{"id":53145,"name":"calisim","description":"A toolbox for the calibration and evaluation of simulation models.","url":"https://github.com/plant-food-research-open/calisim","last_synced_at":"2025-09-08T12:05:55.407Z","repository":{"id":282814361,"uuid":"875090113","full_name":"Plant-Food-Research-Open/calisim","owner":"Plant-Food-Research-Open","description":"A toolbox for the calibration and evaluation of simulation models.","archived":false,"fork":false,"pushed_at":"2025-08-10T11:48:31.000Z","size":7457,"stargazers_count":15,"open_issues_count":14,"forks_count":2,"subscribers_count":9,"default_branch":"main","last_synced_at":"2025-08-10T13:16:38.664Z","etag":null,"topics":["abc","active-learning","approximate-bayesian-computation","bayesian-calibration","bayesian-optimization","bayesian-quadrature","evolutionary-algorithms","experimental-design","history-matching","model-calibration","optimal-experimental-design","optimisation","reliability-analysis","sbi","sensitivity-analysis","simulation-based-inference","surrogate-based-optimization","surrogate-models","uncertainty-analysis","uncertainty-quantification"],"latest_commit_sha":null,"homepage":"https://calisim.readthedocs.io","language":"Python","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"apache-2.0","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/Plant-Food-Research-Open.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":"CONTRIBUTING.md","funding":null,"license":"LICENSE","code_of_conduct":"CODE_OF_CONDUCT.md","threat_model":null,"audit":null,"citation":"CITATION.cff","codeowners":null,"security":"SECURITY.md","support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null}},"created_at":"2024-10-19T04:36:28.000Z","updated_at":"2025-08-10T11:33:25.000Z","dependencies_parsed_at":"2025-08-10T13:09:31.055Z","dependency_job_id":"e41e7fb6-1b0d-4d26-a68a-d559914e7b2f","html_url":"https://github.com/Plant-Food-Research-Open/calisim","commit_stats":null,"previous_names":["plantandfoodresearch/calisim"],"tags_count":15,"template":false,"template_full_name":null,"purl":"pkg:github/Plant-Food-Research-Open/calisim","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Plant-Food-Research-Open%2Fcalisim","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Plant-Food-Research-Open%2Fcalisim/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Plant-Food-Research-Open%2Fcalisim/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Plant-Food-Research-Open%2Fcalisim/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/Plant-Food-Research-Open","download_url":"https://codeload.github.com/Plant-Food-Research-Open/calisim/tar.gz/refs/heads/main","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Plant-Food-Research-Open%2Fcalisim/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":274181739,"owners_count":25236552,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-09-08T02:00:09.813Z","response_time":121,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"owner":{"login":"Plant-Food-Research-Open","name":"Plant-Food-Research-Open","uuid":"142852771","kind":"organization","description":null,"email":null,"website":null,"location":null,"twitter":null,"company":null,"icon_url":"https://avatars.githubusercontent.com/u/142852771?v=4","repositories_count":1,"last_synced_at":"2023-08-24T04:45:21.767Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/Plant-Food-Research-Open","funding_links":[],"total_stars":null,"followers":null,"following":null,"created_at":"2023-08-24T04:45:21.836Z","updated_at":"2023-08-24T04:45:21.836Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/Plant-Food-Research-Open","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/Plant-Food-Research-Open/repositories"},"packages":[{"id":11439379,"name":"calisim","ecosystem":"pypi","description":"A toolbox for the calibration and evaluation of simulation models.","homepage":"https://github.com/Plant-Food-Research-Open/calisim","licenses":"Apache-2.0","normalized_licenses":["Apache-2.0"],"repository_url":"https://github.com/Plant-Food-Research-Open/calisim","keywords_array":[],"namespace":null,"versions_count":11,"first_release_published_at":"2025-03-17T04:50:34.000Z","latest_release_published_at":"2025-08-10T11:38:07.000Z","latest_release_number":"0.6.1","last_synced_at":"2025-08-10T11:45:28.097Z","created_at":"2025-03-17T05:15:23.302Z","updated_at":"2025-08-10T14:25:19.534Z","registry_url":"https://pypi.org/project/calisim/","install_command":"pip install calisim --index-url https://pypi.org/simple","documentation_url":"https://calisim.readthedocs.io/","metadata":{"funding":null,"documentation":null,"classifiers":["License :: OSI Approved :: Apache Software License","Programming Language :: Python :: 3","Programming Language :: Python :: 3.10","Programming Language :: Python :: 3.11","Programming Language :: Python :: 3.12"],"normalized_name":"calisim"},"repo_metadata":{"id":282814361,"uuid":"875090113","full_name":"Plant-Food-Research-Open/calisim","owner":"Plant-Food-Research-Open","description":"A toolbox for the calibration and evaluation of simulation models.","archived":false,"fork":false,"pushed_at":"2025-08-10T11:48:31.000Z","size":7457,"stargazers_count":15,"open_issues_count":14,"forks_count":2,"subscribers_count":9,"default_branch":"main","last_synced_at":"2025-08-10T13:16:38.664Z","etag":null,"topics":["abc","active-learning","approximate-bayesian-computation","bayesian-calibration","bayesian-optimization","bayesian-quadrature","evolutionary-algorithms","experimental-design","history-matching","model-calibration","optimal-experimental-design","optimisation","reliability-analysis","sbi","sensitivity-analysis","simulation-based-inference","surrogate-based-optimization","surrogate-models","uncertainty-analysis","uncertainty-quantification"],"latest_commit_sha":null,"homepage":"https://calisim.readthedocs.io","language":"Python","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"apache-2.0","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/Plant-Food-Research-Open.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":"CONTRIBUTING.md","funding":null,"license":"LICENSE","code_of_conduct":"CODE_OF_CONDUCT.md","threat_model":null,"audit":null,"citation":"CITATION.cff","codeowners":null,"security":"SECURITY.md","support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null}},"created_at":"2024-10-19T04:36:28.000Z","updated_at":"2025-08-10T11:33:25.000Z","dependencies_parsed_at":"2025-08-10T13:09:31.055Z","dependency_job_id":"e41e7fb6-1b0d-4d26-a68a-d559914e7b2f","html_url":"https://github.com/Plant-Food-Research-Open/calisim","commit_stats":null,"previous_names":["plantandfoodresearch/calisim"],"tags_count":15,"template":false,"template_full_name":null,"purl":"pkg:github/Plant-Food-Research-Open/calisim","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Plant-Food-Research-Open%2Fcalisim","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Plant-Food-Research-Open%2Fcalisim/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Plant-Food-Research-Open%2Fcalisim/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Plant-Food-Research-Open%2Fcalisim/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/Plant-Food-Research-Open","download_url":"https://codeload.github.com/Plant-Food-Research-Open/calisim/tar.gz/refs/heads/main","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Plant-Food-Research-Open%2Fcalisim/sbom","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":269735244,"owners_count":24466827,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-08-10T02:00:08.965Z","response_time":71,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"},"owner_record":{"login":"Plant-Food-Research-Open","name":"Plant-Food-Research-Open","uuid":"142852771","kind":"organization","description":null,"email":null,"website":null,"location":null,"twitter":null,"company":null,"icon_url":"https://avatars.githubusercontent.com/u/142852771?v=4","repositories_count":1,"last_synced_at":"2023-08-24T04:45:21.767Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/Plant-Food-Research-Open","funding_links":[],"total_stars":null,"followers":null,"following":null,"created_at":"2023-08-24T04:45:21.836Z","updated_at":"2023-08-24T04:45:21.836Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/Plant-Food-Research-Open","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/Plant-Food-Research-Open/repositories"},"tags":[{"name":"v0.6.1","sha":"428152aa2c1b8e62c58eabd4e6f781990be84709","kind":"commit","published_at":"2025-08-10T11:33:08.000Z","download_url":"https://codeload.github.com/Plant-Food-Research-Open/calisim/tar.gz/v0.6.1","html_url":"https://github.com/Plant-Food-Research-Open/calisim/releases/tag/v0.6.1","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/Plant-Food-Research-Open/calisim@v0.6.1","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Plant-Food-Research-Open%2Fcalisim/tags/v0.6.1","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Plant-Food-Research-Open%2Fcalisim/tags/v0.6.1/manifests"},{"name":"pfr-internal-v0.4.0","sha":"a2ae5d57f53f9b142b89d96bfbcb7ca39a7df52e","kind":"commit","published_at":"2025-06-19T21:27:00.000Z","download_url":"https://codeload.github.com/Plant-Food-Research-Open/calisim/tar.gz/pfr-internal-v0.4.0","html_url":"https://github.com/Plant-Food-Research-Open/calisim/releases/tag/pfr-internal-v0.4.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/Plant-Food-Research-Open/calisim@pfr-internal-v0.4.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Plant-Food-Research-Open%2Fcalisim/tags/pfr-internal-v0.4.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Plant-Food-Research-Open%2Fcalisim/tags/pfr-internal-v0.4.0/manifests"},{"name":"pfr-internal-v0.3.0","sha":"740458fd01c0b92ce7eb33ae312ebbabb9d99cdb","kind":"commit","published_at":"2025-05-22T03:10:41.000Z","download_url":"https://codeload.github.com/Plant-Food-Research-Open/calisim/tar.gz/pfr-internal-v0.3.0","html_url":"https://github.com/Plant-Food-Research-Open/calisim/releases/tag/pfr-internal-v0.3.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/Plant-Food-Research-Open/calisim@pfr-internal-v0.3.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Plant-Food-Research-Open%2Fcalisim/tags/pfr-internal-v0.3.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Plant-Food-Research-Open%2Fcalisim/tags/pfr-internal-v0.3.0/manifests"},{"name":"pfr-internal-v0.2.0","sha":"96c29595f8d7ffc97143934d736736303f56f877","kind":"commit","published_at":"2025-04-30T04:29:49.000Z","download_url":"https://codeload.github.com/Plant-Food-Research-Open/calisim/tar.gz/pfr-internal-v0.2.0","html_url":"https://github.com/Plant-Food-Research-Open/calisim/releases/tag/pfr-internal-v0.2.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/Plant-Food-Research-Open/calisim@pfr-internal-v0.2.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Plant-Food-Research-Open%2Fcalisim/tags/pfr-internal-v0.2.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Plant-Food-Research-Open%2Fcalisim/tags/pfr-internal-v0.2.0/manifests"},{"name":"v0.6.0","sha":"c1522ad47c20af5e014e3b6338001add8045fb75","kind":"commit","published_at":"2025-04-27T10:38:13.000Z","download_url":"https://codeload.github.com/Plant-Food-Research-Open/calisim/tar.gz/v0.6.0","html_url":"https://github.com/Plant-Food-Research-Open/calisim/releases/tag/v0.6.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/Plant-Food-Research-Open/calisim@v0.6.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Plant-Food-Research-Open%2Fcalisim/tags/v0.6.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Plant-Food-Research-Open%2Fcalisim/tags/v0.6.0/manifests"},{"name":"v0.5.0","sha":"e2cf5702e9f322e0831b484ffb11d48b7aadf3b0","kind":"commit","published_at":"2025-04-25T06:55:47.000Z","download_url":"https://codeload.github.com/Plant-Food-Research-Open/calisim/tar.gz/v0.5.0","html_url":"https://github.com/Plant-Food-Research-Open/calisim/releases/tag/v0.5.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/Plant-Food-Research-Open/calisim@v0.5.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Plant-Food-Research-Open%2Fcalisim/tags/v0.5.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Plant-Food-Research-Open%2Fcalisim/tags/v0.5.0/manifests"},{"name":"v0.3.1","sha":"7a98e8b3184868b1e088c20d6350acbf847d6bb8","kind":"commit","published_at":"2025-03-30T08:47:47.000Z","download_url":"https://codeload.github.com/Plant-Food-Research-Open/calisim/tar.gz/v0.3.1","html_url":"https://github.com/Plant-Food-Research-Open/calisim/releases/tag/v0.3.1","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/Plant-Food-Research-Open/calisim@v0.3.1","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Plant-Food-Research-Open%2Fcalisim/tags/v0.3.1","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Plant-Food-Research-Open%2Fcalisim/tags/v0.3.1/manifests"},{"name":"pfr-internal-v0.1.0","sha":"cfe00853ad89d9ff9a51b9174bd3d1194c2040bc","kind":"commit","published_at":"2025-03-28T11:22:16.000Z","download_url":"https://codeload.github.com/Plant-Food-Research-Open/calisim/tar.gz/pfr-internal-v0.1.0","html_url":"https://github.com/Plant-Food-Research-Open/calisim/releases/tag/pfr-internal-v0.1.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/Plant-Food-Research-Open/calisim@pfr-internal-v0.1.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Plant-Food-Research-Open%2Fcalisim/tags/pfr-internal-v0.1.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Plant-Food-Research-Open%2Fcalisim/tags/pfr-internal-v0.1.0/manifests"},{"name":"v0.3.0","sha":"0baad424929031c107f46550707f91ac83cfb64d","kind":"commit","published_at":"2025-03-24T06:09:15.000Z","download_url":"https://codeload.github.com/Plant-Food-Research-Open/calisim/tar.gz/v0.3.0","html_url":"https://github.com/Plant-Food-Research-Open/calisim/releases/tag/v0.3.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/Plant-Food-Research-Open/calisim@v0.3.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Plant-Food-Research-Open%2Fcalisim/tags/v0.3.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Plant-Food-Research-Open%2Fcalisim/tags/v0.3.0/manifests"},{"name":"v0.2.3","sha":"69cab6cdab1fa9c68e332c5a80a70d2bc2e027cb","kind":"commit","published_at":"2025-03-24T05:46:31.000Z","download_url":"https://codeload.github.com/Plant-Food-Research-Open/calisim/tar.gz/v0.2.3","html_url":"https://github.com/Plant-Food-Research-Open/calisim/releases/tag/v0.2.3","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/Plant-Food-Research-Open/calisim@v0.2.3","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Plant-Food-Research-Open%2Fcalisim/tags/v0.2.3","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Plant-Food-Research-Open%2Fcalisim/tags/v0.2.3/manifests"},{"name":"v0.2.2","sha":"d92fea8fd6363359ff4487c38bf6987a53c6839d","kind":"commit","published_at":"2025-03-24T04:44:43.000Z","download_url":"https://codeload.github.com/Plant-Food-Research-Open/calisim/tar.gz/v0.2.2","html_url":"https://github.com/Plant-Food-Research-Open/calisim/releases/tag/v0.2.2","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/Plant-Food-Research-Open/calisim@v0.2.2","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Plant-Food-Research-Open%2Fcalisim/tags/v0.2.2","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Plant-Food-Research-Open%2Fcalisim/tags/v0.2.2/manifests"},{"name":"v0.2.1","sha":"38342890207bad796a1e34d248207a94fda5d818","kind":"commit","published_at":"2025-03-21T04:42:43.000Z","download_url":"https://codeload.github.com/Plant-Food-Research-Open/calisim/tar.gz/v0.2.1","html_url":"https://github.com/Plant-Food-Research-Open/calisim/releases/tag/v0.2.1","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/Plant-Food-Research-Open/calisim@v0.2.1","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Plant-Food-Research-Open%2Fcalisim/tags/v0.2.1","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Plant-Food-Research-Open%2Fcalisim/tags/v0.2.1/manifests"},{"name":"v0.2.0","sha":"2bc6a9c6fc24f3c2b790fc5c06e1c9d74cfc2261","kind":"commit","published_at":"2025-03-19T11:59:11.000Z","download_url":"https://codeload.github.com/Plant-Food-Research-Open/calisim/tar.gz/v0.2.0","html_url":"https://github.com/Plant-Food-Research-Open/calisim/releases/tag/v0.2.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/Plant-Food-Research-Open/calisim@v0.2.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Plant-Food-Research-Open%2Fcalisim/tags/v0.2.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Plant-Food-Research-Open%2Fcalisim/tags/v0.2.0/manifests"},{"name":"v0.1.0","sha":"d5893613acf79fc482e2abc12197d34e1e065271","kind":"commit","published_at":"2025-03-17T07:45:54.000Z","download_url":"https://codeload.github.com/Plant-Food-Research-Open/calisim/tar.gz/v0.1.0","html_url":"https://github.com/Plant-Food-Research-Open/calisim/releases/tag/v0.1.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/Plant-Food-Research-Open/calisim@v0.1.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Plant-Food-Research-Open%2Fcalisim/tags/v0.1.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Plant-Food-Research-Open%2Fcalisim/tags/v0.1.0/manifests"},{"name":"v0.4.0","sha":"8dc296be17291ccadb4cf209713d6f373c2a6ad9","kind":"commit","published_at":"2025-03-10T00:42:31.000Z","download_url":"https://codeload.github.com/Plant-Food-Research-Open/calisim/tar.gz/v0.4.0","html_url":"https://github.com/Plant-Food-Research-Open/calisim/releases/tag/v0.4.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/Plant-Food-Research-Open/calisim@v0.4.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Plant-Food-Research-Open%2Fcalisim/tags/v0.4.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Plant-Food-Research-Open%2Fcalisim/tags/v0.4.0/manifests"}]},"repo_metadata_updated_at":"2025-08-10T14:25:19.533Z","dependent_packages_count":0,"downloads":78,"downloads_period":"last-month","dependent_repos_count":0,"rankings":{"downloads":null,"dependent_repos_count":53.32322980762806,"dependent_packages_count":9.46856264692126,"stargazers_count":null,"forks_count":null,"docker_downloads_count":null,"average":31.395896227274662},"purl":"pkg:pypi/calisim","advisories":[],"docker_usage_url":"https://docker.ecosyste.ms/usage/pypi/calisim","docker_dependents_count":null,"docker_downloads_count":null,"usage_url":"https://repos.ecosyste.ms/usage/pypi/calisim","dependent_repositories_url":"https://repos.ecosyste.ms/api/v1/usage/pypi/calisim/dependencies","status":null,"funding_links":[],"critical":null,"issue_metadata":null,"versions_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/packages/calisim/versions","version_numbers_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/packages/calisim/version_numbers","dependent_packages_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/packages/calisim/dependent_packages","related_packages_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/packages/calisim/related_packages","maintainers":[{"uuid":"jabristow","login":"jabristow","name":null,"email":null,"url":null,"packages_count":1,"html_url":"https://pypi.org/user/jabristow/","role":"Owner","created_at":"2025-03-17T05:15:24.745Z","updated_at":"2025-03-17T05:15:24.745Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/maintainers/jabristow/packages"}],"registry":{"name":"pypi.org","url":"https://pypi.org","ecosystem":"pypi","default":true,"packages_count":726125,"maintainers_count":308800,"namespaces_count":0,"keywords_count":238245,"github":"pypi","metadata":{"funded_packages_count":50579},"icon_url":"https://github.com/pypi.png","created_at":"2022-04-04T15:19:23.364Z","updated_at":"2025-09-08T05:32:36.857Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/packages","maintainers_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/maintainers","namespaces_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/namespaces"}}],"commits":{"message":"Repository syncing started."},"issues_stats":{"full_name":"Plant-Food-Research-Open/calisim","html_url":"https://github.com/Plant-Food-Research-Open/calisim","last_synced_at":"2025-09-01T10:07:46.796Z","status":null,"issues_count":13,"pull_requests_count":19,"avg_time_to_close_issue":4055468.285714286,"avg_time_to_close_pull_request":4187249.3,"issues_closed_count":7,"pull_requests_closed_count":10,"pull_request_authors_count":2,"issue_authors_count":3,"avg_comments_per_issue":0.38461538461538464,"avg_comments_per_pull_request":0.3157894736842105,"merged_pull_requests_count":0,"bot_issues_count":0,"bot_pull_requests_count":18,"past_year_issues_count":13,"past_year_pull_requests_count":19,"past_year_avg_time_to_close_issue":4055468.285714286,"past_year_avg_time_to_close_pull_request":4187249.3,"past_year_issues_closed_count":7,"past_year_pull_requests_closed_count":10,"past_year_pull_request_authors_count":2,"past_year_issue_authors_count":3,"past_year_avg_comments_per_issue":0.38461538461538464,"past_year_avg_comments_per_pull_request":0.3157894736842105,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":18,"past_year_merged_pull_requests_count":0,"created_at":"2025-08-29T17:10:38.596Z","updated_at":"2025-09-01T10:07:46.798Z","repository_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/Plant-Food-Research-Open%2Fcalisim","issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/Plant-Food-Research-Open%2Fcalisim/issues","issue_labels_count":{"enhancement":4,"bug":2,"python":2,"help wanted":1,"documentation":1},"pull_request_labels_count":{"dependencies":17,"python":15},"issue_author_associations_count":{"MEMBER":7,"COLLABORATOR":5,"NONE":1},"pull_request_author_associations_count":{"NONE":17,"MEMBER":1},"issue_authors":{"JBris":9,"hanaliangpnf":3,"HeatherKJenkins":1},"pull_request_authors":{"dependabot[bot]":17,"JBris":1},"host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-08T00:00:17.013Z","repositories_count":10165784,"issues_count":31999265,"pull_requests_count":100269215,"authors_count":10729006,"icon_url":"https://github.com/github.png","host_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories","owners_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/owners","authors_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors"},"past_year_issue_labels_count":{"enhancement":4,"bug":2,"python":2,"help wanted":1,"documentation":1},"past_year_pull_request_labels_count":{"dependencies":17,"python":15},"past_year_issue_author_associations_count":{"MEMBER":7,"COLLABORATOR":5,"NONE":1},"past_year_pull_request_author_associations_count":{"NONE":17,"MEMBER":1},"past_year_issue_authors":{"JBris":9,"hanaliangpnf":3,"HeatherKJenkins":1},"past_year_pull_request_authors":{"dependabot[bot]":17,"JBris":1},"maintainers":[{"login":"JBris","count":10,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/JBris"},{"login":"hanaliangpnf","count":3,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/hanaliangpnf"}],"active_maintainers":[{"login":"JBris","count":10,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/JBris"},{"login":"hanaliangpnf","count":3,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/hanaliangpnf"}]},"events":{"total":{"CreateEvent":35,"ReleaseEvent":17,"IssuesEvent":21,"WatchEvent":13,"DeleteEvent":21,"MemberEvent":1,"IssueCommentEvent":24,"PushEvent":215,"PublicEvent":1,"GollumEvent":1,"PullRequestEvent":29,"ForkEvent":2},"last_year":{"CreateEvent":35,"ReleaseEvent":17,"IssuesEvent":21,"WatchEvent":13,"DeleteEvent":21,"MemberEvent":1,"IssueCommentEvent":24,"PushEvent":215,"PublicEvent":1,"GollumEvent":1,"PullRequestEvent":29,"ForkEvent":2}},"keywords":["abc","active-learning","approximate-bayesian-computation","bayesian-calibration","bayesian-optimization","bayesian-quadrature","evolutionary-algorithms","experimental-design","history-matching","model-calibration","optimal-experimental-design","optimisation","reliability-analysis","sbi","sensitivity-analysis","simulation-based-inference","surrogate-based-optimization","surrogate-models","uncertainty-analysis","uncertainty-quantification"],"dependencies":[{"ecosystem":"actions","filepath":".github/workflows/build.yaml","sha":null,"kind":"manifest","created_at":"2025-04-08T16:42:03.956Z","updated_at":"2025-04-08T16:42:03.956Z","repository_link":"https://github.com/Plant-Food-Research-Open/calisim/blob/main/.github/workflows/build.yaml","dependencies":[{"id":22599808012,"package_name":"actions/checkout","ecosystem":"actions","requirements":"v3","direct":true,"kind":"composite","optional":false},{"id":22599808013,"package_name":"docker/setup-qemu-action","ecosystem":"actions","requirements":"v3","direct":true,"kind":"composite","optional":false},{"id":22599808014,"package_name":"docker/setup-buildx-action","ecosystem":"actions","requirements":"v3","direct":true,"kind":"composite","optional":false},{"id":22599808015,"package_name":"docker/login-action","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false}]},{"ecosystem":"actions","filepath":".github/workflows/codeql.yaml","sha":null,"kind":"manifest","created_at":"2025-04-08T16:42:04.089Z","updated_at":"2025-04-08T16:42:04.089Z","repository_link":"https://github.com/Plant-Food-Research-Open/calisim/blob/main/.github/workflows/codeql.yaml","dependencies":[{"id":22599810470,"package_name":"actions/checkout","ecosystem":"actions","requirements":"v4","direct":true,"kind":"composite","optional":false},{"id":22599810471,"package_name":"github/codeql-action/init","ecosystem":"actions","requirements":"v3","direct":true,"kind":"composite","optional":false},{"id":22599810472,"package_name":"github/codeql-action/analyze","ecosystem":"actions","requirements":"v3","direct":true,"kind":"composite","optional":false}]},{"ecosystem":"actions","filepath":".github/workflows/lint.yaml","sha":null,"kind":"manifest","created_at":"2025-04-08T16:42:04.818Z","updated_at":"2025-04-08T16:42:04.818Z","repository_link":"https://github.com/Plant-Food-Research-Open/calisim/blob/main/.github/workflows/lint.yaml","dependencies":[{"id":22599810488,"package_name":"actions/checkout","ecosystem":"actions","requirements":"v3","direct":true,"kind":"composite","optional":false},{"id":22599810489,"package_name":"actions/setup-python","ecosystem":"actions","requirements":"v3","direct":true,"kind":"composite","optional":false},{"id":22599810490,"package_name":"snok/install-poetry","ecosystem":"actions","requirements":"v1","direct":true,"kind":"composite","optional":false}]},{"ecosystem":"actions","filepath":".github/workflows/test.yaml","sha":null,"kind":"manifest","created_at":"2025-04-08T16:42:04.890Z","updated_at":"2025-04-08T16:42:04.890Z","repository_link":"https://github.com/Plant-Food-Research-Open/calisim/blob/main/.github/workflows/test.yaml","dependencies":[{"id":22599810506,"package_name":"actions/checkout","ecosystem":"actions","requirements":"v4","direct":true,"kind":"composite","optional":false},{"id":22599810507,"package_name":"actions/setup-python","ecosystem":"actions","requirements":"v5","direct":true,"kind":"composite","optional":false},{"id":22599810508,"package_name":"snok/install-poetry","ecosystem":"actions","requirements":"v1","direct":true,"kind":"composite","optional":false}]},{"ecosystem":"docker","filepath":"Dockerfile","sha":null,"kind":"manifest","created_at":"2025-04-08T16:42:04.950Z","updated_at":"2025-04-08T16:42:04.950Z","repository_link":"https://github.com/Plant-Food-Research-Open/calisim/blob/main/Dockerfile","dependencies":[{"id":22599810514,"package_name":"python","ecosystem":"docker","requirements":"3.10.13-bullseye","direct":true,"kind":"build","optional":false},{"id":22599810515,"package_name":"base","ecosystem":"docker","requirements":"latest","direct":true,"kind":"build","optional":false}]},{"ecosystem":"actions","filepath":".github/workflows/publish.yaml","sha":null,"kind":"manifest","created_at":"2025-03-24T05:25:40.166Z","updated_at":"2025-03-24T05:25:40.166Z","repository_link":"https://github.com/Plant-Food-Research-Open/calisim/blob/main/.github/workflows/publish.yaml","dependencies":[{"id":22393651226,"package_name":"actions/checkout","ecosystem":"actions","requirements":"v3","direct":true,"kind":"composite","optional":false},{"id":22393651227,"package_name":"actions/setup-python","ecosystem":"actions","requirements":"v3","direct":true,"kind":"composite","optional":false},{"id":22393651228,"package_name":"snok/install-poetry","ecosystem":"actions","requirements":"v1","direct":true,"kind":"composite","optional":false}]},{"ecosystem":"pypi","filepath":"poetry.lock","sha":null,"kind":"lockfile","created_at":"2025-03-24T05:25:40.290Z","updated_at":"2025-03-24T05:25:40.290Z","repository_link":"https://github.com/Plant-Food-Research-Open/calisim/blob/main/poetry.lock","dependencies":[{"id":22393651235,"package_name":"absl-py","ecosystem":"pypi","requirements":"2.1.0","direct":false,"kind":"runtime","optional":false},{"id":22393651236,"package_name":"affine","ecosystem":"pypi","requirements":"2.4.0","direct":false,"kind":"runtime","optional":false},{"id":22393651237,"package_name":"alabaster","ecosystem":"pypi","requirements":"1.0.0","direct":false,"kind":"runtime","optional":false},{"id":22393651238,"package_name":"alembic","ecosystem":"pypi","requirements":"1.14.0","direct":false,"kind":"runtime","optional":false},{"id":22393651239,"package_name":"amqp","ecosystem":"pypi","requirements":"5.3.1","direct":false,"kind":"runtime","optional":false},{"id":22393651240,"package_name":"annotated-types","ecosystem":"pypi","requirements":"0.7.0","direct":false,"kind":"runtime","optional":false},{"id":22393651241,"package_name":"antlr4-python3-runtime","ecosystem":"pypi","requirements":"4.9.3","direct":false,"kind":"runtime","optional":false},{"id":22393651242,"package_name":"anyio","ecosystem":"pypi","requirements":"4.6.2.post1","direct":false,"kind":"runtime","optional":false},{"id":22393651243,"package_name":"appnope","ecosystem":"pypi","requirements":"0.1.4","direct":false,"kind":"runtime","optional":false},{"id":22393651244,"package_name":"argon2-cffi","ecosystem":"pypi","requirements":"23.1.0","direct":false,"kind":"runtime","optional":false},{"id":22393651245,"package_name":"argon2-cffi-bindings","ecosystem":"pypi","requirements":"21.2.0","direct":false,"kind":"runtime","optional":false},{"id":22393651246,"package_name":"arrow","ecosystem":"pypi","requirements":"1.3.0","direct":false,"kind":"runtime","optional":false},{"id":22393651247,"package_name":"arviz","ecosystem":"pypi","requirements":"0.20.0","direct":false,"kind":"runtime","optional":false},{"id":22393651248,"package_name":"asttokens","ecosystem":"pypi","requirements":"2.4.1","direct":false,"kind":"runtime","optional":false},{"id":22393651249,"package_name":"async-lru","ecosystem":"pypi","requirements":"2.0.4","direct":false,"kind":"runtime","optional":false},{"id":22393651250,"package_name":"async-timeout","ecosystem":"pypi","requirements":"5.0.1","direct":false,"kind":"runtime","optional":false},{"id":22393651251,"package_name":"attrs","ecosystem":"pypi","requirements":"24.2.0","direct":false,"kind":"runtime","optional":false},{"id":22393651252,"package_name":"autodoc-pydantic","ecosystem":"pypi","requirements":"2.2.0","direct":false,"kind":"runtime","optional":false},{"id":22393651689,"package_name":"ax-platform","ecosystem":"pypi","requirements":"0.4.3","direct":false,"kind":"runtime","optional":false},{"id":22393651690,"package_name":"babel","ecosystem":"pypi","requirements":"2.16.0","direct":false,"kind":"runtime","optional":false},{"id":22393651691,"package_name":"beautifulsoup4","ecosystem":"pypi","requirements":"4.12.3","direct":false,"kind":"runtime","optional":false},{"id":22393651692,"package_name":"billiard","ecosystem":"pypi","requirements":"4.2.1","direct":false,"kind":"runtime","optional":false},{"id":22393651693,"package_name":"bleach","ecosystem":"pypi","requirements":"6.2.0","direct":false,"kind":"runtime","optional":false},{"id":22393651694,"package_name":"botorch","ecosystem":"pypi","requirements":"0.12.0","direct":false,"kind":"runtime","optional":false},{"id":22393651695,"package_name":"branca","ecosystem":"pypi","requirements":"0.8.1","direct":false,"kind":"runtime","optional":false},{"id":22393651696,"package_name":"cachetools","ecosystem":"pypi","requirements":"5.5.0","direct":false,"kind":"runtime","optional":false},{"id":22393651697,"package_name":"celery","ecosystem":"pypi","requirements":"5.4.0","direct":false,"kind":"runtime","optional":false},{"id":22393651698,"package_name":"certifi","ecosystem":"pypi","requirements":"2024.8.30","direct":false,"kind":"runtime","optional":false},{"id":22393651699,"package_name":"cffi","ecosystem":"pypi","requirements":"1.17.1","direct":false,"kind":"runtime","optional":false},{"id":22393651700,"package_name":"cfgv","ecosystem":"pypi","requirements":"3.4.0","direct":false,"kind":"runtime","optional":false},{"id":22393651701,"package_name":"chaospy","ecosystem":"pypi","requirements":"4.3.17","direct":false,"kind":"runtime","optional":false},{"id":22393651702,"package_name":"charset-normalizer","ecosystem":"pypi","requirements":"3.4.0","direct":false,"kind":"runtime","optional":false},{"id":22393651703,"package_name":"click","ecosystem":"pypi","requirements":"8.1.7","direct":false,"kind":"runtime","optional":false},{"id":22393651704,"package_name":"click-didyoumean","ecosystem":"pypi","requirements":"0.3.1","direct":false,"kind":"runtime","optional":false},{"id":22393651705,"package_name":"click-plugins","ecosystem":"pypi","requirements":"1.1.1","direct":false,"kind":"runtime","optional":false},{"id":22393651706,"package_name":"click-repl","ecosystem":"pypi","requirements":"0.3.0","direct":false,"kind":"runtime","optional":false},{"id":22393651707,"package_name":"cligj","ecosystem":"pypi","requirements":"0.7.2","direct":false,"kind":"runtime","optional":false},{"id":22393651708,"package_name":"cloudpickle","ecosystem":"pypi","requirements":"3.1.0","direct":false,"kind":"runtime","optional":false},{"id":22393651709,"package_name":"colorama","ecosystem":"pypi","requirements":"0.4.6","direct":false,"kind":"runtime","optional":false},{"id":22393651710,"package_name":"colorlog","ecosystem":"pypi","requirements":"6.9.0","direct":false,"kind":"runtime","optional":false},{"id":22393651711,"package_name":"comm","ecosystem":"pypi","requirements":"0.2.2","direct":false,"kind":"runtime","optional":false},{"id":22393651712,"package_name":"cons","ecosystem":"pypi","requirements":"0.4.6","direct":false,"kind":"runtime","optional":false},{"id":22393651713,"package_name":"contourpy","ecosystem":"pypi","requirements":"1.3.1","direct":false,"kind":"runtime","optional":false},{"id":22393651714,"package_name":"corner","ecosystem":"pypi","requirements":"2.2.3","direct":false,"kind":"runtime","optional":false},{"id":22393651715,"package_name":"coverage","ecosystem":"pypi","requirements":"7.6.7","direct":false,"kind":"runtime","optional":false},{"id":22393651716,"package_name":"cycler","ecosystem":"pypi","requirements":"0.12.1","direct":false,"kind":"runtime","optional":false},{"id":22393651717,"package_name":"cython","ecosystem":"pypi","requirements":"3.0.11","direct":false,"kind":"runtime","optional":false},{"id":22393651718,"package_name":"dask","ecosystem":"pypi","requirements":"2024.11.2","direct":false,"kind":"runtime","optional":false},{"id":22393651719,"package_name":"debugpy","ecosystem":"pypi","requirements":"1.8.8","direct":false,"kind":"runtime","optional":false},{"id":22393651720,"package_name":"decorator","ecosystem":"pypi","requirements":"5.1.1","direct":false,"kind":"runtime","optional":false},{"id":22393651721,"package_name":"defusedxml","ecosystem":"pypi","requirements":"0.7.1","direct":false,"kind":"runtime","optional":false},{"id":22393651722,"package_name":"dill","ecosystem":"pypi","requirements":"0.3.9","direct":false,"kind":"runtime","optional":false},{"id":22393651723,"package_name":"distlib","ecosystem":"pypi","requirements":"0.3.9","direct":false,"kind":"runtime","optional":false},{"id":22393651724,"package_name":"distributed","ecosystem":"pypi","requirements":"2024.11.2","direct":false,"kind":"runtime","optional":false},{"id":22393651725,"package_name":"docutils","ecosystem":"pypi","requirements":"0.21.2","direct":false,"kind":"runtime","optional":false},{"id":22393651726,"package_name":"dotmap","ecosystem":"pypi","requirements":"1.3.30","direct":false,"kind":"runtime","optional":false},{"id":22393651727,"package_name":"emcee","ecosystem":"pypi","requirements":"3.1.6","direct":false,"kind":"runtime","optional":false},{"id":22393651733,"package_name":"emukit","ecosystem":"pypi","requirements":"0.4.11","direct":false,"kind":"runtime","optional":false},{"id":22393651734,"package_name":"et-xmlfile","ecosystem":"pypi","requirements":"2.0.0","direct":false,"kind":"runtime","optional":false},{"id":22393651735,"package_name":"etuples","ecosystem":"pypi","requirements":"0.3.9","direct":false,"kind":"runtime","optional":false},{"id":22393651736,"package_name":"exceptiongroup","ecosystem":"pypi","requirements":"1.2.2","direct":false,"kind":"runtime","optional":false},{"id":22393651737,"package_name":"execnet","ecosystem":"pypi","requirements":"2.1.1","direct":false,"kind":"runtime","optional":false},{"id":22393651738,"package_name":"executing","ecosystem":"pypi","requirements":"2.1.0","direct":false,"kind":"runtime","optional":false},{"id":22393651739,"package_name":"fastjsonschema","ecosystem":"pypi","requirements":"2.20.0","direct":false,"kind":"runtime","optional":false},{"id":22393651740,"package_name":"filelock","ecosystem":"pypi","requirements":"3.16.1","direct":false,"kind":"runtime","optional":false},{"id":22393651741,"package_name":"folium","ecosystem":"pypi","requirements":"0.19.5","direct":false,"kind":"runtime","optional":false},{"id":22393651742,"package_name":"fonttools","ecosystem":"pypi","requirements":"4.55.0","direct":false,"kind":"runtime","optional":false},{"id":22393651743,"package_name":"fqdn","ecosystem":"pypi","requirements":"1.5.1","direct":false,"kind":"runtime","optional":false},{"id":22393651744,"package_name":"fsspec","ecosystem":"pypi","requirements":"2024.10.0","direct":false,"kind":"runtime","optional":false},{"id":22393651745,"package_name":"geopandas","ecosystem":"pypi","requirements":"1.0.1","direct":false,"kind":"runtime","optional":false},{"id":22393651746,"package_name":"gitdb","ecosystem":"pypi","requirements":"4.0.11","direct":false,"kind":"runtime","optional":false},{"id":22393651747,"package_name":"gitpython","ecosystem":"pypi","requirements":"3.1.43","direct":false,"kind":"runtime","optional":false},{"id":22393651748,"package_name":"gpy","ecosystem":"pypi","requirements":"1.13.2","direct":false,"kind":"runtime","optional":false},{"id":22393652150,"package_name":"gpytorch","ecosystem":"pypi","requirements":"1.13","direct":false,"kind":"runtime","optional":false},{"id":22393652151,"package_name":"graphviz","ecosystem":"pypi","requirements":"0.20.3","direct":false,"kind":"runtime","optional":false},{"id":22393652152,"package_name":"greenlet","ecosystem":"pypi","requirements":"3.1.1","direct":false,"kind":"runtime","optional":false},{"id":22393652153,"package_name":"grpcio","ecosystem":"pypi","requirements":"1.68.0","direct":false,"kind":"runtime","optional":false},{"id":22393652154,"package_name":"gstools","ecosystem":"pypi","requirements":"1.6.0","direct":false,"kind":"runtime","optional":false},{"id":22393652499,"package_name":"h11","ecosystem":"pypi","requirements":"0.14.0","direct":false,"kind":"runtime","optional":false},{"id":22393652500,"package_name":"h5netcdf","ecosystem":"pypi","requirements":"1.4.1","direct":false,"kind":"runtime","optional":false},{"id":22393652501,"package_name":"h5py","ecosystem":"pypi","requirements":"3.12.1","direct":false,"kind":"runtime","optional":false},{"id":22393652502,"package_name":"hankel","ecosystem":"pypi","requirements":"1.2.2","direct":false,"kind":"runtime","optional":false},{"id":22393652847,"package_name":"httpcore","ecosystem":"pypi","requirements":"1.0.7","direct":false,"kind":"runtime","optional":false},{"id":22393652848,"package_name":"httpx","ecosystem":"pypi","requirements":"0.28.0","direct":false,"kind":"runtime","optional":false},{"id":22393652849,"package_name":"humanize","ecosystem":"pypi","requirements":"4.12.1","direct":false,"kind":"runtime","optional":false},{"id":22393652850,"package_name":"hydra-core","ecosystem":"pypi","requirements":"1.3.2","direct":false,"kind":"runtime","optional":false},{"id":22393652851,"package_name":"identify","ecosystem":"pypi","requirements":"2.6.2","direct":false,"kind":"runtime","optional":false},{"id":22393652852,"package_name":"idna","ecosystem":"pypi","requirements":"3.10","direct":false,"kind":"runtime","optional":false},{"id":22393652853,"package_name":"imagesize","ecosystem":"pypi","requirements":"1.4.1","direct":false,"kind":"runtime","optional":false},{"id":22393652854,"package_name":"importlib-metadata","ecosystem":"pypi","requirements":"8.5.0","direct":false,"kind":"runtime","optional":false},{"id":22393652855,"package_name":"iniconfig","ecosystem":"pypi","requirements":"2.0.0","direct":false,"kind":"runtime","optional":false},{"id":22393652856,"package_name":"ipykernel","ecosystem":"pypi","requirements":"6.29.5","direct":false,"kind":"runtime","optional":false},{"id":22393652857,"package_name":"ipyleaflet","ecosystem":"pypi","requirements":"0.19.2","direct":false,"kind":"runtime","optional":false},{"id":22393652858,"package_name":"ipython","ecosystem":"pypi","requirements":"8.29.0","direct":false,"kind":"runtime","optional":false},{"id":22393652859,"package_name":"ipython-genutils","ecosystem":"pypi","requirements":"0.2.0","direct":false,"kind":"runtime","optional":false},{"id":22393652860,"package_name":"ipyvue","ecosystem":"pypi","requirements":"1.11.2","direct":false,"kind":"runtime","optional":false},{"id":22393652865,"package_name":"ipyvuetify","ecosystem":"pypi","requirements":"1.11.1","direct":false,"kind":"runtime","optional":false},{"id":22393652961,"package_name":"ipywidgets","ecosystem":"pypi","requirements":"8.1.5","direct":false,"kind":"runtime","optional":false},{"id":22393652962,"package_name":"isoduration","ecosystem":"pypi","requirements":"20.11.0","direct":false,"kind":"runtime","optional":false},{"id":22393652963,"package_name":"iteration-utilities","ecosystem":"pypi","requirements":"0.13.0","direct":false,"kind":"runtime","optional":false},{"id":22393653092,"package_name":"iterative-ensemble-smoother","ecosystem":"pypi","requirements":"0.2.7","direct":false,"kind":"runtime","optional":false},{"id":22393653104,"package_name":"jabbar","ecosystem":"pypi","requirements":"0.0.16","direct":false,"kind":"runtime","optional":false},{"id":22393654013,"package_name":"jaxtyping","ecosystem":"pypi","requirements":"0.2.19","direct":false,"kind":"runtime","optional":false},{"id":22393655326,"package_name":"jedi","ecosystem":"pypi","requirements":"0.19.2","direct":false,"kind":"runtime","optional":false},{"id":22393655327,"package_name":"jinja2","ecosystem":"pypi","requirements":"3.1.4","direct":false,"kind":"runtime","optional":false},{"id":22393655328,"package_name":"joblib","ecosystem":"pypi","requirements":"1.4.2","direct":false,"kind":"runtime","optional":false},{"id":22393655329,"package_name":"json5","ecosystem":"pypi","requirements":"0.10.0","direct":false,"kind":"runtime","optional":false},{"id":22393655330,"package_name":"jsonpointer","ecosystem":"pypi","requirements":"3.0.0","direct":false,"kind":"runtime","optional":false},{"id":22393655331,"package_name":"jsonschema","ecosystem":"pypi","requirements":"4.23.0","direct":false,"kind":"runtime","optional":false},{"id":22393655332,"package_name":"jsonschema-specifications","ecosystem":"pypi","requirements":"2024.10.1","direct":false,"kind":"runtime","optional":false},{"id":22393655333,"package_name":"jupyter-cache","ecosystem":"pypi","requirements":"1.0.1","direct":false,"kind":"runtime","optional":false},{"id":22393655612,"package_name":"jupyter-client","ecosystem":"pypi","requirements":"8.6.3","direct":false,"kind":"runtime","optional":false},{"id":22393655613,"package_name":"jupyter-core","ecosystem":"pypi","requirements":"5.7.2","direct":false,"kind":"runtime","optional":false},{"id":22393655614,"package_name":"jupyter-events","ecosystem":"pypi","requirements":"0.10.0","direct":false,"kind":"runtime","optional":false},{"id":22393655615,"package_name":"jupyter-leaflet","ecosystem":"pypi","requirements":"0.19.2","direct":false,"kind":"runtime","optional":false},{"id":22393655616,"package_name":"jupyter-lsp","ecosystem":"pypi","requirements":"2.2.5","direct":false,"kind":"runtime","optional":false},{"id":22393655617,"package_name":"jupyter-server","ecosystem":"pypi","requirements":"2.14.2","direct":false,"kind":"runtime","optional":false},{"id":22393655618,"package_name":"jupyter-server-terminals","ecosystem":"pypi","requirements":"0.5.3","direct":false,"kind":"runtime","optional":false},{"id":22393655619,"package_name":"jupyterlab","ecosystem":"pypi","requirements":"4.3.1","direct":false,"kind":"runtime","optional":false},{"id":22393655620,"package_name":"jupyterlab-pygments","ecosystem":"pypi","requirements":"0.3.0","direct":false,"kind":"runtime","optional":false},{"id":22393655621,"package_name":"jupyterlab-server","ecosystem":"pypi","requirements":"2.27.3","direct":false,"kind":"runtime","optional":false},{"id":22393655622,"package_name":"jupyterlab-widgets","ecosystem":"pypi","requirements":"3.0.13","direct":false,"kind":"runtime","optional":false},{"id":22393655623,"package_name":"kaleido","ecosystem":"pypi","requirements":"0.2.1","direct":false,"kind":"runtime","optional":false},{"id":22393655630,"package_name":"kiwisolver","ecosystem":"pypi","requirements":"1.4.7","direct":false,"kind":"runtime","optional":false},{"id":22393655631,"package_name":"kombu","ecosystem":"pypi","requirements":"5.4.2","direct":false,"kind":"runtime","optional":false},{"id":22393655632,"package_name":"lampe","ecosystem":"pypi","requirements":"0.9.0","direct":false,"kind":"runtime","optional":false},{"id":22393655634,"package_name":"libpysal","ecosystem":"pypi","requirements":"4.12.1","direct":false,"kind":"runtime","optional":false},{"id":22393655885,"package_name":"linear-operator","ecosystem":"pypi","requirements":"0.5.3","direct":false,"kind":"runtime","optional":false},{"id":22393655900,"package_name":"locket","ecosystem":"pypi","requirements":"1.0.0","direct":false,"kind":"runtime","optional":false},{"id":22393655901,"package_name":"logical-unification","ecosystem":"pypi","requirements":"0.4.6","direct":false,"kind":"runtime","optional":false},{"id":22393655902,"package_name":"makefun","ecosystem":"pypi","requirements":"1.15.6","direct":false,"kind":"runtime","optional":false},{"id":22393655916,"package_name":"mako","ecosystem":"pypi","requirements":"1.3.6","direct":false,"kind":"runtime","optional":false},{"id":22393655917,"package_name":"markdown","ecosystem":"pypi","requirements":"3.7","direct":false,"kind":"runtime","optional":false},{"id":22393655918,"package_name":"markdown-it-py","ecosystem":"pypi","requirements":"3.0.0","direct":false,"kind":"runtime","optional":false},{"id":22393655919,"package_name":"markupsafe","ecosystem":"pypi","requirements":"3.0.2","direct":false,"kind":"runtime","optional":false},{"id":22393655920,"package_name":"matplotlib","ecosystem":"pypi","requirements":"3.9.2","direct":false,"kind":"runtime","optional":false},{"id":22393655921,"package_name":"matplotlib-inline","ecosystem":"pypi","requirements":"0.1.7","direct":false,"kind":"runtime","optional":false},{"id":22393655922,"package_name":"mdit-py-plugins","ecosystem":"pypi","requirements":"0.4.2","direct":false,"kind":"runtime","optional":false},{"id":22393655923,"package_name":"mdurl","ecosystem":"pypi","requirements":"0.1.2","direct":false,"kind":"runtime","optional":false},{"id":22393655924,"package_name":"mesa","ecosystem":"pypi","requirements":"3.0.3","direct":false,"kind":"runtime","optional":false},{"id":22393656657,"package_name":"mesa-geo","ecosystem":"pypi","requirements":"0.9.1","direct":false,"kind":"runtime","optional":false},{"id":22393656828,"package_name":"meshio","ecosystem":"pypi","requirements":"5.3.5","direct":false,"kind":"runtime","optional":false},{"id":22393656857,"package_name":"minikanren","ecosystem":"pypi","requirements":"1.0.3","direct":false,"kind":"runtime","optional":false},{"id":22393656858,"package_name":"mistune","ecosystem":"pypi","requirements":"3.0.2","direct":false,"kind":"runtime","optional":false},{"id":22393656859,"package_name":"mpmath","ecosystem":"pypi","requirements":"1.3.0","direct":false,"kind":"runtime","optional":false},{"id":22393656860,"package_name":"msgpack","ecosystem":"pypi","requirements":"1.1.0","direct":false,"kind":"runtime","optional":false},{"id":22393656861,"package_name":"multipledispatch","ecosystem":"pypi","requirements":"1.0.0","direct":false,"kind":"runtime","optional":false},{"id":22393656862,"package_name":"multiprocess","ecosystem":"pypi","requirements":"0.70.17","direct":false,"kind":"runtime","optional":false},{"id":22393656863,"package_name":"mypy","ecosystem":"pypi","requirements":"1.13.0","direct":false,"kind":"runtime","optional":false},{"id":22393656864,"package_name":"mypy-extensions","ecosystem":"pypi","requirements":"1.0.0","direct":false,"kind":"runtime","optional":false},{"id":22393656865,"package_name":"myst-nb","ecosystem":"pypi","requirements":"1.1.2","direct":false,"kind":"runtime","optional":false},{"id":22393656896,"package_name":"myst-parser","ecosystem":"pypi","requirements":"4.0.0","direct":false,"kind":"runtime","optional":false},{"id":22393656897,"package_name":"nbclient","ecosystem":"pypi","requirements":"0.10.0","direct":false,"kind":"runtime","optional":false},{"id":22393656898,"package_name":"nbconvert","ecosystem":"pypi","requirements":"7.16.4","direct":false,"kind":"runtime","optional":false},{"id":22393656899,"package_name":"nbformat","ecosystem":"pypi","requirements":"5.10.4","direct":false,"kind":"runtime","optional":false},{"id":22393656900,"package_name":"nest-asyncio","ecosystem":"pypi","requirements":"1.6.0","direct":false,"kind":"runtime","optional":false},{"id":22393656901,"package_name":"networkx","ecosystem":"pypi","requirements":"3.4.2","direct":false,"kind":"runtime","optional":false},{"id":22393656902,"package_name":"nflows","ecosystem":"pypi","requirements":"0.14","direct":false,"kind":"runtime","optional":false},{"id":22393656903,"package_name":"nodeenv","ecosystem":"pypi","requirements":"1.9.1","direct":false,"kind":"runtime","optional":false},{"id":22393656904,"package_name":"notebook-shim","ecosystem":"pypi","requirements":"0.2.4","direct":false,"kind":"runtime","optional":false},{"id":22393656905,"package_name":"numpoly","ecosystem":"pypi","requirements":"1.2.14","direct":false,"kind":"runtime","optional":false},{"id":22393657173,"package_name":"numpy","ecosystem":"pypi","requirements":"1.26.4","direct":false,"kind":"runtime","optional":false},{"id":22393657174,"package_name":"nvidia-cublas-cu12","ecosystem":"pypi","requirements":"12.4.5.8","direct":false,"kind":"runtime","optional":false},{"id":22393657175,"package_name":"nvidia-cuda-cupti-cu12","ecosystem":"pypi","requirements":"12.4.127","direct":false,"kind":"runtime","optional":false},{"id":22393657176,"package_name":"nvidia-cuda-nvrtc-cu12","ecosystem":"pypi","requirements":"12.4.127","direct":false,"kind":"runtime","optional":false},{"id":22393657177,"package_name":"nvidia-cuda-runtime-cu12","ecosystem":"pypi","requirements":"12.4.127","direct":false,"kind":"runtime","optional":false},{"id":22393657178,"package_name":"nvidia-cudnn-cu12","ecosystem":"pypi","requirements":"9.1.0.70","direct":false,"kind":"runtime","optional":false},{"id":22393657179,"package_name":"nvidia-cufft-cu12","ecosystem":"pypi","requirements":"11.2.1.3","direct":false,"kind":"runtime","optional":false},{"id":22393657180,"package_name":"nvidia-curand-cu12","ecosystem":"pypi","requirements":"10.3.5.147","direct":false,"kind":"runtime","optional":false},{"id":22393657181,"package_name":"nvidia-cusolver-cu12","ecosystem":"pypi","requirements":"11.6.1.9","direct":false,"kind":"runtime","optional":false},{"id":22393657182,"package_name":"nvidia-cusparse-cu12","ecosystem":"pypi","requirements":"12.3.1.170","direct":false,"kind":"runtime","optional":false},{"id":22393657183,"package_name":"nvidia-nccl-cu12","ecosystem":"pypi","requirements":"2.21.5","direct":false,"kind":"runtime","optional":false},{"id":22393657184,"package_name":"nvidia-nvjitlink-cu12","ecosystem":"pypi","requirements":"12.4.127","direct":false,"kind":"runtime","optional":false},{"id":22393657185,"package_name":"nvidia-nvtx-cu12","ecosystem":"pypi","requirements":"12.4.127","direct":false,"kind":"runtime","optional":false},{"id":22393657186,"package_name":"omegaconf","ecosystem":"pypi","requirements":"2.3.0","direct":false,"kind":"runtime","optional":false},{"id":22393657187,"package_name":"openpyxl","ecosystem":"pypi","requirements":"3.1.5","direct":false,"kind":"runtime","optional":false},{"id":22393657188,"package_name":"openturns","ecosystem":"pypi","requirements":"1.23","direct":false,"kind":"runtime","optional":false},{"id":22393657212,"package_name":"opt-einsum","ecosystem":"pypi","requirements":"3.4.0","direct":false,"kind":"runtime","optional":false},{"id":22393657213,"package_name":"optuna","ecosystem":"pypi","requirements":"4.1.0","direct":false,"kind":"runtime","optional":false},{"id":22393657214,"package_name":"overrides","ecosystem":"pypi","requirements":"7.7.0","direct":false,"kind":"runtime","optional":false},{"id":22393657215,"package_name":"packaging","ecosystem":"pypi","requirements":"24.2","direct":false,"kind":"runtime","optional":false},{"id":22393657216,"package_name":"pandas","ecosystem":"pypi","requirements":"2.2.3","direct":false,"kind":"runtime","optional":false},{"id":22393657217,"package_name":"pandocfilters","ecosystem":"pypi","requirements":"1.5.1","direct":false,"kind":"runtime","optional":false},{"id":22393657218,"package_name":"paramz","ecosystem":"pypi","requirements":"0.9.6","direct":false,"kind":"runtime","optional":false},{"id":22393657220,"package_name":"parso","ecosystem":"pypi","requirements":"0.8.4","direct":false,"kind":"runtime","optional":false},{"id":22393657221,"package_name":"partd","ecosystem":"pypi","requirements":"1.4.2","direct":false,"kind":"runtime","optional":false},{"id":22393657222,"package_name":"pcse","ecosystem":"pypi","requirements":"6.0.9","direct":false,"kind":"runtime","optional":false},{"id":22393657224,"package_name":"pexpect","ecosystem":"pypi","requirements":"4.9.0","direct":false,"kind":"runtime","optional":false},{"id":22393657225,"package_name":"pillow","ecosystem":"pypi","requirements":"11.0.0","direct":false,"kind":"runtime","optional":false},{"id":22393657226,"package_name":"platformdirs","ecosystem":"pypi","requirements":"4.3.6","direct":false,"kind":"runtime","optional":false},{"id":22393657227,"package_name":"plotly","ecosystem":"pypi","requirements":"5.24.1","direct":false,"kind":"runtime","optional":false},{"id":22393657228,"package_name":"pluggy","ecosystem":"pypi","requirements":"1.5.0","direct":false,"kind":"runtime","optional":false},{"id":22393657229,"package_name":"pre-commit","ecosystem":"pypi","requirements":"4.0.1","direct":false,"kind":"runtime","optional":false},{"id":22393657230,"package_name":"prometheus-client","ecosystem":"pypi","requirements":"0.21.0","direct":false,"kind":"runtime","optional":false},{"id":22393657231,"package_name":"prompt-toolkit","ecosystem":"pypi","requirements":"3.0.48","direct":false,"kind":"runtime","optional":false},{"id":22393657232,"package_name":"protobuf","ecosystem":"pypi","requirements":"5.28.3","direct":false,"kind":"runtime","optional":false},{"id":22393657233,"package_name":"psutil","ecosystem":"pypi","requirements":"6.1.0","direct":false,"kind":"runtime","optional":false},{"id":22393657234,"package_name":"psycopg2-binary","ecosystem":"pypi","requirements":"2.9.10","direct":false,"kind":"runtime","optional":false},{"id":22393657235,"package_name":"ptyprocess","ecosystem":"pypi","requirements":"0.7.0","direct":false,"kind":"runtime","optional":false},{"id":22393657236,"package_name":"pure-eval","ecosystem":"pypi","requirements":"0.2.3","direct":false,"kind":"runtime","optional":false},{"id":22393657237,"package_name":"pyabc","ecosystem":"pypi","requirements":"0.12.15","direct":false,"kind":"runtime","optional":false},{"id":22393657239,"package_name":"pycparser","ecosystem":"pypi","requirements":"2.22","direct":false,"kind":"runtime","optional":false},{"id":22393657240,"package_name":"pydantic","ecosystem":"pypi","requirements":"2.9.2","direct":false,"kind":"runtime","optional":false},{"id":22393657241,"package_name":"pydantic-core","ecosystem":"pypi","requirements":"2.23.4","direct":false,"kind":"runtime","optional":false},{"id":22393657242,"package_name":"pydantic-settings","ecosystem":"pypi","requirements":"2.6.1","direct":false,"kind":"runtime","optional":false},{"id":22393657243,"package_name":"pyesmda","ecosystem":"pypi","requirements":"0.4.3","direct":false,"kind":"runtime","optional":false},{"id":22393657270,"package_name":"pyevtk","ecosystem":"pypi","requirements":"1.6.0","direct":false,"kind":"runtime","optional":false},{"id":22393657274,"package_name":"pygments","ecosystem":"pypi","requirements":"2.18.0","direct":false,"kind":"runtime","optional":false},{"id":22393657275,"package_name":"pygpc","ecosystem":"pypi","requirements":"0.4.1","direct":false,"kind":"runtime","optional":false},{"id":22393657391,"package_name":"pyknos","ecosystem":"pypi","requirements":"0.16.0","direct":false,"kind":"runtime","optional":false},{"id":22393657392,"package_name":"pymc","ecosystem":"pypi","requirements":"5.15.0","direct":false,"kind":"runtime","optional":false},{"id":22393657393,"package_name":"pymdown-extensions","ecosystem":"pypi","requirements":"10.14.3","direct":false,"kind":"runtime","optional":false},{"id":22393657394,"package_name":"pyogrio","ecosystem":"pypi","requirements":"0.10.0","direct":false,"kind":"runtime","optional":false},{"id":22393657395,"package_name":"pyparsing","ecosystem":"pypi","requirements":"3.2.0","direct":false,"kind":"runtime","optional":false},{"id":22393657396,"package_name":"pyproj","ecosystem":"pypi","requirements":"3.7.1","direct":false,"kind":"runtime","optional":false},{"id":22393657421,"package_name":"pyre-extensions","ecosystem":"pypi","requirements":"0.0.31","direct":false,"kind":"runtime","optional":false},{"id":22393657424,"package_name":"pyro-api","ecosystem":"pypi","requirements":"0.1.2","direct":false,"kind":"runtime","optional":false},{"id":22393657425,"package_name":"pyro-ppl","ecosystem":"pypi","requirements":"1.9.1","direct":false,"kind":"runtime","optional":false},{"id":22393657426,"package_name":"pytensor","ecosystem":"pypi","requirements":"2.20.0","direct":false,"kind":"runtime","optional":false},{"id":22393657427,"package_name":"pytest","ecosystem":"pypi","requirements":"8.3.3","direct":false,"kind":"runtime","optional":false},{"id":22393657428,"package_name":"pytest-cov","ecosystem":"pypi","requirements":"5.0.0","direct":false,"kind":"runtime","optional":false},{"id":22393657429,"package_name":"pytest-env","ecosystem":"pypi","requirements":"1.1.5","direct":false,"kind":"runtime","optional":false},{"id":22393657430,"package_name":"pytest-mock","ecosystem":"pypi","requirements":"3.14.0","direct":false,"kind":"runtime","optional":false},{"id":22393657431,"package_name":"pytest-xdist","ecosystem":"pypi","requirements":"3.6.1","direct":false,"kind":"runtime","optional":false},{"id":22393657432,"package_name":"python-dateutil","ecosystem":"pypi","requirements":"2.9.0.post0","direct":false,"kind":"runtime","optional":false},{"id":22393657433,"package_name":"python-dotenv","ecosystem":"pypi","requirements":"1.0.1","direct":false,"kind":"runtime","optional":false},{"id":22393657434,"package_name":"python-json-logger","ecosystem":"pypi","requirements":"2.0.7","direct":false,"kind":"runtime","optional":false},{"id":22393657435,"package_name":"pytz","ecosystem":"pypi","requirements":"2024.2","direct":false,"kind":"runtime","optional":false},{"id":22393657436,"package_name":"pywin32","ecosystem":"pypi","requirements":"308","direct":false,"kind":"runtime","optional":false},{"id":22393657437,"package_name":"pywinpty","ecosystem":"pypi","requirements":"2.0.14","direct":false,"kind":"runtime","optional":false},{"id":22393657438,"package_name":"pyyaml","ecosystem":"pypi","requirements":"6.0.2","direct":false,"kind":"runtime","optional":false},{"id":22393657439,"package_name":"pyzmq","ecosystem":"pypi","requirements":"26.2.0","direct":false,"kind":"runtime","optional":false},{"id":22393657440,"package_name":"rasterio","ecosystem":"pypi","requirements":"1.4.3","direct":false,"kind":"runtime","optional":false},{"id":22393657441,"package_name":"reacton","ecosystem":"pypi","requirements":"1.9.1","direct":false,"kind":"runtime","optional":false},{"id":22393657454,"package_name":"redis","ecosystem":"pypi","requirements":"5.2.0","direct":false,"kind":"runtime","optional":false},{"id":22393657455,"package_name":"referencing","ecosystem":"pypi","requirements":"0.35.1","direct":false,"kind":"runtime","optional":false},{"id":22393657456,"package_name":"requests","ecosystem":"pypi","requirements":"2.32.3","direct":false,"kind":"runtime","optional":false},{"id":22393657457,"package_name":"rfc3339-validator","ecosystem":"pypi","requirements":"0.1.4","direct":false,"kind":"runtime","optional":false},{"id":22393657458,"package_name":"rfc3986-validator","ecosystem":"pypi","requirements":"0.1.1","direct":false,"kind":"runtime","optional":false},{"id":22393657459,"package_name":"rich","ecosystem":"pypi","requirements":"13.9.4","direct":false,"kind":"runtime","optional":false},{"id":22393657460,"package_name":"rich-click","ecosystem":"pypi","requirements":"1.8.8","direct":false,"kind":"runtime","optional":false},{"id":22393657461,"package_name":"rpds-py","ecosystem":"pypi","requirements":"0.21.0","direct":false,"kind":"runtime","optional":false},{"id":22393657462,"package_name":"rtree","ecosystem":"pypi","requirements":"1.4.0","direct":false,"kind":"runtime","optional":false},{"id":22393657463,"package_name":"ruff","ecosystem":"pypi","requirements":"0.7.4","direct":false,"kind":"runtime","optional":false},{"id":22393657464,"package_name":"salib","ecosystem":"pypi","requirements":"1.5.1","direct":false,"kind":"runtime","optional":false},{"id":22393658057,"package_name":"sbi","ecosystem":"pypi","requirements":"0.22.0","direct":false,"kind":"runtime","optional":false},{"id":22393658058,"package_name":"scikit-activeml","ecosystem":"pypi","requirements":"0.5.2","direct":false,"kind":"runtime","optional":false},{"id":22393658106,"package_name":"scikit-learn","ecosystem":"pypi","requirements":"1.5.2","direct":false,"kind":"runtime","optional":false},{"id":22393658107,"package_name":"scipy","ecosystem":"pypi","requirements":"1.11.4","direct":false,"kind":"runtime","optional":false},{"id":22393658108,"package_name":"seaborn","ecosystem":"pypi","requirements":"0.13.2","direct":false,"kind":"runtime","optional":false},{"id":22393658109,"package_name":"send2trash","ecosystem":"pypi","requirements":"1.8.3","direct":false,"kind":"runtime","optional":false},{"id":22393658110,"package_name":"setuptools","ecosystem":"pypi","requirements":"75.5.0","direct":false,"kind":"runtime","optional":false},{"id":22393658111,"package_name":"shapely","ecosystem":"pypi","requirements":"2.0.7","direct":false,"kind":"runtime","optional":false},{"id":22393658112,"package_name":"six","ecosystem":"pypi","requirements":"1.16.0","direct":false,"kind":"runtime","optional":false},{"id":22393658113,"package_name":"skorch","ecosystem":"pypi","requirements":"1.0.0","direct":false,"kind":"runtime","optional":false},{"id":22393658115,"package_name":"smmap","ecosystem":"pypi","requirements":"5.0.1","direct":false,"kind":"runtime","optional":false},{"id":22393658116,"package_name":"sniffio","ecosystem":"pypi","requirements":"1.3.1","direct":false,"kind":"runtime","optional":false},{"id":22393658117,"package_name":"snowballstemmer","ecosystem":"pypi","requirements":"2.2.0","direct":false,"kind":"runtime","optional":false},{"id":22393658118,"package_name":"solara","ecosystem":"pypi","requirements":"1.44.1","direct":false,"kind":"runtime","optional":false},{"id":22393659217,"package_name":"solara-server","ecosystem":"pypi","requirements":"1.44.1","direct":false,"kind":"runtime","optional":false},{"id":22393659325,"package_name":"solara-ui","ecosystem":"pypi","requirements":"1.44.1","direct":false,"kind":"runtime","optional":false},{"id":22393659326,"package_name":"sortedcontainers","ecosystem":"pypi","requirements":"2.4.0","direct":false,"kind":"runtime","optional":false},{"id":22393659327,"package_name":"soupsieve","ecosystem":"pypi","requirements":"2.6","direct":false,"kind":"runtime","optional":false},{"id":22393659328,"package_name":"sphinx","ecosystem":"pypi","requirements":"8.1.3","direct":false,"kind":"runtime","optional":false},{"id":22393659329,"package_name":"sphinx-argparse","ecosystem":"pypi","requirements":"0.5.2","direct":false,"kind":"runtime","optional":false},{"id":22393659462,"package_name":"sphinx-rtd-theme","ecosystem":"pypi","requirements":"3.0.2","direct":false,"kind":"runtime","optional":false},{"id":22393659463,"package_name":"sphinxcontrib-applehelp","ecosystem":"pypi","requirements":"2.0.0","direct":false,"kind":"runtime","optional":false},{"id":22393659464,"package_name":"sphinxcontrib-devhelp","ecosystem":"pypi","requirements":"2.0.0","direct":false,"kind":"runtime","optional":false},{"id":22393659465,"package_name":"sphinxcontrib-htmlhelp","ecosystem":"pypi","requirements":"2.1.0","direct":false,"kind":"runtime","optional":false},{"id":22393659466,"package_name":"sphinxcontrib-jquery","ecosystem":"pypi","requirements":"4.1","direct":false,"kind":"runtime","optional":false},{"id":22393659467,"package_name":"sphinxcontrib-jsmath","ecosystem":"pypi","requirements":"1.0.1","direct":false,"kind":"runtime","optional":false},{"id":22393659468,"package_name":"sphinxcontrib-qthelp","ecosystem":"pypi","requirements":"2.0.0","direct":false,"kind":"runtime","optional":false},{"id":22393659469,"package_name":"sphinxcontrib-serializinghtml","ecosystem":"pypi","requirements":"2.0.0","direct":false,"kind":"runtime","optional":false},{"id":22393659470,"package_name":"spotpy","ecosystem":"pypi","requirements":"1.6.2","direct":false,"kind":"runtime","optional":false},{"id":22393659502,"package_name":"sqlalchemy","ecosystem":"pypi","requirements":"1.4.54","direct":false,"kind":"runtime","optional":false},{"id":22393659503,"package_name":"stack-data","ecosystem":"pypi","requirements":"0.6.3","direct":false,"kind":"runtime","optional":false},{"id":22393659504,"package_name":"starlette","ecosystem":"pypi","requirements":"0.46.1","direct":false,"kind":"runtime","optional":false},{"id":22393659505,"package_name":"sympy","ecosystem":"pypi","requirements":"1.13.1","direct":false,"kind":"runtime","optional":false},{"id":22393659506,"package_name":"tabulate","ecosystem":"pypi","requirements":"0.9.0","direct":false,"kind":"runtime","optional":false},{"id":22393659507,"package_name":"tblib","ecosystem":"pypi","requirements":"3.0.0","direct":false,"kind":"runtime","optional":false},{"id":22393659508,"package_name":"tenacity","ecosystem":"pypi","requirements":"9.0.0","direct":false,"kind":"runtime","optional":false},{"id":22393659509,"package_name":"tensorboard","ecosystem":"pypi","requirements":"2.18.0","direct":false,"kind":"runtime","optional":false},{"id":22393659510,"package_name":"tensorboard-data-server","ecosystem":"pypi","requirements":"0.7.2","direct":false,"kind":"runtime","optional":false},{"id":22393659511,"package_name":"terminado","ecosystem":"pypi","requirements":"0.18.1","direct":false,"kind":"runtime","optional":false},{"id":22393659512,"package_name":"threadpoolctl","ecosystem":"pypi","requirements":"3.5.0","direct":false,"kind":"runtime","optional":false},{"id":22393659513,"package_name":"tinycss2","ecosystem":"pypi","requirements":"1.4.0","direct":false,"kind":"runtime","optional":false},{"id":22393659514,"package_name":"tomli","ecosystem":"pypi","requirements":"2.1.0","direct":false,"kind":"runtime","optional":false},{"id":22393659515,"package_name":"toolz","ecosystem":"pypi","requirements":"1.0.0","direct":false,"kind":"runtime","optional":false},{"id":22393659516,"package_name":"torch","ecosystem":"pypi","requirements":"2.5.1","direct":false,"kind":"runtime","optional":false},{"id":22393659517,"package_name":"tornado","ecosystem":"pypi","requirements":"6.4.1","direct":false,"kind":"runtime","optional":false},{"id":22393659518,"package_name":"tqdm","ecosystem":"pypi","requirements":"4.67.0","direct":false,"kind":"runtime","optional":false},{"id":22393659519,"package_name":"traitlets","ecosystem":"pypi","requirements":"5.14.3","direct":false,"kind":"runtime","optional":false},{"id":22393659520,"package_name":"traitlets-pcse","ecosystem":"pypi","requirements":"5.0.0.dev","direct":false,"kind":"runtime","optional":false},{"id":22393659522,"package_name":"traittypes","ecosystem":"pypi","requirements":"0.2.1","direct":false,"kind":"runtime","optional":false},{"id":22393659902,"package_name":"triton","ecosystem":"pypi","requirements":"3.1.0","direct":false,"kind":"runtime","optional":false},{"id":22393659903,"package_name":"typeguard","ecosystem":"pypi","requirements":"4.4.1","direct":false,"kind":"runtime","optional":false},{"id":22393659904,"package_name":"types-python-dateutil","ecosystem":"pypi","requirements":"2.9.0.20241003","direct":false,"kind":"runtime","optional":false},{"id":22393659905,"package_name":"types-pyyaml","ecosystem":"pypi","requirements":"6.0.12.20240917","direct":false,"kind":"runtime","optional":false},{"id":22393659906,"package_name":"typing-extensions","ecosystem":"pypi","requirements":"4.12.2","direct":false,"kind":"runtime","optional":false},{"id":22393659907,"package_name":"typing-inspect","ecosystem":"pypi","requirements":"0.9.0","direct":false,"kind":"runtime","optional":false},{"id":22393659908,"package_name":"tzdata","ecosystem":"pypi","requirements":"2024.2","direct":false,"kind":"runtime","optional":false},{"id":22393659909,"package_name":"uri-template","ecosystem":"pypi","requirements":"1.3.0","direct":false,"kind":"runtime","optional":false},{"id":22393659910,"package_name":"urllib3","ecosystem":"pypi","requirements":"2.2.3","direct":false,"kind":"runtime","optional":false},{"id":22393659911,"package_name":"uvicorn","ecosystem":"pypi","requirements":"0.34.0","direct":false,"kind":"runtime","optional":false},{"id":22393659912,"package_name":"vine","ecosystem":"pypi","requirements":"5.1.0","direct":false,"kind":"runtime","optional":false},{"id":22393659913,"package_name":"virtualenv","ecosystem":"pypi","requirements":"20.27.1","direct":false,"kind":"runtime","optional":false},{"id":22393659914,"package_name":"watchdog","ecosystem":"pypi","requirements":"6.0.0","direct":false,"kind":"runtime","optional":false},{"id":22393659997,"package_name":"watchfiles","ecosystem":"pypi","requirements":"1.0.4","direct":false,"kind":"runtime","optional":false},{"id":22393659998,"package_name":"wcwidth","ecosystem":"pypi","requirements":"0.2.13","direct":false,"kind":"runtime","optional":false},{"id":22393659999,"package_name":"webcolors","ecosystem":"pypi","requirements":"24.11.1","direct":false,"kind":"runtime","optional":false},{"id":22393660000,"package_name":"webencodings","ecosystem":"pypi","requirements":"0.5.1","direct":false,"kind":"runtime","optional":false},{"id":22393660001,"package_name":"websocket-client","ecosystem":"pypi","requirements":"1.8.0","direct":false,"kind":"runtime","optional":false},{"id":22393660002,"package_name":"websockets","ecosystem":"pypi","requirements":"15.0.1","direct":false,"kind":"runtime","optional":false},{"id":22393660003,"package_name":"werkzeug","ecosystem":"pypi","requirements":"3.1.3","direct":false,"kind":"runtime","optional":false},{"id":22393660004,"package_name":"widgetsnbextension","ecosystem":"pypi","requirements":"4.0.13","direct":false,"kind":"runtime","optional":false},{"id":22393660005,"package_name":"xarray","ecosystem":"pypi","requirements":"2024.10.0","direct":false,"kind":"runtime","optional":false},{"id":22393660006,"package_name":"xarray-einstats","ecosystem":"pypi","requirements":"0.8.0","direct":false,"kind":"runtime","optional":false},{"id":22393660007,"package_name":"xyzservices","ecosystem":"pypi","requirements":"2025.1.0","direct":false,"kind":"runtime","optional":false},{"id":22393660008,"package_name":"zict","ecosystem":"pypi","requirements":"3.0.0","direct":false,"kind":"runtime","optional":false},{"id":22393660009,"package_name":"zipp","ecosystem":"pypi","requirements":"3.21.0","direct":false,"kind":"runtime","optional":false},{"id":22393660010,"package_name":"zuko","ecosystem":"pypi","requirements":"1.3.0","direct":false,"kind":"runtime","optional":false}]},{"ecosystem":"pypi","filepath":"pyproject.toml","sha":null,"kind":"manifest","created_at":"2025-03-24T05:26:20.686Z","updated_at":"2025-03-24T05:26:20.686Z","repository_link":"https://github.com/Plant-Food-Research-Open/calisim/blob/main/pyproject.toml","dependencies":[{"id":22393660015,"package_name":"python","ecosystem":"pypi","requirements":"\u003e=3.10,\u003c3.11","direct":true,"kind":"runtime","optional":false},{"id":22393660016,"package_name":"kaleido","ecosystem":"pypi","requirements":"0.2.1","direct":true,"kind":"runtime","optional":false},{"id":22393660017,"package_name":"scikit-learn","ecosystem":"pypi","requirements":"^1.5.2","direct":true,"kind":"runtime","optional":false},{"id":22393660018,"package_name":"numpy","ecosystem":"pypi","requirements":"\u003c2.0.0","direct":true,"kind":"runtime","optional":false},{"id":22393660019,"package_name":"pandas","ecosystem":"pypi","requirements":"^2.2.3","direct":true,"kind":"runtime","optional":false},{"id":22393660020,"package_name":"networkx","ecosystem":"pypi","requirements":"^3.4.1","direct":true,"kind":"runtime","optional":false},{"id":22393660021,"package_name":"pillow","ecosystem":"pypi","requirements":"^11.0.0","direct":true,"kind":"runtime","optional":false},{"id":22393660022,"package_name":"scipy","ecosystem":"pypi","requirements":"\u003c1.12.0","direct":true,"kind":"runtime","optional":false},{"id":22393660023,"package_name":"joblib","ecosystem":"pypi","requirements":"^1.4.2","direct":true,"kind":"runtime","optional":false},{"id":22393660024,"package_name":"sqlalchemy","ecosystem":"pypi","requirements":"\u003c2.0.36","direct":true,"kind":"runtime","optional":false},{"id":22393660025,"package_name":"alembic","ecosystem":"pypi","requirements":"^1.13.3","direct":true,"kind":"runtime","optional":false},{"id":22393660026,"package_name":"celery","ecosystem":"pypi","requirements":"^5.4.0","direct":true,"kind":"runtime","optional":false},{"id":22393660027,"package_name":"graphviz","ecosystem":"pypi","requirements":"^0.20.3","direct":true,"kind":"runtime","optional":false},{"id":22393660028,"package_name":"pyyaml","ecosystem":"pypi","requirements":"^6.0.2","direct":true,"kind":"runtime","optional":false},{"id":22393660029,"package_name":"pydantic","ecosystem":"pypi","requirements":"^2.9.2","direct":true,"kind":"runtime","optional":false},{"id":22393660030,"package_name":"optuna","ecosystem":"pypi","requirements":"^4.0.0","direct":true,"kind":"runtime","optional":false},{"id":22393660031,"package_name":"psycopg2-binary","ecosystem":"pypi","requirements":"^2.9.10","direct":true,"kind":"runtime","optional":false},{"id":22393660032,"package_name":"arviz","ecosystem":"pypi","requirements":"^0.20.0","direct":true,"kind":"runtime","optional":false},{"id":22393660033,"package_name":"salib","ecosystem":"pypi","requirements":"^1.5.1","direct":true,"kind":"runtime","optional":false},{"id":22393660034,"package_name":"matplotlib","ecosystem":"pypi","requirements":"^3.9.2","direct":true,"kind":"runtime","optional":false},{"id":22393660035,"package_name":"pyabc","ecosystem":"pypi","requirements":"^0.12.13","direct":true,"kind":"runtime","optional":false},{"id":22393660036,"package_name":"iterative-ensemble-smoother","ecosystem":"pypi","requirements":"^0.2.6","direct":true,"kind":"runtime","optional":false},{"id":22393660037,"package_name":"pymc","ecosystem":"pypi","requirements":"\u003c=5.16.2","direct":true,"kind":"runtime","optional":false},{"id":22393660038,"package_name":"pytensor","ecosystem":"pypi","requirements":"\u003c=2.20.0","direct":true,"kind":"runtime","optional":false},{"id":22393660039,"package_name":"plotly","ecosystem":"pypi","requirements":"^5.24.1","direct":true,"kind":"runtime","optional":false},{"id":22393660040,"package_name":"scikit-activeml","ecosystem":"pypi","requirements":"^0.5.2","direct":true,"kind":"runtime","optional":false},{"id":22393660041,"package_name":"pyesmda","ecosystem":"pypi","requirements":"^0.4.3","direct":true,"kind":"runtime","optional":false},{"id":22393660042,"package_name":"emukit","ecosystem":"pypi","requirements":"^0.4.11","direct":true,"kind":"runtime","optional":false},{"id":22393660043,"package_name":"emcee","ecosystem":"pypi","requirements":"^3.1.6","direct":true,"kind":"runtime","optional":false},{"id":22393660044,"package_name":"gpy","ecosystem":"pypi","requirements":"^1.13.2","direct":true,"kind":"runtime","optional":false},{"id":22393660045,"package_name":"spotpy","ecosystem":"pypi","requirements":"^1.6.2","direct":true,"kind":"runtime","optional":false},{"id":22393660046,"package_name":"pygpc","ecosystem":"pypi","requirements":"^0.4.1","direct":true,"kind":"runtime","optional":false},{"id":22393660047,"package_name":"chaospy","ecosystem":"pypi","requirements":"^4.3.17","direct":true,"kind":"runtime","optional":false},{"id":22393660048,"package_name":"gstools","ecosystem":"pypi","requirements":"^1.6.0","direct":true,"kind":"runtime","optional":false},{"id":22393660049,"package_name":"seaborn","ecosystem":"pypi","requirements":"^0.13.2","direct":true,"kind":"runtime","optional":false},{"id":22393660050,"package_name":"openturns","ecosystem":"pypi","requirements":"^1.23","direct":true,"kind":"runtime","optional":false},{"id":22393660051,"package_name":"numpoly","ecosystem":"pypi","requirements":"\u003c= 1.2.14","direct":true,"kind":"runtime","optional":false},{"id":22393660052,"package_name":"corner","ecosystem":"pypi","requirements":"^2.2.3","direct":true,"kind":"runtime","optional":false},{"id":22393660053,"package_name":"sbi","ecosystem":"pypi","requirements":"\u003c=0.22.0","direct":true,"kind":"runtime","optional":false},{"id":22393660054,"package_name":"torch","ecosystem":"pypi","requirements":"^2.5.0","direct":true,"kind":"runtime","optional":false},{"id":22393660055,"package_name":"pyro-ppl","ecosystem":"pypi","requirements":"^1.9.1","direct":true,"kind":"runtime","optional":false},{"id":22393660056,"package_name":"pyro-api","ecosystem":"pypi","requirements":"^0.1.2","direct":true,"kind":"runtime","optional":false},{"id":22393660057,"package_name":"nflows","ecosystem":"pypi","requirements":"^0.14","direct":true,"kind":"runtime","optional":false},{"id":22393660058,"package_name":"tensorboard","ecosystem":"pypi","requirements":"^2.18.0","direct":true,"kind":"runtime","optional":false},{"id":22393660059,"package_name":"gpytorch","ecosystem":"pypi","requirements":"^1.13","direct":true,"kind":"runtime","optional":false},{"id":22393660060,"package_name":"botorch","ecosystem":"pypi","requirements":"^0.12.0","direct":true,"kind":"runtime","optional":false},{"id":22393660061,"package_name":"lampe","ecosystem":"pypi","requirements":"^0.9.0","direct":true,"kind":"runtime","optional":false},{"id":22393660062,"package_name":"zuko","ecosystem":"pypi","requirements":"^1.3.0","direct":true,"kind":"runtime","optional":false},{"id":22393660063,"package_name":"ax-platform","ecosystem":"pypi","requirements":"^0.4.3","direct":true,"kind":"runtime","optional":false},{"id":22393660064,"package_name":"skorch","ecosystem":"pypi","requirements":"^1.0.0","direct":true,"kind":"runtime","optional":false},{"id":22393660065,"package_name":"mesa","ecosystem":"pypi","requirements":"\u003c3.1.4","direct":true,"kind":"runtime","optional":false},{"id":22393660066,"package_name":"mesa-geo","ecosystem":"pypi","requirements":"^0.9.1","direct":true,"kind":"runtime","optional":false},{"id":22393660067,"package_name":"pcse","ecosystem":"pypi","requirements":"^6.0.9","direct":true,"kind":"runtime","optional":false},{"id":22393660068,"package_name":"hydra-core","ecosystem":"pypi","requirements":"^1.3.2","direct":true,"kind":"runtime","optional":false},{"id":22393660069,"package_name":"sphinx-rtd-theme","ecosystem":"pypi","requirements":"^3.0.1","direct":true,"kind":"docs","optional":false},{"id":22393660070,"package_name":"sphinx","ecosystem":"pypi","requirements":"^8.1.3","direct":true,"kind":"docs","optional":false},{"id":22393660071,"package_name":"sphinx-argparse","ecosystem":"pypi","requirements":"^0.5.2","direct":true,"kind":"docs","optional":false},{"id":22393660072,"package_name":"sphinxcontrib-applehelp","ecosystem":"pypi","requirements":"^2.0.0","direct":true,"kind":"docs","optional":false},{"id":22393660073,"package_name":"sphinxcontrib-devhelp","ecosystem":"pypi","requirements":"^2.0.0","direct":true,"kind":"docs","optional":false},{"id":22393660074,"package_name":"sphinxcontrib-htmlhelp","ecosystem":"pypi","requirements":"^2.1.0","direct":true,"kind":"docs","optional":false},{"id":22393660075,"package_name":"sphinxcontrib-jsmath","ecosystem":"pypi","requirements":"^1.0.1","direct":true,"kind":"docs","optional":false},{"id":22393660076,"package_name":"sphinxcontrib-qthelp","ecosystem":"pypi","requirements":"^2.0.0","direct":true,"kind":"docs","optional":false},{"id":22393660077,"package_name":"sphinxcontrib-serializinghtml","ecosystem":"pypi","requirements":"^2.0.0","direct":true,"kind":"docs","optional":false},{"id":22393660078,"package_name":"autodoc-pydantic","ecosystem":"pypi","requirements":"^2.2.0","direct":true,"kind":"docs","optional":false},{"id":22393660079,"package_name":"myst-nb","ecosystem":"pypi","requirements":"^1.1.2","direct":true,"kind":"docs","optional":false},{"id":22393660080,"package_name":"ipython","ecosystem":"pypi","requirements":"^8.28.0","direct":true,"kind":"develop","optional":false},{"id":22393660081,"package_name":"ipywidgets","ecosystem":"pypi","requirements":"^8.1.5","direct":true,"kind":"develop","optional":false},{"id":22393660082,"package_name":"jupyter-core","ecosystem":"pypi","requirements":"^5.7.2","direct":true,"kind":"develop","optional":false},{"id":22393660083,"package_name":"pytest","ecosystem":"pypi","requirements":"^8.3.3","direct":true,"kind":"develop","optional":false},{"id":22393660084,"package_name":"coverage","ecosystem":"pypi","requirements":"^7.6.3","direct":true,"kind":"develop","optional":false},{"id":22393660085,"package_name":"pre-commit","ecosystem":"pypi","requirements":"^4.0.1","direct":true,"kind":"develop","optional":false},{"id":22393660086,"package_name":"pytest-cov","ecosystem":"pypi","requirements":"^5.0.0","direct":true,"kind":"develop","optional":false},{"id":22393660087,"package_name":"mypy","ecosystem":"pypi","requirements":"^1.12.0","direct":true,"kind":"develop","optional":false},{"id":22393660088,"package_name":"pytest-mock","ecosystem":"pypi","requirements":"^3.14.0","direct":true,"kind":"develop","optional":false},{"id":22393660089,"package_name":"pytest-xdist","ecosystem":"pypi","requirements":"^3.6.1","direct":true,"kind":"develop","optional":false},{"id":22393660090,"package_name":"pytest-env","ecosystem":"pypi","requirements":"^1.1.5","direct":true,"kind":"develop","optional":false},{"id":22393660091,"package_name":"types-pyyaml","ecosystem":"pypi","requirements":"^6.0.12.20240917","direct":true,"kind":"develop","optional":false},{"id":22393660092,"package_name":"ruff","ecosystem":"pypi","requirements":"^0.7.0","direct":true,"kind":"develop","optional":false},{"id":22393660093,"package_name":"jupyterlab","ecosystem":"pypi","requirements":"^4.3.1","direct":true,"kind":"develop","optional":false}]}],"score":null,"created_at":"2025-09-04T15:51:28.806Z","updated_at":"2025-10-07T08:20:51.178Z","avatar_url":"https://github.com/Plant-Food-Research-Open.png","language":"Python","category":null,"sub_category":null,"monthly_downloads":78,"funding_links":[],"readme_doi_urls":[],"works":{},"citation_counts":{},"total_citations":0,"keywords_from_contributors":[],"project_url":"https://science.ecosyste.ms/api/v1/projects/53145","html_url":"https://science.ecosyste.ms/projects/53145","bibtex_url":"https://science.ecosyste.ms/projects/53145/export.bibtex","apalike_url":"https://science.ecosyste.ms/projects/53145/export.apalike"}