{"id":5599,"name":"sparcrna_viz","description":"Single Cell RNA-sequencing differential expression analysis and interactive visualization service on oSparc","url":"https://github.com/sparc-fair-codeathon/sparcrna_viz","last_synced_at":"2025-09-04T18:45:29.946Z","repository":{"id":252893023,"uuid":"839042935","full_name":"SPARC-FAIR-Codeathon/sPARcRNA_Viz","owner":"SPARC-FAIR-Codeathon","description":"Single Cell RNA-sequencing differential expression analysis and interactive visualization service on oSparc","archived":false,"fork":false,"pushed_at":"2024-08-13T03:58:21.000Z","size":11147,"stargazers_count":0,"open_issues_count":0,"forks_count":0,"subscribers_count":4,"default_branch":"main","last_synced_at":"2025-09-01T00:43:46.742Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":"","language":"R","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"mit","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/SPARC-FAIR-Codeathon.png","metadata":{"files":{"readme":"README.md","changelog":"CHANGELOG.md","contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":"CITATION.cff","codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":"codemeta.json","zenodo":null}},"created_at":"2024-08-06T21:06:43.000Z","updated_at":"2024-08-22T10:25:39.000Z","dependencies_parsed_at":"2024-08-13T06:50:01.277Z","dependency_job_id":null,"html_url":"https://github.com/SPARC-FAIR-Codeathon/sPARcRNA_Viz","commit_stats":null,"previous_names":["sparc-fair-codeathon/sparcrna_viz"],"tags_count":1,"template":false,"template_full_name":null,"purl":"pkg:github/SPARC-FAIR-Codeathon/sPARcRNA_Viz","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/SPARC-FAIR-Codeathon%2FsPARcRNA_Viz","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/SPARC-FAIR-Codeathon%2FsPARcRNA_Viz/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/SPARC-FAIR-Codeathon%2FsPARcRNA_Viz/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/SPARC-FAIR-Codeathon%2FsPARcRNA_Viz/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/SPARC-FAIR-Codeathon","download_url":"https://codeload.github.com/SPARC-FAIR-Codeathon/sPARcRNA_Viz/tar.gz/refs/heads/main","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/SPARC-FAIR-Codeathon%2FsPARcRNA_Viz/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":273656510,"owners_count":25145001,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-09-04T02:00:08.968Z","response_time":61,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"owner":{"login":"SPARC-FAIR-Codeathon","name":"SPARC FAIR Codeathon","uuid":"86933347","kind":"organization","description":"Organisation to manage the 2021 SPARC FAIR Codeathon projects","email":null,"website":"https://sparc.science/help/2021-sparc-fair-codeathon","location":null,"twitter":null,"company":null,"icon_url":"https://avatars.githubusercontent.com/u/86933347?v=4","repositories_count":11,"last_synced_at":"2023-03-06T18:40:58.339Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/SPARC-FAIR-Codeathon","funding_links":[],"total_stars":null,"followers":null,"following":null,"created_at":"2022-11-16T20:06:40.420Z","updated_at":"2023-03-06T18:40:58.366Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/SPARC-FAIR-Codeathon","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/SPARC-FAIR-Codeathon/repositories"},"packages":[],"commits":{"message":"Repository syncing started."},"issues_stats":{"full_name":"sparc-fair-codeathon/sparcrna_viz","html_url":"https://github.com/sparc-fair-codeathon/sparcrna_viz","last_synced_at":null,"status":null,"issues_count":null,"pull_requests_count":null,"avg_time_to_close_issue":null,"avg_time_to_close_pull_request":null,"issues_closed_count":null,"pull_requests_closed_count":null,"pull_request_authors_count":null,"issue_authors_count":null,"avg_comments_per_issue":null,"avg_comments_per_pull_request":null,"merged_pull_requests_count":null,"bot_issues_count":null,"bot_pull_requests_count":null,"past_year_issues_count":null,"past_year_pull_requests_count":null,"past_year_avg_time_to_close_issue":null,"past_year_avg_time_to_close_pull_request":null,"past_year_issues_closed_count":null,"past_year_pull_requests_closed_count":null,"past_year_pull_request_authors_count":null,"past_year_issue_authors_count":null,"past_year_avg_comments_per_issue":null,"past_year_avg_comments_per_pull_request":null,"past_year_bot_issues_count":null,"past_year_bot_pull_requests_count":null,"past_year_merged_pull_requests_count":null,"created_at":"2025-09-04T18:44:52.161Z","updated_at":"2025-09-04T18:44:52.161Z","repository_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/sparc-fair-codeathon%2Fsparcrna_viz","issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/sparc-fair-codeathon%2Fsparcrna_viz/issues","issue_labels_count":{},"pull_request_labels_count":{},"issue_author_associations_count":{},"pull_request_author_associations_count":{},"issue_authors":{},"pull_request_authors":{},"host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-04T00:00:25.939Z","repositories_count":10081478,"issues_count":31331220,"pull_requests_count":96240505,"authors_count":10693617,"icon_url":"https://github.com/github.png","host_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories","owners_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/owners","authors_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors"},"past_year_issue_labels_count":{},"past_year_pull_request_labels_count":{},"past_year_issue_author_associations_count":{},"past_year_pull_request_author_associations_count":{},"past_year_issue_authors":{},"past_year_pull_request_authors":{},"maintainers":[],"active_maintainers":[]},"events":{"total":{},"last_year":{}},"keywords":[],"dependencies":[{"ecosystem":"actions","filepath":".github/workflows/check-image.yml","sha":null,"kind":"manifest","created_at":"2024-08-13T06:49:59.221Z","updated_at":"2024-08-13T06:49:59.221Z","repository_link":"https://github.com/SPARC-FAIR-Codeathon/sPARcRNA_Viz/blob/main/.github/workflows/check-image.yml","dependencies":[{"id":19670751560,"package_name":"actions/checkout","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":19670751561,"package_name":"docker://itisfoundation/ci-service-integration-library","ecosystem":"actions","requirements":"v1.0.4","direct":true,"kind":"composite","optional":false}]},{"ecosystem":"docker","filepath":".osparc/docker-compose.overwrite.yml","sha":null,"kind":"manifest","created_at":"2024-08-13T06:50:00.099Z","updated_at":"2024-08-13T06:50:00.099Z","repository_link":"https://github.com/SPARC-FAIR-Codeathon/sPARcRNA_Viz/blob/main/.osparc/docker-compose.overwrite.yml","dependencies":[]},{"ecosystem":"docker","filepath":"docker/Dockerfile","sha":null,"kind":"manifest","created_at":"2024-08-13T06:50:00.487Z","updated_at":"2024-08-13T06:50:00.487Z","repository_link":"https://github.com/SPARC-FAIR-Codeathon/sPARcRNA_Viz/blob/main/docker/Dockerfile","dependencies":[{"id":19670752452,"package_name":"ubuntu","ecosystem":"docker","requirements":"24.04","direct":true,"kind":"build","optional":false}]},{"ecosystem":"docker","filepath":"docker-compose-local.yml","sha":null,"kind":"manifest","created_at":"2024-08-13T06:50:00.826Z","updated_at":"2024-08-13T06:50:00.826Z","repository_link":"https://github.com/SPARC-FAIR-Codeathon/sPARcRNA_Viz/blob/main/docker-compose-local.yml","dependencies":[{"id":19670752499,"package_name":"simcore/services/comp/osparc_dex_service","ecosystem":"docker","requirements":"0.1.0","direct":true,"kind":"runtime","optional":false}]}],"score":null,"created_at":"2025-09-04T15:50:16.558Z","updated_at":"2025-11-04T15:50:43.601Z","avatar_url":"https://github.com/SPARC-FAIR-Codeathon.png","language":"R","category":null,"sub_category":null,"monthly_downloads":0,"funding_links":[],"readme_doi_urls":["https://doi.org/10.5281/zenodo.13308297","https://doi.org/10.1186/s13059-020-02096-y","https://doi.org/10.1073/pnas.0506580102"],"works":{},"citation_counts":{},"total_citations":0,"keywords_from_contributors":[],"project_url":"https://science.ecosyste.ms/api/v1/projects/5599","html_url":"https://science.ecosyste.ms/projects/5599","bibtex_url":"https://science.ecosyste.ms/projects/5599/export.bibtex","apalike_url":"https://science.ecosyste.ms/projects/5599/export.apalike"}