{"id":377,"name":"BrightEyes-MCS","description":"BrightEyes-MCS: a control software for multichannel scanning microscopy - Published in JOSS (2024)","url":"https://github.com/vicidominilab/brighteyes-mcs","last_synced_at":"2025-09-04T15:59:19.983Z","repository":{"id":109065085,"uuid":"535556690","full_name":"VicidominiLab/BrightEyes-MCS","owner":"VicidominiLab","description":"BrightEyes Microscope Control Suite","archived":false,"fork":false,"pushed_at":"2025-09-03T10:54:55.000Z","size":7176,"stargazers_count":7,"open_issues_count":1,"forks_count":2,"subscribers_count":1,"default_branch":"main","last_synced_at":"2025-09-04T10:41:58.367Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":null,"language":"Python","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"gpl-3.0","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/VicidominiLab.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":"CONTRIBUTING.md","funding":null,"license":"LICENSE.md","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null,"notice":null,"maintainers":null,"copyright":null,"agents":null,"dco":null,"cla":null}},"created_at":"2022-09-12T07:31:01.000Z","updated_at":"2025-09-01T09:14:28.000Z","dependencies_parsed_at":"2024-06-28T08:48:05.974Z","dependency_job_id":"212325d4-4e16-47fc-9528-e927529e4fe9","html_url":"https://github.com/VicidominiLab/BrightEyes-MCS","commit_stats":null,"previous_names":[],"tags_count":4,"template":false,"template_full_name":null,"purl":"pkg:github/VicidominiLab/BrightEyes-MCS","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/VicidominiLab%2FBrightEyes-MCS","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/VicidominiLab%2FBrightEyes-MCS/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/VicidominiLab%2FBrightEyes-MCS/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/VicidominiLab%2FBrightEyes-MCS/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/VicidominiLab","download_url":"https://codeload.github.com/VicidominiLab/BrightEyes-MCS/tar.gz/refs/heads/main","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/VicidominiLab%2FBrightEyes-MCS/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":273633514,"owners_count":25140777,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-09-04T02:00:08.968Z","response_time":61,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"owner":{"login":"VicidominiLab","name":"Vicidomini Lab","uuid":"61466143","kind":"user","description":"","email":"","website":"https://vicidominilab.github.io/","location":"Genova, Italy","twitter":"VicidominiLab","company":"Istituto Italiano di Tecnologia","icon_url":"https://avatars.githubusercontent.com/u/61466143?u=7b695c436de36a8bc00bd2615b50c4abe3ff463c\u0026v=4","repositories_count":6,"last_synced_at":"2023-03-04T23:44:04.779Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/VicidominiLab","funding_links":[],"total_stars":null,"followers":null,"following":null,"created_at":"2022-11-15T02:44:18.332Z","updated_at":"2023-03-04T23:44:04.796Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/VicidominiLab","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/VicidominiLab/repositories"},"packages":[],"commits":{"id":9624700,"full_name":"VicidominiLab/BrightEyes-MCS","default_branch":"main","committers":[{"name":"Developer (STED)","email":"mattia.donato@iit.it","login":null,"count":91},{"name":"Vicidomini Lab","email":"giuseppe.vicidomini@iit.it","login":"VicidominiLab","count":42},{"name":"Mattia D.","email":"mattia.donato86@gmail.com","login":"mattia-donato","count":15},{"name":"Developer ISMFLUX","email":"eli.slenders@iit.it","login":null,"count":5}],"total_commits":153,"total_committers":4,"total_bot_commits":0,"total_bot_committers":0,"mean_commits":38.25,"dds":0.40522875816993464,"past_year_committers":[{"name":"Developer (STED)","email":"mattia.donato@iit.it","login":null,"count":56},{"name":"Vicidomini Lab","email":"giuseppe.vicidomini@iit.it","login":"VicidominiLab","count":32},{"name":"Mattia D.","email":"mattia.donato86@gmail.com","login":"mattia-donato","count":9}],"past_year_total_commits":97,"past_year_total_committers":3,"past_year_total_bot_commits":0,"past_year_total_bot_committers":0,"past_year_mean_commits":32.333333333333336,"past_year_dds":0.4226804123711341,"last_synced_at":"2025-08-07T07:31:43.627Z","last_synced_commit":"3586364409be11988fd0ab571c65a65d26286774","created_at":"2025-04-11T10:37:24.717Z","updated_at":"2025-08-07T07:31:43.627Z","commits_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories/VicidominiLab%2FBrightEyes-MCS/commits","host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-02T00:00:07.521Z","repositories_count":5480019,"commits_count":853389012,"contributors_count":31098138,"owners_count":906558,"icon_url":"https://github.com/github.png","host_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories"}},"issues_stats":{"full_name":"VicidominiLab/BrightEyes-MCS","html_url":"https://github.com/VicidominiLab/BrightEyes-MCS","last_synced_at":"2025-09-04T14:57:31.656Z","status":"active","issues_count":3,"pull_requests_count":21,"avg_time_to_close_issue":770266.0,"avg_time_to_close_pull_request":83.85,"issues_closed_count":1,"pull_requests_closed_count":20,"pull_request_authors_count":2,"issue_authors_count":2,"avg_comments_per_issue":2.0,"avg_comments_per_pull_request":0.0,"merged_pull_requests_count":20,"bot_issues_count":0,"bot_pull_requests_count":0,"past_year_issues_count":3,"past_year_pull_requests_count":21,"past_year_avg_time_to_close_issue":770266.0,"past_year_avg_time_to_close_pull_request":83.85,"past_year_issues_closed_count":1,"past_year_pull_requests_closed_count":20,"past_year_pull_request_authors_count":2,"past_year_issue_authors_count":2,"past_year_avg_comments_per_issue":2.0,"past_year_avg_comments_per_pull_request":0.0,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":20,"created_at":"2025-04-11T10:37:24.857Z","updated_at":"2025-09-04T14:57:31.656Z","repository_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/VicidominiLab%2FBrightEyes-MCS","issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/VicidominiLab%2FBrightEyes-MCS/issues","issue_labels_count":{},"pull_request_labels_count":{},"issue_author_associations_count":{"NONE":3},"pull_request_author_associations_count":{"OWNER":18,"COLLABORATOR":3},"issue_authors":{"raacampbell":2,"jacopoabramo":1},"pull_request_authors":{"VicidominiLab":18,"mattia-donato":3},"host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-04T00:00:25.939Z","repositories_count":10080233,"issues_count":31311624,"pull_requests_count":96148338,"authors_count":10693059,"icon_url":"https://github.com/github.png","host_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories","owners_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/owners","authors_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors"},"past_year_issue_labels_count":{},"past_year_pull_request_labels_count":{},"past_year_issue_author_associations_count":{"NONE":3},"past_year_pull_request_author_associations_count":{"OWNER":18,"COLLABORATOR":3},"past_year_issue_authors":{"raacampbell":2,"jacopoabramo":1},"past_year_pull_request_authors":{"VicidominiLab":18,"mattia-donato":3},"maintainers":[{"login":"VicidominiLab","count":18,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/VicidominiLab"},{"login":"mattia-donato","count":3,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/mattia-donato"}],"active_maintainers":[{"login":"VicidominiLab","count":18,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/VicidominiLab"},{"login":"mattia-donato","count":3,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/mattia-donato"}]},"events":{"total":{"ReleaseEvent":2,"WatchEvent":4,"DeleteEvent":4,"PushEvent":42,"PullRequestEvent":1,"GollumEvent":2,"ForkEvent":2,"CreateEvent":7},"last_year":{"ReleaseEvent":2,"WatchEvent":4,"DeleteEvent":4,"PushEvent":43,"PullRequestEvent":2,"GollumEvent":2,"ForkEvent":2,"CreateEvent":7}},"keywords":[],"dependencies":[{"ecosystem":"pypi","filepath":"requirements.txt","sha":null,"kind":"manifest","created_at":"2023-12-12T16:48:53.451Z","updated_at":"2023-12-12T16:48:53.451Z","repository_link":"https://github.com/VicidominiLab/BrightEyes-MCS/blob/main/requirements.txt","dependencies":[{"id":15052270077,"package_name":"pyqtgraph","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":15052270078,"package_name":"numpy","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":15052270079,"package_name":"PySide2","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":15052270080,"package_name":"setuptools","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":15052270081,"package_name":"nifpga","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":15052270345,"package_name":"Cython","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":15052270346,"package_name":"h5py","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":15052270347,"package_name":"scipy","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":15052270348,"package_name":"pyqtdarktheme","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":15052272109,"package_name":"imageio","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":15052272110,"package_name":"qtconsole","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":15052272111,"package_name":"napari","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":15052272496,"package_name":"importlib-metadata","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":15052272500,"package_name":"nifpga-fast-fifo-recv","ecosystem":"pypi","requirements":"\u003e=0.100.1","direct":true,"kind":"runtime","optional":false},{"id":15052272502,"package_name":"atomics","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":15052272885,"package_name":"matplotlib","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false}]},{"ecosystem":"pypi","filepath":"setup.py","sha":null,"kind":"manifest","created_at":"2023-12-12T16:48:55.524Z","updated_at":"2023-12-12T16:48:55.524Z","repository_link":"https://github.com/VicidominiLab/BrightEyes-MCS/blob/main/setup.py","dependencies":[]}],"score":3.465735902799726,"created_at":"2025-09-04T09:17:33.900Z","updated_at":"2025-10-07T08:04:24.726Z","avatar_url":"https://github.com/VicidominiLab.png","language":"Python","category":"Scientific Software","sub_category":"Peer-reviewed","monthly_downloads":0,"funding_links":[],"readme_doi_urls":["https://doi.org/10.21105/joss.07125"],"works":{},"citation_counts":{},"total_citations":0,"keywords_from_contributors":[],"project_url":"https://science.ecosyste.ms/api/v1/projects/377","html_url":"https://science.ecosyste.ms/projects/377"}