiz Irber","email":"luizirber","login":"luizirber","count":1},{"name":"dependabot[bot]","email":"49699333+dependabot[bot]","login":"dependabot[bot]","count":1}],"total_commits":137,"total_committers":14,"total_bot_commits":1,"total_bot_committers":1,"mean_commits":9.785714285714286,"dds":0.5109489051094891,"past_year_committers":[{"name":"Austin Richardson","email":"accounts@agdr.org","login":"audy","count":5}],"past_year_total_commits":5,"past_year_total_committers":1,"past_year_total_bot_commits":0,"past_year_total_bot_committers":0,"past_year_mean_commits":5.0,"past_year_dds":0.0,"last_synced_at":"2025-08-07T08:19:28.622Z","last_synced_commit":"bb481c04876aef95200547ef4da8622f634a029e","created_at":"2023-03-09T05:46:33.082Z","updated_at":"2025-08-07T08:19:28.654Z","commits_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/commits","host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-08-28T00:00:20.468Z","repositories_count":5479765,"commits_count":853309695,"contributors_count":31095220,"owners_count":906558,"icon_url":"https://github.com/github.png","host_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories"}},"issues_stats":{"full_name":"onecodex/finch-rs","html_url":"https://github.com/onecodex/finch-rs","last_synced_at":"2025-08-31T21:39:51.176Z","status":"error","issues_count":39,"pull_requests_count":34,"avg_time_to_close_issue":27783432.884615384,"avg_time_to_close_pull_request":1052428.0625,"issues_closed_count":26,"pull_requests_closed_count":32,"pull_request_authors_count":13,"issue_authors_count":13,"avg_comments_per_issue":1.7179487179487178,"avg_comments_per_pull_request":0.5882352941176471,"merged_pull_requests_count":27,"bot_issues_count":0,"bot_pull_requests_count":2,"past_year_issues_count":0,"past_year_pull_requests_count":3,"past_year_avg_time_to_close_issue":null,"past_year_avg_time_to_close_pull_request":54183.333333333336,"past_year_issues_closed_count":0,"past_year_pull_requests_closed_count":3,"past_year_pull_request_authors_count":1,"past_year_issue_authors_count":0,"past_year_avg_comments_per_issue":null,"past_year_avg_comments_per_pull_request":0.3333333333333333,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":1,"created_at":"2023-05-12T00:05:41.666Z","updated_at":"2025-09-01T00:45:09.915Z","repository_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs","issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/onecodex%2Ffinch-rs/issues","issue_labels_count":{"discussion":2,"chore":1,"easy":1,"enhancement":1,"design":1,"external":1,"bug":1,"DevOps":1},"pull_request_labels_count":{"dependencies":2},"issue_author_associations_count":{"CONTRIBUTOR":26,"NONE":13},"pull_request_author_associations_count":{"CONTRIBUTOR":37,"NONE":2},"issue_authors":{"bovee":21,"HadrienG":4,"boydgreenfield":2,"jianshu93":2,"maxbla":2,"tseemann":1,"NateBaileyTempus":1,"wwood":1,"boasvdp":1,"audy":1,"DoreenM":1,"hgbrian":1,"dcdanko":1},"pull_request_authors":{"audy":10,"jairideout":6,"Keats":6,"bovee":5,"dependabot[bot]":2,"luizirber":2,"maxbla":2,"donovan-h-parks":1,"dtolnay":1,"fossabot":1,"polyatail":1,"Eh2406":1,"grosa1":1},"host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-01T00:00:07.725Z","repositories_count":9966144,"issues_count":29680459,"pull_requests_count":86440165,"authors_count":9648275,"icon_url":"https://github.com/github.png","host_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories","owners_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/owners","authors_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors"},"past_year_issue_labels_count":{},"past_year_pull_request_labels_count":{},"past_year_issue_author_associations_count":{},"past_year_pull_request_author_associations_count":{"CONTRIBUTOR":6},"past_year_issue_authors":{},"past_year_pull_request_authors":{"audy":6},"maintainers":[],"active_maintainers":[]},"events":{"total":{"IssuesEvent":1,"WatchEvent":6,"IssueCommentEvent":1,"PushEvent":1,"PullRequestReviewCommentEvent":2,"PullRequestReviewEvent":2,"PullRequestEvent":6,"ForkEvent":1,"CreateEvent":1},"last_year":{"IssuesEvent":1,"WatchEvent":6,"IssueCommentEvent":1,"PushEvent":1,"PullRequestReviewCommentEvent":2,"PullRequestReviewEvent":2,"PullRequestEvent":6,"ForkEvent":1,"CreateEvent":1}},"keywords":[],"dependencies":[{"ecosystem":"cargo","filepath":"Cargo.lock","sha":null,"kind":"lockfile","created_at":"2022-07-24T20:32:00.329Z","updated_at":"2022-07-24T20:32:00.329Z","repository_link":"https://github.com/onecodex/finch-rs/blob/master/Cargo.lock","dependencies":[{"id":379176592,"package_name":"adler","ecosystem":"cargo","requirements":"0.2.3","direct":false,"kind":"runtime","optional":false},{"id":379176593,"package_name":"aho-corasick","ecosystem":"cargo","requirements":"0.7.15","direct":false,"kind":"runtime","optional":false},{"id":379176594,"package_name":"ansi_term","ecosystem":"cargo","requirements":"0.11.0","direct":false,"kind":"runtime","optional":false},{"id":379176595,"package_name":"anyhow","ecosystem":"cargo","requirements":"1.0.38","direct":false,"kind":"runtime","optional":false},{"id":379176596,"package_name":"assert_cmd","ecosystem":"cargo","requirements":"1.0.2","direct":false,"kind":"runtime","optional":false},{"id":379176597,"package_name":"atty","ecosystem":"cargo","requirements":"0.2.14","direct":false,"kind":"runtime","optional":false},{"id":379176598,"package_name":"autocfg","ecosystem":"cargo","requirements":"1.0.1","direct":false,"kind":"runtime","optional":false},{"id":379176599,"package_name":"bincode","ecosystem":"cargo","requirements":"1.3.1","direct":false,"kind":"runtime","optional":false},{"id":379176600,"package_name":"bit-set","ecosystem":"cargo","requirements":"0.5.2","direct":false,"kind":"runtime","optional":false},{"id":379176601,"package_name":"bit-vec","ecosystem":"cargo","requirements":"0.6.3","direct":false,"kind":"runtime","optional":false},{"id":379176602,"package_name":"bitflags","ecosystem":"cargo","requirements":"1.2.1","direct":false,"kind":"runtime","optional":false},{"id":379176603,"package_name":"buf_redux","ecosystem":"cargo","requirements":"0.8.4","direct":false,"kind":"runtime","optional":false},{"id":379176604,"package_name":"bytecount","ecosystem":"cargo","requirements":"0.6.2","direct":false,"kind":"runtime","optional":false},{"id":379176605,"package_name":"byteorder","ecosystem":"cargo","requirements":"1.4.2","direct":false,"kind":"runtime","optional":false},{"id":379176606,"package_name":"bzip2","ecosystem":"cargo","requirements":"0.3.3","direct":false,"kind":"runtime","optional":false},{"id":379176607,"package_name":"bzip2-sys","ecosystem":"cargo","requirements":"0.1.9+1.0.8","direct":false,"kind":"runtime","optional":false},{"id":379176608,"package_name":"capnp","ecosystem":"cargo","requirements":"0.14.0","direct":false,"kind":"runtime","optional":false},{"id":379176609,"package_name":"cc","ecosystem":"cargo","requirements":"1.0.66","direct":false,"kind":"runtime","optional":false},{"id":379176610,"package_name":"cfg-if","ecosystem":"cargo","requirements":"0.1.10","direct":false,"kind":"runtime","optional":false},{"id":379176611,"package_name":"cfg-if","ecosystem":"cargo","requirements":"1.0.0","direct":false,"kind":"runtime","optional":false},{"id":379176612,"package_name":"clap","ecosystem":"cargo","requirements":"2.33.3","direct":false,"kind":"runtime","optional":false},{"id":379176613,"package_name":"const_fn","ecosystem":"cargo","requirements":"0.4.5","direct":false,"kind":"runtime","optional":false},{"id":379176614,"package_name":"crc32fast","ecosystem":"cargo","requirements":"1.2.1","direct":false,"kind":"runtime","optional":false},{"id":379176615,"package_name":"crossbeam-channel","ecosystem":"cargo","requirements":"0.5.0","direct":false,"kind":"runtime","optional":false},{"id":379176616,"package_name":"crossbeam-deque","ecosystem":"cargo","requirements":"0.8.0","direct":false,"kind":"runtime","optional":false},{"id":379176617,"package_name":"crossbeam-epoch","ecosystem":"cargo","requirements":"0.9.1","direct":false,"kind":"runtime","optional":false},{"id":379176618,"package_name":"crossbeam-utils","ecosystem":"cargo","requirements":"0.8.1","direct":false,"kind":"runtime","optional":false},{"id":379176619,"package_name":"ctor","ecosystem":"cargo","requirements":"0.1.18","direct":false,"kind":"runtime","optional":false},{"id":379176620,"package_name":"difference","ecosystem":"cargo","requirements":"2.0.0","direct":false,"kind":"runtime","optional":false},{"id":379176621,"package_name":"doc-comment","ecosystem":"cargo","requirements":"0.3.3","direct":false,"kind":"runtime","optional":false},{"id":379176622,"package_name":"either","ecosystem":"cargo","requirements":"1.6.1","direct":false,"kind":"runtime","optional":false},{"id":379176623,"package_name":"flate2","ecosystem":"cargo","requirements":"1.0.19","direct":false,"kind":"runtime","optional":false},{"id":379176624,"package_name":"float-cmp","ecosystem":"cargo","requirements":"0.8.0","direct":false,"kind":"runtime","optional":false},{"id":379176625,"package_name":"fnv","ecosystem":"cargo","requirements":"1.0.7","direct":false,"kind":"runtime","optional":false},{"id":379176626,"package_name":"getrandom","ecosystem":"cargo","requirements":"0.1.16","direct":false,"kind":"runtime","optional":false},{"id":379176627,"package_name":"getrandom","ecosystem":"cargo","requirements":"0.2.2","direct":false,"kind":"runtime","optional":false},{"id":379176628,"package_name":"ghost","ecosystem":"cargo","requirements":"0.1.2","direct":false,"kind":"runtime","optional":false},{"id":379176629,"package_name":"hermit-abi","ecosystem":"cargo","requirements":"0.1.18","direct":false,"kind":"runtime","optional":false},{"id":379176630,"package_name":"indoc","ecosystem":"cargo","requirements":"1.0.3","direct":false,"kind":"runtime","optional":false},{"id":379176631,"package_name":"instant","ecosystem":"cargo","requirements":"0.1.9","direct":false,"kind":"runtime","optional":false},{"id":379176632,"package_name":"inventory","ecosystem":"cargo","requirements":"0.1.10","direct":false,"kind":"runtime","optional":false},{"id":379176633,"package_name":"inventory-impl","ecosystem":"cargo","requirements":"0.1.10","direct":false,"kind":"runtime","optional":false},{"id":379176634,"package_name":"itoa","ecosystem":"cargo","requirements":"0.4.7","direct":false,"kind":"runtime","optional":false},{"id":379176635,"package_name":"lazy_static","ecosystem":"cargo","requirements":"1.4.0","direct":false,"kind":"runtime","optional":false},{"id":379176636,"package_name":"libc","ecosystem":"cargo","requirements":"0.2.82","direct":false,"kind":"runtime","optional":false},{"id":379176637,"package_name":"lock_api","ecosystem":"cargo","requirements":"0.4.2","direct":false,"kind":"runtime","optional":false},{"id":379176638,"package_name":"lzma-sys","ecosystem":"cargo","requirements":"0.1.17","direct":false,"kind":"runtime","optional":false},{"id":379176639,"package_name":"matrixmultiply","ecosystem":"cargo","requirements":"0.2.4","direct":false,"kind":"runtime","optional":false},{"id":379176640,"package_name":"memchr","ecosystem":"cargo","requirements":"2.3.4","direct":false,"kind":"runtime","optional":false},{"id":379176641,"package_name":"memmap","ecosystem":"cargo","requirements":"0.7.0","direct":false,"kind":"runtime","optional":false},{"id":379176642,"package_name":"memoffset","ecosystem":"cargo","requirements":"0.6.1","direct":false,"kind":"runtime","optional":false},{"id":379176643,"package_name":"miniz_oxide","ecosystem":"cargo","requirements":"0.4.3","direct":false,"kind":"runtime","optional":false},{"id":379176644,"package_name":"murmurhash3","ecosystem":"cargo","requirements":"0.0.5","direct":false,"kind":"runtime","optional":false},{"id":379176645,"package_name":"ndarray","ecosystem":"cargo","requirements":"0.14.0","direct":false,"kind":"runtime","optional":false},{"id":379176646,"package_name":"needletail","ecosystem":"cargo","requirements":"0.4.0","direct":false,"kind":"runtime","optional":false},{"id":379176647,"package_name":"normalize-line-endings","ecosystem":"cargo","requirements":"0.3.0","direct":false,"kind":"runtime","optional":false},{"id":379176648,"package_name":"num-complex","ecosystem":"cargo","requirements":"0.3.1","direct":false,"kind":"runtime","optional":false},{"id":379176649,"package_name":"num-integer","ecosystem":"cargo","requirements":"0.1.44","direct":false,"kind":"runtime","optional":false},{"id":379176650,"package_name":"num-traits","ecosystem":"cargo","requirements":"0.2.14","direct":false,"kind":"runtime","optional":false},{"id":379176651,"package_name":"num_cpus","ecosystem":"cargo","requirements":"1.13.0","direct":false,"kind":"runtime","optional":false},{"id":379176652,"package_name":"numpy","ecosystem":"cargo","requirements":"0.13.0","direct":false,"kind":"runtime","optional":false},{"id":379176653,"package_name":"parking_lot","ecosystem":"cargo","requirements":"0.11.1","direct":false,"kind":"runtime","optional":false},{"id":379176654,"package_name":"parking_lot_core","ecosystem":"cargo","requirements":"0.8.2","direct":false,"kind":"runtime","optional":false},{"id":379176655,"package_name":"paste","ecosystem":"cargo","requirements":"1.0.4","direct":false,"kind":"runtime","optional":false},{"id":379176656,"package_name":"pkg-config","ecosystem":"cargo","requirements":"0.3.19","direct":false,"kind":"runtime","optional":false},{"id":379176657,"package_name":"ppv-lite86","ecosystem":"cargo","requirements":"0.2.10","direct":false,"kind":"runtime","optional":false},{"id":379176658,"package_name":"predicates","ecosystem":"cargo","requirements":"1.0.6","direct":false,"kind":"runtime","optional":false},{"id":379176659,"package_name":"predicates-core","ecosystem":"cargo","requirements":"1.0.1","direct":false,"kind":"runtime","optional":false},{"id":379176660,"package_name":"predicates-tree","ecosystem":"cargo","requirements":"1.0.1","direct":false,"kind":"runtime","optional":false},{"id":379176661,"package_name":"proc-macro2","ecosystem":"cargo","requirements":"1.0.24","direct":false,"kind":"runtime","optional":false},{"id":379176662,"package_name":"proptest","ecosystem":"cargo","requirements":"0.10.1","direct":false,"kind":"runtime","optional":false},{"id":379176663,"package_name":"pyo3","ecosystem":"cargo","requirements":"0.13.1","direct":false,"kind":"runtime","optional":false},{"id":379176664,"package_name":"pyo3-macros","ecosystem":"cargo","requirements":"0.13.1","direct":false,"kind":"runtime","optional":false},{"id":379176665,"package_name":"pyo3-macros-backend","ecosystem":"cargo","requirements":"0.13.1","direct":false,"kind":"runtime","optional":false},{"id":379176666,"package_name":"quick-error","ecosystem":"cargo","requirements":"1.2.3","direct":false,"kind":"runtime","optional":false},{"id":379176667,"package_name":"quote","ecosystem":"cargo","requirements":"1.0.8","direct":false,"kind":"runtime","optional":false},{"id":379176668,"package_name":"rand","ecosystem":"cargo","requirements":"0.7.3","direct":false,"kind":"runtime","optional":false},{"id":379176669,"package_name":"rand","ecosystem":"cargo","requirements":"0.8.2","direct":false,"kind":"runtime","optional":false},{"id":379176670,"package_name":"rand_chacha","ecosystem":"cargo","requirements":"0.2.2","direct":false,"kind":"runtime","optional":false},{"id":379176671,"package_name":"rand_chacha","ecosystem":"cargo","requirements":"0.3.0","direct":false,"kind":"runtime","optional":false},{"id":379176672,"package_name":"rand_core","ecosystem":"cargo","requirements":"0.5.1","direct":false,"kind":"runtime","optional":false},{"id":379176673,"package_name":"rand_core","ecosystem":"cargo","requirements":"0.6.1","direct":false,"kind":"runtime","optional":false},{"id":379176674,"package_name":"rand_hc","ecosystem":"cargo","requirements":"0.2.0","direct":false,"kind":"runtime","optional":false},{"id":379176675,"package_name":"rand_hc","ecosystem":"cargo","requirements":"0.3.0","direct":false,"kind":"runtime","optional":false},{"id":379176676,"package_name":"rand_xorshift","ecosystem":"cargo","requirements":"0.2.0","direct":false,"kind":"runtime","optional":false},{"id":379176677,"package_name":"rawpointer","ecosystem":"cargo","requirements":"0.2.1","direct":false,"kind":"runtime","optional":false},{"id":379176678,"package_name":"rayon","ecosystem":"cargo","requirements":"1.5.0","direct":false,"kind":"runtime","optional":false},{"id":379176679,"package_name":"rayon-core","ecosystem":"cargo","requirements":"1.9.0","direct":false,"kind":"runtime","optional":false},{"id":379176680,"package_name":"redox_syscall","ecosystem":"cargo","requirements":"0.1.57","direct":false,"kind":"runtime","optional":false},{"id":379176681,"package_name":"redox_syscall","ecosystem":"cargo","requirements":"0.2.4","direct":false,"kind":"runtime","optional":false},{"id":379176682,"package_name":"regex","ecosystem":"cargo","requirements":"1.4.3","direct":false,"kind":"runtime","optional":false},{"id":379176683,"package_name":"regex-syntax","ecosystem":"cargo","requirements":"0.6.22","direct":false,"kind":"runtime","optional":false},{"id":379176684,"package_name":"remove_dir_all","ecosystem":"cargo","requirements":"0.5.3","direct":false,"kind":"runtime","optional":false},{"id":379176685,"package_name":"rusty-fork","ecosystem":"cargo","requirements":"0.3.0","direct":false,"kind":"runtime","optional":false},{"id":379176686,"package_name":"ryu","ecosystem":"cargo","requirements":"1.0.5","direct":false,"kind":"runtime","optional":false},{"id":379176687,"package_name":"safemem","ecosystem":"cargo","requirements":"0.3.3","direct":false,"kind":"runtime","optional":false},{"id":379176688,"package_name":"scopeguard","ecosystem":"cargo","requirements":"1.1.0","direct":false,"kind":"runtime","optional":false},{"id":379176689,"package_name":"serde","ecosystem":"cargo","requirements":"1.0.120","direct":false,"kind":"runtime","optional":false},{"id":379176690,"package_name":"serde_derive","ecosystem":"cargo","requirements":"1.0.120","direct":false,"kind":"runtime","optional":false},{"id":379176691,"package_name":"serde_json","ecosystem":"cargo","requirements":"1.0.61","direct":false,"kind":"runtime","optional":false},{"id":379176692,"package_name":"smallvec","ecosystem":"cargo","requirements":"1.6.1","direct":false,"kind":"runtime","optional":false},{"id":379176693,"package_name":"strsim","ecosystem":"cargo","requirements":"0.8.0","direct":false,"kind":"runtime","optional":false},{"id":379176694,"package_name":"syn","ecosystem":"cargo","requirements":"1.0.58","direct":false,"kind":"runtime","optional":false},{"id":379176695,"package_name":"tempfile","ecosystem":"cargo","requirements":"3.2.0","direct":false,"kind":"runtime","optional":false},{"id":379176696,"package_name":"textwrap","ecosystem":"cargo","requirements":"0.11.0","direct":false,"kind":"runtime","optional":false},{"id":379176697,"package_name":"thiserror","ecosystem":"cargo","requirements":"1.0.23","direct":false,"kind":"runtime","optional":false},{"id":379176698,"package_name":"thiserror-impl","ecosystem":"cargo","requirements":"1.0.23","direct":false,"kind":"runtime","optional":false},{"id":379176699,"package_name":"thread_local","ecosystem":"cargo","requirements":"1.1.0","direct":false,"kind":"runtime","optional":false},{"id":379176700,"package_name":"treeline","ecosystem":"cargo","requirements":"0.1.0","direct":false,"kind":"runtime","optional":false},{"id":379176701,"package_name":"unicode-width","ecosystem":"cargo","requirements":"0.1.8","direct":false,"kind":"runtime","optional":false},{"id":379176702,"package_name":"unicode-xid","ecosystem":"cargo","requirements":"0.2.1","direct":false,"kind":"runtime","optional":false},{"id":379176703,"package_name":"unindent","ecosystem":"cargo","requirements":"0.1.7","direct":false,"kind":"runtime","optional":false},{"id":379176704,"package_name":"vec_map","ecosystem":"cargo","requirements":"0.8.2","direct":false,"kind":"runtime","optional":false},{"id":379176705,"package_name":"wait-timeout","ecosystem":"cargo","requirements":"0.2.0","direct":false,"kind":"runtime","optional":false},{"id":379176706,"package_name":"wasi","ecosystem":"cargo","requirements":"0.9.0+wasi-snapshot-preview1","direct":false,"kind":"runtime","optional":false},{"id":379176707,"package_name":"wasi","ecosystem":"cargo","requirements":"0.10.1+wasi-snapshot-preview1","direct":false,"kind":"runtime","optional":false},{"id":379176708,"package_name":"winapi","ecosystem":"cargo","requirements":"0.3.9","direct":false,"kind":"runtime","optional":false},{"id":379176709,"package_name":"winapi-i686-pc-windows-gnu","ecosystem":"cargo","requirements":"0.4.0","direct":false,"kind":"runtime","optional":false},{"id":379176710,"package_name":"winapi-x86_64-pc-windows-gnu","ecosystem":"cargo","requirements":"0.4.0","direct":false,"kind":"runtime","optional":false},{"id":379176711,"package_name":"xz2","ecosystem":"cargo","requirements":"0.1.6","direct":false,"kind":"runtime","optional":false}]},{"ecosystem":"cargo","filepath":"cli/Cargo.toml","sha":null,"kind":"manifest","created_at":"2022-07-24T20:32:00.421Z","updated_at":"2022-07-24T20:32:00.421Z","repository_link":"https://github.com/onecodex/finch-rs/blob/master/cli/Cargo.toml","dependencies":[{"id":379176970,"package_name":"clap","ecosystem":"cargo","requirements":"2.33.0","direct":true,"kind":"runtime","optional":false},{"id":379176971,"package_name":"finch","ecosystem":"cargo","requirements":"0.4","direct":true,"kind":"runtime","optional":false},{"id":379176972,"package_name":"serde_json","ecosystem":"cargo","requirements":"1","direct":true,"kind":"runtime","optional":false},{"id":379176973,"package_name":"anyhow","ecosystem":"cargo","requirements":"1","direct":true,"kind":"runtime","optional":false},{"id":379176974,"package_name":"assert_cmd","ecosystem":"cargo","requirements":"1","direct":true,"kind":"development","optional":false},{"id":379176975,"package_name":"predicates","ecosystem":"cargo","requirements":"1","direct":true,"kind":"development","optional":false},{"id":379176976,"package_name":"proptest","ecosystem":"cargo","requirements":"0.10","direct":true,"kind":"development","optional":false}]},{"ecosystem":"cargo","filepath":"lib/Cargo.toml","sha":null,"kind":"manifest","created_at":"2022-07-24T20:32:00.591Z","updated_at":"2022-07-24T20:32:00.591Z","repository_link":"https://github.com/onecodex/finch-rs/blob/master/lib/Cargo.toml","dependencies":[{"id":379178022,"package_name":"bincode","ecosystem":"cargo","requirements":"1.2.0","direct":true,"kind":"runtime","optional":false},{"id":379178023,"package_name":"capnp","ecosystem":"cargo","requirements":"0.14","direct":true,"kind":"runtime","optional":false},{"id":379178024,"package_name":"memmap","ecosystem":"cargo","requirements":"0.7.0","direct":true,"kind":"runtime","optional":false},{"id":379178025,"package_name":"murmurhash3","ecosystem":"cargo","requirements":"0.0.5","direct":true,"kind":"runtime","optional":false},{"id":379178026,"package_name":"ndarray","ecosystem":"cargo","requirements":"0.14","direct":true,"kind":"runtime","optional":false},{"id":379178027,"package_name":"needletail","ecosystem":"cargo","requirements":"0.4","direct":true,"kind":"runtime","optional":false},{"id":379178028,"package_name":"numpy","ecosystem":"cargo","requirements":"0.13","direct":true,"kind":"runtime","optional":false},{"id":379178029,"package_name":"pyo3","ecosystem":"cargo","requirements":"0.13","direct":true,"kind":"runtime","optional":false},{"id":379178030,"package_name":"rayon","ecosystem":"cargo","requirements":"1.2.0","direct":true,"kind":"runtime","optional":false},{"id":379178031,"package_name":"serde","ecosystem":"cargo","requirements":"1.0","direct":true,"kind":"runtime","optional":false},{"id":379178032,"package_name":"serde_json","ecosystem":"cargo","requirements":"1","direct":true,"kind":"runtime","optional":false},{"id":379178033,"package_name":"thiserror","ecosystem":"cargo","requirements":"1","direct":true,"kind":"runtime","optional":false},{"id":379178034,"package_name":"predicates","ecosystem":"cargo","requirements":"1","direct":true,"kind":"development","optional":false},{"id":379178035,"package_name":"proptest","ecosystem":"cargo","requirements":"0.10","direct":true,"kind":"development","optional":false}]},{"ecosystem":"actions","filepath":".github/workflows/ci.yml","sha":null,"kind":"manifest","created_at":"2023-01-13T20:12:29.747Z","updated_at":"2023-01-13T20:12:29.747Z","repository_link":"https://github.com/onecodex/finch-rs/blob/master/.github/workflows/ci.yml","dependencies":[{"id":6891256129,"package_name":"actions/checkout","ecosystem":"actions","requirements":"master","direct":true,"kind":"composite","optional":false},{"id":6891256130,"package_name":"actions-rs/toolchain","ecosystem":"actions","requirements":"v1","direct":true,"kind":"composite","optional":false},{"id":6891256131,"package_name":"actions-rs/cargo","ecosystem":"actions","requirements":"v1","direct":true,"kind":"composite","optional":false}]},{"ecosystem":"docker","filepath":"Dockerfile","sha":null,"kind":"manifest","created_at":"2023-01-13T20:12:29.805Z","updated_at":"2023-01-13T20:12:29.805Z","repository_link":"https://github.com/onecodex/finch-rs/blob/master/Dockerfile","dependencies":[{"id":6891256132,"package_name":"ekidd/rust-musl-builder","ecosystem":"docker","requirements":"stable","direct":true,"kind":"build","optional":false},{"id":6891256133,"package_name":"python","ecosystem":"docker","requirements":"3.7-slim-stretch","direct":true,"kind":"build","optional":false}]},{"ecosystem":"cargo","filepath":"Cargo.toml","sha":null,"kind":"manifest","created_at":"2024-01-06T04:42:49.063Z","updated_at":"2024-01-06T04:42:49.063Z","repository_link":"https://github.com/onecodex/finch-rs/blob/master/Cargo.toml","dependencies":[]},{"ecosystem":"pypi","filepath":"pyproject.toml","sha":null,"kind":"manifest","created_at":"2024-01-06T04:42:49.071Z","updated_at":"2024-01-06T04:42:49.071Z","repository_link":"https://github.com/onecodex/finch-rs/blob/master/pyproject.toml","dependencies":[]},{"ecosystem":"actions","filepath":".github/workflows/release.yml","sha":null,"kind":"manifest","created_at":"2025-07-15T07:52:07.513Z","updated_at":"2025-07-15T07:52:07.513Z","repository_link":"https://github.com/onecodex/finch-rs/blob/master/.github/workflows/release.yml","dependencies":[{"id":24149895244,"package_name":"actions/checkout","ecosystem":"actions","requirements":"v4","direct":true,"kind":"composite","optional":false},{"id":24149895245,"package_name":"PyO3/maturin-action","ecosystem":"actions","requirements":"v1","direct":true,"kind":"composite","optional":false},{"id":24149895246,"package_name":"actions/upload-artifact","ecosystem":"actions","requirements":"v4","direct":true,"kind":"composite","optional":false},{"id":24149895247,"package_name":"actions/download-artifact","ecosystem":"actions","requirements":"v4","direct":true,"kind":"composite","optional":false},{"id":24149895248,"package_name":"svenstaro/upload-release-action","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":24149895249,"package_name":"actions/attest-build-provenance","ecosystem":"actions","requirements":"v1","direct":true,"kind":"composite","optional":false}]}],"score":18.52893155866878,"created_at":"2025-09-04T09:18:07.872Z","updated_at":"2025-10-07T08:04:43.045Z","avatar_url":"https://github.com/onecodex.png","language":"Rust","category":"Scientific Software","sub_category":"Peer-reviewed","monthly_downloads":131,"funding_links":[],"readme_doi_urls":["https://doi.org/10.21105/joss.00505"],"works":{},"citation_counts":{},"total_citations":0,"keywords_from_contributors":["bioinformatics","simulator","mesh"],"project_url":"https://science.ecosyste.ms/api/v1/projects/2917","html_url":"https://science.ecosyste.ms/projects/2917"}