{"id":41711,"name":"openfold","description":"Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2","url":"https://github.com/aqlaboratory/openfold","last_synced_at":"2025-09-05T09:08:29.822Z","repository":{"id":37073111,"uuid":"406555580","full_name":"aqlaboratory/openfold","owner":"aqlaboratory","description":"Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2","archived":false,"fork":false,"pushed_at":"2025-08-12T05:04:36.000Z","size":19969,"stargazers_count":3096,"open_issues_count":223,"forks_count":620,"subscribers_count":46,"default_branch":"main","last_synced_at":"2025-09-04T10:34:45.727Z","etag":null,"topics":["alphafold2","protein-structure","pytorch"],"latest_commit_sha":null,"homepage":"","language":"Python","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"apache-2.0","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/aqlaboratory.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":"CITATION.cff","codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null}},"created_at":"2021-09-14T23:59:02.000Z","updated_at":"2025-09-04T01:48:06.000Z","dependencies_parsed_at":"2023-09-22T05:53:42.331Z","dependency_job_id":"5a966055-bcd3-4b68-80d4-1c625a67309c","html_url":"https://github.com/aqlaboratory/openfold","commit_stats":null,"previous_names":[],"tags_count":6,"template":false,"template_full_name":null,"purl":"pkg:github/aqlaboratory/openfold","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fopenfold","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fopenfold/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fopenfold/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fopenfold/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/aqlaboratory","download_url":"https://codeload.github.com/aqlaboratory/openfold/tar.gz/refs/heads/main","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fopenfold/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":273734600,"owners_count":25158282,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-09-05T02:00:09.113Z","response_time":402,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"owner":{"login":"aqlaboratory","name":"AQ Laboratory","uuid":"8396911","kind":"organization","description":"","email":"m.alquraishi@columbia.edu","website":"aqlab.io","location":"Columbia University","twitter":"MoAlQuraishi","company":null,"icon_url":"https://avatars.githubusercontent.com/u/8396911?v=4","repositories_count":17,"last_synced_at":"2025-08-29T07:09:55.149Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/aqlaboratory","funding_links":[],"total_stars":4949,"followers":256,"following":0,"created_at":"2022-11-09T04:24:18.616Z","updated_at":"2025-08-29T07:09:55.150Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/aqlaboratory","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/aqlaboratory/repositories"},"packages":[{"id":6509344,"name":"openfold2","ecosystem":"pypi","description":"A PyTorch reimplementation of DeepMind's AlphaFold 2","homepage":"https://github.com/aqlaboratory/openfold","licenses":"Apache License, Version 2.0","normalized_licenses":["Apache-2.0"],"repository_url":"https://github.com/aqlaboratory/openfold","keywords_array":[],"namespace":null,"versions_count":1,"first_release_published_at":"2023-03-11T23:05:32.000Z","latest_release_published_at":"2023-03-11T23:05:32.000Z","latest_release_number":"0.0.1","last_synced_at":"2025-08-24T21:38:47.638Z","created_at":"2023-03-11T23:42:44.107Z","updated_at":"2025-08-24T23:07:27.838Z","registry_url":"https://pypi.org/project/openfold2/","install_command":"pip install openfold2 --index-url https://pypi.org/simple","documentation_url":"https://openfold2.readthedocs.io/","metadata":{"funding":null,"documentation":null,"classifiers":["Programming Language :: Python :: 3","Programming Language :: Python :: 3.10","Programming Language :: Python :: 3.11","Programming Language :: Python :: 3.8","Programming Language :: Python :: 3.9"],"normalized_name":"openfold2","project_status":null},"repo_metadata":{"id":37073111,"uuid":"406555580","full_name":"aqlaboratory/openfold","owner":"aqlaboratory","description":"Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2","archived":false,"fork":false,"pushed_at":"2025-08-12T05:04:36.000Z","size":19969,"stargazers_count":3089,"open_issues_count":221,"forks_count":620,"subscribers_count":47,"default_branch":"main","last_synced_at":"2025-08-24T18:58:13.313Z","etag":null,"topics":["alphafold2","protein-structure","pytorch"],"latest_commit_sha":null,"homepage":"","language":"Python","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"apache-2.0","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/aqlaboratory.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":"CITATION.cff","codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null}},"created_at":"2021-09-14T23:59:02.000Z","updated_at":"2025-08-23T12:54:57.000Z","dependencies_parsed_at":"2023-09-22T05:53:42.331Z","dependency_job_id":"5a966055-bcd3-4b68-80d4-1c625a67309c","html_url":"https://github.com/aqlaboratory/openfold","commit_stats":null,"previous_names":[],"tags_count":6,"template":false,"template_full_name":null,"purl":"pkg:github/aqlaboratory/openfold","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fopenfold","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fopenfold/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fopenfold/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fopenfold/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/aqlaboratory","download_url":"https://codeload.github.com/aqlaboratory/openfold/tar.gz/refs/heads/main","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fopenfold/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":271970626,"owners_count":24851756,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-08-24T02:00:11.135Z","response_time":111,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"},"owner_record":{"login":"aqlaboratory","name":"AQ Laboratory","uuid":"8396911","kind":"organization","description":"","email":"m.alquraishi@columbia.edu","website":"aqlab.io","location":"Columbia University","twitter":"MoAlQuraishi","company":null,"icon_url":"https://avatars.githubusercontent.com/u/8396911?v=4","repositories_count":17,"last_synced_at":"2025-08-18T12:32:10.895Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/aqlaboratory","funding_links":[],"total_stars":4934,"followers":252,"following":0,"created_at":"2022-11-09T04:24:18.616Z","updated_at":"2025-08-18T12:32:10.895Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/aqlaboratory","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/aqlaboratory/repositories"},"tags":[{"name":"v2.2.0","sha":"e938c184a291bf053af3b14c1e3e8bb29aee57e2","kind":"commit","published_at":"2025-04-26T01:31:36.000Z","download_url":"https://codeload.github.com/aqlaboratory/openfold/tar.gz/v2.2.0","html_url":"https://github.com/aqlaboratory/openfold/releases/tag/v2.2.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/aqlaboratory/openfold@v2.2.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fopenfold/tags/v2.2.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fopenfold/tags/v2.2.0/manifests"},{"name":"v.2.1.0","sha":"f434a2786b5a6b39171f358fb3470ad9f4fd2a58","kind":"commit","published_at":"2024-05-13T10:02:28.000Z","download_url":"https://codeload.github.com/aqlaboratory/openfold/tar.gz/v.2.1.0","html_url":"https://github.com/aqlaboratory/openfold/releases/tag/v.2.1.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/aqlaboratory/openfold@v.2.1.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fopenfold/tags/v.2.1.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fopenfold/tags/v.2.1.0/manifests"},{"name":"v2.0.0","sha":"bb3f51e5a2cf2d5e3b709fe8f7d7a083c870222e","kind":"commit","published_at":"2024-02-08T04:06:08.000Z","download_url":"https://codeload.github.com/aqlaboratory/openfold/tar.gz/v2.0.0","html_url":"https://github.com/aqlaboratory/openfold/releases/tag/v2.0.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/aqlaboratory/openfold@v2.0.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fopenfold/tags/v2.0.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fopenfold/tags/v2.0.0/manifests"},{"name":"v1.0.1","sha":"42e71db7fa327e0810eb0e371abc9f82aa9b7a6a","kind":"commit","published_at":"2022-11-23T00:30:10.000Z","download_url":"https://codeload.github.com/aqlaboratory/openfold/tar.gz/v1.0.1","html_url":"https://github.com/aqlaboratory/openfold/releases/tag/v1.0.1","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/aqlaboratory/openfold@v1.0.1","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fopenfold/tags/v1.0.1","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fopenfold/tags/v1.0.1/manifests"},{"name":"v1.0.0","sha":"6da2cdafc902d423cf7c136d66fbe81484d2cd0a","kind":"commit","published_at":"2022-06-22T08:08:04.000Z","download_url":"https://codeload.github.com/aqlaboratory/openfold/tar.gz/v1.0.0","html_url":"https://github.com/aqlaboratory/openfold/releases/tag/v1.0.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/aqlaboratory/openfold@v1.0.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fopenfold/tags/v1.0.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fopenfold/tags/v1.0.0/manifests"},{"name":"v0.1.0","sha":"8d1119dff18506588604949d2cc81997d63cd911","kind":"commit","published_at":"2021-11-18T05:10:53.000Z","download_url":"https://codeload.github.com/aqlaboratory/openfold/tar.gz/v0.1.0","html_url":"https://github.com/aqlaboratory/openfold/releases/tag/v0.1.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/aqlaboratory/openfold@v0.1.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fopenfold/tags/v0.1.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fopenfold/tags/v0.1.0/manifests"}]},"repo_metadata_updated_at":"2025-08-24T23:07:27.837Z","dependent_packages_count":0,"downloads":4,"downloads_period":"last-month","dependent_repos_count":0,"rankings":{"downloads":34.31933987623768,"dependent_repos_count":30.61104109666564,"dependent_packages_count":6.633233862033089,"stargazers_count":1.5689040091069566,"forks_count":2.906433855938567,"average":15.207790539996386},"purl":"pkg:pypi/openfold2","advisories":[],"docker_usage_url":"https://docker.ecosyste.ms/usage/pypi/openfold2","docker_dependents_count":null,"docker_downloads_count":null,"usage_url":"https://repos.ecosyste.ms/usage/pypi/openfold2","dependent_repositories_url":"https://repos.ecosyste.ms/api/v1/usage/pypi/openfold2/dependencies","status":null,"funding_links":[],"critical":null,"issue_metadata":{"last_synced_at":"2025-08-16T19:38:17.129Z","issues_count":277,"pull_requests_count":147,"avg_time_to_close_issue":2356259.460526316,"avg_time_to_close_pull_request":1572269.4830508474,"issues_closed_count":76,"pull_requests_closed_count":118,"pull_request_authors_count":49,"issue_authors_count":168,"avg_comments_per_issue":3.075812274368231,"avg_comments_per_pull_request":0.46258503401360546,"merged_pull_requests_count":86,"bot_issues_count":0,"bot_pull_requests_count":6,"past_year_issues_count":53,"past_year_pull_requests_count":29,"past_year_avg_time_to_close_issue":1268828.8,"past_year_avg_time_to_close_pull_request":1127630.9473684211,"past_year_issues_closed_count":10,"past_year_pull_requests_closed_count":19,"past_year_pull_request_authors_count":17,"past_year_issue_authors_count":41,"past_year_avg_comments_per_issue":1.4339622641509433,"past_year_avg_comments_per_pull_request":0.3793103448275862,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":11,"issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fopenfold/issues","maintainers":[{"login":"jnwei","count":20,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/jnwei"},{"login":"ljarosch","count":4,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/ljarosch"},{"login":"josemduarte","count":4,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/josemduarte"},{"login":"gahdritz","count":3,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/gahdritz"},{"login":"christinaflo","count":3,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/christinaflo"},{"login":"decarboxy","count":1,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/decarboxy"},{"login":"lucasgascon","count":1,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/lucasgascon"},{"login":"sachinkadyan7","count":1,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/sachinkadyan7"}],"active_maintainers":[{"login":"jnwei","count":4,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/jnwei"},{"login":"josemduarte","count":1,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/josemduarte"}]},"versions_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/packages/openfold2/versions","version_numbers_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/packages/openfold2/version_numbers","dependent_packages_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/packages/openfold2/dependent_packages","related_packages_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/packages/openfold2/related_packages","maintainers":[{"uuid":"wufuheng","login":"wufuheng","name":null,"email":null,"url":null,"packages_count":16,"html_url":"https://pypi.org/user/wufuheng/","role":null,"created_at":"2023-03-12T00:04:02.095Z","updated_at":"2023-03-12T00:04:02.095Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/maintainers/wufuheng/packages"}],"registry":{"name":"pypi.org","url":"https://pypi.org","ecosystem":"pypi","default":true,"packages_count":725067,"maintainers_count":308348,"namespaces_count":0,"keywords_count":238006,"github":"pypi","metadata":{"funded_packages_count":50519},"icon_url":"https://github.com/pypi.png","created_at":"2022-04-04T15:19:23.364Z","updated_at":"2025-09-05T05:40:58.860Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/packages","maintainers_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/maintainers","namespaces_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/namespaces"}},{"id":6509243,"name":"openfold","ecosystem":"pypi","description":"A PyTorch reimplementation of DeepMind's AlphaFold 2","homepage":"https://github.com/aqlaboratory/openfold","licenses":"Apache License, Version 2.0","normalized_licenses":["Apache-2.0"],"repository_url":"https://github.com/aqlaboratory/openfold","keywords_array":[],"namespace":null,"versions_count":1,"first_release_published_at":"2023-03-11T21:52:18.000Z","latest_release_published_at":"2023-03-11T21:52:18.000Z","latest_release_number":"0.0.1","last_synced_at":"2025-08-24T21:38:47.682Z","created_at":"2023-03-11T22:45:47.081Z","updated_at":"2025-08-24T23:07:27.839Z","registry_url":"https://pypi.org/project/openfold/","install_command":"pip install openfold --index-url https://pypi.org/simple","documentation_url":"https://openfold.readthedocs.io/","metadata":{"funding":null,"documentation":null,"classifiers":["Programming Language :: Python :: 3","Programming Language :: Python :: 3.10","Programming Language :: Python :: 3.11","Programming Language :: Python :: 3.8","Programming Language :: Python :: 3.9"],"normalized_name":"openfold","project_status":null},"repo_metadata":{"id":37073111,"uuid":"406555580","full_name":"aqlaboratory/openfold","owner":"aqlaboratory","description":"Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2","archived":false,"fork":false,"pushed_at":"2025-08-12T05:04:36.000Z","size":19969,"stargazers_count":3089,"open_issues_count":221,"forks_count":620,"subscribers_count":47,"default_branch":"main","last_synced_at":"2025-08-24T18:58:13.313Z","etag":null,"topics":["alphafold2","protein-structure","pytorch"],"latest_commit_sha":null,"homepage":"","language":"Python","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"apache-2.0","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/aqlaboratory.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":"CITATION.cff","codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null}},"created_at":"2021-09-14T23:59:02.000Z","updated_at":"2025-08-23T12:54:57.000Z","dependencies_parsed_at":"2023-09-22T05:53:42.331Z","dependency_job_id":"5a966055-bcd3-4b68-80d4-1c625a67309c","html_url":"https://github.com/aqlaboratory/openfold","commit_stats":null,"previous_names":[],"tags_count":6,"template":false,"template_full_name":null,"purl":"pkg:github/aqlaboratory/openfold","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fopenfold","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fopenfold/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fopenfold/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fopenfold/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/aqlaboratory","download_url":"https://codeload.github.com/aqlaboratory/openfold/tar.gz/refs/heads/main","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fopenfold/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":271970626,"owners_count":24851756,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-08-24T02:00:11.135Z","response_time":111,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"},"owner_record":{"login":"aqlaboratory","name":"AQ Laboratory","uuid":"8396911","kind":"organization","description":"","email":"m.alquraishi@columbia.edu","website":"aqlab.io","location":"Columbia University","twitter":"MoAlQuraishi","company":null,"icon_url":"https://avatars.githubusercontent.com/u/8396911?v=4","repositories_count":17,"last_synced_at":"2025-08-18T12:32:10.895Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/aqlaboratory","funding_links":[],"total_stars":4934,"followers":252,"following":0,"created_at":"2022-11-09T04:24:18.616Z","updated_at":"2025-08-18T12:32:10.895Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/aqlaboratory","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/aqlaboratory/repositories"},"tags":[{"name":"v2.2.0","sha":"e938c184a291bf053af3b14c1e3e8bb29aee57e2","kind":"commit","published_at":"2025-04-26T01:31:36.000Z","download_url":"https://codeload.github.com/aqlaboratory/openfold/tar.gz/v2.2.0","html_url":"https://github.com/aqlaboratory/openfold/releases/tag/v2.2.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/aqlaboratory/openfold@v2.2.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fopenfold/tags/v2.2.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fopenfold/tags/v2.2.0/manifests"},{"name":"v.2.1.0","sha":"f434a2786b5a6b39171f358fb3470ad9f4fd2a58","kind":"commit","published_at":"2024-05-13T10:02:28.000Z","download_url":"https://codeload.github.com/aqlaboratory/openfold/tar.gz/v.2.1.0","html_url":"https://github.com/aqlaboratory/openfold/releases/tag/v.2.1.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/aqlaboratory/openfold@v.2.1.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fopenfold/tags/v.2.1.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fopenfold/tags/v.2.1.0/manifests"},{"name":"v2.0.0","sha":"bb3f51e5a2cf2d5e3b709fe8f7d7a083c870222e","kind":"commit","published_at":"2024-02-08T04:06:08.000Z","download_url":"https://codeload.github.com/aqlaboratory/openfold/tar.gz/v2.0.0","html_url":"https://github.com/aqlaboratory/openfold/releases/tag/v2.0.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/aqlaboratory/openfold@v2.0.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fopenfold/tags/v2.0.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fopenfold/tags/v2.0.0/manifests"},{"name":"v1.0.1","sha":"42e71db7fa327e0810eb0e371abc9f82aa9b7a6a","kind":"commit","published_at":"2022-11-23T00:30:10.000Z","download_url":"https://codeload.github.com/aqlaboratory/openfold/tar.gz/v1.0.1","html_url":"https://github.com/aqlaboratory/openfold/releases/tag/v1.0.1","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/aqlaboratory/openfold@v1.0.1","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fopenfold/tags/v1.0.1","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fopenfold/tags/v1.0.1/manifests"},{"name":"v1.0.0","sha":"6da2cdafc902d423cf7c136d66fbe81484d2cd0a","kind":"commit","published_at":"2022-06-22T08:08:04.000Z","download_url":"https://codeload.github.com/aqlaboratory/openfold/tar.gz/v1.0.0","html_url":"https://github.com/aqlaboratory/openfold/releases/tag/v1.0.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/aqlaboratory/openfold@v1.0.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fopenfold/tags/v1.0.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fopenfold/tags/v1.0.0/manifests"},{"name":"v0.1.0","sha":"8d1119dff18506588604949d2cc81997d63cd911","kind":"commit","published_at":"2021-11-18T05:10:53.000Z","download_url":"https://codeload.github.com/aqlaboratory/openfold/tar.gz/v0.1.0","html_url":"https://github.com/aqlaboratory/openfold/releases/tag/v0.1.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/aqlaboratory/openfold@v0.1.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fopenfold/tags/v0.1.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fopenfold/tags/v0.1.0/manifests"}]},"repo_metadata_updated_at":"2025-08-24T23:07:27.838Z","dependent_packages_count":1,"downloads":361,"downloads_period":"last-month","dependent_repos_count":1,"rankings":{"downloads":17.963660348072334,"dependent_repos_count":22.23893976550684,"dependent_packages_count":7.377175419682736,"stargazers_count":1.5068106499181853,"forks_count":2.7761713113831905,"docker_downloads_count":null,"average":10.372551498912657},"purl":"pkg:pypi/openfold","advisories":[],"docker_usage_url":"https://docker.ecosyste.ms/usage/pypi/openfold","docker_dependents_count":0,"docker_downloads_count":0,"usage_url":"https://repos.ecosyste.ms/usage/pypi/openfold","dependent_repositories_url":"https://repos.ecosyste.ms/api/v1/usage/pypi/openfold/dependencies","status":null,"funding_links":[],"critical":null,"issue_metadata":{"last_synced_at":"2025-08-16T19:38:17.129Z","issues_count":277,"pull_requests_count":147,"avg_time_to_close_issue":2356259.460526316,"avg_time_to_close_pull_request":1572269.4830508474,"issues_closed_count":76,"pull_requests_closed_count":118,"pull_request_authors_count":49,"issue_authors_count":168,"avg_comments_per_issue":3.075812274368231,"avg_comments_per_pull_request":0.46258503401360546,"merged_pull_requests_count":86,"bot_issues_count":0,"bot_pull_requests_count":6,"past_year_issues_count":53,"past_year_pull_requests_count":29,"past_year_avg_time_to_close_issue":1268828.8,"past_year_avg_time_to_close_pull_request":1127630.9473684211,"past_year_issues_closed_count":10,"past_year_pull_requests_closed_count":19,"past_year_pull_request_authors_count":17,"past_year_issue_authors_count":41,"past_year_avg_comments_per_issue":1.4339622641509433,"past_year_avg_comments_per_pull_request":0.3793103448275862,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":11,"issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fopenfold/issues","maintainers":[{"login":"jnwei","count":20,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/jnwei"},{"login":"ljarosch","count":4,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/ljarosch"},{"login":"josemduarte","count":4,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/josemduarte"},{"login":"gahdritz","count":3,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/gahdritz"},{"login":"christinaflo","count":3,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/christinaflo"},{"login":"decarboxy","count":1,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/decarboxy"},{"login":"lucasgascon","count":1,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/lucasgascon"},{"login":"sachinkadyan7","count":1,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/sachinkadyan7"}],"active_maintainers":[{"login":"jnwei","count":4,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/jnwei"},{"login":"josemduarte","count":1,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/josemduarte"}]},"versions_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/packages/openfold/versions","version_numbers_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/packages/openfold/version_numbers","dependent_packages_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/packages/openfold/dependent_packages","related_packages_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/packages/openfold/related_packages","maintainers":[{"uuid":"juncongmoo","login":"juncongmoo","name":null,"email":null,"url":null,"packages_count":20,"html_url":"https://pypi.org/user/juncongmoo/","role":null,"created_at":"2023-03-11T23:13:35.593Z","updated_at":"2023-03-11T23:13:35.593Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/maintainers/juncongmoo/packages"}],"registry":{"name":"pypi.org","url":"https://pypi.org","ecosystem":"pypi","default":true,"packages_count":725067,"maintainers_count":308348,"namespaces_count":0,"keywords_count":238006,"github":"pypi","metadata":{"funded_packages_count":50519},"icon_url":"https://github.com/pypi.png","created_at":"2022-04-04T15:19:23.364Z","updated_at":"2025-09-05T05:40:58.860Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/packages","maintainers_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/maintainers","namespaces_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/namespaces"}},{"id":10352667,"name":"github.com/aqlaboratory/openfold","ecosystem":"go","description":null,"homepage":null,"licenses":"apache-2.0","normalized_licenses":["Apache-2.0"],"repository_url":"https://github.com/aqlaboratory/openfold","keywords_array":[],"namespace":null,"versions_count":5,"first_release_published_at":"2021-11-18T05:10:53.000Z","latest_release_published_at":"2025-04-26T01:31:36.000Z","latest_release_number":"v2.2.0+incompatible","last_synced_at":"2025-08-24T21:38:49.615Z","created_at":"2024-06-11T15:46:13.988Z","updated_at":"2025-08-24T23:07:27.841Z","registry_url":"https://pkg.go.dev/github.com/aqlaboratory/openfold","install_command":"go get github.com/aqlaboratory/openfold","documentation_url":"https://pkg.go.dev/github.com/aqlaboratory/openfold#section-documentation","metadata":{},"repo_metadata":{"id":37073111,"uuid":"406555580","full_name":"aqlaboratory/openfold","owner":"aqlaboratory","description":"Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2","archived":false,"fork":false,"pushed_at":"2025-08-12T05:04:36.000Z","size":19969,"stargazers_count":3089,"open_issues_count":221,"forks_count":620,"subscribers_count":47,"default_branch":"main","last_synced_at":"2025-08-24T18:58:13.313Z","etag":null,"topics":["alphafold2","protein-structure","pytorch"],"latest_commit_sha":null,"homepage":"","language":"Python","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"apache-2.0","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/aqlaboratory.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":"CITATION.cff","codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null}},"created_at":"2021-09-14T23:59:02.000Z","updated_at":"2025-08-23T12:54:57.000Z","dependencies_parsed_at":"2023-09-22T05:53:42.331Z","dependency_job_id":"5a966055-bcd3-4b68-80d4-1c625a67309c","html_url":"https://github.com/aqlaboratory/openfold","commit_stats":null,"previous_names":[],"tags_count":6,"template":false,"template_full_name":null,"purl":"pkg:github/aqlaboratory/openfold","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fopenfold","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fopenfold/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fopenfold/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fopenfold/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/aqlaboratory","download_url":"https://codeload.github.com/aqlaboratory/openfold/tar.gz/refs/heads/main","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fopenfold/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":271970626,"owners_count":24851756,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-08-24T02:00:11.135Z","response_time":111,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"},"owner_record":{"login":"aqlaboratory","name":"AQ Laboratory","uuid":"8396911","kind":"organization","description":"","email":"m.alquraishi@columbia.edu","website":"aqlab.io","location":"Columbia University","twitter":"MoAlQuraishi","company":null,"icon_url":"https://avatars.githubusercontent.com/u/8396911?v=4","repositories_count":17,"last_synced_at":"2025-08-18T12:32:10.895Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/aqlaboratory","funding_links":[],"total_stars":4934,"followers":252,"following":0,"created_at":"2022-11-09T04:24:18.616Z","updated_at":"2025-08-18T12:32:10.895Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/aqlaboratory","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/aqlaboratory/repositories"},"tags":[{"name":"v2.2.0","sha":"e938c184a291bf053af3b14c1e3e8bb29aee57e2","kind":"commit","published_at":"2025-04-26T01:31:36.000Z","download_url":"https://codeload.github.com/aqlaboratory/openfold/tar.gz/v2.2.0","html_url":"https://github.com/aqlaboratory/openfold/releases/tag/v2.2.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/aqlaboratory/openfold@v2.2.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fopenfold/tags/v2.2.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fopenfold/tags/v2.2.0/manifests"},{"name":"v.2.1.0","sha":"f434a2786b5a6b39171f358fb3470ad9f4fd2a58","kind":"commit","published_at":"2024-05-13T10:02:28.000Z","download_url":"https://codeload.github.com/aqlaboratory/openfold/tar.gz/v.2.1.0","html_url":"https://github.com/aqlaboratory/openfold/releases/tag/v.2.1.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/aqlaboratory/openfold@v.2.1.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fopenfold/tags/v.2.1.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fopenfold/tags/v.2.1.0/manifests"},{"name":"v2.0.0","sha":"bb3f51e5a2cf2d5e3b709fe8f7d7a083c870222e","kind":"commit","published_at":"2024-02-08T04:06:08.000Z","download_url":"https://codeload.github.com/aqlaboratory/openfold/tar.gz/v2.0.0","html_url":"https://github.com/aqlaboratory/openfold/releases/tag/v2.0.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/aqlaboratory/openfold@v2.0.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fopenfold/tags/v2.0.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fopenfold/tags/v2.0.0/manifests"},{"name":"v1.0.1","sha":"42e71db7fa327e0810eb0e371abc9f82aa9b7a6a","kind":"commit","published_at":"2022-11-23T00:30:10.000Z","download_url":"https://codeload.github.com/aqlaboratory/openfold/tar.gz/v1.0.1","html_url":"https://github.com/aqlaboratory/openfold/releases/tag/v1.0.1","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/aqlaboratory/openfold@v1.0.1","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fopenfold/tags/v1.0.1","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fopenfold/tags/v1.0.1/manifests"},{"name":"v1.0.0","sha":"6da2cdafc902d423cf7c136d66fbe81484d2cd0a","kind":"commit","published_at":"2022-06-22T08:08:04.000Z","download_url":"https://codeload.github.com/aqlaboratory/openfold/tar.gz/v1.0.0","html_url":"https://github.com/aqlaboratory/openfold/releases/tag/v1.0.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/aqlaboratory/openfold@v1.0.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fopenfold/tags/v1.0.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fopenfold/tags/v1.0.0/manifests"},{"name":"v0.1.0","sha":"8d1119dff18506588604949d2cc81997d63cd911","kind":"commit","published_at":"2021-11-18T05:10:53.000Z","download_url":"https://codeload.github.com/aqlaboratory/openfold/tar.gz/v0.1.0","html_url":"https://github.com/aqlaboratory/openfold/releases/tag/v0.1.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/aqlaboratory/openfold@v0.1.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fopenfold/tags/v0.1.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fopenfold/tags/v0.1.0/manifests"}]},"repo_metadata_updated_at":"2025-08-24T23:07:27.840Z","dependent_packages_count":0,"downloads":null,"downloads_period":null,"dependent_repos_count":0,"rankings":{"downloads":null,"dependent_repos_count":6.966061736475957,"dependent_packages_count":6.527826853133711,"stargazers_count":null,"forks_count":null,"docker_downloads_count":null,"average":6.746944294804834},"purl":"pkg:golang/github.com/aqlaboratory/openfold","advisories":[],"docker_usage_url":"https://docker.ecosyste.ms/usage/go/github.com/aqlaboratory/openfold","docker_dependents_count":null,"docker_downloads_count":null,"usage_url":"https://repos.ecosyste.ms/usage/go/github.com/aqlaboratory/openfold","dependent_repositories_url":"https://repos.ecosyste.ms/api/v1/usage/go/github.com/aqlaboratory/openfold/dependencies","status":null,"funding_links":[],"critical":null,"issue_metadata":{"last_synced_at":"2025-08-16T19:38:17.129Z","issues_count":277,"pull_requests_count":147,"avg_time_to_close_issue":2356259.460526316,"avg_time_to_close_pull_request":1572269.4830508474,"issues_closed_count":76,"pull_requests_closed_count":118,"pull_request_authors_count":49,"issue_authors_count":168,"avg_comments_per_issue":3.075812274368231,"avg_comments_per_pull_request":0.46258503401360546,"merged_pull_requests_count":86,"bot_issues_count":0,"bot_pull_requests_count":6,"past_year_issues_count":53,"past_year_pull_requests_count":29,"past_year_avg_time_to_close_issue":1268828.8,"past_year_avg_time_to_close_pull_request":1127630.9473684211,"past_year_issues_closed_count":10,"past_year_pull_requests_closed_count":19,"past_year_pull_request_authors_count":17,"past_year_issue_authors_count":41,"past_year_avg_comments_per_issue":1.4339622641509433,"past_year_avg_comments_per_pull_request":0.3793103448275862,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":11,"issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fopenfold/issues","maintainers":[{"login":"jnwei","count":20,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/jnwei"},{"login":"ljarosch","count":4,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/ljarosch"},{"login":"josemduarte","count":4,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/josemduarte"},{"login":"gahdritz","count":3,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/gahdritz"},{"login":"christinaflo","count":3,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/christinaflo"},{"login":"decarboxy","count":1,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/decarboxy"},{"login":"lucasgascon","count":1,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/lucasgascon"},{"login":"sachinkadyan7","count":1,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/sachinkadyan7"}],"active_maintainers":[{"login":"jnwei","count":4,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/jnwei"},{"login":"josemduarte","count":1,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/josemduarte"}]},"versions_url":"https://packages.ecosyste.ms/api/v1/registries/proxy.golang.org/packages/github.com%2Faqlaboratory%2Fopenfold/versions","version_numbers_url":"https://packages.ecosyste.ms/api/v1/registries/proxy.golang.org/packages/github.com%2Faqlaboratory%2Fopenfold/version_numbers","dependent_packages_url":"https://packages.ecosyste.ms/api/v1/registries/proxy.golang.org/packages/github.com%2Faqlaboratory%2Fopenfold/dependent_packages","related_packages_url":"https://packages.ecosyste.ms/api/v1/registries/proxy.golang.org/packages/github.com%2Faqlaboratory%2Fopenfold/related_packages","maintainers":[],"registry":{"name":"proxy.golang.org","url":"https://proxy.golang.org","ecosystem":"go","default":true,"packages_count":1952121,"maintainers_count":0,"namespaces_count":741275,"keywords_count":109185,"github":"golang","metadata":{"funded_packages_count":49011},"icon_url":"https://github.com/golang.png","created_at":"2022-04-04T15:19:22.939Z","updated_at":"2025-09-05T05:14:06.439Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/proxy.golang.org/packages","maintainers_url":"https://packages.ecosyste.ms/api/v1/registries/proxy.golang.org/maintainers","namespaces_url":"https://packages.ecosyste.ms/api/v1/registries/proxy.golang.org/namespaces"}}],"commits":{"id":1776903,"full_name":"aqlaboratory/openfold","default_branch":"main","committers":[{"name":"Gustaf Ahdritz","email":"gahdritz@gmail.com","login":"gahdritz","count":617},{"name":"jnwei","email":"jennifer.wei@omsf.io","login":"jnwei","count":222},{"name":"Geoffrey Yu","email":"geoffrey.yu96@icloud.com","login":"dingquanyu","count":181},{"name":"Sachin Kadyan","email":"sachinkadyan7@gmail.com","login":"sachinkadyan7","count":111},{"name":"Christina Floristean","email":"christina.floristean@gmail.com","login":"christinaflo","count":73},{"name":"Dingquan Yu","email":"geoffreyyu@Geoffreys-MacBook-Pro.local","login":null,"count":20},{"name":"Sam DeLuca","email":"sam@cyrusbio.com","login":"decarboxy","count":18},{"name":"Jose Duarte","email":"jose.m.duarte@gmail.com","login":"josemduarte","count":17},{"name":"Lukas Jarosch","email":"lukas.jarosch@gmx.net","login":"ljarosch","count":17},{"name":"Vaclav Hanzl","email":"64649594+vaclavhanzl","login":"vaclavhanzl","count":16},{"name":"Marta","email":"martas@nvidia.com","login":"marta-sd","count":13},{"name":"Brian Loyal","email":"bloyal@amazon.com","login":"brianloyal","count":10},{"name":"Tim O'Donnell","email":"timodonnell@gmail.com","login":"timodonnell","count":9},{"name":"etowahadams","email":"etowahadams@gmail.com","login":"etowahadams","count":8},{"name":"rostro36","email":"jannik.gut@unibe.ch","login":"rostro36","count":8},{"name":"Matthew W. Thompson","email":"mattwthompson@protonmail.com","login":"mattwthompson","count":6},{"name":"Christian Clauss","email":"cclauss@me.com","login":"cclauss","count":6},{"name":"Lucas Bickmann","email":"l_bick03@uni-muenster.de","login":null,"count":6},{"name":"dependabot[bot]","email":"49699333+dependabot[bot]","login":"dependabot[bot]","count":4},{"name":"Nikita Smetanin","email":"nikitozzz.pl@gmail.com","login":"nikita-smetanin","count":4},{"name":"Kolja Stahl","email":"kolja.stahl@tu-berlin.de","login":null,"count":4},{"name":"Zhang690683220","email":"zhangbo_china@live.cn","login":"bozhang-hpc","count":3},{"name":"Niccolò Zanichelli","email":"61413132+NZ99","login":"NZ99","count":3},{"name":"Karl Leswing","email":"karl.leswing@gmail.com","login":"lilleswing","count":3},{"name":"Jonathan King","email":"jonathanking@berkeley.edu","login":"jonathanking","count":3},{"name":"yoel shoshan","email":"yoels@il.ibm.com","login":null,"count":2},{"name":"controny","email":"0755dimitri@gmail.com","login":"controny","count":2},{"name":"awaelchli","email":"aedu.waelchli@gmail.com","login":"awaelchli","count":2},{"name":"Santi Villalba","email":"sdvillal@gmail.com","login":"sdvillal","count":2},{"name":"Mohammed AlQuraishi","email":"alquraishi","login":"alquraishi","count":2},{"name":"Wei Lu （陆威）","email":"luwei0917@gmail.com","login":"luwei0917","count":1},{"name":"Arkadiusz Nowaczynski","email":"anowaczynski@nvidia.com","login":null,"count":1},{"name":"Bei Wang","email":"beiw@computelab-frontend-2.nvidia.com","login":null,"count":1},{"name":"Bei Wang","email":"beiw@computelab-frontend-3.nvidia.com","login":null,"count":1},{"name":"Nikita Smetanin","email":"nikitasmetanin@fb.com","login":null,"count":1},{"name":"Pavel Durandin","email":"pavel.durandin@gmail.com","login":null,"count":1},{"name":"sft-managed","email":"u00u98too4mkqFBu8M357@rl-cpu-c24-u40-eno1","login":null,"count":1},{"name":"Zhouran Qiao zhuoran.qiao@entos.ai","email":"zhuoran@sonic-ssh.entos-foundry.ai","login":null,"count":1},{"name":"Zhaocheng Zhu","email":"healmysoul@163.com","login":"KiddoZhu","count":1},{"name":"Zhuoran Qiao","email":"zrqiao0@gmail.com","login":"zrqiao","count":1},{"name":"atgctg","email":"105969161+atgctg","login":"atgctg","count":1},{"name":"epenning","email":"epennington10@gmail.com","login":"epenning","count":1},{"name":"mhrmsn","email":"49688144+mhrmsn","login":"mhrmsn","count":1},{"name":"yuzhiguo07","email":"yuzhi.guo@mavs.uta.edu","login":"yuzhiguo07","count":1},{"name":"Saurav Maheshkar","email":"sauravvmaheshkar@gmail.com","login":"SauravMaheshkar","count":1},{"name":"Ryan Kosai","email":"rk@ryankosai.com","login":"ryan-attunely","count":1},{"name":"Eric Ma","email":"ericmjl","login":"ericmjl","count":1},{"name":"Adrian (Mircea) Nenu","email":"adrian.nenu@gmail.com","login":"nenuadrian","count":1}],"total_commits":1410,"total_committers":48,"total_bot_commits":4,"total_bot_committers":1,"mean_commits":29.375,"dds":0.5624113475177305,"past_year_committers":[{"name":"Jennifer Wei","email":"jennifer.wei@omsf.io","login":"jnwei","count":17},{"name":"etowahadams","email":"etowahadams@gmail.com","login":"etowahadams","count":8},{"name":"Vaclav Hanzl","email":"64649594+vaclavhanzl","login":"vaclavhanzl","count":3},{"name":"rostro36","email":"jannik.gut@unibe.ch","login":"rostro36","count":2},{"name":"ljarosch","email":"lukas.jarosch@gmx.net","login":"ljarosch","count":1},{"name":"Ryan Kosai","email":"rk@ryankosai.com","login":"ryan-attunely","count":1},{"name":"Adrian (Mircea) Nenu","email":"adrian.nenu@gmail.com","login":"nenuadrian","count":1}],"past_year_total_commits":33,"past_year_total_committers":7,"past_year_total_bot_commits":0,"past_year_total_bot_committers":0,"past_year_mean_commits":4.714285714285714,"past_year_dds":0.48484848484848486,"last_synced_at":"2025-05-14T01:51:55.964Z","last_synced_commit":"e938c184a291bf053af3b14c1e3e8bb29aee57e2","created_at":"2024-09-20T16:57:12.443Z","updated_at":"2025-05-14T01:51:56.062Z","commits_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fopenfold/commits","host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-05T00:00:10.343Z","repositories_count":5480019,"commits_count":853389012,"contributors_count":31098138,"owners_count":906558,"icon_url":"https://github.com/github.png","host_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories"}},"issues_stats":{"full_name":"aqlaboratory/openfold","html_url":"https://github.com/aqlaboratory/openfold","last_synced_at":"2025-08-31T11:58:36.633Z","status":null,"issues_count":216,"pull_requests_count":128,"avg_time_to_close_issue":2496803.0476190476,"avg_time_to_close_pull_request":1766116.3490566039,"issues_closed_count":63,"pull_requests_closed_count":106,"pull_request_authors_count":49,"issue_authors_count":169,"avg_comments_per_issue":2.7685185185185186,"avg_comments_per_pull_request":0.5078125,"merged_pull_requests_count":75,"bot_issues_count":0,"bot_pull_requests_count":3,"past_year_issues_count":38,"past_year_pull_requests_count":32,"past_year_avg_time_to_close_issue":578884.7142857143,"past_year_avg_time_to_close_pull_request":1142048.7391304348,"past_year_issues_closed_count":7,"past_year_pull_requests_closed_count":23,"past_year_pull_request_authors_count":15,"past_year_issue_authors_count":31,"past_year_avg_comments_per_issue":0.6842105263157895,"past_year_avg_comments_per_pull_request":0.21875,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":12,"created_at":"2023-05-15T06:38:48.419Z","updated_at":"2025-09-03T05:59:58.483Z","repository_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fopenfold","issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/aqlaboratory%2Fopenfold/issues","issue_labels_count":{"documentation":1},"pull_request_labels_count":{"dependencies":3},"issue_author_associations_count":{"NONE":197,"CONTRIBUTOR":13,"COLLABORATOR":4},"pull_request_author_associations_count":{"NONE":72,"COLLABORATOR":47,"CONTRIBUTOR":40},"issue_authors":{"abhinavb22":6,"vaclavhanzl":5,"jong3":4,"RJ3":3,"agustin-ormazabal":3,"jonathanking":3,"liweiqing1997":3,"brucejwittmann":3,"vetmax7":3,"yuzimu1":3,"Ottovonxu":2,"roivant-matts":2,"emzodls":2,"lucajovine":2,"tsjain":2,"Luofan-KK":2,"tonyageall":2,"OliviaViessmann":2,"C-de-Furina":2,"awaelchli":2,"jnwei":2,"OH-AU":2,"lzhangUT":2,"starkhu":2,"chinmayraneQ":2,"llwx593":2,"hnisonoff":2,"Ericzhang1":2,"ToHanwei":2,"Zoesgithub":2,"wangjiawen2013":2,"calmasri":2,"SingL3":1,"nickraisgit":1,"psohani":1,"leiterenato":1,"Zhu-Siqi":1,"AlejandroSanchezCano":1,"Lucie02Rose":1,"gezmi":1,"373375458":1,"biocodz":1,"Pellarin":1,"longerzone":1,"happy-nozaki":1,"Zhang690683220":1,"TonnarCastellano":1,"lkqnaruto":1,"Lix1993":1,"rfilgueiras":1,"Minys233":1,"JannikSchneider12":1,"xianruizhong":1,"jozhang97":1,"sr5434":1,"maartensandbox":1,"YiningWang2":1,"hungd238":1,"lhatsk":1,"hanrthu":1,"chrjxj":1,"mukulem":1,"ulupo":1,"elmerfer":1,"hkenlay":1,"flowers9":1,"Baldwin-disso":1,"dthorburn":1,"rafaeltiveron":1,"SimonKitSangChu":1,"bing-song":1,"reedharrison":1,"moises-maestro-puxano":1,"blakemertz":1,"tyler-hayes":1,"gahdritz":1,"zjyuan1208":1,"Melo-1017":1,"cifnik":1,"smallfishabc":1,"ecfischer":1,"jiepan1":1,"soumyadipghosh":1,"liuxm117":1,"mheinzinger":1,"LaurinLang":1,"Wan8uq1":1,"evancollins1":1,"wtni-gidle":1,"shruthivis":1,"ArsLeicholt":1,"RuiWang1998":1,"goran-mh":1,"michalozeryflato":1,"zdlzglzll":1,"amorehead":1,"dxu16":1,"guzmanfj":1,"pengshuang":1,"rmarabini":1,"muuu23333":1,"pikruse":1,"nobleaustine":1,"jproney":1,"sid-betalol":1,"damiano-sg":1,"sgyersula":1,"d-mz":1,"real-junjiezhang":1,"RaidenE1":1,"marctormo":1,"zouzh14":1,"DieHof":1,"JeongSooNa":1,"meneshail":1,"eswan01":1,"Old-Shatterhand":1,"tkramer-motion":1,"Teohoho":1,"eguarnera":1,"empyriumz":1,"pujaltes":1,"ryao-mdanderson":1,"WhenMelancholy":1,"guolinke":1,"JinyuanSun":1,"rrw1007":1,"LucasRiboli":1,"CharlieNALAN":1,"wahabk":1,"Paulie-ai":1,"ecalfee":1,"tryumanshow":1,"pranavmahabs":1,"tonydavis629":1,"johnny-rodriguez":1,"xuagu37":1,"TobiasPol":1,"bzhousd":1,"bzjf":1,"amardeepranu":1,"tanhevg":1,"sharish24":1,"carlmensch":1,"cpplyqz":1,"ozsolomon":1,"fapirro":1,"cbaakman":1,"lonelycrab888":1,"jotech":1,"gvisani":1,"jimmyz100":1,"Cweb118":1,"chewyalvin":1,"yzb123789":1,"georgkempf":1,"Wenjian-Ma":1,"ccsiszer":1,"chunhui-shi":1,"DomML":1,"srayan00":1,"Alain-chavanieu":1,"josemduarte":1,"VarunUllanat":1,"raragreen":1,"moritzschaefer":1},"pull_request_authors":{"jnwei":27,"dingquanyu":17,"vaclavhanzl":14,"etowahadams":9,"ljarosch":8,"jnooree":4,"juliocesar-io":4,"josemduarte":4,"YoelShoshan":4,"amorehead":3,"jonathanking":3,"Lix1993":3,"christinaflo":3,"an1lam":3,"dependabot[bot]":3,"jaimec00":2,"jflucier":2,"nikitos9000":2,"ioannisa92":2,"controny":2,"jyaacoub":2,"rostro36":2,"moritzschaefer":2,"awaelchli":2,"nenuadrian":2,"afairley":2,"l-bick":2,"Jiangdaoyin92":2,"gahdritz":2,"davidsimon":2,"pranavmahabs":1,"mattwthompson":1,"psohani":1,"jkosinski":1,"luwei0917":1,"rkosai":1,"sachinkadyan7":1,"stevennguyen":1,"kfeng123":1,"empyriumz":1,"decarboxy":1,"nehap25":1,"michalozeryflato":1,"lucasgascon":1,"p-durandin":1,"scttl":1,"MarcoMorik":1,"zrqiao":1,"sef43":1,"conradry":1},"host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-05T00:00:10.444Z","repositories_count":10095926,"issues_count":31397479,"pull_requests_count":97150418,"authors_count":10700329,"icon_url":"https://github.com/github.png","host_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories","owners_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/owners","authors_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors"},"past_year_issue_labels_count":{"documentation":1},"past_year_pull_request_labels_count":{},"past_year_issue_author_associations_count":{"NONE":39,"COLLABORATOR":1,"CONTRIBUTOR":1},"past_year_pull_request_author_associations_count":{"NONE":22,"CONTRIBUTOR":11,"COLLABORATOR":6},"past_year_issue_authors":{"jong3":4,"yuzimu1":3,"abhinavb22":2,"wangjiawen2013":2,"tsjain":2,"Lix1993":1,"LucasRiboli":1,"marctormo":1,"nobleaustine":1,"OliviaViessmann":1,"pranavmahabs":1,"real-junjiezhang":1,"reedharrison":1,"TonnarCastellano":1,"tyler-hayes":1,"ulupo":1,"Wan8uq1":1,"zdlzglzll":1,"leiterenato":1,"jotech":1,"johnny-rodriguez":1,"jnwei":1,"JannikSchneider12":1,"hungd238":1,"happy-nozaki":1,"gvisani":1,"eswan01":1,"dxu16":1,"CharlieNALAN":1,"cbaakman":1,"blakemertz":1,"biocodz":1,"373375458":1},"past_year_pull_request_authors":{"etowahadams":9,"jnwei":6,"Lix1993":3,"an1lam":3,"davidsimon":2,"nenuadrian":2,"Jiangdaoyin92":2,"jaimec00":2,"ioannisa92":2,"vaclavhanzl":2,"juliocesar-io":2,"nehap25":1,"scttl":1,"pranavmahabs":1,"psohani":1},"maintainers":[{"login":"jnwei","count":29,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/jnwei"},{"login":"ljarosch","count":8,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/ljarosch"},{"login":"josemduarte","count":5,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/josemduarte"},{"login":"christinaflo","count":3,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/christinaflo"},{"login":"gahdritz","count":3,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/gahdritz"},{"login":"lucasgascon","count":1,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/lucasgascon"},{"login":"sachinkadyan7","count":1,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/sachinkadyan7"},{"login":"decarboxy","count":1,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/decarboxy"}],"active_maintainers":[{"login":"jnwei","count":7,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/jnwei"}]},"events":{"total":{"CreateEvent":4,"ReleaseEvent":1,"IssuesEvent":43,"WatchEvent":319,"DeleteEvent":1,"IssueCommentEvent":80,"PushEvent":10,"PullRequestReviewEvent":4,"PullRequestReviewCommentEvent":4,"PullRequestEvent":33,"ForkEvent":93},"last_year":{"CreateEvent":4,"ReleaseEvent":1,"IssuesEvent":43,"WatchEvent":319,"DeleteEvent":1,"IssueCommentEvent":80,"PushEvent":10,"PullRequestReviewEvent":4,"PullRequestReviewCommentEvent":4,"PullRequestEvent":33,"ForkEvent":93}},"keywords":["alphafold2","protein-structure","pytorch"],"dependencies":[{"ecosystem":"actions","filepath":".github/workflows/docker-image.yml","sha":null,"kind":"manifest","created_at":"2023-09-22T05:53:40.642Z","updated_at":"2023-09-22T05:53:40.642Z","repository_link":"https://github.com/aqlaboratory/openfold/blob/main/.github/workflows/docker-image.yml","dependencies":[{"id":13866946048,"package_name":"actions/checkout","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false}]},{"ecosystem":"actions","filepath":".github/workflows/undefined_names.yml","sha":null,"kind":"manifest","created_at":"2023-09-22T05:53:40.818Z","updated_at":"2023-09-22T05:53:40.818Z","repository_link":"https://github.com/aqlaboratory/openfold/blob/main/.github/workflows/undefined_names.yml","dependencies":[{"id":13866946056,"package_name":"actions/checkout","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":13866946057,"package_name":"actions/setup-python","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false}]},{"ecosystem":"docker","filepath":"Dockerfile","sha":null,"kind":"manifest","created_at":"2023-09-22T05:53:41.736Z","updated_at":"2023-09-22T05:53:41.736Z","repository_link":"https://github.com/aqlaboratory/openfold/blob/main/Dockerfile","dependencies":[{"id":13866948765,"package_name":"nvidia/cuda","ecosystem":"docker","requirements":"11.3.1-cudnn8-runtime-ubuntu18.04","direct":true,"kind":"build","optional":false}]},{"ecosystem":"pypi","filepath":"environment.yml","sha":null,"kind":"manifest","created_at":"2023-09-22T05:53:41.766Z","updated_at":"2023-09-22T05:53:41.766Z","repository_link":"https://github.com/aqlaboratory/openfold/blob/main/environment.yml","dependencies":[{"id":13866948766,"package_name":"biopython","ecosystem":"pypi","requirements":"==1.79","direct":true,"kind":"runtime","optional":false},{"id":13866948773,"package_name":"deepspeed","ecosystem":"pypi","requirements":"==0.5.10","direct":true,"kind":"runtime","optional":false},{"id":13866948774,"package_name":"dm-tree","ecosystem":"pypi","requirements":"==0.1.6","direct":true,"kind":"runtime","optional":false},{"id":13866948775,"package_name":"ml-collections","ecosystem":"pypi","requirements":"==0.1.0","direct":true,"kind":"runtime","optional":false},{"id":13866948776,"package_name":"numpy","ecosystem":"pypi","requirements":"==1.21.2","direct":true,"kind":"runtime","optional":false},{"id":13866948777,"package_name":"PyYAML","ecosystem":"pypi","requirements":"==5.4.1","direct":true,"kind":"runtime","optional":false},{"id":13866948778,"package_name":"requests","ecosystem":"pypi","requirements":"==2.26.0","direct":true,"kind":"runtime","optional":false},{"id":13866948779,"package_name":"scipy","ecosystem":"pypi","requirements":"==1.7.1","direct":true,"kind":"runtime","optional":false},{"id":13866948780,"package_name":"tqdm","ecosystem":"pypi","requirements":"==4.62.2","direct":true,"kind":"runtime","optional":false},{"id":13866948781,"package_name":"typing-extensions","ecosystem":"pypi","requirements":"==3.10.0.2","direct":true,"kind":"runtime","optional":false},{"id":13866948782,"package_name":"pytorch_lightning","ecosystem":"pypi","requirements":"==1.5.10","direct":true,"kind":"runtime","optional":false},{"id":13866948783,"package_name":"wandb","ecosystem":"pypi","requirements":"==0.12.21","direct":true,"kind":"runtime","optional":false},{"id":13866948784,"package_name":"modelcif","ecosystem":"pypi","requirements":"==0.7","direct":true,"kind":"runtime","optional":false}]},{"ecosystem":"pypi","filepath":"notebooks/environment.yml","sha":null,"kind":"manifest","created_at":"2023-09-22T05:53:42.118Z","updated_at":"2023-09-22T05:53:42.118Z","repository_link":"https://github.com/aqlaboratory/openfold/blob/main/notebooks/environment.yml","dependencies":[{"id":13866948785,"package_name":"biopython","ecosystem":"pypi","requirements":"==1.79","direct":true,"kind":"runtime","optional":false},{"id":13866948786,"package_name":"dm-tree","ecosystem":"pypi","requirements":"==0.1.6","direct":true,"kind":"runtime","optional":false},{"id":13866948787,"package_name":"ml-collections","ecosystem":"pypi","requirements":"==0.1.0","direct":true,"kind":"runtime","optional":false},{"id":13866948788,"package_name":"PyYAML","ecosystem":"pypi","requirements":"==5.4.1","direct":true,"kind":"runtime","optional":false},{"id":13866948789,"package_name":"requests","ecosystem":"pypi","requirements":"==2.26.0","direct":true,"kind":"runtime","optional":false},{"id":13866948790,"package_name":"typing-extensions","ecosystem":"pypi","requirements":"==3.10.0.2","direct":true,"kind":"runtime","optional":false}]},{"ecosystem":"pypi","filepath":"setup.py","sha":null,"kind":"manifest","created_at":"2023-09-22T05:53:42.239Z","updated_at":"2023-09-22T05:53:42.239Z","repository_link":"https://github.com/aqlaboratory/openfold/blob/main/setup.py","dependencies":[]}],"score":17.889416466668393,"created_at":"2025-09-04T15:51:16.523Z","updated_at":"2025-10-07T08:16:59.505Z","avatar_url":"https://github.com/aqlaboratory.png","language":"Python","category":null,"sub_category":null,"monthly_downloads":365,"funding_links":[],"readme_doi_urls":[],"works":{},"citation_counts":{},"total_citations":0,"keywords_from_contributors":["optimizing-compiler","cryptocurrencies","tensors","embedded","agents","application","multi-agents","genomics","datacleaner","pipeline-testing"],"project_url":"https://science.ecosyste.ms/api/v1/projects/41711","html_url":"https://science.ecosyste.ms/projects/41711","bibtex_url":"https://science.ecosyste.ms/projects/41711/export.bibtex","apalike_url":"https://science.ecosyste.ms/projects/41711/export.apalike"}