{"id":39065,"name":"hpc-workflows","description":"HPC Workflow Management with Snakemake","url":"https://github.com/carpentries-incubator/hpc-workflows","last_synced_at":"2025-09-05T08:00:32.283Z","repository":{"id":165781698,"uuid":"630048447","full_name":"carpentries-incubator/hpc-workflows","owner":"carpentries-incubator","description":"HPC Workflow Management with Snakemake","archived":false,"fork":false,"pushed_at":"2025-09-02T01:22:06.000Z","size":12624,"stargazers_count":3,"open_issues_count":9,"forks_count":4,"subscribers_count":10,"default_branch":"main","last_synced_at":"2025-09-02T02:42:31.053Z","etag":null,"topics":["carpentries-incubator","english","hpc-carpentry","lesson","pre-alpha","snakemake","workflows"],"latest_commit_sha":null,"homepage":"https://carpentries-incubator.github.io/hpc-workflows/","language":"Python","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"other","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/carpentries-incubator.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":"CONTRIBUTING.md","funding":null,"license":"LICENSE.md","code_of_conduct":"CODE_OF_CONDUCT.md","threat_model":null,"audit":null,"citation":"CITATION.cff","codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null,"notice":null,"maintainers":null,"copyright":null,"agents":null,"dco":null,"cla":null},"funding":{"github":["carpentries"],"custom":["https://give.communityin.org/TheCarpentries"]}},"created_at":"2023-04-19T14:58:48.000Z","updated_at":"2025-05-13T04:51:36.000Z","dependencies_parsed_at":null,"dependency_job_id":"c922869b-354a-4bcf-ba66-811b5bebaba0","html_url":"https://github.com/carpentries-incubator/hpc-workflows","commit_stats":{"total_commits":31,"total_committers":7,"mean_commits":4.428571428571429,"dds":0.7096774193548387,"last_synced_commit":"ba7a81f0d9b367f2ad53ce3002abaafb735ec16a"},"previous_names":[],"tags_count":0,"template":false,"template_full_name":"carpentries/workbench-template-rmd","purl":"pkg:github/carpentries-incubator/hpc-workflows","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/carpentries-incubator%2Fhpc-workflows","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/carpentries-incubator%2Fhpc-workflows/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/carpentries-incubator%2Fhpc-workflows/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/carpentries-incubator%2Fhpc-workflows/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/carpentries-incubator","download_url":"https://codeload.github.com/carpentries-incubator/hpc-workflows/tar.gz/refs/heads/main","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/carpentries-incubator%2Fhpc-workflows/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":273728151,"owners_count":25157136,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-09-05T02:00:09.113Z","response_time":402,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"owner":{"login":"carpentries-incubator","name":"carpentries-incubator","uuid":"53264631","kind":"organization","description":"","email":null,"website":null,"location":null,"twitter":null,"company":null,"icon_url":"https://avatars.githubusercontent.com/u/53264631?v=4","repositories_count":107,"last_synced_at":"2023-02-27T03:40:27.694Z","metadata":{"has_sponsors_listing":false,"funding":{"github":["carpentries"],"custom":["https://give.communityin.org/TheCarpentries"]}},"html_url":"https://github.com/carpentries-incubator","funding_links":["https://github.com/sponsors/carpentries","https://give.communityin.org/TheCarpentries"],"total_stars":null,"followers":null,"following":null,"created_at":"2022-11-10T13:05:59.233Z","updated_at":"2023-02-27T03:40:27.711Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/carpentries-incubator","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/carpentries-incubator/repositories"},"packages":[],"commits":{"id":1460948,"full_name":"carpentries-incubator/hpc-workflows","default_branch":"main","committers":[{"name":"Trevor Keller","email":"trevor.keller@nist.gov","login":null,"count":9},{"name":"Alan O'Cais","email":"alan.ocais@cecam.org","login":null,"count":9},{"name":"Andrew Reid","email":"andrew.reid@nist.gov","login":null,"count":6},{"name":"Toby Hodges","email":"tbyhdgs@gmail.com","login":null,"count":3},{"name":"Trevor Keller","email":"trevor.keller@gmail.com","login":null,"count":2},{"name":"ocaisa","email":"ocaisa","login":"ocaisa","count":1},{"name":"tkphd","email":"tkphd","login":"tkphd","count":1}],"total_commits":31,"total_committers":7,"total_bot_commits":0,"total_bot_committers":0,"mean_commits":4.428571428571429,"dds":0.7096774193548387,"past_year_committers":[{"name":"Alan O'Cais","email":"alan.ocais@cecam.org","login":null,"count":9},{"name":"Trevor Keller","email":"trevor.keller@nist.gov","login":null,"count":6},{"name":"Andrew Reid","email":"andrew.reid@nist.gov","login":null,"count":2},{"name":"Trevor Keller","email":"trevor.keller@gmail.com","login":null,"count":1},{"name":"ocaisa","email":"ocaisa","login":"ocaisa","count":1},{"name":"tkphd","email":"tkphd","login":"tkphd","count":1}],"past_year_total_commits":20,"past_year_total_committers":6,"past_year_total_bot_commits":0,"past_year_total_bot_committers":0,"past_year_mean_commits":3.3333333333333335,"past_year_dds":0.55,"last_synced_at":"2024-08-17T11:25:28.540Z","last_synced_commit":"ba7a81f0d9b367f2ad53ce3002abaafb735ec16a","created_at":"2023-12-31T00:10:28.766Z","updated_at":"2024-08-17T11:25:28.541Z","commits_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories/carpentries-incubator%2Fhpc-workflows/commits","host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-05T00:00:10.343Z","repositories_count":5480019,"commits_count":853389012,"contributors_count":31098138,"owners_count":906558,"icon_url":"https://github.com/github.png","host_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories"}},"issues_stats":{"full_name":"carpentries-incubator/hpc-workflows","html_url":"https://github.com/carpentries-incubator/hpc-workflows","last_synced_at":"2024-12-29T12:56:11.885Z","status":null,"issues_count":11,"pull_requests_count":20,"avg_time_to_close_issue":16933175.5,"avg_time_to_close_pull_request":674529.55,"issues_closed_count":2,"pull_requests_closed_count":20,"pull_request_authors_count":4,"issue_authors_count":6,"avg_comments_per_issue":1.2727272727272727,"avg_comments_per_pull_request":1.75,"merged_pull_requests_count":18,"bot_issues_count":0,"bot_pull_requests_count":0,"past_year_issues_count":4,"past_year_pull_requests_count":13,"past_year_avg_time_to_close_issue":2721.0,"past_year_avg_time_to_close_pull_request":928730.0,"past_year_issues_closed_count":1,"past_year_pull_requests_closed_count":13,"past_year_pull_request_authors_count":2,"past_year_issue_authors_count":3,"past_year_avg_comments_per_issue":1.5,"past_year_avg_comments_per_pull_request":1.9230769230769231,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":11,"created_at":"2023-12-31T00:10:33.063Z","updated_at":"2025-09-03T01:24:45.545Z","repository_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/carpentries-incubator%2Fhpc-workflows","issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/carpentries-incubator%2Fhpc-workflows/issues","issue_labels_count":{},"pull_request_labels_count":{"type: template and tools":9},"issue_author_associations_count":{"CONTRIBUTOR":5,"COLLABORATOR":3,"NONE":2,"MEMBER":1},"pull_request_author_associations_count":{"CONTRIBUTOR":22,"COLLABORATOR":9},"issue_authors":{"ocaisa":4,"tkphd":3,"cgross95":1,"guyer":1,"reid-a":1,"tobyhodges":1},"pull_request_authors":{"tkphd":18,"ocaisa":10,"reid-a":3},"host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-05T00:00:10.444Z","repositories_count":10094553,"issues_count":31373669,"pull_requests_count":97058592,"authors_count":10699554,"icon_url":"https://github.com/github.png","host_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories","owners_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/owners","authors_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors"},"past_year_issue_labels_count":{},"past_year_pull_request_labels_count":{"type: template and tools":3},"past_year_issue_author_associations_count":{"CONTRIBUTOR":1},"past_year_pull_request_author_associations_count":{"CONTRIBUTOR":5},"past_year_issue_authors":{"ocaisa":1},"past_year_pull_request_authors":{"tkphd":3,"ocaisa":2},"maintainers":[{"login":"tkphd","count":12,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/tkphd"},{"login":"tobyhodges","count":1,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/tobyhodges"}],"active_maintainers":[]},"events":{"total":{"IssuesEvent":1,"DeleteEvent":3,"IssueCommentEvent":3,"PushEvent":39,"PullRequestReviewEvent":2,"PullRequestEvent":6,"CreateEvent":4},"last_year":{"IssuesEvent":1,"DeleteEvent":3,"IssueCommentEvent":3,"PushEvent":39,"PullRequestReviewEvent":2,"PullRequestEvent":6,"CreateEvent":4}},"keywords":["carpentries-incubator","english","hpc-carpentry","lesson","pre-alpha","snakemake","workflows"],"dependencies":[],"score":4.430816798843313,"created_at":"2025-09-04T15:51:13.211Z","updated_at":"2025-10-07T08:16:00.632Z","avatar_url":"https://github.com/carpentries-incubator.png","language":"Python","category":null,"sub_category":null,"monthly_downloads":0,"funding_links":["https://github.com/sponsors/carpentries","https://give.communityin.org/TheCarpentries"],"readme_doi_urls":[],"works":{},"citation_counts":{},"total_citations":0,"keywords_from_contributors":["alpha","carpentry-lesson","helpwanted-list","auroc","bootstrapping","data-leakage","prediction","beta","github-pages","jekyll"],"project_url":"https://science.ecosyste.ms/api/v1/projects/39065","html_url":"https://science.ecosyste.ms/projects/39065","bibtex_url":"https://science.ecosyste.ms/projects/39065/export.bibtex","apalike_url":"https://science.ecosyste.ms/projects/39065/export.apalike"}