{"id":33947,"name":"website","description":"Source code for hbeale website","url":"https://github.com/hbeale/website","last_synced_at":"2025-09-05T06:01:29.382Z","repository":{"id":199939605,"uuid":"704143826","full_name":"hbeale/website","owner":"hbeale","description":"Source code for hbeale website","archived":false,"fork":false,"pushed_at":"2025-08-18T02:22:10.000Z","size":255,"stargazers_count":0,"open_issues_count":1,"forks_count":0,"subscribers_count":1,"default_branch":"main","last_synced_at":"2025-08-18T04:22:22.720Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":"http://www.hbeale.com","language":"HTML","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"bsd-3-clause","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/hbeale.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE.md","code_of_conduct":null,"threat_model":null,"audit":null,"citation":"CITATION.cff","codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null}},"created_at":"2023-10-12T16:15:56.000Z","updated_at":"2023-10-12T17:57:11.000Z","dependencies_parsed_at":"2023-10-14T15:40:00.566Z","dependency_job_id":"de018b1c-dc2e-4dbf-8d9d-4003c3bce452","html_url":"https://github.com/hbeale/website","commit_stats":null,"previous_names":["hbeale/website"],"tags_count":0,"template":false,"template_full_name":"greenelab/lab-website-template","purl":"pkg:github/hbeale/website","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/hbeale%2Fwebsite","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/hbeale%2Fwebsite/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/hbeale%2Fwebsite/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/hbeale%2Fwebsite/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/hbeale","download_url":"https://codeload.github.com/hbeale/website/tar.gz/refs/heads/main","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/hbeale%2Fwebsite/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":273718335,"owners_count":25155488,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-09-05T02:00:09.113Z","response_time":402,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"owner":{"login":"hbeale","name":null,"uuid":"54659","kind":"user","description":null,"email":"","website":null,"location":null,"twitter":null,"company":null,"icon_url":"https://avatars.githubusercontent.com/u/54659?v=4","repositories_count":2,"last_synced_at":"2023-03-23T11:39:42.029Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/hbeale","funding_links":[],"total_stars":null,"followers":null,"following":null,"created_at":"2022-11-03T17:25:26.671Z","updated_at":"2023-03-23T11:39:42.056Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/hbeale","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/hbeale/repositories"},"packages":[],"commits":{"message":"Repository syncing started."},"issues_stats":{"full_name":"hbeale/website","html_url":"https://github.com/hbeale/website","last_synced_at":null,"status":null,"issues_count":null,"pull_requests_count":null,"avg_time_to_close_issue":null,"avg_time_to_close_pull_request":null,"issues_closed_count":null,"pull_requests_closed_count":null,"pull_request_authors_count":null,"issue_authors_count":null,"avg_comments_per_issue":null,"avg_comments_per_pull_request":null,"merged_pull_requests_count":null,"bot_issues_count":null,"bot_pull_requests_count":null,"past_year_issues_count":null,"past_year_pull_requests_count":null,"past_year_avg_time_to_close_issue":null,"past_year_avg_time_to_close_pull_request":null,"past_year_issues_closed_count":null,"past_year_pull_requests_closed_count":null,"past_year_pull_request_authors_count":null,"past_year_issue_authors_count":null,"past_year_avg_comments_per_issue":null,"past_year_avg_comments_per_pull_request":null,"past_year_bot_issues_count":null,"past_year_bot_pull_requests_count":null,"past_year_merged_pull_requests_count":null,"created_at":"2025-09-05T06:00:27.614Z","updated_at":"2025-09-05T06:00:27.614Z","repository_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/hbeale%2Fwebsite","issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/hbeale%2Fwebsite/issues","issue_labels_count":{},"pull_request_labels_count":{},"issue_author_associations_count":{},"pull_request_author_associations_count":{},"issue_authors":{},"pull_request_authors":{},"host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-05T00:00:10.444Z","repositories_count":10087320,"issues_count":31306968,"pull_requests_count":96469683,"authors_count":10696025,"icon_url":"https://github.com/github.png","host_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories","owners_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/owners","authors_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors"},"past_year_issue_labels_count":{},"past_year_pull_request_labels_count":{},"past_year_issue_author_associations_count":{},"past_year_pull_request_author_associations_count":{},"past_year_issue_authors":{},"past_year_pull_request_authors":{},"maintainers":[],"active_maintainers":[]},"events":{"total":{"PushEvent":39},"last_year":{"PushEvent":39}},"keywords":[],"dependencies":[{"ecosystem":"actions","filepath":".github/workflows/on-pull-request.yml","sha":null,"kind":"manifest","created_at":"2023-10-14T15:39:57.339Z","updated_at":"2023-10-14T15:39:57.339Z","repository_link":"https://github.com/hbeale/website/blob/main/.github/workflows/on-pull-request.yml","dependencies":[]},{"ecosystem":"actions","filepath":".github/workflows/on-push.yml","sha":null,"kind":"manifest","created_at":"2023-10-14T15:39:57.569Z","updated_at":"2023-10-14T15:39:57.569Z","repository_link":"https://github.com/hbeale/website/blob/main/.github/workflows/on-push.yml","dependencies":[]},{"ecosystem":"actions","filepath":".github/workflows/on-schedule.yaml","sha":null,"kind":"manifest","created_at":"2023-10-14T15:39:57.604Z","updated_at":"2023-10-14T15:39:57.604Z","repository_link":"https://github.com/hbeale/website/blob/main/.github/workflows/on-schedule.yaml","dependencies":[]},{"ecosystem":"actions","filepath":".github/workflows/update-citations.yaml","sha":null,"kind":"manifest","created_at":"2023-10-14T15:39:57.668Z","updated_at":"2023-10-14T15:39:57.668Z","repository_link":"https://github.com/hbeale/website/blob/main/.github/workflows/update-citations.yaml","dependencies":[{"id":14197920183,"package_name":"crazy-max/ghaction-dump-context","ecosystem":"actions","requirements":"v1","direct":true,"kind":"composite","optional":false},{"id":14197920184,"package_name":"actions/checkout","ecosystem":"actions","requirements":"v3","direct":true,"kind":"composite","optional":false},{"id":14197920185,"package_name":"actions/setup-python","ecosystem":"actions","requirements":"v4","direct":true,"kind":"composite","optional":false},{"id":14197920186,"package_name":"tj-actions/verify-changed-files","ecosystem":"actions","requirements":"v13","direct":true,"kind":"composite","optional":false},{"id":14197920639,"package_name":"stefanzweifel/git-auto-commit-action","ecosystem":"actions","requirements":"v4","direct":true,"kind":"composite","optional":false},{"id":14197920640,"package_name":"peter-evans/create-pull-request","ecosystem":"actions","requirements":"v4","direct":true,"kind":"composite","optional":false}]},{"ecosystem":"actions","filepath":".github/workflows/update-url.yaml","sha":null,"kind":"manifest","created_at":"2023-10-14T15:39:59.027Z","updated_at":"2023-10-14T15:39:59.027Z","repository_link":"https://github.com/hbeale/website/blob/main/.github/workflows/update-url.yaml","dependencies":[{"id":14197920867,"package_name":"crazy-max/ghaction-dump-context","ecosystem":"actions","requirements":"v1","direct":true,"kind":"composite","optional":false},{"id":14197920868,"package_name":"actions/configure-pages","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":14197920869,"package_name":"actions/checkout","ecosystem":"actions","requirements":"v3","direct":true,"kind":"composite","optional":false},{"id":14197920870,"package_name":"actions/github-script","ecosystem":"actions","requirements":"v6","direct":true,"kind":"composite","optional":false},{"id":14197920871,"package_name":"tj-actions/verify-changed-files","ecosystem":"actions","requirements":"v13","direct":true,"kind":"composite","optional":false},{"id":14197920872,"package_name":"stefanzweifel/git-auto-commit-action","ecosystem":"actions","requirements":"v4","direct":true,"kind":"composite","optional":false}]},{"ecosystem":"docker","filepath":".docker/Dockerfile","sha":null,"kind":"manifest","created_at":"2023-10-14T15:39:59.118Z","updated_at":"2023-10-14T15:39:59.118Z","repository_link":"https://github.com/hbeale/website/blob/main/.docker/Dockerfile","dependencies":[{"id":14197920891,"package_name":"ruby","ecosystem":"docker","requirements":"3.1.2","direct":true,"kind":"build","optional":false}]},{"ecosystem":"pypi","filepath":"_cite/requirements.txt","sha":null,"kind":"manifest","created_at":"2023-10-14T15:39:59.165Z","updated_at":"2023-10-14T15:39:59.165Z","repository_link":"https://github.com/hbeale/website/blob/main/_cite/requirements.txt","dependencies":[{"id":14197920892,"package_name":"manubot","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":14197920895,"package_name":"PyYAML","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":14197920896,"package_name":"diskcache","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":14197920897,"package_name":"rich","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":14197920898,"package_name":"python-dotenv","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":14197920899,"package_name":"google-search-results","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false}]},{"ecosystem":"rubygems","filepath":"Gemfile","sha":null,"kind":"manifest","created_at":"2023-10-14T15:39:59.939Z","updated_at":"2023-10-14T15:39:59.939Z","repository_link":"https://github.com/hbeale/website/blob/main/Gemfile","dependencies":[{"id":14197921535,"package_name":"jekyll","ecosystem":"rubygems","requirements":"~\u003e 4.3","direct":true,"kind":"runtime","optional":false},{"id":14197921536,"package_name":"webrick","ecosystem":"rubygems","requirements":"~\u003e 1.7","direct":true,"kind":"runtime","optional":false},{"id":14197921537,"package_name":"jekyll-spaceship","ecosystem":"rubygems","requirements":"\u003e= 0","direct":true,"kind":"development","optional":false},{"id":14197921538,"package_name":"jekyll-sitemap","ecosystem":"rubygems","requirements":"\u003e= 0","direct":true,"kind":"development","optional":false},{"id":14197921539,"package_name":"jekyll-redirect-from","ecosystem":"rubygems","requirements":"\u003e= 0","direct":true,"kind":"development","optional":false},{"id":14197921540,"package_name":"jekyll-feed","ecosystem":"rubygems","requirements":"\u003e= 0","direct":true,"kind":"development","optional":false},{"id":14197921541,"package_name":"jekyll-last-modified-at","ecosystem":"rubygems","requirements":"\u003e= 0","direct":true,"kind":"development","optional":false}]},{"ecosystem":"rubygems","filepath":"Gemfile.lock","sha":null,"kind":"lockfile","created_at":"2023-10-14T15:40:00.356Z","updated_at":"2023-10-14T15:40:00.356Z","repository_link":"https://github.com/hbeale/website/blob/main/Gemfile.lock","dependencies":[{"id":14197921542,"package_name":"addressable","ecosystem":"rubygems","requirements":"2.8.1","direct":false,"kind":"runtime","optional":false},{"id":14197921543,"package_name":"colorator","ecosystem":"rubygems","requirements":"1.1.0","direct":false,"kind":"runtime","optional":false},{"id":14197921544,"package_name":"concurrent-ruby","ecosystem":"rubygems","requirements":"1.2.2","direct":false,"kind":"runtime","optional":false},{"id":14197921545,"package_name":"em-websocket","ecosystem":"rubygems","requirements":"0.5.3","direct":false,"kind":"runtime","optional":false},{"id":14197921546,"package_name":"eventmachine","ecosystem":"rubygems","requirements":"1.2.7","direct":false,"kind":"runtime","optional":false},{"id":14197921547,"package_name":"ffi","ecosystem":"rubygems","requirements":"1.15.5","direct":false,"kind":"runtime","optional":false},{"id":14197921548,"package_name":"forwardable-extended","ecosystem":"rubygems","requirements":"2.6.0","direct":false,"kind":"runtime","optional":false},{"id":14197921549,"package_name":"gemoji","ecosystem":"rubygems","requirements":"3.0.1","direct":false,"kind":"runtime","optional":false},{"id":14197921550,"package_name":"google-protobuf","ecosystem":"rubygems","requirements":"3.22.0","direct":false,"kind":"runtime","optional":false},{"id":14197921551,"package_name":"http_parser.rb","ecosystem":"rubygems","requirements":"0.8.0","direct":false,"kind":"runtime","optional":false},{"id":14197921552,"package_name":"i18n","ecosystem":"rubygems","requirements":"1.12.0","direct":false,"kind":"runtime","optional":false},{"id":14197921553,"package_name":"jekyll","ecosystem":"rubygems","requirements":"4.3.2","direct":false,"kind":"runtime","optional":false},{"id":14197921554,"package_name":"jekyll-feed","ecosystem":"rubygems","requirements":"0.17.0","direct":false,"kind":"runtime","optional":false},{"id":14197921555,"package_name":"jekyll-last-modified-at","ecosystem":"rubygems","requirements":"1.3.0","direct":false,"kind":"runtime","optional":false},{"id":14197921556,"package_name":"jekyll-redirect-from","ecosystem":"rubygems","requirements":"0.16.0","direct":false,"kind":"runtime","optional":false},{"id":14197921557,"package_name":"jekyll-sass-converter","ecosystem":"rubygems","requirements":"3.0.0","direct":false,"kind":"runtime","optional":false},{"id":14197921558,"package_name":"jekyll-sitemap","ecosystem":"rubygems","requirements":"1.4.0","direct":false,"kind":"runtime","optional":false},{"id":14197921559,"package_name":"jekyll-spaceship","ecosystem":"rubygems","requirements":"0.10.2","direct":false,"kind":"runtime","optional":false},{"id":14197921560,"package_name":"jekyll-watch","ecosystem":"rubygems","requirements":"2.2.1","direct":false,"kind":"runtime","optional":false},{"id":14197921561,"package_name":"kramdown","ecosystem":"rubygems","requirements":"2.4.0","direct":false,"kind":"runtime","optional":false},{"id":14197921562,"package_name":"kramdown-parser-gfm","ecosystem":"rubygems","requirements":"1.1.0","direct":false,"kind":"runtime","optional":false},{"id":14197921563,"package_name":"liquid","ecosystem":"rubygems","requirements":"4.0.4","direct":false,"kind":"runtime","optional":false},{"id":14197921564,"package_name":"listen","ecosystem":"rubygems","requirements":"3.8.0","direct":false,"kind":"runtime","optional":false},{"id":14197921565,"package_name":"mercenary","ecosystem":"rubygems","requirements":"0.4.0","direct":false,"kind":"runtime","optional":false},{"id":14197921566,"package_name":"mini_portile2","ecosystem":"rubygems","requirements":"2.8.1","direct":false,"kind":"runtime","optional":false},{"id":14197921567,"package_name":"nokogiri","ecosystem":"rubygems","requirements":"1.13.10","direct":false,"kind":"runtime","optional":false},{"id":14197921568,"package_name":"pathutil","ecosystem":"rubygems","requirements":"0.16.2","direct":false,"kind":"runtime","optional":false},{"id":14197921569,"package_name":"posix-spawn","ecosystem":"rubygems","requirements":"0.3.15","direct":false,"kind":"runtime","optional":false},{"id":14197921570,"package_name":"public_suffix","ecosystem":"rubygems","requirements":"5.0.1","direct":false,"kind":"runtime","optional":false},{"id":14197921571,"package_name":"racc","ecosystem":"rubygems","requirements":"1.6.2","direct":false,"kind":"runtime","optional":false},{"id":14197921572,"package_name":"rainbow","ecosystem":"rubygems","requirements":"3.1.1","direct":false,"kind":"runtime","optional":false},{"id":14197921573,"package_name":"rb-fsevent","ecosystem":"rubygems","requirements":"0.11.2","direct":false,"kind":"runtime","optional":false},{"id":14197921574,"package_name":"rb-inotify","ecosystem":"rubygems","requirements":"0.10.1","direct":false,"kind":"runtime","optional":false},{"id":14197921575,"package_name":"rexml","ecosystem":"rubygems","requirements":"3.2.5","direct":false,"kind":"runtime","optional":false},{"id":14197921576,"package_name":"rouge","ecosystem":"rubygems","requirements":"3.30.0","direct":false,"kind":"runtime","optional":false},{"id":14197921577,"package_name":"safe_yaml","ecosystem":"rubygems","requirements":"1.0.5","direct":false,"kind":"runtime","optional":false},{"id":14197921578,"package_name":"sass-embedded","ecosystem":"rubygems","requirements":"1.58.3","direct":false,"kind":"runtime","optional":false},{"id":14197921579,"package_name":"terminal-table","ecosystem":"rubygems","requirements":"3.0.2","direct":false,"kind":"runtime","optional":false},{"id":14197921580,"package_name":"unicode-display_width","ecosystem":"rubygems","requirements":"2.4.2","direct":false,"kind":"runtime","optional":false},{"id":14197921581,"package_name":"webrick","ecosystem":"rubygems","requirements":"1.8.1","direct":false,"kind":"runtime","optional":false},{"id":14197921582,"package_name":"bundler","ecosystem":"rubygems","requirements":"2.4.7","direct":false,"kind":"runtime","optional":false}]},{"ecosystem":"actions","filepath":".github/workflows/build-preview.yaml","sha":null,"kind":"manifest","created_at":"2023-10-14T15:39:54.223Z","updated_at":"2023-10-14T15:39:54.223Z","repository_link":"https://github.com/hbeale/website/blob/main/.github/workflows/build-preview.yaml","dependencies":[{"id":14197919654,"package_name":"crazy-max/ghaction-dump-context","ecosystem":"actions","requirements":"v1","direct":true,"kind":"composite","optional":false},{"id":14197919655,"package_name":"actions/checkout","ecosystem":"actions","requirements":"v3","direct":true,"kind":"composite","optional":false},{"id":14197919656,"package_name":"ruby/setup-ruby","ecosystem":"actions","requirements":"v1","direct":true,"kind":"composite","optional":false},{"id":14197919657,"package_name":"actions/configure-pages","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":14197919658,"package_name":"rossjrw/pr-preview-action","ecosystem":"actions","requirements":"v1","direct":true,"kind":"composite","optional":false}]},{"ecosystem":"actions","filepath":".github/workflows/build-site.yaml","sha":null,"kind":"manifest","created_at":"2023-10-14T15:39:55.684Z","updated_at":"2023-10-14T15:39:55.684Z","repository_link":"https://github.com/hbeale/website/blob/main/.github/workflows/build-site.yaml","dependencies":[{"id":14197919678,"package_name":"crazy-max/ghaction-dump-context","ecosystem":"actions","requirements":"v1","direct":true,"kind":"composite","optional":false},{"id":14197919679,"package_name":"actions/checkout","ecosystem":"actions","requirements":"v3","direct":true,"kind":"composite","optional":false},{"id":14197919680,"package_name":"ruby/setup-ruby","ecosystem":"actions","requirements":"v1","direct":true,"kind":"composite","optional":false},{"id":14197919681,"package_name":"actions/configure-pages","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":14197919682,"package_name":"JamesIves/github-pages-deploy-action","ecosystem":"actions","requirements":"v4","direct":true,"kind":"composite","optional":false}]},{"ecosystem":"actions","filepath":".github/workflows/first-time-setup.yaml","sha":null,"kind":"manifest","created_at":"2023-10-14T15:39:55.927Z","updated_at":"2023-10-14T15:39:55.927Z","repository_link":"https://github.com/hbeale/website/blob/main/.github/workflows/first-time-setup.yaml","dependencies":[{"id":14197919683,"package_name":"crazy-max/ghaction-dump-context","ecosystem":"actions","requirements":"v1","direct":true,"kind":"composite","optional":false},{"id":14197919684,"package_name":"peterjgrainger/action-create-branch","ecosystem":"actions","requirements":"v2.4.0","direct":true,"kind":"composite","optional":false},{"id":14197919851,"package_name":"actions/checkout","ecosystem":"actions","requirements":"v3","direct":true,"kind":"composite","optional":false},{"id":14197919852,"package_name":"stefanzweifel/git-auto-commit-action","ecosystem":"actions","requirements":"v4","direct":true,"kind":"composite","optional":false},{"id":14197919853,"package_name":"actions/github-script","ecosystem":"actions","requirements":"v6","direct":true,"kind":"composite","optional":false}]},{"ecosystem":"actions","filepath":".github/workflows/on-pages.yaml","sha":null,"kind":"manifest","created_at":"2023-10-14T15:39:56.931Z","updated_at":"2023-10-14T15:39:56.931Z","repository_link":"https://github.com/hbeale/website/blob/main/.github/workflows/on-pages.yaml","dependencies":[]}],"score":null,"created_at":"2025-09-04T15:51:07.289Z","updated_at":"2025-10-07T08:14:15.354Z","avatar_url":"https://github.com/hbeale.png","language":"HTML","category":null,"sub_category":null,"monthly_downloads":0,"funding_links":[],"readme_doi_urls":[],"works":{},"citation_counts":{},"total_citations":0,"keywords_from_contributors":[],"project_url":"https://science.ecosyste.ms/api/v1/projects/33947","html_url":"https://science.ecosyste.ms/projects/33947","bibtex_url":"https://science.ecosyste.ms/projects/33947/export.bibtex","apalike_url":"https://science.ecosyste.ms/projects/33947/export.apalike"}