{"id":421,"name":"OpenMD","description":"OpenMD: A parallel molecular dynamics engine for complex systems and interfaces - Published in JOSS (2024)","url":"https://github.com/openmd/openmd","last_synced_at":"2025-09-04T15:59:46.828Z","repository":{"id":29218938,"uuid":"32750591","full_name":"OpenMD/OpenMD","owner":"OpenMD","description":"Molecular Dynamics in the Open","archived":false,"fork":false,"pushed_at":"2025-09-01T14:46:41.000Z","size":61987,"stargazers_count":83,"open_issues_count":0,"forks_count":33,"subscribers_count":19,"default_branch":"main","last_synced_at":"2025-09-04T00:43:29.684Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":"http://openmd.org","language":"C++","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"bsd-3-clause","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/OpenMD.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":".github/CONTRIBUTING.md","funding":null,"license":"LICENSE","code_of_conduct":".github/CODE_OF_CONDUCT.md","threat_model":null,"audit":null,"citation":"CITATION.cff","codeowners":null,"security":".github/SECURITY.md","support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null}},"created_at":"2015-03-23T18:22:26.000Z","updated_at":"2025-09-01T14:46:44.000Z","dependencies_parsed_at":"2023-02-15T12:15:34.522Z","dependency_job_id":"8157e97c-c7c5-401f-a3b9-14f546f85e5a","html_url":"https://github.com/OpenMD/OpenMD","commit_stats":null,"previous_names":[],"tags_count":3,"template":false,"template_full_name":null,"purl":"pkg:github/OpenMD/OpenMD","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/OpenMD%2FOpenMD","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/OpenMD%2FOpenMD/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/OpenMD%2FOpenMD/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/OpenMD%2FOpenMD/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/OpenMD","download_url":"https://codeload.github.com/OpenMD/OpenMD/tar.gz/refs/heads/main","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/OpenMD%2FOpenMD/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":273594766,"owners_count":25134207,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-09-04T02:00:08.968Z","response_time":61,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"owner":{"login":"OpenMD","name":"OpenMD","uuid":"6164615","kind":"organization","description":"Molecular Dynamics in the Open","email":null,"website":"http://openmd.org","location":"South Bend, IN","twitter":null,"company":null,"icon_url":"https://avatars.githubusercontent.com/u/6164615?v=4","repositories_count":3,"last_synced_at":"2023-02-28T22:55:19.728Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/OpenMD","funding_links":[],"total_stars":null,"followers":null,"following":null,"created_at":"2022-11-11T23:38:48.748Z","updated_at":"2023-02-28T22:55:19.772Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/OpenMD","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/OpenMD/repositories"},"packages":[],"commits":{"id":9624722,"full_name":"OpenMD/OpenMD","default_branch":"main","committers":[{"name":"Dan Gezelter","email":"gezelter@nd.edu","login":"gezelter","count":1699},{"name":"Teng Lin","email":"teng.lin@gmail.com","login":"teng-lin","count":426},{"name":"Charles Vardeman","email":"charles.vardeman@gmail.com","login":"charlesvardeman","count":317},{"name":"Christopher Fennell","email":"cfennell@gmail.com","login":"cfennell","count":199},{"name":"Patrick Louden","email":"plouden@nd.edu","login":"Patrick-Louden","count":176},{"name":"crdrisko","email":"crdrisko@fastmail.com","login":"crdrisko","count":166},{"name":"Hematna Bhattarai","email":"excuzme.hemanta@gmail.com","login":"Hemanta-Bhattarai","count":95},{"name":"Xiuquan Sun","email":"Xiuquan.Sun@pnnl.gov","login":null,"count":27},{"name":"Joseph Michalka","email":"Joseph.Michalka@gmail.com","login":"jmichalka","count":25},{"name":"Sydney Shavalier","email":"sshavali@nd.edu","login":"sshavali","count":14},{"name":"Shenyu Kuang","email":"shenyu.kuang@gmail.com","login":null,"count":14},{"name":"Soren Holm","email":"sholm@prudence.campus.nd.edu","login":null,"count":12},{"name":"Kelsey Stocker","email":"kelseystocker@gmail.com","login":"KelseyStocker","count":11},{"name":"Chunlei Li","email":"cli2@nd.edu","login":null,"count":11},{"name":"James Marr","email":"jmarr@nd.edu","login":"jmarr2013","count":9},{"name":"Anderson","email":"adasilv3@nd.edu","login":"adasilv3","count":8},{"name":"Kyle Daily","email":"kdaily@gmail.com","login":"123bacon321","count":7},{"name":"Christie Puglis","email":"cpuglis@nd.edu","login":null,"count":6},{"name":"Minh Nhat Pham","email":"mpham5@nd.edu","login":"nhatp1808","count":5},{"name":"Hythem Sidky","email":"hsidky@nd.edu","login":"hsidky","count":4},{"name":"Martin Vala","email":"mvala@saske.sk","login":null,"count":4},{"name":"Patrick-Louden","email":"Patrick@Grimore.local","login":null,"count":3},{"name":"OpenMD","email":"OpenMD","login":"OpenMD","count":3},{"name":"Kenneth Fletcher","email":"fletcha@msn.com","login":null,"count":2},{"name":"Alexander Mazanek","email":"35498597+LightningSpud","login":"LightningSpud","count":2},{"name":"Dan Gezelter","email":"gezelter@eyeball.private","login":null,"count":1},{"name":"Dan Gezelter","email":"gezelter@Viper.local","login":null,"count":1},{"name":"Cody Ryan Drisko","email":"cdrisko@crcfe02.crc.nd.edu","login":null,"count":1},{"name":"Cody Drisko","email":"crdrisko@hermes.local","login":null,"count":1},{"name":"Benjamin Harless","email":"bharless@walrus.chem.nd.edu","login":null,"count":1},{"name":"Anderson Da Silva Duraes","email":"adasilv3@axiom.chem.nd.edu","login":null,"count":1},{"name":"Dan Gezelter","email":"gezelter@rocinante.dhcp.nd.edu","login":null,"count":1},{"name":"Dan Gezelter","email":"gezelter@viper.dhcp.nd.edu","login":null,"count":1},{"name":"Minh Nhat Pham","email":"mpham5@nostromo.chem.nd.edu","login":null,"count":1},{"name":"Madan Lamichhane","email":"Madan.Lamichhane.1@nd.edu","login":null,"count":1},{"name":"Gianluca Puliti","email":"pulit125@gmail.com","login":null,"count":1},{"name":"Julien Nabet","email":"serval2412@yahoo.fr","login":"serval2412","count":1}],"total_commits":3257,"total_committers":37,"total_bot_commits":0,"total_bot_committers":0,"mean_commits":88.02702702702703,"dds":0.4783543137856924,"past_year_committers":[{"name":"Dan Gezelter","email":"gezelter@nd.edu","login":"gezelter","count":84},{"name":"crdrisko","email":"crdrisko@fastmail.com","login":"crdrisko","count":48},{"name":"Minh Nhat Pham","email":"mpham5@nd.edu","login":"nhatp1808","count":5}],"past_year_total_commits":137,"past_year_total_committers":3,"past_year_total_bot_commits":0,"past_year_total_bot_committers":0,"past_year_mean_commits":45.666666666666664,"past_year_dds":0.3868613138686131,"last_synced_at":"2025-08-07T07:22:52.601Z","last_synced_commit":"2de3d4fca05ca285825b359f5e9355054b42af69","created_at":"2025-04-11T10:44:08.515Z","updated_at":"2025-08-07T07:22:52.612Z","commits_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories/OpenMD%2FOpenMD/commits","host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-08-21T00:00:20.603Z","repositories_count":5479765,"commits_count":853308133,"contributors_count":31095153,"owners_count":906558,"icon_url":"https://github.com/github.png","host_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories"}},"issues_stats":{"full_name":"OpenMD/OpenMD","html_url":"https://github.com/OpenMD/OpenMD","last_synced_at":"2025-08-31T20:08:10.403Z","status":"error","issues_count":13,"pull_requests_count":14,"avg_time_to_close_issue":43223009.84615385,"avg_time_to_close_pull_request":5792994.928571428,"issues_closed_count":13,"pull_requests_closed_count":14,"pull_request_authors_count":7,"issue_authors_count":5,"avg_comments_per_issue":1.3846153846153846,"avg_comments_per_pull_request":0.42857142857142855,"merged_pull_requests_count":12,"bot_issues_count":0,"bot_pull_requests_count":0,"past_year_issues_count":1,"past_year_pull_requests_count":1,"past_year_avg_time_to_close_issue":65345.0,"past_year_avg_time_to_close_pull_request":599.0,"past_year_issues_closed_count":1,"past_year_pull_requests_closed_count":1,"past_year_pull_request_authors_count":1,"past_year_issue_authors_count":1,"past_year_avg_comments_per_issue":2.0,"past_year_avg_comments_per_pull_request":0.0,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":1,"created_at":"2025-04-11T10:44:09.146Z","updated_at":"2025-09-02T14:39:07.521Z","repository_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/OpenMD%2FOpenMD","issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/OpenMD%2FOpenMD/issues","issue_labels_count":{"enhancement":3,"bug":2,"good first issue":1},"pull_request_labels_count":{"enhancement":4},"issue_author_associations_count":{"NONE":10,"MEMBER":3},"pull_request_author_associations_count":{"MEMBER":7,"CONTRIBUTOR":6,"NONE":2},"issue_authors":{"MeeMaster":5,"crdrisko":3,"elfring":3,"srmnitc":1,"cirosantilli":1},"pull_request_authors":{"crdrisko":5,"jmichalka":3,"hsidky":2,"mvala":2,"gezelter":1,"Hemanta-Bhattarai":1,"serval2412":1},"host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-02T00:00:07.986Z","repositories_count":10042729,"issues_count":30645220,"pull_requests_count":91402388,"authors_count":10443886,"icon_url":"https://github.com/github.png","host_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories","owners_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/owners","authors_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors"},"past_year_issue_labels_count":{"enhancement":1},"past_year_pull_request_labels_count":{"enhancement":2},"past_year_issue_author_associations_count":{"NONE":1},"past_year_pull_request_author_associations_count":{"MEMBER":2},"past_year_issue_authors":{"srmnitc":1},"past_year_pull_request_authors":{"crdrisko":2},"maintainers":[{"login":"crdrisko","count":8,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/crdrisko"},{"login":"gezelter","count":1,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/gezelter"},{"login":"Hemanta-Bhattarai","count":1,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/Hemanta-Bhattarai"}],"active_maintainers":[{"login":"crdrisko","count":2,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/crdrisko"}]},"events":{"total":{"CreateEvent":1,"IssuesEvent":2,"ReleaseEvent":1,"WatchEvent":5,"DeleteEvent":1,"IssueCommentEvent":1,"PushEvent":23,"ForkEvent":1},"last_year":{"CreateEvent":1,"IssuesEvent":2,"ReleaseEvent":1,"WatchEvent":5,"DeleteEvent":1,"IssueCommentEvent":1,"PushEvent":23,"ForkEvent":1}},"keywords":[],"dependencies":[{"ecosystem":"actions","filepath":".github/workflows/build.yml","sha":null,"kind":"manifest","created_at":"2023-01-14T14:30:45.341Z","updated_at":"2023-01-14T14:30:45.341Z","repository_link":"https://github.com/OpenMD/OpenMD/blob/main/.github/workflows/build.yml","dependencies":[{"id":6898836632,"package_name":"actions/checkout","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false}]}],"score":8.029758520440822,"created_at":"2025-09-04T09:17:34.655Z","updated_at":"2025-10-07T08:04:24.960Z","avatar_url":"https://github.com/OpenMD.png","language":"C++","category":"Scientific Software","sub_category":"Peer-reviewed","monthly_downloads":0,"funding_links":[],"readme_doi_urls":["https://doi.org/10.5281/zenodo.13953130"],"works":{},"citation_counts":{},"total_citations":0,"keywords_from_contributors":[],"project_url":"https://science.ecosyste.ms/api/v1/projects/421","html_url":"https://science.ecosyste.ms/projects/421","bibtex_url":"https://science.ecosyste.ms/projects/421/export.bibtex","apalike_url":"https://science.ecosyste.ms/projects/421/export.apalike"}