{"id":37528,"name":"align-cli","description":"A CLI for pairwise alignment of sequences, using both normal and mass based alignment.","url":"https://github.com/snijderlab/align-cli","last_synced_at":"2025-09-05T07:28:26.121Z","repository":{"id":173324857,"uuid":"647263013","full_name":"snijderlab/align-cli","owner":"snijderlab","description":"A CLI for pairwise alignment of sequences, using both normal and mass based alignment.","archived":false,"fork":false,"pushed_at":"2025-06-19T09:42:12.000Z","size":860,"stargazers_count":13,"open_issues_count":0,"forks_count":0,"subscribers_count":1,"default_branch":"main","last_synced_at":"2025-07-05T23:07:30.808Z","etag":null,"topics":["alignment","mass-spectrometry","protein","rust"],"latest_commit_sha":null,"homepage":"","language":"Rust","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"apache-2.0","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/snijderlab.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE-APACHE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":"CITATION.cff","codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null}},"created_at":"2023-05-30T12:06:05.000Z","updated_at":"2025-06-19T09:42:16.000Z","dependencies_parsed_at":"2023-12-22T15:58:42.636Z","dependency_job_id":"10619d6d-ea14-42b7-8069-752c7aee715b","html_url":"https://github.com/snijderlab/align-cli","commit_stats":null,"previous_names":["snijderlab/align-cli"],"tags_count":10,"template":false,"template_full_name":null,"purl":"pkg:github/snijderlab/align-cli","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/snijderlab%2Falign-cli","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/snijderlab%2Falign-cli/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/snijderlab%2Falign-cli/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/snijderlab%2Falign-cli/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/snijderlab","download_url":"https://codeload.github.com/snijderlab/align-cli/tar.gz/refs/heads/main","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/snijderlab%2Falign-cli/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":273726790,"owners_count":25157011,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-09-05T02:00:09.113Z","response_time":402,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"owner":{"login":"snijderlab","name":"snijderlab","uuid":"95350222","kind":"organization","description":"Research lab under @joostsnijder at the @UtrechtUniversity.","email":null,"website":null,"location":"Netherlands","twitter":null,"company":null,"icon_url":"https://avatars.githubusercontent.com/u/95350222?v=4","repositories_count":3,"last_synced_at":"2023-05-03T19:43:19.078Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/snijderlab","funding_links":[],"total_stars":null,"followers":null,"following":null,"created_at":"2023-05-03T19:43:19.085Z","updated_at":"2023-05-03T19:43:19.085Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/snijderlab","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/snijderlab/repositories"},"packages":[{"id":7826912,"name":"align-cli","ecosystem":"cargo","description":"A command line interface for easily aligning sequences.","homepage":null,"licenses":"MIT OR Apache-2.0","normalized_licenses":["MIT","Apache-2.0"],"repository_url":"https://github.com/snijderlab/align-cli","keywords_array":[],"namespace":null,"versions_count":10,"first_release_published_at":"2023-06-07T11:48:21.112Z","latest_release_published_at":"2025-04-11T12:47:20.734Z","latest_release_number":"0.4.1","last_synced_at":"2025-08-10T23:34:47.615Z","created_at":"2023-06-07T11:50:14.116Z","updated_at":"2025-08-10T23:34:47.615Z","registry_url":"https://crates.io/crates/align-cli/","install_command":"cargo install align-cli","documentation_url":"https://docs.rs/align-cli/","metadata":{"categories":[]},"repo_metadata":{"id":173324857,"uuid":"647263013","full_name":"snijderlab/align-cli","owner":"snijderlab","description":"A CLI for pairwise alignment of sequences, using both normal and mass based alignment.","archived":false,"fork":false,"pushed_at":"2024-06-27T09:54:40.000Z","size":913,"stargazers_count":9,"open_issues_count":0,"forks_count":0,"subscribers_count":1,"default_branch":"main","last_synced_at":"2024-06-27T11:16:05.239Z","etag":null,"topics":["alignment","mass-spectrometry","protein","rust"],"latest_commit_sha":null,"homepage":"","language":"Rust","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"apache-2.0","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/snijderlab.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE-APACHE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":"CITATION.cff","codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2023-05-30T12:06:05.000Z","updated_at":"2024-06-27T09:54:44.000Z","dependencies_parsed_at":"2023-12-22T15:58:42.636Z","dependency_job_id":"10619d6d-ea14-42b7-8069-752c7aee715b","html_url":"https://github.com/snijderlab/align-cli","commit_stats":null,"previous_names":["snijderlab/align-cli"],"tags_count":9,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/snijderlab%2Falign-cli","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/snijderlab%2Falign-cli/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/snijderlab%2Falign-cli/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/snijderlab%2Falign-cli/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/snijderlab","download_url":"https://codeload.github.com/snijderlab/align-cli/tar.gz/refs/heads/main","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":214524498,"owners_count":15746178,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"},"owner_record":{"login":"snijderlab","name":"snijderlab","uuid":"95350222","kind":"organization","description":"Research lab under @joostsnijder at the @UtrechtUniversity.","email":null,"website":null,"location":"Netherlands","twitter":null,"company":null,"icon_url":"https://avatars.githubusercontent.com/u/95350222?v=4","repositories_count":3,"last_synced_at":"2023-05-03T19:43:19.078Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/snijderlab","funding_links":[],"total_stars":null,"followers":null,"following":null,"created_at":"2023-05-03T19:43:19.085Z","updated_at":"2023-05-03T19:43:19.085Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/snijderlab","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/snijderlab/repositories"},"tags":[{"name":"v0.4.0","sha":"ce98530e813d169ad356da3afcbc3767267c0e0d","kind":"commit","published_at":"2024-02-16T13:22:28.000Z","download_url":"https://codeload.github.com/snijderlab/align-cli/tar.gz/v0.4.0","html_url":"https://github.com/snijderlab/align-cli/releases/tag/v0.4.0","dependencies_parsed_at":null,"dependency_job_id":null,"tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/snijderlab%2Falign-cli/tags/v0.4.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/snijderlab%2Falign-cli/tags/v0.4.0/manifests"},{"name":"v0.3.0","sha":"205ab9dfbd91a8a5da272b4529108331680bd835","kind":"commit","published_at":"2023-10-30T13:32:58.000Z","download_url":"https://codeload.github.com/snijderlab/align-cli/tar.gz/v0.3.0","html_url":"https://github.com/snijderlab/align-cli/releases/tag/v0.3.0","dependencies_parsed_at":null,"dependency_job_id":null,"tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/snijderlab%2Falign-cli/tags/v0.3.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/snijderlab%2Falign-cli/tags/v0.3.0/manifests"},{"name":"v0.2.5","sha":"f568de07e5442f5cc77f33bb2b5d6a233e2bd65a","kind":"commit","published_at":"2023-08-31T14:40:24.000Z","download_url":"https://codeload.github.com/snijderlab/align-cli/tar.gz/v0.2.5","html_url":"https://github.com/snijderlab/align-cli/releases/tag/v0.2.5","dependencies_parsed_at":null,"dependency_job_id":null,"tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/snijderlab%2Falign-cli/tags/v0.2.5","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/snijderlab%2Falign-cli/tags/v0.2.5/manifests"},{"name":"v0.2.4","sha":"cf29ab8ad907ce3a88eeaff27dccf220f92d3a57","kind":"commit","published_at":"2023-07-14T13:32:52.000Z","download_url":"https://codeload.github.com/snijderlab/align-cli/tar.gz/v0.2.4","html_url":"https://github.com/snijderlab/align-cli/releases/tag/v0.2.4","dependencies_parsed_at":null,"dependency_job_id":null,"tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/snijderlab%2Falign-cli/tags/v0.2.4","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/snijderlab%2Falign-cli/tags/v0.2.4/manifests"},{"name":"v0.2.3","sha":"ab84b87a7928b994abe6c7814a5d7a8bb51e4d52","kind":"commit","published_at":"2023-07-14T09:06:38.000Z","download_url":"https://codeload.github.com/snijderlab/align-cli/tar.gz/v0.2.3","html_url":"https://github.com/snijderlab/align-cli/releases/tag/v0.2.3","dependencies_parsed_at":null,"dependency_job_id":null,"tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/snijderlab%2Falign-cli/tags/v0.2.3","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/snijderlab%2Falign-cli/tags/v0.2.3/manifests"},{"name":"v0.2.2","sha":"fde7b6a83888a33238ea52c7ccbb0560e9100cf9","kind":"commit","published_at":"2023-06-27T09:36:37.000Z","download_url":"https://codeload.github.com/snijderlab/align-cli/tar.gz/v0.2.2","html_url":"https://github.com/snijderlab/align-cli/releases/tag/v0.2.2","dependencies_parsed_at":null,"dependency_job_id":null,"tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/snijderlab%2Falign-cli/tags/v0.2.2","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/snijderlab%2Falign-cli/tags/v0.2.2/manifests"},{"name":"v0.2.1","sha":"b6930bdd4d1b5ae57eeb66c62607674ee1c1adcb","kind":"commit","published_at":"2023-06-23T18:41:59.000Z","download_url":"https://codeload.github.com/snijderlab/align-cli/tar.gz/v0.2.1","html_url":"https://github.com/snijderlab/align-cli/releases/tag/v0.2.1","dependencies_parsed_at":null,"dependency_job_id":null,"tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/snijderlab%2Falign-cli/tags/v0.2.1","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/snijderlab%2Falign-cli/tags/v0.2.1/manifests"},{"name":"v0.2.0","sha":"9a3b4e5453d21bd229da0fb54dd8fd98c0d0955e","kind":"commit","published_at":"2023-06-08T09:18:47.000Z","download_url":"https://codeload.github.com/snijderlab/align-cli/tar.gz/v0.2.0","html_url":"https://github.com/snijderlab/align-cli/releases/tag/v0.2.0","dependencies_parsed_at":null,"dependency_job_id":null,"tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/snijderlab%2Falign-cli/tags/v0.2.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/snijderlab%2Falign-cli/tags/v0.2.0/manifests"},{"name":"v0.1.0","sha":"da9b13cdeacabf837ea114bede1583b73da46226","kind":"commit","published_at":"2023-06-07T11:47:38.000Z","download_url":"https://codeload.github.com/snijderlab/align-cli/tar.gz/v0.1.0","html_url":"https://github.com/snijderlab/align-cli/releases/tag/v0.1.0","dependencies_parsed_at":null,"dependency_job_id":null,"tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/snijderlab%2Falign-cli/tags/v0.1.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/snijderlab%2Falign-cli/tags/v0.1.0/manifests"}]},"repo_metadata_updated_at":"2024-08-08T15:13:00.993Z","dependent_packages_count":0,"downloads":11501,"downloads_period":"total","dependent_repos_count":0,"rankings":{"downloads":99.3137983780689,"dependent_repos_count":28.411596779432124,"dependent_packages_count":33.06550875273523,"stargazers_count":null,"forks_count":null,"docker_downloads_count":null,"average":53.596967970078744},"purl":"pkg:cargo/align-cli","advisories":[],"docker_usage_url":"https://docker.ecosyste.ms/usage/cargo/align-cli","docker_dependents_count":null,"docker_downloads_count":null,"usage_url":"https://repos.ecosyste.ms/usage/cargo/align-cli","dependent_repositories_url":"https://repos.ecosyste.ms/api/v1/usage/cargo/align-cli/dependencies","status":null,"funding_links":[],"critical":null,"issue_metadata":null,"versions_url":"https://packages.ecosyste.ms/api/v1/registries/crates.io/packages/align-cli/versions","version_numbers_url":"https://packages.ecosyste.ms/api/v1/registries/crates.io/packages/align-cli/version_numbers","dependent_packages_url":"https://packages.ecosyste.ms/api/v1/registries/crates.io/packages/align-cli/dependent_packages","related_packages_url":"https://packages.ecosyste.ms/api/v1/registries/crates.io/packages/align-cli/related_packages","maintainers":[{"uuid":"109821","login":"douweschulte","name":"Douwe Schulte","email":null,"url":"https://github.com/douweschulte","packages_count":3,"html_url":"https://crates.io/users/douweschulte","role":null,"created_at":"2023-06-07T11:54:42.609Z","updated_at":"2023-06-07T11:54:42.609Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/crates.io/maintainers/douweschulte/packages"}],"registry":{"name":"crates.io","url":"https://crates.io","ecosystem":"cargo","default":true,"packages_count":204430,"maintainers_count":50512,"namespaces_count":0,"keywords_count":51709,"github":"rust-lang","metadata":{"funded_packages_count":19895},"icon_url":"https://github.com/rust-lang.png","created_at":"2022-04-04T15:19:22.689Z","updated_at":"2025-09-05T05:43:40.882Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/crates.io/packages","maintainers_url":"https://packages.ecosyste.ms/api/v1/registries/crates.io/maintainers","namespaces_url":"https://packages.ecosyste.ms/api/v1/registries/crates.io/namespaces"}}],"commits":{"id":8639121,"full_name":"snijderlab/align-cli","default_branch":"main","committers":[{"name":"Douwe Schulte","email":"d.schulte@uu.nl","login":"douweschulte","count":118}],"total_commits":118,"total_committers":1,"total_bot_commits":0,"total_bot_committers":0,"mean_commits":118.0,"dds":0.0,"past_year_committers":[{"name":"Douwe Schulte","email":"d.schulte@uu.nl","login":"douweschulte","count":22}],"past_year_total_commits":22,"past_year_total_committers":1,"past_year_total_bot_commits":0,"past_year_total_bot_committers":0,"past_year_mean_commits":22.0,"past_year_dds":0.0,"last_synced_at":"2025-07-06T07:16:14.759Z","last_synced_commit":"9c6db820f84b15581509184d1f194786e105b5d2","created_at":"2025-02-06T23:28:31.531Z","updated_at":"2025-07-06T07:16:14.760Z","commits_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories/snijderlab%2Falign-cli/commits","host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-05T00:00:10.343Z","repositories_count":5480019,"commits_count":853389012,"contributors_count":31098138,"owners_count":906558,"icon_url":"https://github.com/github.png","host_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories"}},"issues_stats":{"full_name":"snijderlab/align-cli","html_url":"https://github.com/snijderlab/align-cli","last_synced_at":"2025-07-05T23:07:42.129Z","status":null,"issues_count":0,"pull_requests_count":0,"avg_time_to_close_issue":null,"avg_time_to_close_pull_request":null,"issues_closed_count":0,"pull_requests_closed_count":0,"pull_request_authors_count":0,"issue_authors_count":0,"avg_comments_per_issue":null,"avg_comments_per_pull_request":null,"merged_pull_requests_count":0,"bot_issues_count":0,"bot_pull_requests_count":0,"past_year_issues_count":0,"past_year_pull_requests_count":0,"past_year_avg_time_to_close_issue":null,"past_year_avg_time_to_close_pull_request":null,"past_year_issues_closed_count":0,"past_year_pull_requests_closed_count":0,"past_year_pull_request_authors_count":0,"past_year_issue_authors_count":0,"past_year_avg_comments_per_issue":null,"past_year_avg_comments_per_pull_request":null,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":0,"created_at":"2025-02-06T23:28:31.765Z","updated_at":"2025-07-05T23:07:42.130Z","repository_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/snijderlab%2Falign-cli","issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/snijderlab%2Falign-cli/issues","issue_labels_count":{},"pull_request_labels_count":{},"issue_author_associations_count":{},"pull_request_author_associations_count":{},"issue_authors":{},"pull_request_authors":{},"host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-05T00:00:10.444Z","repositories_count":10087320,"issues_count":31306968,"pull_requests_count":96469683,"authors_count":10696025,"icon_url":"https://github.com/github.png","host_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories","owners_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/owners","authors_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors"},"past_year_issue_labels_count":{},"past_year_pull_request_labels_count":{},"past_year_issue_author_associations_count":{},"past_year_pull_request_author_associations_count":{},"past_year_issue_authors":{},"past_year_pull_request_authors":{},"maintainers":[],"active_maintainers":[]},"events":{"total":{"ReleaseEvent":1,"WatchEvent":5,"DeleteEvent":1,"PushEvent":13,"CreateEvent":2},"last_year":{"ReleaseEvent":1,"WatchEvent":5,"DeleteEvent":1,"PushEvent":13,"CreateEvent":2}},"keywords":["alignment","mass-spectrometry","protein","rust"],"dependencies":[{"ecosystem":"actions","filepath":".github/workflows/rust.yml","sha":null,"kind":"manifest","created_at":"2023-12-22T15:58:42.456Z","updated_at":"2023-12-22T15:58:42.456Z","repository_link":"https://github.com/snijderlab/align-cli/blob/main/.github/workflows/rust.yml","dependencies":[{"id":15230411384,"package_name":"actions/checkout","ecosystem":"actions","requirements":"v4","direct":true,"kind":"composite","optional":false},{"id":15230411385,"package_name":"dtolnay/rust-toolchain","ecosystem":"actions","requirements":"stable","direct":true,"kind":"composite","optional":false},{"id":15230411386,"package_name":"softprops/action-gh-release","ecosystem":"actions","requirements":"v1","direct":true,"kind":"composite","optional":false},{"id":15230411387,"package_name":"actions/upload-artifact","ecosystem":"actions","requirements":"v4","direct":true,"kind":"composite","optional":false}]},{"ecosystem":"cargo","filepath":"Cargo.lock","sha":null,"kind":"lockfile","created_at":"2023-09-27T19:34:11.414Z","updated_at":"2023-09-27T19:34:11.414Z","repository_link":"https://github.com/snijderlab/align-cli/blob/main/Cargo.lock","dependencies":[{"id":13982992932,"package_name":"aho-corasick","ecosystem":"cargo","requirements":"1.1.1","direct":false,"kind":"runtime","optional":false},{"id":13982992933,"package_name":"anstream","ecosystem":"cargo","requirements":"0.5.0","direct":false,"kind":"runtime","optional":false},{"id":13982992934,"package_name":"anstyle","ecosystem":"cargo","requirements":"1.0.3","direct":false,"kind":"runtime","optional":false},{"id":13982992935,"package_name":"anstyle-parse","ecosystem":"cargo","requirements":"0.2.1","direct":false,"kind":"runtime","optional":false},{"id":13982992936,"package_name":"anstyle-query","ecosystem":"cargo","requirements":"1.0.0","direct":false,"kind":"runtime","optional":false},{"id":13982992937,"package_name":"anstyle-wincon","ecosystem":"cargo","requirements":"2.1.0","direct":false,"kind":"runtime","optional":false},{"id":13982992938,"package_name":"anyhow","ecosystem":"cargo","requirements":"1.0.75","direct":false,"kind":"runtime","optional":false},{"id":13982992939,"package_name":"approx","ecosystem":"cargo","requirements":"0.5.1","direct":false,"kind":"runtime","optional":false},{"id":13982992940,"package_name":"autocfg","ecosystem":"cargo","requirements":"1.1.0","direct":false,"kind":"runtime","optional":false},{"id":13982992941,"package_name":"bio","ecosystem":"cargo","requirements":"1.4.0","direct":false,"kind":"runtime","optional":false},{"id":13982992942,"package_name":"bio-types","ecosystem":"cargo","requirements":"1.0.1","direct":false,"kind":"runtime","optional":false},{"id":13982992943,"package_name":"bit-set","ecosystem":"cargo","requirements":"0.5.3","direct":false,"kind":"runtime","optional":false},{"id":13982992944,"package_name":"bit-vec","ecosystem":"cargo","requirements":"0.6.3","direct":false,"kind":"runtime","optional":false},{"id":13982992945,"package_name":"bitflags","ecosystem":"cargo","requirements":"2.4.0","direct":false,"kind":"runtime","optional":false},{"id":13982992946,"package_name":"bv","ecosystem":"cargo","requirements":"0.11.1","direct":false,"kind":"runtime","optional":false},{"id":13982992947,"package_name":"bytecount","ecosystem":"cargo","requirements":"0.6.3","direct":false,"kind":"runtime","optional":false},{"id":13982992948,"package_name":"bytemuck","ecosystem":"cargo","requirements":"1.14.0","direct":false,"kind":"runtime","optional":false},{"id":13982992949,"package_name":"byteorder","ecosystem":"cargo","requirements":"1.4.3","direct":false,"kind":"runtime","optional":false},{"id":13982992950,"package_name":"cc","ecosystem":"cargo","requirements":"1.0.83","direct":false,"kind":"runtime","optional":false},{"id":13982992951,"package_name":"cfg-if","ecosystem":"cargo","requirements":"1.0.0","direct":false,"kind":"runtime","optional":false},{"id":13982992952,"package_name":"clap","ecosystem":"cargo","requirements":"4.4.5","direct":false,"kind":"runtime","optional":false},{"id":13982992953,"package_name":"clap_builder","ecosystem":"cargo","requirements":"4.4.5","direct":false,"kind":"runtime","optional":false},{"id":13982992954,"package_name":"clap_derive","ecosystem":"cargo","requirements":"4.4.2","direct":false,"kind":"runtime","optional":false},{"id":13982992955,"package_name":"clap_lex","ecosystem":"cargo","requirements":"0.5.1","direct":false,"kind":"runtime","optional":false},{"id":13982992956,"package_name":"colorchoice","ecosystem":"cargo","requirements":"1.0.0","direct":false,"kind":"runtime","optional":false},{"id":13982992957,"package_name":"colored","ecosystem":"cargo","requirements":"2.0.4","direct":false,"kind":"runtime","optional":false},{"id":13982992958,"package_name":"csv","ecosystem":"cargo","requirements":"1.2.2","direct":false,"kind":"runtime","optional":false},{"id":13982992959,"package_name":"csv-core","ecosystem":"cargo","requirements":"0.1.10","direct":false,"kind":"runtime","optional":false},{"id":13982992960,"package_name":"custom_derive","ecosystem":"cargo","requirements":"0.1.7","direct":false,"kind":"runtime","optional":false},{"id":13982992961,"package_name":"derive-new","ecosystem":"cargo","requirements":"0.5.9","direct":false,"kind":"runtime","optional":false},{"id":13982992962,"package_name":"editdistancek","ecosystem":"cargo","requirements":"1.0.2","direct":false,"kind":"runtime","optional":false},{"id":13982992963,"package_name":"either","ecosystem":"cargo","requirements":"1.9.0","direct":false,"kind":"runtime","optional":false},{"id":13982992964,"package_name":"enum-map","ecosystem":"cargo","requirements":"1.1.1","direct":false,"kind":"runtime","optional":false},{"id":13982992965,"package_name":"enum-map-derive","ecosystem":"cargo","requirements":"0.6.0","direct":false,"kind":"runtime","optional":false},{"id":13982992966,"package_name":"equivalent","ecosystem":"cargo","requirements":"1.0.1","direct":false,"kind":"runtime","optional":false},{"id":13982992967,"package_name":"errno","ecosystem":"cargo","requirements":"0.3.3","direct":false,"kind":"runtime","optional":false},{"id":13982992968,"package_name":"errno-dragonfly","ecosystem":"cargo","requirements":"0.1.2","direct":false,"kind":"runtime","optional":false},{"id":13982992969,"package_name":"feature-probe","ecosystem":"cargo","requirements":"0.1.1","direct":false,"kind":"runtime","optional":false},{"id":13982992970,"package_name":"fixedbitset","ecosystem":"cargo","requirements":"0.4.2","direct":false,"kind":"runtime","optional":false},{"id":13982992971,"package_name":"fxhash","ecosystem":"cargo","requirements":"0.2.1","direct":false,"kind":"runtime","optional":false},{"id":13982992972,"package_name":"getrandom","ecosystem":"cargo","requirements":"0.2.10","direct":false,"kind":"runtime","optional":false},{"id":13982992973,"package_name":"getset","ecosystem":"cargo","requirements":"0.1.2","direct":false,"kind":"runtime","optional":false},{"id":13982992974,"package_name":"hashbrown","ecosystem":"cargo","requirements":"0.14.0","direct":false,"kind":"runtime","optional":false},{"id":13982992975,"package_name":"heck","ecosystem":"cargo","requirements":"0.4.1","direct":false,"kind":"runtime","optional":false},{"id":13982992976,"package_name":"hermit-abi","ecosystem":"cargo","requirements":"0.3.3","direct":false,"kind":"runtime","optional":false},{"id":13982992977,"package_name":"indexmap","ecosystem":"cargo","requirements":"2.0.0","direct":false,"kind":"runtime","optional":false},{"id":13982992978,"package_name":"is-terminal","ecosystem":"cargo","requirements":"0.4.9","direct":false,"kind":"runtime","optional":false},{"id":13982992979,"package_name":"itertools","ecosystem":"cargo","requirements":"0.11.0","direct":false,"kind":"runtime","optional":false},{"id":13982992980,"package_name":"itertools-num","ecosystem":"cargo","requirements":"0.1.3","direct":false,"kind":"runtime","optional":false},{"id":13982992981,"package_name":"itoa","ecosystem":"cargo","requirements":"1.0.9","direct":false,"kind":"runtime","optional":false},{"id":13982992982,"package_name":"lazy_static","ecosystem":"cargo","requirements":"1.4.0","direct":false,"kind":"runtime","optional":false},{"id":13982992983,"package_name":"libc","ecosystem":"cargo","requirements":"0.2.148","direct":false,"kind":"runtime","optional":false},{"id":13982992984,"package_name":"libm","ecosystem":"cargo","requirements":"0.2.7","direct":false,"kind":"runtime","optional":false},{"id":13982992985,"package_name":"linux-raw-sys","ecosystem":"cargo","requirements":"0.4.7","direct":false,"kind":"runtime","optional":false},{"id":13982992986,"package_name":"matrixmultiply","ecosystem":"cargo","requirements":"0.3.8","direct":false,"kind":"runtime","optional":false},{"id":13982992987,"package_name":"memchr","ecosystem":"cargo","requirements":"2.6.3","direct":false,"kind":"runtime","optional":false},{"id":13982992988,"package_name":"multimap","ecosystem":"cargo","requirements":"0.8.3","direct":false,"kind":"runtime","optional":false},{"id":13982992989,"package_name":"nalgebra","ecosystem":"cargo","requirements":"0.29.0","direct":false,"kind":"runtime","optional":false},{"id":13982992990,"package_name":"nalgebra-macros","ecosystem":"cargo","requirements":"0.1.0","direct":false,"kind":"runtime","optional":false},{"id":13982992991,"package_name":"ndarray","ecosystem":"cargo","requirements":"0.15.6","direct":false,"kind":"runtime","optional":false},{"id":13982992992,"package_name":"newtype_derive","ecosystem":"cargo","requirements":"0.1.6","direct":false,"kind":"runtime","optional":false},{"id":13982992993,"package_name":"num-complex","ecosystem":"cargo","requirements":"0.4.4","direct":false,"kind":"runtime","optional":false},{"id":13982992994,"package_name":"num-integer","ecosystem":"cargo","requirements":"0.1.45","direct":false,"kind":"runtime","optional":false},{"id":13982992995,"package_name":"num-rational","ecosystem":"cargo","requirements":"0.4.1","direct":false,"kind":"runtime","optional":false},{"id":13982992996,"package_name":"num-traits","ecosystem":"cargo","requirements":"0.2.16","direct":false,"kind":"runtime","optional":false},{"id":13982992997,"package_name":"ordered-float","ecosystem":"cargo","requirements":"3.9.1","direct":false,"kind":"runtime","optional":false},{"id":13982992998,"package_name":"paste","ecosystem":"cargo","requirements":"1.0.14","direct":false,"kind":"runtime","optional":false},{"id":13982992999,"package_name":"petgraph","ecosystem":"cargo","requirements":"0.6.4","direct":false,"kind":"runtime","optional":false},{"id":13982993000,"package_name":"ppv-lite86","ecosystem":"cargo","requirements":"0.2.17","direct":false,"kind":"runtime","optional":false},{"id":13982993001,"package_name":"proc-macro-error","ecosystem":"cargo","requirements":"1.0.4","direct":false,"kind":"runtime","optional":false},{"id":13982993002,"package_name":"proc-macro-error-attr","ecosystem":"cargo","requirements":"1.0.4","direct":false,"kind":"runtime","optional":false},{"id":13982993003,"package_name":"proc-macro2","ecosystem":"cargo","requirements":"1.0.67","direct":false,"kind":"runtime","optional":false},{"id":13982993004,"package_name":"quote","ecosystem":"cargo","requirements":"1.0.33","direct":false,"kind":"runtime","optional":false},{"id":13982993005,"package_name":"rand","ecosystem":"cargo","requirements":"0.8.5","direct":false,"kind":"runtime","optional":false},{"id":13982993006,"package_name":"rand_chacha","ecosystem":"cargo","requirements":"0.3.1","direct":false,"kind":"runtime","optional":false},{"id":13982993007,"package_name":"rand_core","ecosystem":"cargo","requirements":"0.6.4","direct":false,"kind":"runtime","optional":false},{"id":13982993008,"package_name":"rand_distr","ecosystem":"cargo","requirements":"0.4.3","direct":false,"kind":"runtime","optional":false},{"id":13982993009,"package_name":"rawpointer","ecosystem":"cargo","requirements":"0.2.1","direct":false,"kind":"runtime","optional":false},{"id":13982993010,"package_name":"regex","ecosystem":"cargo","requirements":"1.9.5","direct":false,"kind":"runtime","optional":false},{"id":13982993011,"package_name":"regex-automata","ecosystem":"cargo","requirements":"0.3.8","direct":false,"kind":"runtime","optional":false},{"id":13982993012,"package_name":"regex-syntax","ecosystem":"cargo","requirements":"0.7.5","direct":false,"kind":"runtime","optional":false},{"id":13982993013,"package_name":"rustc_version","ecosystem":"cargo","requirements":"0.1.7","direct":false,"kind":"runtime","optional":false},{"id":13982993014,"package_name":"rustix","ecosystem":"cargo","requirements":"0.38.14","direct":false,"kind":"runtime","optional":false},{"id":13982993015,"package_name":"rustversion","ecosystem":"cargo","requirements":"1.0.14","direct":false,"kind":"runtime","optional":false},{"id":13982993016,"package_name":"ryu","ecosystem":"cargo","requirements":"1.0.15","direct":false,"kind":"runtime","optional":false},{"id":13982993017,"package_name":"safe_arch","ecosystem":"cargo","requirements":"0.7.1","direct":false,"kind":"runtime","optional":false},{"id":13982993018,"package_name":"semver","ecosystem":"cargo","requirements":"0.1.20","direct":false,"kind":"runtime","optional":false},{"id":13982993019,"package_name":"serde","ecosystem":"cargo","requirements":"1.0.188","direct":false,"kind":"runtime","optional":false},{"id":13982993020,"package_name":"serde_derive","ecosystem":"cargo","requirements":"1.0.188","direct":false,"kind":"runtime","optional":false},{"id":13982993021,"package_name":"simba","ecosystem":"cargo","requirements":"0.6.0","direct":false,"kind":"runtime","optional":false},{"id":13982993022,"package_name":"statrs","ecosystem":"cargo","requirements":"0.16.0","direct":false,"kind":"runtime","optional":false},{"id":13982993023,"package_name":"strsim","ecosystem":"cargo","requirements":"0.10.0","direct":false,"kind":"runtime","optional":false},{"id":13982993024,"package_name":"strum","ecosystem":"cargo","requirements":"0.25.0","direct":false,"kind":"runtime","optional":false},{"id":13982993025,"package_name":"strum_macros","ecosystem":"cargo","requirements":"0.25.2","direct":false,"kind":"runtime","optional":false},{"id":13982993026,"package_name":"syn","ecosystem":"cargo","requirements":"1.0.109","direct":false,"kind":"runtime","optional":false},{"id":13982993027,"package_name":"syn","ecosystem":"cargo","requirements":"2.0.37","direct":false,"kind":"runtime","optional":false},{"id":13982993028,"package_name":"thiserror","ecosystem":"cargo","requirements":"1.0.49","direct":false,"kind":"runtime","optional":false},{"id":13982993029,"package_name":"thiserror-impl","ecosystem":"cargo","requirements":"1.0.49","direct":false,"kind":"runtime","optional":false},{"id":13982993030,"package_name":"triple_accel","ecosystem":"cargo","requirements":"0.4.0","direct":false,"kind":"runtime","optional":false},{"id":13982993031,"package_name":"typenum","ecosystem":"cargo","requirements":"1.17.0","direct":false,"kind":"runtime","optional":false},{"id":13982993032,"package_name":"unicode-ident","ecosystem":"cargo","requirements":"1.0.12","direct":false,"kind":"runtime","optional":false},{"id":13982993033,"package_name":"uom","ecosystem":"cargo","requirements":"0.35.0","direct":false,"kind":"runtime","optional":false},{"id":13982993034,"package_name":"utf8parse","ecosystem":"cargo","requirements":"0.2.1","direct":false,"kind":"runtime","optional":false},{"id":13982993035,"package_name":"vec_map","ecosystem":"cargo","requirements":"0.8.2","direct":false,"kind":"runtime","optional":false},{"id":13982993036,"package_name":"version_check","ecosystem":"cargo","requirements":"0.9.4","direct":false,"kind":"runtime","optional":false},{"id":13982993037,"package_name":"wasi","ecosystem":"cargo","requirements":"0.11.0+wasi-snapshot-preview1","direct":false,"kind":"runtime","optional":false},{"id":13982993038,"package_name":"wide","ecosystem":"cargo","requirements":"0.7.11","direct":false,"kind":"runtime","optional":false},{"id":13982993039,"package_name":"windows-sys","ecosystem":"cargo","requirements":"0.48.0","direct":false,"kind":"runtime","optional":false},{"id":13982993040,"package_name":"windows-targets","ecosystem":"cargo","requirements":"0.48.5","direct":false,"kind":"runtime","optional":false},{"id":13982993041,"package_name":"windows_aarch64_gnullvm","ecosystem":"cargo","requirements":"0.48.5","direct":false,"kind":"runtime","optional":false},{"id":13982993042,"package_name":"windows_aarch64_msvc","ecosystem":"cargo","requirements":"0.48.5","direct":false,"kind":"runtime","optional":false},{"id":13982993043,"package_name":"windows_i686_gnu","ecosystem":"cargo","requirements":"0.48.5","direct":false,"kind":"runtime","optional":false},{"id":13982993044,"package_name":"windows_i686_msvc","ecosystem":"cargo","requirements":"0.48.5","direct":false,"kind":"runtime","optional":false},{"id":13982993045,"package_name":"windows_x86_64_gnu","ecosystem":"cargo","requirements":"0.48.5","direct":false,"kind":"runtime","optional":false},{"id":13982993046,"package_name":"windows_x86_64_gnullvm","ecosystem":"cargo","requirements":"0.48.5","direct":false,"kind":"runtime","optional":false},{"id":13982993047,"package_name":"windows_x86_64_msvc","ecosystem":"cargo","requirements":"0.48.5","direct":false,"kind":"runtime","optional":false}]},{"ecosystem":"cargo","filepath":"Cargo.toml","sha":null,"kind":"manifest","created_at":"2023-09-27T19:34:11.540Z","updated_at":"2023-09-27T19:34:11.540Z","repository_link":"https://github.com/snijderlab/align-cli/blob/main/Cargo.toml","dependencies":[]}],"score":11.915225569735236,"created_at":"2025-09-04T15:51:11.321Z","updated_at":"2025-10-07T08:15:26.568Z","avatar_url":"https://github.com/snijderlab.png","language":"Rust","category":null,"sub_category":null,"monthly_downloads":0,"funding_links":[],"readme_doi_urls":[],"works":{},"citation_counts":{},"total_citations":0,"keywords_from_contributors":[],"project_url":"https://science.ecosyste.ms/api/v1/projects/37528","html_url":"https://science.ecosyste.ms/projects/37528","bibtex_url":"https://science.ecosyste.ms/projects/37528/export.bibtex","apalike_url":"https://science.ecosyste.ms/projects/37528/export.apalike"}