{"id":48793,"name":"heartmap","description":null,"url":"https://github.com/tumo505/heartmap","last_synced_at":"2025-09-05T11:32:03.690Z","repository":{"id":305239138,"uuid":"1022337160","full_name":"Tumo505/HeartMap","owner":"Tumo505","description":null,"archived":false,"fork":false,"pushed_at":"2025-08-05T21:31:32.000Z","size":1960,"stargazers_count":1,"open_issues_count":0,"forks_count":0,"subscribers_count":0,"default_branch":"master","last_synced_at":"2025-08-05T23:24:27.676Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":null,"language":"HTML","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"apache-2.0","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/Tumo505.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":"CITATION.cff","codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null}},"created_at":"2025-07-18T21:48:46.000Z","updated_at":"2025-08-05T21:31:36.000Z","dependencies_parsed_at":"2025-07-19T11:13:55.469Z","dependency_job_id":"fdda8a7f-4dc1-47c0-9539-ef9d87f2ef29","html_url":"https://github.com/Tumo505/HeartMap","commit_stats":null,"previous_names":["tumo505/grail-heart-cell-cell-communication","tumo505/heartmap"],"tags_count":2,"template":false,"template_full_name":null,"purl":"pkg:github/Tumo505/HeartMap","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Tumo505%2FHeartMap","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Tumo505%2FHeartMap/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Tumo505%2FHeartMap/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Tumo505%2FHeartMap/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/Tumo505","download_url":"https://codeload.github.com/Tumo505/HeartMap/tar.gz/refs/heads/master","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Tumo505%2FHeartMap/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":273751024,"owners_count":25161455,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-09-05T02:00:09.113Z","response_time":402,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"owner":{"login":"Tumo505","name":"Tumo_505","uuid":"43002871","kind":"user","description":"Software Engineer","email":"","website":null,"location":"gaborone, botswana","twitter":"tumokgabeng","company":"@Anton-Tech-BW, @GDSC-BotswanaAccountancyCollege","icon_url":"https://avatars.githubusercontent.com/u/43002871?u=9778e3d960240b01b4ec239e802748ff2b3123b2\u0026v=4","repositories_count":78,"last_synced_at":"2024-04-18T05:59:02.495Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/Tumo505","funding_links":[],"total_stars":4,"followers":44,"following":49,"created_at":"2022-11-14T23:06:32.359Z","updated_at":"2024-04-18T05:59:26.332Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/Tumo505","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/Tumo505/repositories"},"packages":[{"id":11984123,"name":"heartmap","ecosystem":"pypi","description":"Heart Multi-chamber Analysis Platform for single-cell RNA-seq","homepage":"https://github.com/Tumo505/HeartMap","licenses":"Apache Software License","normalized_licenses":["Apache-2.0"],"repository_url":"https://github.com/Tumo505/HeartMap","keywords_array":["single-cell","RNA-seq","heart","cell-communication","bioinformatics","spatial-transcriptomics"],"namespace":null,"versions_count":1,"first_release_published_at":"2025-08-06T18:42:47.000Z","latest_release_published_at":"2025-08-06T18:42:47.000Z","latest_release_number":"1.0.0","last_synced_at":"2025-08-06T18:45:32.501Z","created_at":"2025-08-06T18:45:31.998Z","updated_at":"2025-08-06T18:45:37.651Z","registry_url":"https://pypi.org/project/heartmap/","install_command":"pip install heartmap --index-url https://pypi.org/simple","documentation_url":"https://github.com/Tumo505/HeartMap/wiki","metadata":{"funding":null,"documentation":"https://github.com/Tumo505/HeartMap/wiki","classifiers":["Development Status :: 4 - Beta","Intended Audience :: Science/Research","License :: OSI Approved :: Apache Software License","Operating System :: OS Independent","Programming Language :: Python :: 3","Programming Language :: Python :: 3.10","Programming Language :: Python :: 3.11","Programming Language :: Python :: 3.8","Programming Language :: Python :: 3.9","Topic :: Scientific/Engineering :: Bio-Informatics"],"normalized_name":"heartmap"},"repo_metadata":{"id":305239138,"uuid":"1022337160","full_name":"Tumo505/HeartMap","owner":"Tumo505","description":null,"archived":false,"fork":false,"pushed_at":"2025-08-05T21:31:32.000Z","size":1960,"stargazers_count":1,"open_issues_count":0,"forks_count":0,"subscribers_count":0,"default_branch":"master","last_synced_at":"2025-08-05T23:24:27.676Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":null,"language":"HTML","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"apache-2.0","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/Tumo505.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":"CITATION.cff","codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null}},"created_at":"2025-07-18T21:48:46.000Z","updated_at":"2025-08-05T21:31:36.000Z","dependencies_parsed_at":"2025-07-19T11:13:55.469Z","dependency_job_id":"fdda8a7f-4dc1-47c0-9539-ef9d87f2ef29","html_url":"https://github.com/Tumo505/HeartMap","commit_stats":null,"previous_names":["tumo505/grail-heart-cell-cell-communication","tumo505/heartmap"],"tags_count":1,"template":false,"template_full_name":null,"purl":"pkg:github/Tumo505/HeartMap","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Tumo505%2FHeartMap","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Tumo505%2FHeartMap/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Tumo505%2FHeartMap/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Tumo505%2FHeartMap/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/Tumo505","download_url":"https://codeload.github.com/Tumo505/HeartMap/tar.gz/refs/heads/master","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Tumo505%2FHeartMap/sbom","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":269136203,"owners_count":24366537,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-08-06T02:00:09.910Z","response_time":99,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"repo_metadata_updated_at":"2025-08-06T18:45:37.650Z","dependent_packages_count":0,"downloads":null,"downloads_period":"last-month","dependent_repos_count":0,"rankings":{"downloads":null,"dependent_repos_count":49.16798205009335,"dependent_packages_count":8.7252288907221,"stargazers_count":null,"forks_count":null,"docker_downloads_count":null,"average":28.946605470407725},"purl":"pkg:pypi/heartmap","advisories":[],"docker_usage_url":"https://docker.ecosyste.ms/usage/pypi/heartmap","docker_dependents_count":null,"docker_downloads_count":null,"usage_url":"https://repos.ecosyste.ms/usage/pypi/heartmap","dependent_repositories_url":"https://repos.ecosyste.ms/api/v1/usage/pypi/heartmap/dependencies","status":null,"funding_links":[],"critical":null,"issue_metadata":null,"versions_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/packages/heartmap/versions","version_numbers_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/packages/heartmap/version_numbers","dependent_packages_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/packages/heartmap/dependent_packages","related_packages_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/packages/heartmap/related_packages","maintainers":[{"uuid":"tumokgabeng","login":"tumokgabeng","name":null,"email":null,"url":null,"packages_count":0,"html_url":"https://pypi.org/user/tumokgabeng/","role":null,"created_at":"2025-08-06T19:33:04.219Z","updated_at":"2025-08-06T19:33:04.219Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/maintainers/tumokgabeng/packages"}],"registry":{"name":"pypi.org","url":"https://pypi.org","ecosystem":"pypi","default":true,"packages_count":725104,"maintainers_count":308363,"namespaces_count":0,"keywords_count":238006,"github":"pypi","metadata":{"funded_packages_count":50519},"icon_url":"https://github.com/pypi.png","created_at":"2022-04-04T15:19:23.364Z","updated_at":"2025-09-05T05:40:58.860Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/packages","maintainers_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/maintainers","namespaces_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/namespaces"}}],"commits":{"message":"Repository syncing started."},"issues_stats":{"full_name":"Tumo505/HeartMap","html_url":"https://github.com/Tumo505/HeartMap","last_synced_at":null,"status":null,"issues_count":null,"pull_requests_count":null,"avg_time_to_close_issue":null,"avg_time_to_close_pull_request":null,"issues_closed_count":null,"pull_requests_closed_count":null,"pull_request_authors_count":null,"issue_authors_count":null,"avg_comments_per_issue":null,"avg_comments_per_pull_request":null,"merged_pull_requests_count":null,"bot_issues_count":null,"bot_pull_requests_count":null,"past_year_issues_count":null,"past_year_pull_requests_count":null,"past_year_avg_time_to_close_issue":null,"past_year_avg_time_to_close_pull_request":null,"past_year_issues_closed_count":null,"past_year_pull_requests_closed_count":null,"past_year_pull_request_authors_count":null,"past_year_issue_authors_count":null,"past_year_avg_comments_per_issue":null,"past_year_avg_comments_per_pull_request":null,"past_year_bot_issues_count":null,"past_year_bot_pull_requests_count":null,"past_year_merged_pull_requests_count":null,"created_at":"2025-08-29T12:39:37.936Z","updated_at":"2025-08-29T23:02:23.932Z","repository_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/Tumo505%2FHeartMap","issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/Tumo505%2FHeartMap/issues","issue_labels_count":{},"pull_request_labels_count":{},"issue_author_associations_count":{},"pull_request_author_associations_count":{"OWNER":9},"issue_authors":{},"pull_request_authors":{"Tumo505":9},"host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-05T00:00:10.444Z","repositories_count":10098650,"issues_count":31447165,"pull_requests_count":97330651,"authors_count":10702032,"icon_url":"https://github.com/github.png","host_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories","owners_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/owners","authors_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors"},"past_year_issue_labels_count":{},"past_year_pull_request_labels_count":{},"past_year_issue_author_associations_count":{},"past_year_pull_request_author_associations_count":{"OWNER":9},"past_year_issue_authors":{},"past_year_pull_request_authors":{"Tumo505":9},"maintainers":[{"login":"Tumo505","count":9,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/Tumo505"}],"active_maintainers":[{"login":"Tumo505","count":9,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/Tumo505"}]},"events":{"total":{"ReleaseEvent":1,"WatchEvent":1,"IssueCommentEvent":1,"PushEvent":17,"PullRequestEvent":17,"PullRequestReviewCommentEvent":5,"PullRequestReviewEvent":2,"CreateEvent":3},"last_year":{"ReleaseEvent":1,"WatchEvent":1,"IssueCommentEvent":1,"PushEvent":17,"PullRequestEvent":17,"PullRequestReviewCommentEvent":5,"PullRequestReviewEvent":2,"CreateEvent":3}},"keywords":[],"dependencies":[{"ecosystem":"pypi","filepath":"requirements.txt","sha":null,"kind":"manifest","created_at":"2025-07-19T03:26:28.219Z","updated_at":"2025-07-19T03:26:28.219Z","repository_link":"https://github.com/Tumo505/HeartMap/blob/master/requirements.txt","dependencies":[{"id":24208800571,"package_name":"scanpy","ecosystem":"pypi","requirements":"\u003e=1.9.0","direct":true,"kind":"runtime","optional":false},{"id":24208802072,"package_name":"pandas","ecosystem":"pypi","requirements":"\u003e=1.5.0","direct":true,"kind":"runtime","optional":false},{"id":24208802073,"package_name":"numpy","ecosystem":"pypi","requirements":"\u003e=1.21.0","direct":true,"kind":"runtime","optional":false},{"id":24208802074,"package_name":"matplotlib","ecosystem":"pypi","requirements":"\u003e=3.5.0","direct":true,"kind":"runtime","optional":false},{"id":24208802075,"package_name":"seaborn","ecosystem":"pypi","requirements":"\u003e=0.11.0","direct":true,"kind":"runtime","optional":false},{"id":24208802076,"package_name":"anndata","ecosystem":"pypi","requirements":"\u003e=0.8.0","direct":true,"kind":"runtime","optional":false},{"id":24208802077,"package_name":"cellphonedb","ecosystem":"pypi","requirements":"\u003e=3.0.0","direct":true,"kind":"runtime","optional":false},{"id":24208804436,"package_name":"liana","ecosystem":"pypi","requirements":"\u003e=0.1.0","direct":true,"kind":"runtime","optional":false},{"id":24208804625,"package_name":"omnipath","ecosystem":"pypi","requirements":"\u003e=1.0.0","direct":true,"kind":"runtime","optional":false},{"id":24208804985,"package_name":"plotly","ecosystem":"pypi","requirements":"\u003e=5.0.0","direct":true,"kind":"runtime","optional":false},{"id":24208804986,"package_name":"networkx","ecosystem":"pypi","requirements":"\u003e=2.8.0","direct":true,"kind":"runtime","optional":false},{"id":24208804987,"package_name":"scipy","ecosystem":"pypi","requirements":"\u003e=1.9.0","direct":true,"kind":"runtime","optional":false},{"id":24208804988,"package_name":"scikit-learn","ecosystem":"pypi","requirements":"\u003e=1.1.0","direct":true,"kind":"runtime","optional":false}]},{"ecosystem":"conda","filepath":"environment.yml","sha":null,"kind":"manifest","created_at":"2025-07-19T11:13:53.297Z","updated_at":"2025-07-19T11:13:53.297Z","repository_link":"https://github.com/Tumo505/HeartMap/blob/master/environment.yml","dependencies":[{"id":24213000265,"package_name":"anndata","ecosystem":"conda","requirements":"\u003e=0.8.0","direct":true,"kind":"runtime","optional":false},{"id":24213000340,"package_name":"ipython","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":24213000341,"package_name":"ipywidgets","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":24213000342,"package_name":"jupyterlab","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":24213000343,"package_name":"matplotlib","ecosystem":"conda","requirements":"\u003e=3.5.0","direct":true,"kind":"runtime","optional":false},{"id":24213000344,"package_name":"networkx","ecosystem":"conda","requirements":"\u003e=2.8.0","direct":true,"kind":"runtime","optional":false},{"id":24213000345,"package_name":"notebook","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":24213000346,"package_name":"numpy","ecosystem":"conda","requirements":"\u003e=1.21.0","direct":true,"kind":"runtime","optional":false},{"id":24213000347,"package_name":"pandas","ecosystem":"conda","requirements":"\u003e=1.5.0","direct":true,"kind":"runtime","optional":false},{"id":24213000348,"package_name":"pip","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":24213000349,"package_name":"plotly","ecosystem":"conda","requirements":"\u003e=5.0.0","direct":true,"kind":"runtime","optional":false},{"id":24213000350,"package_name":"python","ecosystem":"conda","requirements":"3.10.*","direct":true,"kind":"runtime","optional":false},{"id":24213000351,"package_name":"scanpy","ecosystem":"conda","requirements":"\u003e=1.9.0","direct":true,"kind":"runtime","optional":false},{"id":24213000411,"package_name":"scikit-learn","ecosystem":"conda","requirements":"\u003e=1.1.0","direct":true,"kind":"runtime","optional":false},{"id":24213000412,"package_name":"scipy","ecosystem":"conda","requirements":"\u003e=1.9.0","direct":true,"kind":"runtime","optional":false},{"id":24213000413,"package_name":"seaborn","ecosystem":"conda","requirements":"\u003e=0.11.0","direct":true,"kind":"runtime","optional":false},{"id":24213000414,"package_name":"statsmodels","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false},{"id":24213000415,"package_name":"tqdm","ecosystem":"conda","requirements":"","direct":true,"kind":"runtime","optional":false}]}],"score":null,"created_at":"2025-09-04T15:51:24.370Z","updated_at":"2025-10-07T08:19:14.132Z","avatar_url":"https://github.com/Tumo505.png","language":"HTML","category":null,"sub_category":null,"monthly_downloads":0,"funding_links":[],"readme_doi_urls":["https://doi.org/10.5281/zenodo.16745118"],"works":{},"citation_counts":{},"total_citations":0,"keywords_from_contributors":[],"project_url":"https://science.ecosyste.ms/api/v1/projects/48793","html_url":"https://science.ecosyste.ms/projects/48793","bibtex_url":"https://science.ecosyste.ms/projects/48793/export.bibtex","apalike_url":"https://science.ecosyste.ms/projects/48793/export.apalike"}