{"id":43162,"name":"pocpbenchmark","description":"Nextflow workflow for benchmarking proteins alignment tools for improved genus delineation using the Percentage Of Conserved Proteins (POCP) ","url":"https://github.com/clavellab/pocpbenchmark","last_synced_at":"2025-09-05T09:42:27.443Z","repository":{"id":283478365,"uuid":"943330528","full_name":"ClavelLab/pocpbenchmark","owner":"ClavelLab","description":"Nextflow workflow for benchmarking proteins alignment tools for improved genus delineation using the Percentage Of Conserved Proteins (POCP) ","archived":false,"fork":false,"pushed_at":"2025-03-20T12:18:32.000Z","size":2207,"stargazers_count":0,"open_issues_count":0,"forks_count":0,"subscribers_count":1,"default_branch":"master","last_synced_at":"2025-06-02T02:19:34.950Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":"","language":"Nextflow","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"mit","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/ClavelLab.png","metadata":{"files":{"readme":"README.md","changelog":"CHANGELOG.md","contributing":".github/CONTRIBUTING.md","funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":"CITATION.cff","codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null}},"created_at":"2025-03-05T14:35:46.000Z","updated_at":"2025-03-20T12:18:36.000Z","dependencies_parsed_at":null,"dependency_job_id":"bbc32b41-c1d4-4436-baeb-6b9a90afb5c0","html_url":"https://github.com/ClavelLab/pocpbenchmark","commit_stats":null,"previous_names":["clavellab/pocpbenchmark"],"tags_count":1,"template":false,"template_full_name":null,"purl":"pkg:github/ClavelLab/pocpbenchmark","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ClavelLab%2Fpocpbenchmark","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ClavelLab%2Fpocpbenchmark/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ClavelLab%2Fpocpbenchmark/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ClavelLab%2Fpocpbenchmark/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/ClavelLab","download_url":"https://codeload.github.com/ClavelLab/pocpbenchmark/tar.gz/refs/heads/master","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ClavelLab%2Fpocpbenchmark/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":273740115,"owners_count":25159429,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-09-05T02:00:09.113Z","response_time":402,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"owner":{"login":"ClavelLab","name":"The Clavel lab","uuid":"99190958","kind":"organization","description":"This is the official GitHub account for the research group of Prof. Thomas Clavel.","email":null,"website":"https://www.ukaachen.de/kliniken-institute/institut-fuer-medizinische-mikrobiologie/forschung/ag-clavel/","location":"Germany","twitter":"clavellab","company":null,"icon_url":"https://avatars.githubusercontent.com/u/99190958?v=4","repositories_count":1,"last_synced_at":"2023-04-05T13:30:58.446Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/ClavelLab","funding_links":[],"total_stars":null,"followers":null,"following":null,"created_at":"2023-04-05T13:30:58.451Z","updated_at":"2023-04-05T13:30:58.451Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/ClavelLab","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/ClavelLab/repositories"},"packages":[],"commits":{"id":9349351,"full_name":"clavellab/pocpbenchmark","default_branch":"master","committers":[{"name":"cpauvert","email":"cpauvert","login":"cpauvert","count":88}],"total_commits":88,"total_committers":1,"total_bot_commits":0,"total_bot_committers":0,"mean_commits":88.0,"dds":0.0,"past_year_committers":[{"name":"Charlie Pauvert","email":"cpauvert","login":"cpauvert","count":4}],"past_year_total_commits":4,"past_year_total_committers":1,"past_year_total_bot_commits":0,"past_year_total_bot_committers":0,"past_year_mean_commits":4.0,"past_year_dds":0.0,"last_synced_at":"2025-06-08T16:05:41.776Z","last_synced_commit":"b37f4356d21468fa65f4a81edd7af0ed118d87fa","created_at":"2025-03-27T01:19:59.219Z","updated_at":"2025-06-08T16:05:41.777Z","commits_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories/clavellab%2Fpocpbenchmark/commits","host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-05T00:00:10.343Z","repositories_count":5480019,"commits_count":853389012,"contributors_count":31098138,"owners_count":906558,"icon_url":"https://github.com/github.png","host_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories"}},"issues_stats":{"full_name":"clavellab/pocpbenchmark","html_url":"https://github.com/clavellab/pocpbenchmark","last_synced_at":"2025-06-01T17:33:36.328Z","status":null,"issues_count":0,"pull_requests_count":0,"avg_time_to_close_issue":null,"avg_time_to_close_pull_request":null,"issues_closed_count":0,"pull_requests_closed_count":0,"pull_request_authors_count":0,"issue_authors_count":0,"avg_comments_per_issue":null,"avg_comments_per_pull_request":null,"merged_pull_requests_count":0,"bot_issues_count":0,"bot_pull_requests_count":0,"past_year_issues_count":0,"past_year_pull_requests_count":0,"past_year_avg_time_to_close_issue":null,"past_year_avg_time_to_close_pull_request":null,"past_year_issues_closed_count":0,"past_year_pull_requests_closed_count":0,"past_year_pull_request_authors_count":0,"past_year_issue_authors_count":0,"past_year_avg_comments_per_issue":null,"past_year_avg_comments_per_pull_request":null,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":0,"created_at":"2025-03-27T01:20:00.458Z","updated_at":"2025-06-01T17:33:36.328Z","repository_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/clavellab%2Fpocpbenchmark","issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/clavellab%2Fpocpbenchmark/issues","issue_labels_count":{},"pull_request_labels_count":{},"issue_author_associations_count":{},"pull_request_author_associations_count":{},"issue_authors":{},"pull_request_authors":{},"host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-05T00:00:10.444Z","repositories_count":10095926,"issues_count":31397479,"pull_requests_count":97150418,"authors_count":10700329,"icon_url":"https://github.com/github.png","host_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories","owners_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/owners","authors_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors"},"past_year_issue_labels_count":{},"past_year_pull_request_labels_count":{},"past_year_issue_author_associations_count":{},"past_year_pull_request_author_associations_count":{},"past_year_issue_authors":{},"past_year_pull_request_authors":{},"maintainers":[],"active_maintainers":[]},"events":{"total":{"PushEvent":1},"last_year":{"PushEvent":1}},"keywords":[],"dependencies":[],"score":null,"created_at":"2025-09-04T15:51:18.173Z","updated_at":"2025-10-07T08:17:30.441Z","avatar_url":"https://github.com/ClavelLab.png","language":"Nextflow","category":null,"sub_category":null,"monthly_downloads":0,"funding_links":[],"readme_doi_urls":["https://doi.org/10.1128/JB.01688-14","https://doi.org/10.1101/2025.03.17.643616","https://doi.org/10.5281/zenodo.14974869","https://dx.doi.org/10.1038/s41587-020-0439-x"],"works":{},"citation_counts":{},"total_citations":0,"keywords_from_contributors":[],"project_url":"https://science.ecosyste.ms/api/v1/projects/43162","html_url":"https://science.ecosyste.ms/projects/43162","bibtex_url":"https://science.ecosyste.ms/projects/43162/export.bibtex","apalike_url":"https://science.ecosyste.ms/projects/43162/export.apalike"}