{"id":45790,"name":"djw-dna_pipe","description":null,"url":"https://github.com/djwight/djw-dna_pipe","last_synced_at":"2025-09-08T11:55:03.010Z","repository":{"id":277907787,"uuid":"933881214","full_name":"djwight/djw-dna_pipe","owner":"djwight","description":null,"archived":false,"fork":false,"pushed_at":"2025-02-16T22:21:48.000Z","size":60,"stargazers_count":0,"open_issues_count":0,"forks_count":0,"subscribers_count":1,"default_branch":"master","last_synced_at":"2025-09-05T17:24:12.661Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":null,"language":"Nextflow","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":null,"status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/djwight.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":".github/CONTRIBUTING.md","funding":null,"license":null,"code_of_conduct":null,"threat_model":null,"audit":null,"citation":"CITATIONS.md","codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2025-02-16T22:17:32.000Z","updated_at":"2025-02-16T22:21:51.000Z","dependencies_parsed_at":"2025-02-16T23:24:25.549Z","dependency_job_id":"108cd727-38f4-4650-b088-453cf440c18a","html_url":"https://github.com/djwight/djw-dna_pipe","commit_stats":null,"previous_names":["djwight/djw-dna_pipe"],"tags_count":0,"template":false,"template_full_name":null,"purl":"pkg:github/djwight/djw-dna_pipe","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/djwight%2Fdjw-dna_pipe","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/djwight%2Fdjw-dna_pipe/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/djwight%2Fdjw-dna_pipe/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/djwight%2Fdjw-dna_pipe/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/djwight","download_url":"https://codeload.github.com/djwight/djw-dna_pipe/tar.gz/refs/heads/master","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/djwight%2Fdjw-dna_pipe/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":274181393,"owners_count":25236549,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-09-08T02:00:09.813Z","response_time":121,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"owner":{"login":"djwight","name":"Darren Wight","uuid":"51029384","kind":"user","description":"Bioinformatics scientist and programmer.","email":"","website":null,"location":"Berlin","twitter":null,"company":null,"icon_url":"https://avatars.githubusercontent.com/u/51029384?u=d5130843b8d039f37b15c1dbf4def750dba576d9\u0026v=4","repositories_count":1,"last_synced_at":"2023-08-31T11:30:55.873Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/djwight","funding_links":[],"total_stars":null,"followers":null,"following":null,"created_at":"2023-08-31T11:30:55.886Z","updated_at":"2023-08-31T11:30:55.886Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/djwight","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/djwight/repositories"},"packages":[],"commits":{"id":10940668,"full_name":"djwight/djw-dna_pipe","default_branch":"master","committers":null,"total_commits":null,"total_committers":null,"total_bot_commits":null,"total_bot_committers":null,"mean_commits":null,"dds":null,"past_year_committers":null,"past_year_total_commits":null,"past_year_total_committers":null,"past_year_total_bot_commits":null,"past_year_total_bot_committers":null,"past_year_mean_commits":null,"past_year_dds":null,"last_synced_at":null,"last_synced_commit":null,"created_at":"2025-09-05T10:32:24.667Z","updated_at":"2025-09-05T10:32:24.667Z","commits_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories/djwight%2Fdjw-dna_pipe/commits","host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-08T00:00:16.827Z","repositories_count":5482481,"commits_count":853982201,"contributors_count":31119904,"owners_count":907868,"icon_url":"https://github.com/github.png","host_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories"}},"issues_stats":{"full_name":"djwight/djw-dna_pipe","html_url":"https://github.com/djwight/djw-dna_pipe","last_synced_at":null,"status":null,"issues_count":null,"pull_requests_count":null,"avg_time_to_close_issue":null,"avg_time_to_close_pull_request":null,"issues_closed_count":null,"pull_requests_closed_count":null,"pull_request_authors_count":null,"issue_authors_count":null,"avg_comments_per_issue":null,"avg_comments_per_pull_request":null,"merged_pull_requests_count":null,"bot_issues_count":null,"bot_pull_requests_count":null,"past_year_issues_count":null,"past_year_pull_requests_count":null,"past_year_avg_time_to_close_issue":null,"past_year_avg_time_to_close_pull_request":null,"past_year_issues_closed_count":null,"past_year_pull_requests_closed_count":null,"past_year_pull_request_authors_count":null,"past_year_issue_authors_count":null,"past_year_avg_comments_per_issue":null,"past_year_avg_comments_per_pull_request":null,"past_year_bot_issues_count":null,"past_year_bot_pull_requests_count":null,"past_year_merged_pull_requests_count":null,"created_at":"2025-09-05T10:32:36.087Z","updated_at":"2025-09-05T10:32:36.087Z","repository_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/djwight%2Fdjw-dna_pipe","issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/djwight%2Fdjw-dna_pipe/issues","issue_labels_count":{},"pull_request_labels_count":{},"issue_author_associations_count":{},"pull_request_author_associations_count":{},"issue_authors":{},"pull_request_authors":{},"host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-05T00:00:10.444Z","repositories_count":10097320,"issues_count":31426573,"pull_requests_count":97235070,"authors_count":10701179,"icon_url":"https://github.com/github.png","host_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories","owners_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/owners","authors_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors"},"past_year_issue_labels_count":{},"past_year_pull_request_labels_count":{},"past_year_issue_author_associations_count":{},"past_year_pull_request_author_associations_count":{},"past_year_issue_authors":{},"past_year_pull_request_authors":{},"maintainers":[],"active_maintainers":[]},"events":{"total":{"PushEvent":1,"CreateEvent":2},"last_year":{"PushEvent":1,"CreateEvent":2}},"keywords":[],"dependencies":[{"ecosystem":"cpan","filepath":"modules/nf-core/bwamem2/index/meta.yml","sha":null,"kind":"manifest","created_at":"2025-02-16T23:24:24.606Z","updated_at":"2025-02-16T23:24:24.606Z","repository_link":"https://github.com/djwight/djw-dna_pipe/blob/master/modules/nf-core/bwamem2/index/meta.yml","dependencies":[]},{"ecosystem":"cpan","filepath":"modules/nf-core/bwamem2/mem/meta.yml","sha":null,"kind":"manifest","created_at":"2025-02-16T23:24:24.650Z","updated_at":"2025-02-16T23:24:24.650Z","repository_link":"https://github.com/djwight/djw-dna_pipe/blob/master/modules/nf-core/bwamem2/mem/meta.yml","dependencies":[]},{"ecosystem":"cpan","filepath":"modules/nf-core/fastp/meta.yml","sha":null,"kind":"manifest","created_at":"2025-02-16T23:24:24.694Z","updated_at":"2025-02-16T23:24:24.694Z","repository_link":"https://github.com/djwight/djw-dna_pipe/blob/master/modules/nf-core/fastp/meta.yml","dependencies":[]},{"ecosystem":"cpan","filepath":"modules/nf-core/fastqc/meta.yml","sha":null,"kind":"manifest","created_at":"2025-02-16T23:24:24.742Z","updated_at":"2025-02-16T23:24:24.742Z","repository_link":"https://github.com/djwight/djw-dna_pipe/blob/master/modules/nf-core/fastqc/meta.yml","dependencies":[]},{"ecosystem":"cpan","filepath":"modules/nf-core/multiqc/meta.yml","sha":null,"kind":"manifest","created_at":"2025-02-16T23:24:24.789Z","updated_at":"2025-02-16T23:24:24.789Z","repository_link":"https://github.com/djwight/djw-dna_pipe/blob/master/modules/nf-core/multiqc/meta.yml","dependencies":[]},{"ecosystem":"cpan","filepath":"subworkflows/nf-core/utils_nextflow_pipeline/meta.yml","sha":null,"kind":"manifest","created_at":"2025-02-16T23:24:24.849Z","updated_at":"2025-02-16T23:24:24.849Z","repository_link":"https://github.com/djwight/djw-dna_pipe/blob/master/subworkflows/nf-core/utils_nextflow_pipeline/meta.yml","dependencies":[]},{"ecosystem":"cpan","filepath":"subworkflows/nf-core/utils_nfcore_pipeline/meta.yml","sha":null,"kind":"manifest","created_at":"2025-02-16T23:24:24.910Z","updated_at":"2025-02-16T23:24:24.910Z","repository_link":"https://github.com/djwight/djw-dna_pipe/blob/master/subworkflows/nf-core/utils_nfcore_pipeline/meta.yml","dependencies":[]},{"ecosystem":"cpan","filepath":"subworkflows/nf-core/utils_nfschema_plugin/meta.yml","sha":null,"kind":"manifest","created_at":"2025-02-16T23:24:24.954Z","updated_at":"2025-02-16T23:24:24.954Z","repository_link":"https://github.com/djwight/djw-dna_pipe/blob/master/subworkflows/nf-core/utils_nfschema_plugin/meta.yml","dependencies":[]},{"ecosystem":"pypi","filepath":"modules/nf-core/bwamem2/index/environment.yml","sha":null,"kind":"manifest","created_at":"2025-02-16T23:24:24.999Z","updated_at":"2025-02-16T23:24:24.999Z","repository_link":"https://github.com/djwight/djw-dna_pipe/blob/master/modules/nf-core/bwamem2/index/environment.yml","dependencies":[]},{"ecosystem":"pypi","filepath":"modules/nf-core/bwamem2/mem/environment.yml","sha":null,"kind":"manifest","created_at":"2025-02-16T23:24:25.042Z","updated_at":"2025-02-16T23:24:25.042Z","repository_link":"https://github.com/djwight/djw-dna_pipe/blob/master/modules/nf-core/bwamem2/mem/environment.yml","dependencies":[]},{"ecosystem":"pypi","filepath":"modules/nf-core/fastp/environment.yml","sha":null,"kind":"manifest","created_at":"2025-02-16T23:24:25.086Z","updated_at":"2025-02-16T23:24:25.086Z","repository_link":"https://github.com/djwight/djw-dna_pipe/blob/master/modules/nf-core/fastp/environment.yml","dependencies":[]},{"ecosystem":"pypi","filepath":"modules/nf-core/fastqc/environment.yml","sha":null,"kind":"manifest","created_at":"2025-02-16T23:24:25.142Z","updated_at":"2025-02-16T23:24:25.142Z","repository_link":"https://github.com/djwight/djw-dna_pipe/blob/master/modules/nf-core/fastqc/environment.yml","dependencies":[]},{"ecosystem":"pypi","filepath":"modules/nf-core/multiqc/environment.yml","sha":null,"kind":"manifest","created_at":"2025-02-16T23:24:25.186Z","updated_at":"2025-02-16T23:24:25.186Z","repository_link":"https://github.com/djwight/djw-dna_pipe/blob/master/modules/nf-core/multiqc/environment.yml","dependencies":[]}],"score":null,"created_at":"2025-09-04T15:51:21.222Z","updated_at":"2025-10-07T08:18:18.967Z","avatar_url":"https://github.com/djwight.png","language":"Nextflow","category":null,"sub_category":null,"monthly_downloads":0,"funding_links":[],"readme_doi_urls":["https://doi.org/10.5281/zenodo.XXXXXXX","https://doi.org/10.5281/zenodo.XXXXXX","https://dx.doi.org/10.1038/s41587-020-0439-x"],"works":{},"citation_counts":{},"total_citations":0,"keywords_from_contributors":[],"project_url":"https://science.ecosyste.ms/api/v1/projects/45790","html_url":"https://science.ecosyste.ms/projects/45790","bibtex_url":"https://science.ecosyste.ms/projects/45790/export.bibtex","apalike_url":"https://science.ecosyste.ms/projects/45790/export.apalike"}