{"id":3552,"name":"mzkit","description":"Data toolkits for processing NMR, MALDI MSI, MALDI single cell, Raman Spectroscopy, LC-MS and GC-MS raw data, chemoinformatics data analysis and data visualization.","url":"https://github.com/xieguigang/mzkit","last_synced_at":"2025-09-04T17:05:27.591Z","repository":{"id":37485376,"uuid":"86005665","full_name":"xieguigang/mzkit","owner":"xieguigang","description":"Data toolkits for processing NMR, MALDI MSI, MALDI single cell, Raman Spectroscopy, LC-MS and GC-MS raw data, chemoinformatics data analysis and data visualization.","archived":false,"fork":false,"pushed_at":"2025-09-03T15:29:09.000Z","size":533280,"stargazers_count":62,"open_issues_count":3,"forks_count":17,"subscribers_count":2,"default_branch":"master","last_synced_at":"2025-09-03T17:30:34.385Z","etag":null,"topics":["chemoinformatics","gc-ms","gcxgc","kegg","lc-ms","lipidomics","maldi","mass-spectrometry","metabolomics","metadna","ms-dial","ms-imaging","mzkit","r-sharp","raman-spectroscopy","single-cell","single-cell-metabolism","visualbasic"],"latest_commit_sha":null,"homepage":"https://mzkit.org","language":"Visual Basic .NET","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"mit","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/xieguigang.png","metadata":{"files":{"readme":"README.md","changelog":"HISTORY.md","contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":"CODE_OF_CONDUCT.md","threat_model":null,"audit":null,"citation":"CITATION.cff","codeowners":null,"security":"SECURITY.md","support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null,"notice":null,"maintainers":null,"copyright":null,"agents":null,"dco":null,"cla":null}},"created_at":"2017-03-23T23:03:07.000Z","updated_at":"2025-09-03T15:29:12.000Z","dependencies_parsed_at":"2023-10-14T14:22:46.467Z","dependency_job_id":"657787a3-e5d3-4c02-b18d-4da037917fb7","html_url":"https://github.com/xieguigang/mzkit","commit_stats":null,"previous_names":[],"tags_count":8,"template":false,"template_full_name":null,"purl":"pkg:github/xieguigang/mzkit","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/xieguigang%2Fmzkit","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/xieguigang%2Fmzkit/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/xieguigang%2Fmzkit/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/xieguigang%2Fmzkit/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/xieguigang","download_url":"https://codeload.github.com/xieguigang/mzkit/tar.gz/refs/heads/master","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/xieguigang%2Fmzkit/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":273641905,"owners_count":25142248,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-09-04T02:00:08.968Z","response_time":61,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"owner":{"login":"xieguigang","name":"この中二病に爆焔を！","uuid":"9410171","kind":"user","description":"Working on Engineered bacteria CAD design on its genome from scratch. Writing scientific computing software for Tianhe \u0026 Sunway TaihuLight supercomputer.","email":"","website":"https://gcmodeller.org","location":"Guilin, China (中國 桂林)","twitter":"xieguigang","company":"@SMRUCC genomics Institute","icon_url":"https://avatars.githubusercontent.com/u/9410171?u=5b76d49b29b192abd2c752ec9299f15f0e32ded6\u0026v=4","repositories_count":55,"last_synced_at":"2024-04-17T00:51:01.160Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/xieguigang","funding_links":[],"total_stars":221,"followers":255,"following":207,"created_at":"2022-11-05T14:36:58.355Z","updated_at":"2024-04-17T00:51:15.176Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/xieguigang","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/xieguigang/repositories"},"packages":[],"commits":{"message":"Repository syncing started."},"issues_stats":{"full_name":"xieguigang/mzkit","html_url":"https://github.com/xieguigang/mzkit","last_synced_at":"2025-08-31T10:57:01.663Z","status":null,"issues_count":0,"pull_requests_count":3,"avg_time_to_close_issue":null,"avg_time_to_close_pull_request":173.0,"issues_closed_count":0,"pull_requests_closed_count":2,"pull_request_authors_count":1,"issue_authors_count":0,"avg_comments_per_issue":null,"avg_comments_per_pull_request":0.0,"merged_pull_requests_count":2,"bot_issues_count":0,"bot_pull_requests_count":0,"past_year_issues_count":0,"past_year_pull_requests_count":3,"past_year_avg_time_to_close_issue":null,"past_year_avg_time_to_close_pull_request":173.0,"past_year_issues_closed_count":0,"past_year_pull_requests_closed_count":2,"past_year_pull_request_authors_count":1,"past_year_issue_authors_count":0,"past_year_avg_comments_per_issue":null,"past_year_avg_comments_per_pull_request":0.0,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":2,"created_at":"2025-08-29T12:49:00.254Z","updated_at":"2025-09-02T03:19:25.099Z","repository_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/xieguigang%2Fmzkit","issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/xieguigang%2Fmzkit/issues","issue_labels_count":{},"pull_request_labels_count":{},"issue_author_associations_count":{"NONE":2},"pull_request_author_associations_count":{"OWNER":5,"NONE":2},"issue_authors":{"YUANMENG-1":2},"pull_request_authors":{"xieguigang":5,"dadazhetang":1,"fossabot":1},"host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-04T00:00:25.939Z","repositories_count":10079947,"issues_count":31294689,"pull_requests_count":96077738,"authors_count":10693120,"icon_url":"https://github.com/github.png","host_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories","owners_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/owners","authors_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors"},"past_year_issue_labels_count":{},"past_year_pull_request_labels_count":{},"past_year_issue_author_associations_count":{},"past_year_pull_request_author_associations_count":{"OWNER":3},"past_year_issue_authors":{},"past_year_pull_request_authors":{"xieguigang":3},"maintainers":[{"login":"xieguigang","count":5,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/xieguigang"}],"active_maintainers":[{"login":"xieguigang","count":3,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/xieguigang"}]},"events":{"total":{"WatchEvent":12,"DeleteEvent":2,"PushEvent":634,"PullRequestReviewEvent":1,"PullRequestEvent":4,"ForkEvent":1,"CreateEvent":3},"last_year":{"WatchEvent":12,"DeleteEvent":2,"PushEvent":634,"PullRequestReviewEvent":1,"PullRequestEvent":4,"ForkEvent":1,"CreateEvent":3}},"keywords":["chemoinformatics","gc-ms","gcxgc","kegg","lc-ms","lipidomics","maldi","mass-spectrometry","metabolomics","metadna","ms-dial","ms-imaging","mzkit","r-sharp","raman-spectroscopy","single-cell","single-cell-metabolism","visualbasic"],"dependencies":[{"ecosystem":"cran","filepath":"Rscript/Library/mzkit_app/DESCRIPTION","sha":null,"kind":"manifest","created_at":"2023-10-14T14:22:41.867Z","updated_at":"2023-10-14T14:22:41.867Z","repository_link":"https://github.com/xieguigang/mzkit/blob/master/Rscript/Library/mzkit_app/DESCRIPTION","dependencies":[]},{"ecosystem":"cran","filepath":"Rscript/R/MetaDNA/DESCRIPTION","sha":null,"kind":"manifest","created_at":"2023-10-14T14:22:42.958Z","updated_at":"2023-10-14T14:22:42.958Z","repository_link":"https://github.com/xieguigang/mzkit/blob/master/Rscript/R/MetaDNA/DESCRIPTION","dependencies":[{"id":14197403423,"package_name":"VisualBasic.R","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false}]},{"ecosystem":"cran","filepath":"Rscript/R/mzkit/DESCRIPTION","sha":null,"kind":"manifest","created_at":"2023-10-14T14:22:43.885Z","updated_at":"2023-10-14T14:22:43.885Z","repository_link":"https://github.com/xieguigang/mzkit/blob/master/Rscript/R/mzkit/DESCRIPTION","dependencies":[{"id":14197404521,"package_name":"Rcpp","ecosystem":"cran","requirements":"\u003e= 1.0.6","direct":true,"kind":"imports","optional":false}]},{"ecosystem":"cran","filepath":"Rscript/R/ptw/DESCRIPTION","sha":null,"kind":"manifest","created_at":"2023-10-14T14:22:44.635Z","updated_at":"2023-10-14T14:22:44.635Z","repository_link":"https://github.com/xieguigang/mzkit/blob/master/Rscript/R/ptw/DESCRIPTION","dependencies":[{"id":14197404579,"package_name":"RcppDE","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":14197404580,"package_name":"graphics","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":14197404676,"package_name":"grDevices","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":14197404980,"package_name":"stats","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false}]}],"score":null,"created_at":"2025-09-04T15:50:08.316Z","updated_at":"2025-10-07T08:04:47.439Z","avatar_url":"https://github.com/xieguigang.png","language":"Visual Basic .NET","category":null,"sub_category":null,"monthly_downloads":0,"funding_links":[],"readme_doi_urls":["https://doi.org/10.5281/zenodo.4456618","https://doi.org/10.1371/journal.pcbi.1003123","https://doi.org/10.1093/nar/27.1.29","https://doi.org/10.1038/nmeth.3393","https://doi.org/10.1038/s41592-021-01331-z","https://doi.org/10.1186/1471-2105-8-105"],"works":{},"citation_counts":{},"total_citations":0,"keywords_from_contributors":[],"project_url":"https://science.ecosyste.ms/api/v1/projects/3552","html_url":"https://science.ecosyste.ms/projects/3552"}