{"id":4613,"name":"spotiflow","description":"Accurate and efficient spot detection for microscopy data","url":"https://github.com/weigertlab/spotiflow","last_synced_at":"2025-09-04T17:27:39.564Z","repository":{"id":220551440,"uuid":"751952101","full_name":"weigertlab/spotiflow","owner":"weigertlab","description":"Accurate and efficient spot detection for microscopy data","archived":false,"fork":false,"pushed_at":"2025-08-13T15:51:13.000Z","size":25084,"stargazers_count":95,"open_issues_count":6,"forks_count":12,"subscribers_count":4,"default_branch":"main","last_synced_at":"2025-09-01T07:20:37.891Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":"https://weigertlab.github.io/spotiflow/","language":"Python","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"bsd-3-clause","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/weigertlab.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":"CITATION.cff","codeowners":".github/CODEOWNERS","security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null}},"created_at":"2024-02-02T17:28:25.000Z","updated_at":"2025-08-19T12:15:42.000Z","dependencies_parsed_at":"2024-05-09T16:31:37.922Z","dependency_job_id":"231ffd8b-b38d-404a-b6d9-46c43ce50dd1","html_url":"https://github.com/weigertlab/spotiflow","commit_stats":null,"previous_names":["weigertlab/spotiflow"],"tags_count":21,"template":false,"template_full_name":null,"purl":"pkg:github/weigertlab/spotiflow","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/weigertlab%2Fspotiflow","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/weigertlab%2Fspotiflow/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/weigertlab%2Fspotiflow/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/weigertlab%2Fspotiflow/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/weigertlab","download_url":"https://codeload.github.com/weigertlab/spotiflow/tar.gz/refs/heads/main","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/weigertlab%2Fspotiflow/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":273643203,"owners_count":25142565,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-09-04T02:00:08.968Z","response_time":61,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"owner":{"login":"weigertlab","name":"weigertlab","uuid":"85626606","kind":"organization","description":null,"email":null,"website":null,"location":null,"twitter":null,"company":null,"icon_url":"https://avatars.githubusercontent.com/u/85626606?v=4","repositories_count":2,"last_synced_at":"2023-03-05T10:19:26.852Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/weigertlab","funding_links":[],"total_stars":null,"followers":null,"following":null,"created_at":"2023-03-05T10:19:26.865Z","updated_at":"2023-03-05T10:19:26.865Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/weigertlab","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/weigertlab/repositories"},"packages":[{"id":8656408,"name":"spotiflow","ecosystem":"pypi","description":"Accurate and efficient spot detection for microscopy data","homepage":null,"licenses":"BSD 3-Clause License","normalized_licenses":["BSD-1-Clause"],"repository_url":"https://github.com/weigertlab/spotiflow","keywords_array":[],"namespace":null,"versions_count":22,"first_release_published_at":"2023-12-19T17:58:05.000Z","latest_release_published_at":"2025-07-31T12:24:50.000Z","latest_release_number":"0.5.8","last_synced_at":"2025-09-01T06:33:42.366Z","created_at":"2023-12-19T18:02:44.661Z","updated_at":"2025-09-01T06:40:00.661Z","registry_url":"https://pypi.org/project/spotiflow/","install_command":"pip install spotiflow --index-url https://pypi.org/simple","documentation_url":"https://spotiflow.readthedocs.io/","metadata":{"funding":null,"documentation":null,"classifiers":["Development Status :: 4 - Beta","Intended Audience :: Science/Research","License :: OSI Approved :: BSD License","Programming Language :: Python :: 3.10","Programming Language :: Python :: 3.11","Programming Language :: Python :: 3.12","Programming Language :: Python :: 3.13","Programming Language :: Python :: 3.9","Topic :: Scientific/Engineering"],"normalized_name":"spotiflow","project_status":null},"repo_metadata":{"id":220551440,"uuid":"751952101","full_name":"weigertlab/spotiflow","owner":"weigertlab","description":"Accurate and efficient spot detection for microscopy data","archived":false,"fork":false,"pushed_at":"2025-07-31T12:27:30.000Z","size":25074,"stargazers_count":92,"open_issues_count":6,"forks_count":12,"subscribers_count":4,"default_branch":"main","last_synced_at":"2025-07-31T14:42:48.001Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":"https://weigertlab.github.io/spotiflow/","language":"Python","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"bsd-3-clause","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/weigertlab.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":"CITATION.cff","codeowners":".github/CODEOWNERS","security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null}},"created_at":"2024-02-02T17:28:25.000Z","updated_at":"2025-07-31T12:16:10.000Z","dependencies_parsed_at":"2024-05-09T16:31:37.922Z","dependency_job_id":"231ffd8b-b38d-404a-b6d9-46c43ce50dd1","html_url":"https://github.com/weigertlab/spotiflow","commit_stats":null,"previous_names":["weigertlab/spotiflow"],"tags_count":21,"template":false,"template_full_name":null,"purl":"pkg:github/weigertlab/spotiflow","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/weigertlab%2Fspotiflow","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/weigertlab%2Fspotiflow/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/weigertlab%2Fspotiflow/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/weigertlab%2Fspotiflow/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/weigertlab","download_url":"https://codeload.github.com/weigertlab/spotiflow/tar.gz/refs/heads/main","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/weigertlab%2Fspotiflow/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":273082444,"owners_count":25042284,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-09-01T02:00:09.058Z","response_time":120,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"},"owner_record":{"login":"weigertlab","name":"weigertlab","uuid":"85626606","kind":"organization","description":null,"email":null,"website":null,"location":null,"twitter":null,"company":null,"icon_url":"https://avatars.githubusercontent.com/u/85626606?v=4","repositories_count":2,"last_synced_at":"2023-03-05T10:19:26.852Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/weigertlab","funding_links":[],"total_stars":null,"followers":null,"following":null,"created_at":"2023-03-05T10:19:26.865Z","updated_at":"2023-03-05T10:19:26.865Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/weigertlab","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/weigertlab/repositories"},"tags":[{"name":"0.5.8","sha":"a3d1acb549f1c9c6358c3d81edc030b1429b52f3","kind":"commit","published_at":"2025-07-31T12:16:06.000Z","download_url":"https://codeload.github.com/weigertlab/spotiflow/tar.gz/0.5.8","html_url":"https://github.com/weigertlab/spotiflow/releases/tag/0.5.8","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/weigertlab/spotiflow@0.5.8","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/weigertlab%2Fspotiflow/tags/0.5.8","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/weigertlab%2Fspotiflow/tags/0.5.8/manifests"},{"name":"0.5.7","sha":"19482d51fc9210230fa4fc4bfb4c8fbd86d606ad","kind":"commit","published_at":"2025-06-09T18:10:42.000Z","download_url":"https://codeload.github.com/weigertlab/spotiflow/tar.gz/0.5.7","html_url":"https://github.com/weigertlab/spotiflow/releases/tag/0.5.7","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/weigertlab/spotiflow@0.5.7","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/weigertlab%2Fspotiflow/tags/0.5.7","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/weigertlab%2Fspotiflow/tags/0.5.7/manifests"},{"name":"0.5.6","sha":"987812b3f6404527fa7038c7d03a8d43710d044b","kind":"commit","published_at":"2025-06-06T08:29:03.000Z","download_url":"https://codeload.github.com/weigertlab/spotiflow/tar.gz/0.5.6","html_url":"https://github.com/weigertlab/spotiflow/releases/tag/0.5.6","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/weigertlab/spotiflow@0.5.6","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/weigertlab%2Fspotiflow/tags/0.5.6","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/weigertlab%2Fspotiflow/tags/0.5.6/manifests"},{"name":"0.5.5","sha":"e75344c730de236957266c6160e11d26e1edde38","kind":"commit","published_at":"2025-05-22T11:13:46.000Z","download_url":"https://codeload.github.com/weigertlab/spotiflow/tar.gz/0.5.5","html_url":"https://github.com/weigertlab/spotiflow/releases/tag/0.5.5","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/weigertlab/spotiflow@0.5.5","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/weigertlab%2Fspotiflow/tags/0.5.5","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/weigertlab%2Fspotiflow/tags/0.5.5/manifests"},{"name":"0.5.4","sha":"bcded6f24932d588064da18e4f361835f193603e","kind":"commit","published_at":"2025-03-04T21:18:15.000Z","download_url":"https://codeload.github.com/weigertlab/spotiflow/tar.gz/0.5.4","html_url":"https://github.com/weigertlab/spotiflow/releases/tag/0.5.4","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/weigertlab/spotiflow@0.5.4","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/weigertlab%2Fspotiflow/tags/0.5.4","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/weigertlab%2Fspotiflow/tags/0.5.4/manifests"},{"name":"0.5.3","sha":"7f1a3ec413eca1bbb1857a5b2e05b8695222a6c5","kind":"commit","published_at":"2025-02-28T17:54:46.000Z","download_url":"https://codeload.github.com/weigertlab/spotiflow/tar.gz/0.5.3","html_url":"https://github.com/weigertlab/spotiflow/releases/tag/0.5.3","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/weigertlab/spotiflow@0.5.3","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/weigertlab%2Fspotiflow/tags/0.5.3","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/weigertlab%2Fspotiflow/tags/0.5.3/manifests"},{"name":"0.5.2","sha":"795d738a9b8a7efe534098c28d08d9cc12f6cdba","kind":"commit","published_at":"2024-12-18T22:43:11.000Z","download_url":"https://codeload.github.com/weigertlab/spotiflow/tar.gz/0.5.2","html_url":"https://github.com/weigertlab/spotiflow/releases/tag/0.5.2","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/weigertlab/spotiflow@0.5.2","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/weigertlab%2Fspotiflow/tags/0.5.2","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/weigertlab%2Fspotiflow/tags/0.5.2/manifests"},{"name":"0.5.1","sha":"86af2a39165861104e829f5c7efc1f188686622e","kind":"commit","published_at":"2024-11-22T17:03:16.000Z","download_url":"https://codeload.github.com/weigertlab/spotiflow/tar.gz/0.5.1","html_url":"https://github.com/weigertlab/spotiflow/releases/tag/0.5.1","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/weigertlab/spotiflow@0.5.1","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/weigertlab%2Fspotiflow/tags/0.5.1","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/weigertlab%2Fspotiflow/tags/0.5.1/manifests"},{"name":"0.5.0","sha":"61909e9d622e15d4d210c8838a5bc0fe3430c397","kind":"commit","published_at":"2024-10-15T15:43:04.000Z","download_url":"https://codeload.github.com/weigertlab/spotiflow/tar.gz/0.5.0","html_url":"https://github.com/weigertlab/spotiflow/releases/tag/0.5.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/weigertlab/spotiflow@0.5.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/weigertlab%2Fspotiflow/tags/0.5.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/weigertlab%2Fspotiflow/tags/0.5.0/manifests"},{"name":"0.4.5","sha":"cf5d24493322ec9f4d86ea28bef64dee42bed986","kind":"commit","published_at":"2024-10-07T17:58:59.000Z","download_url":"https://codeload.github.com/weigertlab/spotiflow/tar.gz/0.4.5","html_url":"https://github.com/weigertlab/spotiflow/releases/tag/0.4.5","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/weigertlab/spotiflow@0.4.5","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/weigertlab%2Fspotiflow/tags/0.4.5","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/weigertlab%2Fspotiflow/tags/0.4.5/manifests"},{"name":"0.4.4","sha":"852620400307feac5a7874356c617804bd28c7c1","kind":"commit","published_at":"2024-10-07T15:28:49.000Z","download_url":"https://codeload.github.com/weigertlab/spotiflow/tar.gz/0.4.4","html_url":"https://github.com/weigertlab/spotiflow/releases/tag/0.4.4","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/weigertlab/spotiflow@0.4.4","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/weigertlab%2Fspotiflow/tags/0.4.4","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/weigertlab%2Fspotiflow/tags/0.4.4/manifests"},{"name":"0.4.3","sha":"7722cbee57a65285942245c27f1c9600bcea8c92","kind":"commit","published_at":"2024-10-02T14:43:14.000Z","download_url":"https://codeload.github.com/weigertlab/spotiflow/tar.gz/0.4.3","html_url":"https://github.com/weigertlab/spotiflow/releases/tag/0.4.3","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/weigertlab/spotiflow@0.4.3","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/weigertlab%2Fspotiflow/tags/0.4.3","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/weigertlab%2Fspotiflow/tags/0.4.3/manifests"},{"name":"0.4.2","sha":"e46d463ec699160cd73133cef75db1246b313d9c","kind":"commit","published_at":"2024-09-06T15:00:03.000Z","download_url":"https://codeload.github.com/weigertlab/spotiflow/tar.gz/0.4.2","html_url":"https://github.com/weigertlab/spotiflow/releases/tag/0.4.2","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/weigertlab/spotiflow@0.4.2","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/weigertlab%2Fspotiflow/tags/0.4.2","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/weigertlab%2Fspotiflow/tags/0.4.2/manifests"},{"name":"0.4.1","sha":"fef3a764de593ba351d06cdc04a7524b27e13294","kind":"commit","published_at":"2024-08-29T13:38:30.000Z","download_url":"https://codeload.github.com/weigertlab/spotiflow/tar.gz/0.4.1","html_url":"https://github.com/weigertlab/spotiflow/releases/tag/0.4.1","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/weigertlab/spotiflow@0.4.1","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/weigertlab%2Fspotiflow/tags/0.4.1","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/weigertlab%2Fspotiflow/tags/0.4.1/manifests"},{"name":"0.4.0","sha":"b901fd2541d53fdac7c217d4fbba14a05b2d4943","kind":"commit","published_at":"2024-08-17T11:05:07.000Z","download_url":"https://codeload.github.com/weigertlab/spotiflow/tar.gz/0.4.0","html_url":"https://github.com/weigertlab/spotiflow/releases/tag/0.4.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/weigertlab/spotiflow@0.4.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/weigertlab%2Fspotiflow/tags/0.4.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/weigertlab%2Fspotiflow/tags/0.4.0/manifests"},{"name":"0.3.3","sha":"a26cccd24a718785954992efbff08313a6e09c83","kind":"commit","published_at":"2024-07-09T09:16:43.000Z","download_url":"https://codeload.github.com/weigertlab/spotiflow/tar.gz/0.3.3","html_url":"https://github.com/weigertlab/spotiflow/releases/tag/0.3.3","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/weigertlab/spotiflow@0.3.3","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/weigertlab%2Fspotiflow/tags/0.3.3","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/weigertlab%2Fspotiflow/tags/0.3.3/manifests"},{"name":"0.3.2","sha":"58b1e9989181a002853b3b21a089e6cbda114e4d","kind":"commit","published_at":"2024-06-17T15:46:50.000Z","download_url":"https://codeload.github.com/weigertlab/spotiflow/tar.gz/0.3.2","html_url":"https://github.com/weigertlab/spotiflow/releases/tag/0.3.2","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/weigertlab/spotiflow@0.3.2","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/weigertlab%2Fspotiflow/tags/0.3.2","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/weigertlab%2Fspotiflow/tags/0.3.2/manifests"},{"name":"0.3.1","sha":"84e9d74ef2922594844b03a1029a752576e5e908","kind":"commit","published_at":"2024-06-17T10:00:56.000Z","download_url":"https://codeload.github.com/weigertlab/spotiflow/tar.gz/0.3.1","html_url":"https://github.com/weigertlab/spotiflow/releases/tag/0.3.1","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/weigertlab/spotiflow@0.3.1","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/weigertlab%2Fspotiflow/tags/0.3.1","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/weigertlab%2Fspotiflow/tags/0.3.1/manifests"},{"name":"0.3.0","sha":"35bac9ff45d434d31776f856b5fd17a98acdad95","kind":"commit","published_at":"2024-03-17T16:18:44.000Z","download_url":"https://codeload.github.com/weigertlab/spotiflow/tar.gz/0.3.0","html_url":"https://github.com/weigertlab/spotiflow/releases/tag/0.3.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/weigertlab/spotiflow@0.3.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/weigertlab%2Fspotiflow/tags/0.3.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/weigertlab%2Fspotiflow/tags/0.3.0/manifests"},{"name":"0.2.0","sha":"ec64eecd61fadd7948c967064b2394850c3abc4e","kind":"commit","published_at":"2024-02-08T15:30:16.000Z","download_url":"https://codeload.github.com/weigertlab/spotiflow/tar.gz/0.2.0","html_url":"https://github.com/weigertlab/spotiflow/releases/tag/0.2.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/weigertlab/spotiflow@0.2.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/weigertlab%2Fspotiflow/tags/0.2.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/weigertlab%2Fspotiflow/tags/0.2.0/manifests"},{"name":"0.1.0","sha":"e3c8966055a0c1ed48c9c38c08f117874d6e03fa","kind":"commit","published_at":"2024-02-02T17:54:29.000Z","download_url":"https://codeload.github.com/weigertlab/spotiflow/tar.gz/0.1.0","html_url":"https://github.com/weigertlab/spotiflow/releases/tag/0.1.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/weigertlab/spotiflow@0.1.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/weigertlab%2Fspotiflow/tags/0.1.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/weigertlab%2Fspotiflow/tags/0.1.0/manifests"}]},"repo_metadata_updated_at":"2025-09-01T06:40:00.661Z","dependent_packages_count":1,"downloads":1386,"downloads_period":"last-month","dependent_repos_count":0,"rankings":{"downloads":null,"dependent_repos_count":66.84682262087145,"dependent_packages_count":10.126134175868486,"stargazers_count":null,"forks_count":null,"docker_downloads_count":null,"average":38.48647839836997},"purl":"pkg:pypi/spotiflow","advisories":[],"docker_usage_url":"https://docker.ecosyste.ms/usage/pypi/spotiflow","docker_dependents_count":null,"docker_downloads_count":null,"usage_url":"https://repos.ecosyste.ms/usage/pypi/spotiflow","dependent_repositories_url":"https://repos.ecosyste.ms/api/v1/usage/pypi/spotiflow/dependencies","status":null,"funding_links":[],"critical":null,"issue_metadata":{"last_synced_at":"2025-08-31T13:56:38.675Z","issues_count":10,"pull_requests_count":4,"avg_time_to_close_issue":933787.7142857143,"avg_time_to_close_pull_request":1011998.6666666666,"issues_closed_count":7,"pull_requests_closed_count":3,"pull_request_authors_count":3,"issue_authors_count":8,"avg_comments_per_issue":1.8,"avg_comments_per_pull_request":0.75,"merged_pull_requests_count":3,"bot_issues_count":0,"bot_pull_requests_count":0,"past_year_issues_count":10,"past_year_pull_requests_count":4,"past_year_avg_time_to_close_issue":933787.7142857143,"past_year_avg_time_to_close_pull_request":1011998.6666666666,"past_year_issues_closed_count":7,"past_year_pull_requests_closed_count":3,"past_year_pull_request_authors_count":3,"past_year_issue_authors_count":8,"past_year_avg_comments_per_issue":1.8,"past_year_avg_comments_per_pull_request":0.75,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":3,"issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/weigertlab%2Fspotiflow/issues","maintainers":[],"active_maintainers":[]},"versions_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/packages/spotiflow/versions","version_numbers_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/packages/spotiflow/version_numbers","dependent_packages_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/packages/spotiflow/dependent_packages","related_packages_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/packages/spotiflow/related_packages","maintainers":[{"uuid":"maweigert","login":"maweigert","name":null,"email":null,"url":null,"packages_count":13,"html_url":"https://pypi.org/user/maweigert/","role":null,"created_at":"2023-12-19T18:09:37.895Z","updated_at":"2023-12-19T18:09:37.895Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/maintainers/maweigert/packages"},{"uuid":"adomi","login":"adomi","name":null,"email":null,"url":null,"packages_count":3,"html_url":"https://pypi.org/user/adomi/","role":null,"created_at":"2023-12-19T18:09:37.754Z","updated_at":"2023-12-19T18:09:37.754Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/maintainers/adomi/packages"}],"registry":{"name":"pypi.org","url":"https://pypi.org","ecosystem":"pypi","default":true,"packages_count":724840,"maintainers_count":308217,"namespaces_count":0,"keywords_count":237984,"github":"pypi","metadata":{"funded_packages_count":50481},"icon_url":"https://github.com/pypi.png","created_at":"2022-04-04T15:19:23.364Z","updated_at":"2025-09-04T05:23:51.177Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/packages","maintainers_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/maintainers","namespaces_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/namespaces"}}],"commits":{"message":"Repository syncing started."},"issues_stats":{"full_name":"weigertlab/spotiflow","html_url":"https://github.com/weigertlab/spotiflow","last_synced_at":"2025-08-31T13:56:38.675Z","status":null,"issues_count":10,"pull_requests_count":4,"avg_time_to_close_issue":933787.7142857143,"avg_time_to_close_pull_request":1011998.6666666666,"issues_closed_count":7,"pull_requests_closed_count":3,"pull_request_authors_count":3,"issue_authors_count":8,"avg_comments_per_issue":1.8,"avg_comments_per_pull_request":0.75,"merged_pull_requests_count":3,"bot_issues_count":0,"bot_pull_requests_count":0,"past_year_issues_count":10,"past_year_pull_requests_count":4,"past_year_avg_time_to_close_issue":933787.7142857143,"past_year_avg_time_to_close_pull_request":1011998.6666666666,"past_year_issues_closed_count":7,"past_year_pull_requests_closed_count":3,"past_year_pull_request_authors_count":3,"past_year_issue_authors_count":8,"past_year_avg_comments_per_issue":1.8,"past_year_avg_comments_per_pull_request":0.75,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":3,"created_at":"2025-08-29T14:31:56.144Z","updated_at":"2025-09-03T03:10:14.385Z","repository_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/weigertlab%2Fspotiflow","issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/weigertlab%2Fspotiflow/issues","issue_labels_count":{},"pull_request_labels_count":{},"issue_author_associations_count":{"NONE":16,"CONTRIBUTOR":9},"pull_request_author_associations_count":{"CONTRIBUTOR":8,"NONE":5},"issue_authors":{"ajinkya-kulkarni":4,"migueLib":3,"BioinfoTongLI":2,"Hugo-Blanc":2,"ElpadoCan":2,"JoOkuma":2,"JB-Git-15":1,"psobolewskiPhD":1,"AntoineB210":1,"Yiijee":1,"SebastienTs":1,"bbrence":1,"anwai98":1,"qin-yu":1,"chengarthur":1,"lfra":1},"pull_request_authors":{"ajinkya-kulkarni":5,"maweigert":3,"qin-yu":2,"Buglakova":1,"migueLib":1,"anwai98":1},"host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-04T00:00:25.939Z","repositories_count":10079913,"issues_count":31291083,"pull_requests_count":96059117,"authors_count":10693123,"icon_url":"https://github.com/github.png","host_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories","owners_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/owners","authors_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors"},"past_year_issue_labels_count":{},"past_year_pull_request_labels_count":{},"past_year_issue_author_associations_count":{"NONE":15,"CONTRIBUTOR":3},"past_year_pull_request_author_associations_count":{"CONTRIBUTOR":4,"NONE":2},"past_year_issue_authors":{"BioinfoTongLI":2,"ElpadoCan":2,"Hugo-Blanc":2,"JoOkuma":2,"ajinkya-kulkarni":1,"AntoineB210":1,"anwai98":1,"bbrence":1,"chengarthur":1,"JB-Git-15":1,"psobolewskiPhD":1,"qin-yu":1,"SebastienTs":1,"Yiijee":1},"past_year_pull_request_authors":{"maweigert":3,"qin-yu":2,"anwai98":1},"maintainers":[],"active_maintainers":[]},"events":{"total":{"CreateEvent":12,"IssuesEvent":23,"ReleaseEvent":11,"WatchEvent":32,"DeleteEvent":8,"IssueCommentEvent":51,"PushEvent":63,"PullRequestReviewEvent":4,"PullRequestReviewCommentEvent":2,"PullRequestEvent":8,"ForkEvent":4},"last_year":{"CreateEvent":12,"IssuesEvent":23,"ReleaseEvent":11,"WatchEvent":32,"DeleteEvent":8,"IssueCommentEvent":51,"PushEvent":63,"PullRequestReviewEvent":4,"PullRequestReviewCommentEvent":2,"PullRequestEvent":8,"ForkEvent":4}},"keywords":[],"dependencies":[{"ecosystem":"actions","filepath":".github/workflows/cibuildwheel.yml","sha":null,"kind":"manifest","created_at":"2024-02-02T18:20:25.737Z","updated_at":"2024-02-02T18:20:25.737Z","repository_link":"https://github.com/weigertlab/spotiflow/blob/main/.github/workflows/cibuildwheel.yml","dependencies":[{"id":15992315522,"package_name":"actions/checkout","ecosystem":"actions","requirements":"v3","direct":true,"kind":"composite","optional":false},{"id":15992315523,"package_name":"actions/setup-python","ecosystem":"actions","requirements":"v4","direct":true,"kind":"composite","optional":false},{"id":15992315524,"package_name":"actions/upload-artifact","ecosystem":"actions","requirements":"v3","direct":true,"kind":"composite","optional":false},{"id":15992315525,"package_name":"actions/download-artifact","ecosystem":"actions","requirements":"v3","direct":true,"kind":"composite","optional":false},{"id":15992315526,"package_name":"pypa/gh-action-pypi-publish","ecosystem":"actions","requirements":"release/v1","direct":true,"kind":"composite","optional":false}]},{"ecosystem":"actions","filepath":".github/workflows/docs.yaml","sha":null,"kind":"manifest","created_at":"2024-02-02T18:20:25.755Z","updated_at":"2024-02-02T18:20:25.755Z","repository_link":"https://github.com/weigertlab/spotiflow/blob/main/.github/workflows/docs.yaml","dependencies":[{"id":15992315527,"package_name":"actions/checkout","ecosystem":"actions","requirements":"v3","direct":true,"kind":"composite","optional":false},{"id":15992315528,"package_name":"actions/setup-python","ecosystem":"actions","requirements":"v3","direct":true,"kind":"composite","optional":false},{"id":15992315529,"package_name":"peaceiris/actions-gh-pages","ecosystem":"actions","requirements":"v3","direct":true,"kind":"composite","optional":false}]},{"ecosystem":"pypi","filepath":"pyproject.toml","sha":null,"kind":"manifest","created_at":"2024-02-02T18:20:25.777Z","updated_at":"2024-02-02T18:20:25.777Z","repository_link":"https://github.com/weigertlab/spotiflow/blob/main/pyproject.toml","dependencies":[]},{"ecosystem":"pypi","filepath":"setup.py","sha":null,"kind":"manifest","created_at":"2024-02-02T18:20:25.818Z","updated_at":"2024-02-02T18:20:25.818Z","repository_link":"https://github.com/weigertlab/spotiflow/blob/main/setup.py","dependencies":[]}],"score":null,"created_at":"2025-09-04T15:50:12.154Z","updated_at":"2025-10-07T08:05:07.076Z","avatar_url":"https://github.com/weigertlab.png","language":"Python","category":null,"sub_category":null,"monthly_downloads":1386,"funding_links":[],"readme_doi_urls":["https://doi.org/10.1038/s41592-025-02662-x","https://doi.org/10.1101/2024.02.01.578426"],"works":{},"citation_counts":{},"total_citations":0,"keywords_from_contributors":[],"project_url":"https://science.ecosyste.ms/api/v1/projects/4613","html_url":"https://science.ecosyste.ms/projects/4613","bibtex_url":"https://science.ecosyste.ms/projects/4613/export.bibtex","apalike_url":"https://science.ecosyste.ms/projects/4613/export.apalike"}