{"id":41070,"name":"snakemake-learning","description":"GitHub Repository for the snakemake learn session at the @MannLabs Group Retreat 2025","url":"https://github.com/lucas-diedrich/snakemake-learning","last_synced_at":"2025-09-05T08:53:19.961Z","repository":{"id":295384402,"uuid":"989187087","full_name":"lucas-diedrich/snakemake-learning","owner":"lucas-diedrich","description":"GitHub Repository for the snakemake learn session at the @MannLabs Group Retreat 2025","archived":false,"fork":false,"pushed_at":"2025-07-10T12:55:00.000Z","size":1101,"stargazers_count":1,"open_issues_count":0,"forks_count":0,"subscribers_count":0,"default_branch":"main","last_synced_at":"2025-07-10T19:53:18.595Z","etag":null,"topics":["tutorial"],"latest_commit_sha":null,"homepage":"","language":"Python","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"mit","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/lucas-diedrich.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":"CITATION.cff","codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null}},"created_at":"2025-05-23T17:40:55.000Z","updated_at":"2025-07-10T12:29:03.000Z","dependencies_parsed_at":"2025-05-25T09:26:35.923Z","dependency_job_id":"10220e89-599b-4ab8-b208-442448be0d89","html_url":"https://github.com/lucas-diedrich/snakemake-learning","commit_stats":null,"previous_names":["lucas-diedrich/snakemake-learning"],"tags_count":2,"template":false,"template_full_name":null,"purl":"pkg:github/lucas-diedrich/snakemake-learning","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/lucas-diedrich%2Fsnakemake-learning","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/lucas-diedrich%2Fsnakemake-learning/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/lucas-diedrich%2Fsnakemake-learning/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/lucas-diedrich%2Fsnakemake-learning/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/lucas-diedrich","download_url":"https://codeload.github.com/lucas-diedrich/snakemake-learning/tar.gz/refs/heads/main","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/lucas-diedrich%2Fsnakemake-learning/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":273734394,"owners_count":25158269,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-09-05T02:00:09.113Z","response_time":402,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"owner":{"login":"lucas-diedrich","name":"Lucas Diedrich","uuid":"86159938","kind":"user","description":"M.Sc. student of biochemistry @HeidelbergUniversity ","email":"","website":"https://lucas-diedrich.github.io/","location":null,"twitter":"lucas__1406","company":null,"icon_url":"https://avatars.githubusercontent.com/u/86159938?u=3a6f2b68783e3a44e09dc688155c64f07db6fc58\u0026v=4","repositories_count":8,"last_synced_at":"2024-05-14T00:05:55.190Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/lucas-diedrich","funding_links":[],"total_stars":3,"followers":4,"following":10,"created_at":"2023-05-04T02:26:25.940Z","updated_at":"2024-05-14T00:05:56.634Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/lucas-diedrich","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/lucas-diedrich/repositories"},"packages":[],"commits":{"message":"Repository syncing started."},"issues_stats":{"full_name":"lucas-diedrich/snakemake-learning","html_url":"https://github.com/lucas-diedrich/snakemake-learning","last_synced_at":null,"status":null,"issues_count":null,"pull_requests_count":null,"avg_time_to_close_issue":null,"avg_time_to_close_pull_request":null,"issues_closed_count":null,"pull_requests_closed_count":null,"pull_request_authors_count":null,"issue_authors_count":null,"avg_comments_per_issue":null,"avg_comments_per_pull_request":null,"merged_pull_requests_count":null,"bot_issues_count":null,"bot_pull_requests_count":null,"past_year_issues_count":null,"past_year_pull_requests_count":null,"past_year_avg_time_to_close_issue":null,"past_year_avg_time_to_close_pull_request":null,"past_year_issues_closed_count":null,"past_year_pull_requests_closed_count":null,"past_year_pull_request_authors_count":null,"past_year_issue_authors_count":null,"past_year_avg_comments_per_issue":null,"past_year_avg_comments_per_pull_request":null,"past_year_bot_issues_count":null,"past_year_bot_pull_requests_count":null,"past_year_merged_pull_requests_count":null,"created_at":"2025-09-05T08:52:08.763Z","updated_at":"2025-09-05T08:52:08.763Z","repository_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/lucas-diedrich%2Fsnakemake-learning","issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/lucas-diedrich%2Fsnakemake-learning/issues","issue_labels_count":{},"pull_request_labels_count":{},"issue_author_associations_count":{},"pull_request_author_associations_count":{},"issue_authors":{},"pull_request_authors":{},"host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-05T00:00:10.444Z","repositories_count":10095965,"issues_count":31399514,"pull_requests_count":97158349,"authors_count":10700272,"icon_url":"https://github.com/github.png","host_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories","owners_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/owners","authors_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors"},"past_year_issue_labels_count":{},"past_year_pull_request_labels_count":{},"past_year_issue_author_associations_count":{},"past_year_pull_request_author_associations_count":{},"past_year_issue_authors":{},"past_year_pull_request_authors":{},"maintainers":[],"active_maintainers":[]},"events":{"total":{"DeleteEvent":4,"PushEvent":23,"CreateEvent":5},"last_year":{"DeleteEvent":4,"PushEvent":23,"CreateEvent":5}},"keywords":["tutorial"],"dependencies":[{"ecosystem":"pypi","filepath":"environment.yaml","sha":null,"kind":"manifest","created_at":"2025-05-25T09:26:34.840Z","updated_at":"2025-05-25T09:26:34.840Z","repository_link":"https://github.com/lucas-diedrich/snakemake-learning/blob/main/environment.yaml","dependencies":[{"id":23292311040,"package_name":"snakemake","ecosystem":"pypi","requirements":"==9.5.1","direct":true,"kind":"runtime","optional":false},{"id":23292311041,"package_name":"Pygments","ecosystem":"pypi","requirements":"==2.19.1","direct":true,"kind":"runtime","optional":false}]},{"ecosystem":"pypi","filepath":"workflow/envs/environment.yaml","sha":null,"kind":"manifest","created_at":"2025-05-25T09:26:35.738Z","updated_at":"2025-05-25T09:26:35.738Z","repository_link":"https://github.com/lucas-diedrich/snakemake-learning/blob/main/workflow/envs/environment.yaml","dependencies":[]}],"score":null,"created_at":"2025-09-04T15:51:15.766Z","updated_at":"2025-10-07T08:16:45.307Z","avatar_url":"https://github.com/lucas-diedrich.png","language":"Python","category":null,"sub_category":null,"monthly_downloads":0,"funding_links":[],"readme_doi_urls":["https://doi.org/10.12688/f1000research.29032.2"],"works":{},"citation_counts":{},"total_citations":0,"keywords_from_contributors":[],"project_url":"https://science.ecosyste.ms/api/v1/projects/41070","html_url":"https://science.ecosyste.ms/projects/41070","bibtex_url":"https://science.ecosyste.ms/projects/41070/export.bibtex","apalike_url":"https://science.ecosyste.ms/projects/41070/export.apalike"}