{"id":305,"name":"A MATLAB-based Instrument Control (MIC) package for fluorescence imaging","description":"A MATLAB-based Instrument Control (MIC) package for fluorescence imaging - Published in JOSS (2025)","url":"https://github.com/lidkelab/matlab-instrument-control","last_synced_at":"2025-09-04T15:58:24.342Z","repository":{"id":47070053,"uuid":"101657160","full_name":"LidkeLab/matlab-instrument-control","owner":"LidkeLab","description":"A collection of MATLAB classes to control various equipment used in fluorescence microscopy","archived":false,"fork":false,"pushed_at":"2025-08-08T01:10:21.000Z","size":14523,"stargazers_count":9,"open_issues_count":1,"forks_count":6,"subscribers_count":1,"default_branch":"main","last_synced_at":"2025-08-27T22:55:23.651Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":null,"language":"MATLAB","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"mit","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/LidkeLab.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":"CITATION.cff","codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":".zenodo.json"}},"created_at":"2017-08-28T15:22:55.000Z","updated_at":"2025-03-31T03:59:10.000Z","dependencies_parsed_at":"2024-03-22T00:29:15.194Z","dependency_job_id":"07046129-82f6-430c-a327-72d7bfac9b5f","html_url":"https://github.com/LidkeLab/matlab-instrument-control","commit_stats":null,"previous_names":[],"tags_count":4,"template":false,"template_full_name":null,"purl":"pkg:github/LidkeLab/matlab-instrument-control","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/LidkeLab%2Fmatlab-instrument-control","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/LidkeLab%2Fmatlab-instrument-control/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/LidkeLab%2Fmatlab-instrument-control/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/LidkeLab%2Fmatlab-instrument-control/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/LidkeLab","download_url":"https://codeload.github.com/LidkeLab/matlab-instrument-control/tar.gz/refs/heads/main","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/LidkeLab%2Fmatlab-instrument-control/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":273589535,"owners_count":25132861,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-09-04T02:00:08.968Z","response_time":61,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"owner":{"login":"LidkeLab","name":"LidkeLab","uuid":"13421505","kind":"organization","description":null,"email":null,"website":null,"location":null,"twitter":null,"company":null,"icon_url":"https://avatars.githubusercontent.com/u/13421505?v=4","repositories_count":4,"last_synced_at":"2023-03-04T18:18:16.521Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/LidkeLab","funding_links":[],"total_stars":null,"followers":null,"following":null,"created_at":"2022-11-14T22:27:31.302Z","updated_at":"2023-03-04T18:18:16.572Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/LidkeLab","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/LidkeLab/repositories"},"packages":[],"commits":{"id":9624607,"full_name":"LidkeLab/matlab-instrument-control","default_branch":"main","committers":[{"name":"dschodt","email":"schodtd@unm.edu","login":null,"count":535},{"name":"sajjad88","email":"56313813+sajjad88","login":"sajjad88","count":141},{"name":"Hanieh","email":"hmfarsibaf@unm.edu","login":"HaniehFarsibaf","count":106},{"name":"Sandeep","email":"pallikkuth@unm.edu","login":"spallikkuth","count":79},{"name":"Michael Wester","email":"wester@math.unm.edu","login":"MJWester1","count":63},{"name":"dschodt","email":"35635770+dschodt","login":"dschodt","count":51},{"name":"ellyse-taylor","email":"84996743+ellyse-taylor","login":"ellyse-taylor","count":32},{"name":"Keith Lidke","email":"klidke@unm.edu","login":"kalidke","count":32},{"name":"Rob Campbell","email":"raacampbell","login":"raacampbell","count":20},{"name":"kiwibogo","email":"kiwibogo@gmail.com","login":"kiwibogo","count":14},{"name":"MohamadFazel","email":"fazel@unm.edu","login":null,"count":5},{"name":"GitHub Actions Bot","email":"github-actions[bot]","login":"github-actions[bot]","count":3},{"name":"Michael Wester","email":"wester@salud.unm.edu","login":"MJWester","count":3},{"name":"Ali","email":"akazemins@unm.edu","login":"AliKNS","count":1},{"name":"Gert-Jan Bakker","email":"37897204+gerritsmedia","login":"gerritsmedia","count":1}],"total_commits":1086,"total_committers":15,"total_bot_commits":0,"total_bot_committers":0,"mean_commits":72.4,"dds":0.507366482504604,"past_year_committers":[{"name":"sajjad88","email":"56313813+sajjad88","login":"sajjad88","count":87},{"name":"Michael Wester","email":"wester@math.unm.edu","login":"MJWester1","count":47},{"name":"Rob Campbell","email":"raacampbell","login":"raacampbell","count":20},{"name":"ellyse-taylor","email":"84996743+ellyse-taylor","login":"ellyse-taylor","count":4},{"name":"GitHub Actions Bot","email":"github-actions[bot]","login":"github-actions[bot]","count":3},{"name":"TIRF","email":"kalidke@gmail.com","login":"kalidke","count":3}],"past_year_total_commits":164,"past_year_total_committers":6,"past_year_total_bot_commits":0,"past_year_total_bot_committers":0,"past_year_mean_commits":27.333333333333332,"past_year_dds":0.4695121951219512,"last_synced_at":"2025-08-07T05:46:22.132Z","last_synced_commit":"2df00375965131afd04c21989c5d781ac110b611","created_at":"2025-04-11T10:22:57.926Z","updated_at":"2025-08-07T05:46:22.356Z","commits_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories/LidkeLab%2Fmatlab-instrument-control/commits","host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-08-08T00:00:12.331Z","repositories_count":5414036,"commits_count":848479601,"contributors_count":30912980,"owners_count":904078,"icon_url":"https://github.com/github.png","host_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories"}},"issues_stats":{"full_name":"LidkeLab/matlab-instrument-control","html_url":"https://github.com/LidkeLab/matlab-instrument-control","last_synced_at":"2025-08-31T09:13:18.987Z","status":null,"issues_count":25,"pull_requests_count":77,"avg_time_to_close_issue":40397008.44,"avg_time_to_close_pull_request":4618017.171052632,"issues_closed_count":25,"pull_requests_closed_count":76,"pull_request_authors_count":12,"issue_authors_count":4,"avg_comments_per_issue":1.52,"avg_comments_per_pull_request":0.19480519480519481,"merged_pull_requests_count":61,"bot_issues_count":0,"bot_pull_requests_count":0,"past_year_issues_count":19,"past_year_pull_requests_count":10,"past_year_avg_time_to_close_issue":6940702.736842105,"past_year_avg_time_to_close_pull_request":1231397.5555555555,"past_year_issues_closed_count":19,"past_year_pull_requests_closed_count":9,"past_year_pull_request_authors_count":4,"past_year_issue_authors_count":2,"past_year_avg_comments_per_issue":1.9473684210526316,"past_year_avg_comments_per_pull_request":0.7,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":7,"created_at":"2025-04-11T10:22:59.932Z","updated_at":"2025-09-03T04:29:46.277Z","repository_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/LidkeLab%2Fmatlab-instrument-control","issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/LidkeLab%2Fmatlab-instrument-control/issues","issue_labels_count":{},"pull_request_labels_count":{},"issue_author_associations_count":{"NONE":12,"CONTRIBUTOR":7,"MEMBER":6},"pull_request_author_associations_count":{"CONTRIBUTOR":65,"MEMBER":31,"NONE":10},"issue_authors":{"raacampbell":14,"kalidke":5,"bencardoen":5,"spallikkuth":1},"pull_request_authors":{"kiwibogo":32,"dschodt":17,"sajjad88":14,"HaniehFarsibaf":14,"ellyse-taylor":7,"spallikkuth":7,"kalidke":4,"raacampbell":4,"MJWester":3,"MahsaHabibi":2,"dougaboo":1,"gerritsmedia":1},"host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-03T00:00:08.273Z","repositories_count":10067183,"issues_count":31166656,"pull_requests_count":94972760,"authors_count":10688095,"icon_url":"https://github.com/github.png","host_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories","owners_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/owners","authors_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors"},"past_year_issue_labels_count":{},"past_year_pull_request_labels_count":{},"past_year_issue_author_associations_count":{"NONE":12,"CONTRIBUTOR":7},"past_year_pull_request_author_associations_count":{"CONTRIBUTOR":15,"MEMBER":2,"NONE":1},"past_year_issue_authors":{"raacampbell":14,"bencardoen":5},"past_year_pull_request_authors":{"kiwibogo":6,"sajjad88":6,"raacampbell":4,"MJWester":2},"maintainers":[{"login":"dschodt","count":17,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/dschodt"},{"login":"kalidke","count":9,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/kalidke"},{"login":"spallikkuth","count":8,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/spallikkuth"},{"login":"MJWester","count":3,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/MJWester"}],"active_maintainers":[{"login":"MJWester","count":2,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/MJWester"}]},"events":{"total":{"CreateEvent":15,"ReleaseEvent":3,"IssuesEvent":24,"WatchEvent":3,"DeleteEvent":10,"IssueCommentEvent":39,"PushEvent":124,"PullRequestReviewEvent":2,"PullRequestEvent":22,"ForkEvent":2},"last_year":{"CreateEvent":15,"ReleaseEvent":3,"IssuesEvent":24,"WatchEvent":3,"DeleteEvent":10,"IssueCommentEvent":39,"PushEvent":124,"PullRequestReviewEvent":2,"PullRequestEvent":22,"ForkEvent":2}},"keywords":[],"dependencies":[],"score":5.0106352940962555,"created_at":"2025-09-04T09:17:32.993Z","updated_at":"2025-10-07T08:04:24.292Z","avatar_url":"https://github.com/LidkeLab.png","language":"MATLAB","category":"Scientific Software","sub_category":"Peer-reviewed","monthly_downloads":0,"funding_links":[],"readme_doi_urls":["https://doi.org/10.21105/joss.07275","https://doi.org/10.1364/BOE.477501","https://doi.org/10.1038/s41467-022-34894-2"],"works":{},"citation_counts":{},"total_citations":0,"keywords_from_contributors":[],"project_url":"https://science.ecosyste.ms/api/v1/projects/305","html_url":"https://science.ecosyste.ms/projects/305","bibtex_url":"https://science.ecosyste.ms/projects/305/export.bibtex","apalike_url":"https://science.ecosyste.ms/projects/305/export.apalike"}