{"id":36051,"name":"oncoanalyser-dev","description":null,"url":"https://github.com/scwatts/oncoanalyser-dev","last_synced_at":"2025-09-05T06:59:58.444Z","repository":{"id":280908898,"uuid":"942370089","full_name":"scwatts/oncoanalyser-dev","owner":"scwatts","description":null,"archived":false,"fork":false,"pushed_at":"2025-05-18T23:59:56.000Z","size":5390,"stargazers_count":0,"open_issues_count":0,"forks_count":0,"subscribers_count":1,"default_branch":"testing","last_synced_at":"2025-05-19T00:23:51.041Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":null,"language":"Nextflow","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"mit","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/scwatts.png","metadata":{"files":{"readme":"README.md","changelog":"CHANGELOG.md","contributing":".github/CONTRIBUTING.md","funding":null,"license":"LICENSE","code_of_conduct":"CODE_OF_CONDUCT.md","threat_model":null,"audit":null,"citation":"CITATIONS.md","codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null}},"created_at":"2025-03-04T02:18:33.000Z","updated_at":"2025-03-31T01:08:55.000Z","dependencies_parsed_at":"2025-04-30T05:37:52.088Z","dependency_job_id":null,"html_url":"https://github.com/scwatts/oncoanalyser-dev","commit_stats":null,"previous_names":["scwatts/oncoanalyser-testing","scwatts/oncoanalyser-dev"],"tags_count":0,"template":false,"template_full_name":null,"purl":"pkg:github/scwatts/oncoanalyser-dev","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/scwatts%2Foncoanalyser-dev","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/scwatts%2Foncoanalyser-dev/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/scwatts%2Foncoanalyser-dev/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/scwatts%2Foncoanalyser-dev/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/scwatts","download_url":"https://codeload.github.com/scwatts/oncoanalyser-dev/tar.gz/refs/heads/testing","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/scwatts%2Foncoanalyser-dev/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":273723200,"owners_count":25156304,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-09-05T02:00:09.113Z","response_time":402,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"owner":{"login":"scwatts","name":"Stephen Watts","uuid":"463926","kind":"user","description":"","email":"","website":"https://stephen.ac","location":null,"twitter":null,"company":null,"icon_url":"https://avatars.githubusercontent.com/u/463926?v=4","repositories_count":55,"last_synced_at":"2023-08-02T06:10:15.775Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/scwatts","funding_links":[],"total_stars":null,"followers":null,"following":null,"created_at":"2022-11-05T19:16:26.157Z","updated_at":"2023-08-02T06:10:16.245Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/scwatts","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/scwatts/repositories"},"packages":[],"commits":{"message":"Repository syncing started."},"issues_stats":{"full_name":"scwatts/oncoanalyser-dev","html_url":"https://github.com/scwatts/oncoanalyser-dev","last_synced_at":null,"status":null,"issues_count":null,"pull_requests_count":null,"avg_time_to_close_issue":null,"avg_time_to_close_pull_request":null,"issues_closed_count":null,"pull_requests_closed_count":null,"pull_request_authors_count":null,"issue_authors_count":null,"avg_comments_per_issue":null,"avg_comments_per_pull_request":null,"merged_pull_requests_count":null,"bot_issues_count":null,"bot_pull_requests_count":null,"past_year_issues_count":null,"past_year_pull_requests_count":null,"past_year_avg_time_to_close_issue":null,"past_year_avg_time_to_close_pull_request":null,"past_year_issues_closed_count":null,"past_year_pull_requests_closed_count":null,"past_year_pull_request_authors_count":null,"past_year_issue_authors_count":null,"past_year_avg_comments_per_issue":null,"past_year_avg_comments_per_pull_request":null,"past_year_bot_issues_count":null,"past_year_bot_pull_requests_count":null,"past_year_merged_pull_requests_count":null,"created_at":"2025-09-05T06:59:08.153Z","updated_at":"2025-09-05T06:59:08.153Z","repository_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/scwatts%2Foncoanalyser-dev","issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/scwatts%2Foncoanalyser-dev/issues","issue_labels_count":{},"pull_request_labels_count":{},"issue_author_associations_count":{},"pull_request_author_associations_count":{},"issue_authors":{},"pull_request_authors":{},"host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-05T00:00:10.444Z","repositories_count":10087320,"issues_count":31306968,"pull_requests_count":96469683,"authors_count":10696025,"icon_url":"https://github.com/github.png","host_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories","owners_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/owners","authors_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors"},"past_year_issue_labels_count":{},"past_year_pull_request_labels_count":{},"past_year_issue_author_associations_count":{},"past_year_pull_request_author_associations_count":{},"past_year_issue_authors":{},"past_year_pull_request_authors":{},"maintainers":[],"active_maintainers":[]},"events":{"total":{"PushEvent":18,"CreateEvent":4},"last_year":{"PushEvent":18,"CreateEvent":4}},"keywords":[],"dependencies":[{"ecosystem":"actions","filepath":".github/workflows/awsfulltest.yml","sha":null,"kind":"manifest","created_at":"2025-03-06T00:38:34.378Z","updated_at":"2025-03-06T00:38:34.378Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/.github/workflows/awsfulltest.yml","dependencies":[{"id":22145110262,"package_name":"octokit/request-action","ecosystem":"actions","requirements":"v2.x","direct":true,"kind":"composite","optional":false},{"id":22145113054,"package_name":"seqeralabs/action-tower-launch","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":22145116693,"package_name":"actions/upload-artifact","ecosystem":"actions","requirements":"v4","direct":true,"kind":"composite","optional":false}]},{"ecosystem":"actions","filepath":".github/workflows/awstest.yml","sha":null,"kind":"manifest","created_at":"2025-03-06T00:38:38.305Z","updated_at":"2025-03-06T00:38:38.305Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/.github/workflows/awstest.yml","dependencies":[{"id":22145117394,"package_name":"seqeralabs/action-tower-launch","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":22145117395,"package_name":"actions/upload-artifact","ecosystem":"actions","requirements":"v4","direct":true,"kind":"composite","optional":false}]},{"ecosystem":"actions","filepath":".github/workflows/branch.yml","sha":null,"kind":"manifest","created_at":"2025-03-06T00:38:38.388Z","updated_at":"2025-03-06T00:38:38.388Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/.github/workflows/branch.yml","dependencies":[{"id":22145117512,"package_name":"mshick/add-pr-comment","ecosystem":"actions","requirements":"b8f338c590a895d50bcbfa6c5859251edc8952fc","direct":true,"kind":"composite","optional":false}]},{"ecosystem":"actions","filepath":".github/workflows/ci.yml","sha":null,"kind":"manifest","created_at":"2025-03-06T00:38:40.475Z","updated_at":"2025-03-06T00:38:40.475Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/.github/workflows/ci.yml","dependencies":[{"id":22145122670,"package_name":"actions/checkout","ecosystem":"actions","requirements":"0ad4b8fadaa221de15dcec353f45205ec38ea70b","direct":true,"kind":"composite","optional":false},{"id":22145122671,"package_name":"nf-core/setup-nextflow","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":22145129631,"package_name":"eWaterCycle/setup-apptainer","ecosystem":"actions","requirements":"main","direct":true,"kind":"composite","optional":false},{"id":22145131920,"package_name":"conda-incubator/setup-miniconda","ecosystem":"actions","requirements":"a4260408e20b96e80095f42ff7f1a15b27dd94ca","direct":true,"kind":"composite","optional":false},{"id":22145131921,"package_name":"jlumbroso/free-disk-space","ecosystem":"actions","requirements":"54081f138730dfa15788a46383842cd2f914a1be","direct":true,"kind":"composite","optional":false}]},{"ecosystem":"actions","filepath":".github/workflows/clean-up.yml","sha":null,"kind":"manifest","created_at":"2025-03-06T00:38:45.278Z","updated_at":"2025-03-06T00:38:45.278Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/.github/workflows/clean-up.yml","dependencies":[{"id":22145131970,"package_name":"actions/stale","ecosystem":"actions","requirements":"28ca1036281a5e5922ead5184a1bbf96e5fc984e","direct":true,"kind":"composite","optional":false}]},{"ecosystem":"actions","filepath":".github/workflows/download_pipeline.yml","sha":null,"kind":"manifest","created_at":"2025-03-06T00:38:45.444Z","updated_at":"2025-03-06T00:38:45.444Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/.github/workflows/download_pipeline.yml","dependencies":[{"id":22145132021,"package_name":"nf-core/setup-nextflow","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":22145132022,"package_name":"jlumbroso/free-disk-space","ecosystem":"actions","requirements":"54081f138730dfa15788a46383842cd2f914a1be","direct":true,"kind":"composite","optional":false},{"id":22145132023,"package_name":"actions/setup-python","ecosystem":"actions","requirements":"82c7e631bb3cdc910f68e0081d67478d79c6982d","direct":true,"kind":"composite","optional":false},{"id":22145132024,"package_name":"eWaterCycle/setup-apptainer","ecosystem":"actions","requirements":"4bb22c52d4f63406c49e94c804632975787312b3","direct":true,"kind":"composite","optional":false}]},{"ecosystem":"actions","filepath":".github/workflows/fix-linting.yml","sha":null,"kind":"manifest","created_at":"2025-03-06T00:38:45.803Z","updated_at":"2025-03-06T00:38:45.803Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/.github/workflows/fix-linting.yml","dependencies":[{"id":22145132419,"package_name":"actions/checkout","ecosystem":"actions","requirements":"0ad4b8fadaa221de15dcec353f45205ec38ea70b","direct":true,"kind":"composite","optional":false},{"id":22145132420,"package_name":"peter-evans/create-or-update-comment","ecosystem":"actions","requirements":"71345be0265236311c031f5c7866368bd1eff043","direct":true,"kind":"composite","optional":false},{"id":22145132892,"package_name":"actions/setup-python","ecosystem":"actions","requirements":"82c7e631bb3cdc910f68e0081d67478d79c6982d","direct":true,"kind":"composite","optional":false}]},{"ecosystem":"actions","filepath":".github/workflows/linting.yml","sha":null,"kind":"manifest","created_at":"2025-03-06T00:38:47.672Z","updated_at":"2025-03-06T00:38:47.672Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/.github/workflows/linting.yml","dependencies":[{"id":22145132933,"package_name":"actions/checkout","ecosystem":"actions","requirements":"0ad4b8fadaa221de15dcec353f45205ec38ea70b","direct":true,"kind":"composite","optional":false},{"id":22145132934,"package_name":"actions/setup-python","ecosystem":"actions","requirements":"82c7e631bb3cdc910f68e0081d67478d79c6982d","direct":true,"kind":"composite","optional":false},{"id":22145132935,"package_name":"nf-core/setup-nextflow","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":22145132936,"package_name":"pietrobolcato/action-read-yaml","ecosystem":"actions","requirements":"1.1.0","direct":true,"kind":"composite","optional":false},{"id":22145133553,"package_name":"actions/upload-artifact","ecosystem":"actions","requirements":"65462800fd760344b1a7b4382951275a0abb4808","direct":true,"kind":"composite","optional":false}]},{"ecosystem":"actions","filepath":".github/workflows/linting_comment.yml","sha":null,"kind":"manifest","created_at":"2025-03-06T00:38:49.380Z","updated_at":"2025-03-06T00:38:49.380Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/.github/workflows/linting_comment.yml","dependencies":[{"id":22145133610,"package_name":"dawidd6/action-download-artifact","ecosystem":"actions","requirements":"bf251b5aa9c2f7eeb574a96ee720e24f801b7c11","direct":true,"kind":"composite","optional":false},{"id":22145133611,"package_name":"marocchino/sticky-pull-request-comment","ecosystem":"actions","requirements":"331f8f5b4215f0445d3c07b4967662a32a2d3e31","direct":true,"kind":"composite","optional":false}]},{"ecosystem":"actions","filepath":".github/workflows/release-announcements.yml","sha":null,"kind":"manifest","created_at":"2025-03-06T00:38:49.476Z","updated_at":"2025-03-06T00:38:49.476Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/.github/workflows/release-announcements.yml","dependencies":[{"id":22145133649,"package_name":"rzr/fediverse-action","ecosystem":"actions","requirements":"master","direct":true,"kind":"composite","optional":false},{"id":22145134003,"package_name":"actions/setup-python","ecosystem":"actions","requirements":"82c7e631bb3cdc910f68e0081d67478d79c6982d","direct":true,"kind":"composite","optional":false},{"id":22145134004,"package_name":"zentered/bluesky-post-action","ecosystem":"actions","requirements":"80dbe0a7697de18c15ad22f4619919ceb5ccf597","direct":true,"kind":"composite","optional":false}]},{"ecosystem":"actions","filepath":".github/workflows/template_version_comment.yml","sha":null,"kind":"manifest","created_at":"2025-03-06T00:38:52.601Z","updated_at":"2025-03-06T00:38:52.601Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/.github/workflows/template_version_comment.yml","dependencies":[{"id":22145134762,"package_name":"actions/checkout","ecosystem":"actions","requirements":"0ad4b8fadaa221de15dcec353f45205ec38ea70b","direct":true,"kind":"composite","optional":false},{"id":22145134763,"package_name":"nichmor/minimal-read-yaml","ecosystem":"actions","requirements":"v0.0.2","direct":true,"kind":"composite","optional":false},{"id":22145134906,"package_name":"mshick/add-pr-comment","ecosystem":"actions","requirements":"b8f338c590a895d50bcbfa6c5859251edc8952fc","direct":true,"kind":"composite","optional":false}]},{"ecosystem":"cpan","filepath":"modules/local/amber/meta.yml","sha":null,"kind":"manifest","created_at":"2025-03-06T00:39:22.068Z","updated_at":"2025-03-06T00:39:22.068Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/amber/meta.yml","dependencies":[]},{"ecosystem":"cpan","filepath":"modules/local/bamtools/meta.yml","sha":null,"kind":"manifest","created_at":"2025-03-06T00:39:22.357Z","updated_at":"2025-03-06T00:39:22.357Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/bamtools/meta.yml","dependencies":[]},{"ecosystem":"cpan","filepath":"modules/local/bwa-mem2/mem/meta.yml","sha":null,"kind":"manifest","created_at":"2025-03-06T00:39:22.582Z","updated_at":"2025-03-06T00:39:22.582Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/bwa-mem2/mem/meta.yml","dependencies":[]},{"ecosystem":"cpan","filepath":"modules/local/chord/meta.yml","sha":null,"kind":"manifest","created_at":"2025-03-06T00:39:23.099Z","updated_at":"2025-03-06T00:39:23.099Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/chord/meta.yml","dependencies":[]},{"ecosystem":"cpan","filepath":"modules/local/cobalt/meta.yml","sha":null,"kind":"manifest","created_at":"2025-03-06T00:39:23.400Z","updated_at":"2025-03-06T00:39:23.400Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/cobalt/meta.yml","dependencies":[]},{"ecosystem":"cpan","filepath":"modules/local/cuppa/meta.yml","sha":null,"kind":"manifest","created_at":"2025-03-06T00:39:23.652Z","updated_at":"2025-03-06T00:39:23.652Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/cuppa/meta.yml","dependencies":[]},{"ecosystem":"cpan","filepath":"modules/local/esvee/assemble/meta.yml","sha":null,"kind":"manifest","created_at":"2025-03-06T00:39:23.900Z","updated_at":"2025-03-06T00:39:23.900Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/esvee/assemble/meta.yml","dependencies":[]},{"ecosystem":"cpan","filepath":"modules/local/esvee/call/meta.yml","sha":null,"kind":"manifest","created_at":"2025-03-06T00:39:24.079Z","updated_at":"2025-03-06T00:39:24.079Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/esvee/call/meta.yml","dependencies":[]},{"ecosystem":"cpan","filepath":"modules/local/esvee/depth_annotator/meta.yml","sha":null,"kind":"manifest","created_at":"2025-03-06T00:39:24.258Z","updated_at":"2025-03-06T00:39:24.258Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/esvee/depth_annotator/meta.yml","dependencies":[]},{"ecosystem":"cpan","filepath":"modules/local/esvee/prep/meta.yml","sha":null,"kind":"manifest","created_at":"2025-03-06T00:39:24.481Z","updated_at":"2025-03-06T00:39:24.481Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/esvee/prep/meta.yml","dependencies":[]},{"ecosystem":"cpan","filepath":"modules/local/fastp/meta.yml","sha":null,"kind":"manifest","created_at":"2025-03-06T00:39:24.559Z","updated_at":"2025-03-06T00:39:24.559Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/fastp/meta.yml","dependencies":[]},{"ecosystem":"cpan","filepath":"modules/local/gatk4/bwaindeximage/meta.yml","sha":null,"kind":"manifest","created_at":"2025-03-06T00:39:24.746Z","updated_at":"2025-03-06T00:39:24.746Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/gatk4/bwaindeximage/meta.yml","dependencies":[]},{"ecosystem":"cpan","filepath":"modules/local/gridss/index/meta.yml","sha":null,"kind":"manifest","created_at":"2025-03-06T00:39:25.056Z","updated_at":"2025-03-06T00:39:25.056Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/gridss/index/meta.yml","dependencies":[]},{"ecosystem":"cpan","filepath":"modules/local/isofox/meta.yml","sha":null,"kind":"manifest","created_at":"2025-03-06T00:39:25.193Z","updated_at":"2025-03-06T00:39:25.193Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/isofox/meta.yml","dependencies":[]},{"ecosystem":"cpan","filepath":"modules/local/lilac/meta.yml","sha":null,"kind":"manifest","created_at":"2025-03-06T00:39:25.487Z","updated_at":"2025-03-06T00:39:25.487Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/lilac/meta.yml","dependencies":[]},{"ecosystem":"cpan","filepath":"modules/local/linx/germline/meta.yml","sha":null,"kind":"manifest","created_at":"2025-03-06T00:39:25.549Z","updated_at":"2025-03-06T00:39:25.549Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/linx/germline/meta.yml","dependencies":[]},{"ecosystem":"cpan","filepath":"modules/local/linx/somatic/meta.yml","sha":null,"kind":"manifest","created_at":"2025-03-06T00:39:25.759Z","updated_at":"2025-03-06T00:39:25.759Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/linx/somatic/meta.yml","dependencies":[]},{"ecosystem":"cpan","filepath":"modules/local/linx/visualiser/meta.yml","sha":null,"kind":"manifest","created_at":"2025-03-06T00:39:25.960Z","updated_at":"2025-03-06T00:39:25.960Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/linx/visualiser/meta.yml","dependencies":[]},{"ecosystem":"cpan","filepath":"modules/local/linxreport/meta.yml","sha":null,"kind":"manifest","created_at":"2025-03-06T00:39:26.166Z","updated_at":"2025-03-06T00:39:26.166Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/linxreport/meta.yml","dependencies":[]},{"ecosystem":"cpan","filepath":"modules/local/neo/annotate_fusions/meta.yml","sha":null,"kind":"manifest","created_at":"2025-03-06T00:39:26.433Z","updated_at":"2025-03-06T00:39:26.433Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/neo/annotate_fusions/meta.yml","dependencies":[]},{"ecosystem":"cpan","filepath":"modules/local/neo/finder/meta.yml","sha":null,"kind":"manifest","created_at":"2025-03-06T00:39:26.683Z","updated_at":"2025-03-06T00:39:26.683Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/neo/finder/meta.yml","dependencies":[]},{"ecosystem":"cpan","filepath":"modules/local/neo/scorer/meta.yml","sha":null,"kind":"manifest","created_at":"2025-03-06T00:39:27.123Z","updated_at":"2025-03-06T00:39:27.123Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/neo/scorer/meta.yml","dependencies":[]},{"ecosystem":"cpan","filepath":"modules/local/orange/meta.yml","sha":null,"kind":"manifest","created_at":"2025-03-06T00:39:27.335Z","updated_at":"2025-03-06T00:39:27.335Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/orange/meta.yml","dependencies":[]},{"ecosystem":"cpan","filepath":"modules/local/pave/germline/meta.yml","sha":null,"kind":"manifest","created_at":"2025-03-06T00:39:27.528Z","updated_at":"2025-03-06T00:39:27.528Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/pave/germline/meta.yml","dependencies":[]},{"ecosystem":"cpan","filepath":"modules/local/pave/somatic/meta.yml","sha":null,"kind":"manifest","created_at":"2025-03-06T00:39:27.728Z","updated_at":"2025-03-06T00:39:27.728Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/pave/somatic/meta.yml","dependencies":[]},{"ecosystem":"cpan","filepath":"modules/local/purple/meta.yml","sha":null,"kind":"manifest","created_at":"2025-03-06T00:39:27.993Z","updated_at":"2025-03-06T00:39:27.993Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/purple/meta.yml","dependencies":[]},{"ecosystem":"cpan","filepath":"modules/local/redux/meta.yml","sha":null,"kind":"manifest","created_at":"2025-03-06T00:39:28.272Z","updated_at":"2025-03-06T00:39:28.272Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/redux/meta.yml","dependencies":[]},{"ecosystem":"cpan","filepath":"modules/local/sage/append/meta.yml","sha":null,"kind":"manifest","created_at":"2025-03-06T00:39:28.450Z","updated_at":"2025-03-06T00:39:28.450Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/sage/append/meta.yml","dependencies":[]},{"ecosystem":"cpan","filepath":"modules/local/sage/germline/meta.yml","sha":null,"kind":"manifest","created_at":"2025-03-06T00:39:28.711Z","updated_at":"2025-03-06T00:39:28.711Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/sage/germline/meta.yml","dependencies":[]},{"ecosystem":"cpan","filepath":"modules/local/sage/somatic/meta.yml","sha":null,"kind":"manifest","created_at":"2025-03-06T00:39:28.787Z","updated_at":"2025-03-06T00:39:28.787Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/sage/somatic/meta.yml","dependencies":[]},{"ecosystem":"cpan","filepath":"modules/local/sambamba/merge/meta.yml","sha":null,"kind":"manifest","created_at":"2025-03-06T00:39:28.966Z","updated_at":"2025-03-06T00:39:28.966Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/sambamba/merge/meta.yml","dependencies":[]},{"ecosystem":"cpan","filepath":"modules/local/sigs/meta.yml","sha":null,"kind":"manifest","created_at":"2025-03-06T00:39:29.271Z","updated_at":"2025-03-06T00:39:29.271Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/sigs/meta.yml","dependencies":[]},{"ecosystem":"cpan","filepath":"modules/local/star/align/meta.yml","sha":null,"kind":"manifest","created_at":"2025-03-06T00:39:29.322Z","updated_at":"2025-03-06T00:39:29.322Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/star/align/meta.yml","dependencies":[]},{"ecosystem":"cpan","filepath":"modules/local/virusbreakend/meta.yml","sha":null,"kind":"manifest","created_at":"2025-03-06T00:39:29.581Z","updated_at":"2025-03-06T00:39:29.581Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/virusbreakend/meta.yml","dependencies":[]},{"ecosystem":"cpan","filepath":"modules/local/virusinterpreter/meta.yml","sha":null,"kind":"manifest","created_at":"2025-03-06T00:39:29.696Z","updated_at":"2025-03-06T00:39:29.696Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/virusinterpreter/meta.yml","dependencies":[]},{"ecosystem":"cpan","filepath":"modules/nf-core/bwa/index/meta.yml","sha":null,"kind":"manifest","created_at":"2025-03-06T00:39:29.929Z","updated_at":"2025-03-06T00:39:29.929Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/nf-core/bwa/index/meta.yml","dependencies":[]},{"ecosystem":"cpan","filepath":"modules/nf-core/bwamem2/index/meta.yml","sha":null,"kind":"manifest","created_at":"2025-03-06T00:39:30.038Z","updated_at":"2025-03-06T00:39:30.038Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/nf-core/bwamem2/index/meta.yml","dependencies":[]},{"ecosystem":"cpan","filepath":"modules/nf-core/gatk4/markduplicates/meta.yml","sha":null,"kind":"manifest","created_at":"2025-03-06T00:39:30.420Z","updated_at":"2025-03-06T00:39:30.420Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/nf-core/gatk4/markduplicates/meta.yml","dependencies":[]},{"ecosystem":"cpan","filepath":"modules/nf-core/samtools/dict/meta.yml","sha":null,"kind":"manifest","created_at":"2025-03-06T00:39:30.751Z","updated_at":"2025-03-06T00:39:30.751Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/nf-core/samtools/dict/meta.yml","dependencies":[]},{"ecosystem":"cpan","filepath":"modules/nf-core/samtools/faidx/meta.yml","sha":null,"kind":"manifest","created_at":"2025-03-06T00:39:31.422Z","updated_at":"2025-03-06T00:39:31.422Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/nf-core/samtools/faidx/meta.yml","dependencies":[]},{"ecosystem":"cpan","filepath":"modules/nf-core/samtools/sort/meta.yml","sha":null,"kind":"manifest","created_at":"2025-03-06T00:39:31.631Z","updated_at":"2025-03-06T00:39:31.631Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/nf-core/samtools/sort/meta.yml","dependencies":[]},{"ecosystem":"cpan","filepath":"modules/nf-core/star/genomegenerate/meta.yml","sha":null,"kind":"manifest","created_at":"2025-03-06T00:39:31.750Z","updated_at":"2025-03-06T00:39:31.750Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/nf-core/star/genomegenerate/meta.yml","dependencies":[]},{"ecosystem":"cpan","filepath":"subworkflows/nf-core/utils_nextflow_pipeline/meta.yml","sha":null,"kind":"manifest","created_at":"2025-03-06T00:39:31.854Z","updated_at":"2025-03-06T00:39:31.854Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/subworkflows/nf-core/utils_nextflow_pipeline/meta.yml","dependencies":[]},{"ecosystem":"cpan","filepath":"subworkflows/nf-core/utils_nfcore_pipeline/meta.yml","sha":null,"kind":"manifest","created_at":"2025-03-06T00:39:32.054Z","updated_at":"2025-03-06T00:39:32.054Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/subworkflows/nf-core/utils_nfcore_pipeline/meta.yml","dependencies":[]},{"ecosystem":"cpan","filepath":"subworkflows/nf-core/utils_nfschema_plugin/meta.yml","sha":null,"kind":"manifest","created_at":"2025-03-06T00:39:32.338Z","updated_at":"2025-03-06T00:39:32.338Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/subworkflows/nf-core/utils_nfschema_plugin/meta.yml","dependencies":[]},{"ecosystem":"docker","filepath":"modules/local/virusbreakend/Dockerfile","sha":null,"kind":"manifest","created_at":"2025-03-06T00:39:32.809Z","updated_at":"2025-03-06T00:39:32.809Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/virusbreakend/Dockerfile","dependencies":[{"id":22145155956,"package_name":"continuumio/miniconda3","ecosystem":"docker","requirements":"23.5.2-0-alpine","direct":true,"kind":"build","optional":false},{"id":22145155957,"package_name":"quay.io/bioconda/base-glibc-busybox-bash","ecosystem":"docker","requirements":"2.1.0","direct":true,"kind":"build","optional":false}]},{"ecosystem":"pypi","filepath":"modules/local/amber/environment.yml","sha":null,"kind":"manifest","created_at":"2025-04-30T05:37:41.553Z","updated_at":"2025-04-30T05:37:41.553Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/amber/environment.yml","dependencies":[]},{"ecosystem":"pypi","filepath":"modules/local/bamtools/environment.yml","sha":null,"kind":"manifest","created_at":"2025-04-30T05:37:41.684Z","updated_at":"2025-04-30T05:37:41.684Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/bamtools/environment.yml","dependencies":[]},{"ecosystem":"pypi","filepath":"modules/local/bwa-mem2/mem/environment.yml","sha":null,"kind":"manifest","created_at":"2025-04-30T05:37:41.845Z","updated_at":"2025-04-30T05:37:41.845Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/bwa-mem2/mem/environment.yml","dependencies":[]},{"ecosystem":"pypi","filepath":"modules/local/chord/environment.yml","sha":null,"kind":"manifest","created_at":"2025-04-30T05:37:41.936Z","updated_at":"2025-04-30T05:37:41.936Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/chord/environment.yml","dependencies":[]},{"ecosystem":"pypi","filepath":"modules/local/cobalt/environment.yml","sha":null,"kind":"manifest","created_at":"2025-04-30T05:37:42.340Z","updated_at":"2025-04-30T05:37:42.340Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/cobalt/environment.yml","dependencies":[]},{"ecosystem":"pypi","filepath":"modules/local/cuppa/environment.yml","sha":null,"kind":"manifest","created_at":"2025-04-30T05:37:42.472Z","updated_at":"2025-04-30T05:37:42.472Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/cuppa/environment.yml","dependencies":[]},{"ecosystem":"pypi","filepath":"modules/local/esvee/assemble/environment.yml","sha":null,"kind":"manifest","created_at":"2025-04-30T05:37:42.597Z","updated_at":"2025-04-30T05:37:42.597Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/esvee/assemble/environment.yml","dependencies":[]},{"ecosystem":"pypi","filepath":"modules/local/esvee/call/environment.yml","sha":null,"kind":"manifest","created_at":"2025-04-30T05:37:42.834Z","updated_at":"2025-04-30T05:37:42.834Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/esvee/call/environment.yml","dependencies":[]},{"ecosystem":"pypi","filepath":"modules/local/esvee/depth_annotator/environment.yml","sha":null,"kind":"manifest","created_at":"2025-04-30T05:37:42.985Z","updated_at":"2025-04-30T05:37:42.985Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/esvee/depth_annotator/environment.yml","dependencies":[]},{"ecosystem":"pypi","filepath":"modules/local/esvee/prep/environment.yml","sha":null,"kind":"manifest","created_at":"2025-04-30T05:37:43.073Z","updated_at":"2025-04-30T05:37:43.073Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/esvee/prep/environment.yml","dependencies":[]},{"ecosystem":"pypi","filepath":"modules/local/fastp/environment.yml","sha":null,"kind":"manifest","created_at":"2025-04-30T05:37:43.193Z","updated_at":"2025-04-30T05:37:43.193Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/fastp/environment.yml","dependencies":[]},{"ecosystem":"pypi","filepath":"modules/local/gridss/index/environment.yml","sha":null,"kind":"manifest","created_at":"2025-04-30T05:37:43.245Z","updated_at":"2025-04-30T05:37:43.245Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/gridss/index/environment.yml","dependencies":[]},{"ecosystem":"pypi","filepath":"modules/local/isofox/environment.yml","sha":null,"kind":"manifest","created_at":"2025-04-30T05:37:43.305Z","updated_at":"2025-04-30T05:37:43.305Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/isofox/environment.yml","dependencies":[]},{"ecosystem":"pypi","filepath":"modules/local/lilac/environment.yml","sha":null,"kind":"manifest","created_at":"2025-04-30T05:37:43.351Z","updated_at":"2025-04-30T05:37:43.351Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/lilac/environment.yml","dependencies":[]},{"ecosystem":"pypi","filepath":"modules/local/linx/germline/environment.yml","sha":null,"kind":"manifest","created_at":"2025-04-30T05:37:43.408Z","updated_at":"2025-04-30T05:37:43.408Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/linx/germline/environment.yml","dependencies":[]},{"ecosystem":"pypi","filepath":"modules/local/linx/somatic/environment.yml","sha":null,"kind":"manifest","created_at":"2025-04-30T05:37:43.550Z","updated_at":"2025-04-30T05:37:43.550Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/linx/somatic/environment.yml","dependencies":[]},{"ecosystem":"pypi","filepath":"modules/local/linx/visualiser/environment.yml","sha":null,"kind":"manifest","created_at":"2025-04-30T05:37:43.598Z","updated_at":"2025-04-30T05:37:43.598Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/linx/visualiser/environment.yml","dependencies":[]},{"ecosystem":"pypi","filepath":"modules/local/linxreport/environment.yml","sha":null,"kind":"manifest","created_at":"2025-04-30T05:37:44.061Z","updated_at":"2025-04-30T05:37:44.061Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/linxreport/environment.yml","dependencies":[]},{"ecosystem":"pypi","filepath":"modules/local/neo/annotate_fusions/environment.yml","sha":null,"kind":"manifest","created_at":"2025-04-30T05:37:44.222Z","updated_at":"2025-04-30T05:37:44.222Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/neo/annotate_fusions/environment.yml","dependencies":[]},{"ecosystem":"pypi","filepath":"modules/local/neo/finder/environment.yml","sha":null,"kind":"manifest","created_at":"2025-04-30T05:37:44.354Z","updated_at":"2025-04-30T05:37:44.354Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/neo/finder/environment.yml","dependencies":[]},{"ecosystem":"pypi","filepath":"modules/local/neo/scorer/environment.yml","sha":null,"kind":"manifest","created_at":"2025-04-30T05:37:44.400Z","updated_at":"2025-04-30T05:37:44.400Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/neo/scorer/environment.yml","dependencies":[]},{"ecosystem":"pypi","filepath":"modules/local/orange/environment.yml","sha":null,"kind":"manifest","created_at":"2025-04-30T05:37:44.453Z","updated_at":"2025-04-30T05:37:44.453Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/orange/environment.yml","dependencies":[]},{"ecosystem":"pypi","filepath":"modules/local/pave/germline/environment.yml","sha":null,"kind":"manifest","created_at":"2025-04-30T05:37:44.517Z","updated_at":"2025-04-30T05:37:44.517Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/pave/germline/environment.yml","dependencies":[]},{"ecosystem":"pypi","filepath":"modules/local/pave/somatic/environment.yml","sha":null,"kind":"manifest","created_at":"2025-04-30T05:37:44.609Z","updated_at":"2025-04-30T05:37:44.609Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/pave/somatic/environment.yml","dependencies":[]},{"ecosystem":"pypi","filepath":"modules/local/purple/environment.yml","sha":null,"kind":"manifest","created_at":"2025-04-30T05:37:44.658Z","updated_at":"2025-04-30T05:37:44.658Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/purple/environment.yml","dependencies":[]},{"ecosystem":"pypi","filepath":"modules/local/redux/environment.yml","sha":null,"kind":"manifest","created_at":"2025-04-30T05:37:45.023Z","updated_at":"2025-04-30T05:37:45.023Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/redux/environment.yml","dependencies":[]},{"ecosystem":"pypi","filepath":"modules/local/sage/append/environment.yml","sha":null,"kind":"manifest","created_at":"2025-04-30T05:37:45.145Z","updated_at":"2025-04-30T05:37:45.145Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/sage/append/environment.yml","dependencies":[]},{"ecosystem":"pypi","filepath":"modules/local/sage/germline/environment.yml","sha":null,"kind":"manifest","created_at":"2025-04-30T05:37:45.212Z","updated_at":"2025-04-30T05:37:45.212Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/sage/germline/environment.yml","dependencies":[]},{"ecosystem":"pypi","filepath":"modules/local/sage/somatic/environment.yml","sha":null,"kind":"manifest","created_at":"2025-04-30T05:37:45.333Z","updated_at":"2025-04-30T05:37:45.333Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/sage/somatic/environment.yml","dependencies":[]},{"ecosystem":"pypi","filepath":"modules/local/sambamba/merge/environment.yml","sha":null,"kind":"manifest","created_at":"2025-04-30T05:37:45.770Z","updated_at":"2025-04-30T05:37:45.770Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/sambamba/merge/environment.yml","dependencies":[]},{"ecosystem":"pypi","filepath":"modules/local/sigs/environment.yml","sha":null,"kind":"manifest","created_at":"2025-04-30T05:37:46.044Z","updated_at":"2025-04-30T05:37:46.044Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/sigs/environment.yml","dependencies":[]},{"ecosystem":"pypi","filepath":"modules/local/star/align/environment.yml","sha":null,"kind":"manifest","created_at":"2025-04-30T05:37:46.229Z","updated_at":"2025-04-30T05:37:46.229Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/star/align/environment.yml","dependencies":[]},{"ecosystem":"pypi","filepath":"modules/local/virusbreakend/environment.yml","sha":null,"kind":"manifest","created_at":"2025-04-30T05:37:46.484Z","updated_at":"2025-04-30T05:37:46.484Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/virusbreakend/environment.yml","dependencies":[]},{"ecosystem":"pypi","filepath":"modules/local/virusinterpreter/environment.yml","sha":null,"kind":"manifest","created_at":"2025-04-30T05:37:46.651Z","updated_at":"2025-04-30T05:37:46.651Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/local/virusinterpreter/environment.yml","dependencies":[]},{"ecosystem":"pypi","filepath":"modules/nf-core/bwa/index/environment.yml","sha":null,"kind":"manifest","created_at":"2025-04-30T05:37:46.792Z","updated_at":"2025-04-30T05:37:46.792Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/nf-core/bwa/index/environment.yml","dependencies":[]},{"ecosystem":"pypi","filepath":"modules/nf-core/bwamem2/index/environment.yml","sha":null,"kind":"manifest","created_at":"2025-04-30T05:37:46.857Z","updated_at":"2025-04-30T05:37:46.857Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/nf-core/bwamem2/index/environment.yml","dependencies":[]},{"ecosystem":"pypi","filepath":"modules/nf-core/star/genomegenerate/environment.yml","sha":null,"kind":"manifest","created_at":"2025-04-30T05:37:47.116Z","updated_at":"2025-04-30T05:37:47.116Z","repository_link":"https://github.com/scwatts/oncoanalyser-dev/blob/testing/modules/nf-core/star/genomegenerate/environment.yml","dependencies":[]}],"score":null,"created_at":"2025-09-04T15:51:09.587Z","updated_at":"2025-10-07T08:14:55.985Z","avatar_url":"https://github.com/scwatts.png","language":"Nextflow","category":null,"sub_category":null,"monthly_downloads":0,"funding_links":[],"readme_doi_urls":["https://doi.org/10.5281/zenodo.XXXXXXX","https://dx.doi.org/10.1038/s41587-020-0439-x"],"works":{},"citation_counts":{},"total_citations":0,"keywords_from_contributors":[],"project_url":"https://science.ecosyste.ms/api/v1/projects/36051","html_url":"https://science.ecosyste.ms/projects/36051","bibtex_url":"https://science.ecosyste.ms/projects/36051/export.bibtex","apalike_url":"https://science.ecosyste.ms/projects/36051/export.apalike"}