{"id":61296,"name":"ngsReports","description":null,"url":"https://github.com/smped/ngsreports","last_synced_at":"2025-09-08T12:28:44.472Z","repository":{"id":40249812,"uuid":"84133345","full_name":"smped/ngsReports","owner":"smped","description":null,"archived":false,"fork":false,"pushed_at":"2025-06-20T14:50:17.000Z","size":45801,"stargazers_count":23,"open_issues_count":3,"forks_count":4,"subscribers_count":7,"default_branch":"devel","last_synced_at":"2025-08-29T01:42:40.400Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":"https://smped.github.io/ngsReports/","language":"R","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":null,"status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/smped.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":null,"code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null}},"created_at":"2017-03-06T23:58:12.000Z","updated_at":"2025-08-11T17:23:00.000Z","dependencies_parsed_at":"2024-02-08T15:54:51.545Z","dependency_job_id":"52f86d1e-4ebc-40fe-b0af-5db9f78b5f13","html_url":"https://github.com/smped/ngsReports","commit_stats":{"total_commits":993,"total_committers":13,"mean_commits":76.38461538461539,"dds":0.527693856998993,"last_synced_commit":"af377639ab51dd58975f6992b9eb3c5fb8e8d0b1"},"previous_names":["steveped/ngsreports"],"tags_count":0,"template":false,"template_full_name":null,"purl":"pkg:github/smped/ngsReports","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/smped%2FngsReports","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/smped%2FngsReports/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/smped%2FngsReports/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/smped%2FngsReports/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/smped","download_url":"https://codeload.github.com/smped/ngsReports/tar.gz/refs/heads/devel","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/smped%2FngsReports/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":274184754,"owners_count":25237253,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-09-08T02:00:09.813Z","response_time":121,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"owner":{"login":"smped","name":"Stevie Pederson","uuid":"8252496","kind":"user","description":"","email":"","website":null,"location":"Adelaide, Australia","twitter":"stevie_ped","company":"Black Ochre Data Labs, Telethon Kids Institute","icon_url":"https://avatars.githubusercontent.com/u/8252496?v=4","repositories_count":1,"last_synced_at":"2023-04-28T17:47:12.905Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/smped","funding_links":[],"total_stars":null,"followers":null,"following":null,"created_at":"2022-11-09T00:54:40.123Z","updated_at":"2023-04-28T17:47:12.913Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/smped","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/smped/repositories"},"packages":[{"id":8420158,"name":"ngsReports","ecosystem":"bioconductor","description":"Load FastqQC reports and other NGS related files","homepage":"https://github.com/smped/ngsReports ","licenses":"LGPL-3","normalized_licenses":["LGPL-3.0"],"repository_url":"https://github.com/smped/ngsReports","keywords_array":["QualityControl","ReportWriting","Software"],"namespace":null,"versions_count":6,"first_release_published_at":"2023-10-12T14:48:58.463Z","latest_release_published_at":"2025-05-21T22:04:45.412Z","latest_release_number":"2.10.0","last_synced_at":"2025-08-28T21:20:18.847Z","created_at":"2023-10-12T14:48:58.173Z","updated_at":"2025-08-29T04:52:30.962Z","registry_url":"https://bioconductor.org/packages/ngsReports","install_command":null,"documentation_url":"https://bioconductor.org/packages/release/bioc/vignettes/ngsReports/inst/doc/ngsReports.pdf","metadata":{},"repo_metadata":{"id":40249812,"uuid":"84133345","full_name":"smped/ngsReports","owner":"smped","description":null,"archived":false,"fork":false,"pushed_at":"2025-06-20T14:50:17.000Z","size":45801,"stargazers_count":23,"open_issues_count":3,"forks_count":4,"subscribers_count":7,"default_branch":"devel","last_synced_at":"2025-08-29T01:42:40.400Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":"https://smped.github.io/ngsReports/","language":"R","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":null,"status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/smped.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":null,"code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null}},"created_at":"2017-03-06T23:58:12.000Z","updated_at":"2025-08-11T17:23:00.000Z","dependencies_parsed_at":"2024-02-08T15:54:51.545Z","dependency_job_id":"52f86d1e-4ebc-40fe-b0af-5db9f78b5f13","html_url":"https://github.com/smped/ngsReports","commit_stats":{"total_commits":993,"total_committers":13,"mean_commits":76.38461538461539,"dds":0.527693856998993,"last_synced_commit":"af377639ab51dd58975f6992b9eb3c5fb8e8d0b1"},"previous_names":["steveped/ngsreports"],"tags_count":0,"template":false,"template_full_name":null,"purl":"pkg:github/smped/ngsReports","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/smped%2FngsReports","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/smped%2FngsReports/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/smped%2FngsReports/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/smped%2FngsReports/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/smped","download_url":"https://codeload.github.com/smped/ngsReports/tar.gz/refs/heads/devel","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/smped%2FngsReports/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":272630965,"owners_count":24967104,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-08-29T02:00:10.610Z","response_time":87,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"},"owner_record":{"login":"smped","name":"Stevie Pederson","uuid":"8252496","kind":"user","description":"","email":"","website":null,"location":"Adelaide, Australia","twitter":"stevie_ped","company":"Black Ochre Data Labs, Telethon Kids Institute","icon_url":"https://avatars.githubusercontent.com/u/8252496?v=4","repositories_count":1,"last_synced_at":"2023-04-28T17:47:12.905Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/smped","funding_links":[],"total_stars":null,"followers":null,"following":null,"created_at":"2022-11-09T00:54:40.123Z","updated_at":"2023-04-28T17:47:12.913Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/smped","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/smped/repositories"},"tags":[]},"repo_metadata_updated_at":"2025-08-29T04:52:30.962Z","dependent_packages_count":0,"downloads":12902,"downloads_period":"total","dependent_repos_count":0,"rankings":{"downloads":63.27354260089686,"dependent_repos_count":0.0,"dependent_packages_count":0.0,"stargazers_count":5.343511450381679,"forks_count":5.084745762711865,"docker_downloads_count":null,"average":14.740359962798081},"purl":"pkg:bioconductor/ngsReports","advisories":[],"docker_usage_url":"https://docker.ecosyste.ms/usage/bioconductor/ngsReports","docker_dependents_count":null,"docker_downloads_count":null,"usage_url":"https://repos.ecosyste.ms/usage/bioconductor/ngsReports","dependent_repositories_url":"https://repos.ecosyste.ms/api/v1/usage/bioconductor/ngsReports/dependencies","status":null,"funding_links":[],"critical":null,"issue_metadata":{"last_synced_at":"2025-08-28T21:40:40.136Z","issues_count":40,"pull_requests_count":5,"avg_time_to_close_issue":5925890.702702703,"avg_time_to_close_pull_request":5611431.8,"issues_closed_count":37,"pull_requests_closed_count":5,"pull_request_authors_count":3,"issue_authors_count":15,"avg_comments_per_issue":1.95,"avg_comments_per_pull_request":1.2,"merged_pull_requests_count":2,"bot_issues_count":0,"bot_pull_requests_count":0,"past_year_issues_count":1,"past_year_pull_requests_count":0,"past_year_avg_time_to_close_issue":545131.0,"past_year_avg_time_to_close_pull_request":null,"past_year_issues_closed_count":1,"past_year_pull_requests_closed_count":0,"past_year_pull_request_authors_count":0,"past_year_issue_authors_count":1,"past_year_avg_comments_per_issue":1.0,"past_year_avg_comments_per_pull_request":null,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":0,"issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/smped%2FngsReports/issues","maintainers":[{"login":"smped","count":25,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/smped"}],"active_maintainers":[]},"versions_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/packages/ngsReports/versions","version_numbers_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/packages/ngsReports/version_numbers","dependent_packages_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/packages/ngsReports/dependent_packages","related_packages_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/packages/ngsReports/related_packages","maintainers":[{"uuid":"stephen.pederson.au@gmail.com","login":null,"name":"Stevie Pederson","email":"stephen.pederson.au@gmail.com","url":null,"packages_count":4,"html_url":null,"role":null,"created_at":"2023-11-26T17:15:50.126Z","updated_at":"2023-11-26T17:15:50.126Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/maintainers/stephen.pederson.au@gmail.com/packages"}],"registry":{"name":"bioconductor.org","url":"https://bioconductor.org","ecosystem":"bioconductor","default":true,"packages_count":2505,"maintainers_count":3164,"namespaces_count":0,"keywords_count":1086,"github":"Bioconductor","metadata":{"funded_packages_count":3},"icon_url":"https://github.com/Bioconductor.png","created_at":"2023-10-12T14:09:56.428Z","updated_at":"2025-09-08T06:51:28.460Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/packages","maintainers_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/maintainers","namespaces_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/namespaces"}}],"commits":{"id":1403049,"full_name":"smped/ngsReports","default_branch":"devel","committers":[{"name":"Steve Pederson","email":"stephen.pederson@adelaide.edu.au","login":null,"count":469},{"name":"steveped","email":"stephen.pederson.au@gmail.com","login":null,"count":157},{"name":"Chris","email":"a1632244@adelaide.edu.au","login":null,"count":142},{"name":"CMWbio","email":"christopher.ward@adelaide.edu.au","login":null,"count":114},{"name":"Steve Pederson","email":"steveped","login":"steveped","count":39},{"name":"Chris","email":"a1632244@student.adelaide.edu.au","login":null,"count":25},{"name":"Nitesh Turaga","email":"nitesh.turaga@gmail.com","login":null,"count":14},{"name":"Chris","email":"christopher.ward@student.adelaide.edu.au","login":null,"count":13},{"name":"CMWbio","email":"a1632244@student.Adelaide.edu.au","login":null,"count":8},{"name":"tothuhien","email":"tothuhien@gmail.com","login":null,"count":7},{"name":"J Wokaty","email":"jennifer.wokaty@sph.cuny.edu","login":null,"count":2},{"name":"J Wokaty","email":"jwokaty","login":"jwokaty","count":2},{"name":"Dan Kortschak","email":"dan.kortschak@adelaide.edu.au","login":null,"count":1}],"total_commits":993,"total_committers":13,"total_bot_commits":0,"total_bot_committers":0,"mean_commits":76.38461538461539,"dds":0.527693856998993,"past_year_committers":[{"name":"Stevie Ped","email":"stephen.pederson.au@gmail.com","login":null,"count":45},{"name":"Stevie Pederson","email":"steveped","login":"steveped","count":9},{"name":"J Wokaty","email":"jwokaty","login":"jwokaty","count":2},{"name":"J Wokaty","email":"jennifer.wokaty@sph.cuny.edu","login":null,"count":2}],"past_year_total_commits":58,"past_year_total_committers":4,"past_year_total_bot_commits":0,"past_year_total_bot_committers":0,"past_year_mean_commits":14.5,"past_year_dds":0.22413793103448276,"last_synced_at":"2023-10-25T13:05:00.599Z","last_synced_commit":"af377639ab51dd58975f6992b9eb3c5fb8e8d0b1","created_at":"2023-10-25T13:04:52.862Z","updated_at":"2023-10-25T13:05:00.600Z","commits_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories/smped%2FngsReports/commits","host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-08-28T00:00:20.468Z","repositories_count":5479765,"commits_count":853308191,"contributors_count":31095157,"owners_count":906558,"icon_url":"https://github.com/github.png","host_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories"}},"issues_stats":{"full_name":"smped/ngsReports","html_url":"https://github.com/smped/ngsReports","last_synced_at":"2025-08-28T21:40:40.136Z","status":"error","issues_count":40,"pull_requests_count":5,"avg_time_to_close_issue":5925890.702702703,"avg_time_to_close_pull_request":5611431.8,"issues_closed_count":37,"pull_requests_closed_count":5,"pull_request_authors_count":3,"issue_authors_count":15,"avg_comments_per_issue":1.95,"avg_comments_per_pull_request":1.2,"merged_pull_requests_count":2,"bot_issues_count":0,"bot_pull_requests_count":0,"past_year_issues_count":1,"past_year_pull_requests_count":0,"past_year_avg_time_to_close_issue":545131.0,"past_year_avg_time_to_close_pull_request":null,"past_year_issues_closed_count":1,"past_year_pull_requests_closed_count":0,"past_year_pull_request_authors_count":0,"past_year_issue_authors_count":1,"past_year_avg_comments_per_issue":1.0,"past_year_avg_comments_per_pull_request":null,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":0,"created_at":"2024-04-09T14:37:38.474Z","updated_at":"2025-09-01T23:45:17.371Z","repository_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/smped%2FngsReports","issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/smped%2FngsReports/issues","issue_labels_count":{"enhancement":1,"bug":1},"pull_request_labels_count":{},"issue_author_associations_count":{"OWNER":22,"NONE":16,"CONTRIBUTOR":1},"pull_request_author_associations_count":{"CONTRIBUTOR":3,"OWNER":2},"issue_authors":{"smped":22,"Rohit-Satyam":3,"edgardomortiz":2,"baerlachlan":1,"fabio-marcelo":1,"tothuhien":1,"lmanchon":1,"sa-lee":1,"legbar":1,"JulianSpagnuolo":1,"Teezi":1,"a-lud":1,"CharlotteSai":1,"scseekers":1,"LaureTomas":1},"pull_request_authors":{"smped":2,"kortschak":2,"CMWbio":1},"host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-03T00:00:08.273Z","repositories_count":10055219,"issues_count":30917502,"pull_requests_count":92945978,"authors_count":10627110,"icon_url":"https://github.com/github.png","host_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories","owners_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/owners","authors_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors"},"past_year_issue_labels_count":{},"past_year_pull_request_labels_count":{},"past_year_issue_author_associations_count":{},"past_year_pull_request_author_associations_count":{},"past_year_issue_authors":{},"past_year_pull_request_authors":{},"maintainers":[{"login":"smped","count":24,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/smped"}],"active_maintainers":[]},"events":{"total":{"WatchEvent":1,"PushEvent":4,"CreateEvent":2},"last_year":{"WatchEvent":1,"PushEvent":4,"CreateEvent":2}},"keywords":[],"dependencies":[{"ecosystem":"cran","filepath":"DESCRIPTION","sha":null,"kind":"manifest","created_at":"2022-06-30T14:54:48.326Z","updated_at":"2022-06-30T14:54:48.326Z","repository_link":"https://github.com/smped/ngsReports/blob/devel/DESCRIPTION","dependencies":[{"id":101359183,"package_name":"R","ecosystem":"cran","requirements":"\u003e= 4.1.0","direct":true,"kind":"depends","optional":false},{"id":101359184,"package_name":"BiocGenerics","ecosystem":"cran","requirements":"*","direct":true,"kind":"depends","optional":false},{"id":101359185,"package_name":"ggplot2","ecosystem":"cran","requirements":"\u003e= 3.3.5","direct":true,"kind":"depends","optional":false},{"id":101359186,"package_name":"tibble","ecosystem":"cran","requirements":"\u003e= 1.3.1","direct":true,"kind":"depends","optional":false},{"id":101359187,"package_name":"Biostrings","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":101359188,"package_name":"checkmate","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":101359189,"package_name":"dplyr","ecosystem":"cran","requirements":"\u003e= 1.0.0","direct":true,"kind":"imports","optional":false},{"id":101359190,"package_name":"DT","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":101359191,"package_name":"forcats","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":101359192,"package_name":"ggdendro","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":101359193,"package_name":"grDevices","ecosystem":"cran","requirements":"\u003e= 3.6.0","direct":true,"kind":"imports","optional":false},{"id":101359194,"package_name":"grid","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":101359195,"package_name":"lifecycle","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":101359196,"package_name":"lubridate","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":101359197,"package_name":"methods","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":101359198,"package_name":"pander","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":101359199,"package_name":"plotly","ecosystem":"cran","requirements":"\u003e= 4.9.4","direct":true,"kind":"imports","optional":false},{"id":101359200,"package_name":"readr","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":101359201,"package_name":"reshape2","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":101359202,"package_name":"rmarkdown","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":101359203,"package_name":"scales","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":101359204,"package_name":"stats","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":101359205,"package_name":"stringr","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":101359206,"package_name":"tidyr","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":101359207,"package_name":"tidyselect","ecosystem":"cran","requirements":"\u003e= 0.2.3","direct":true,"kind":"imports","optional":false},{"id":101359208,"package_name":"utils","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":101359209,"package_name":"zoo","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":101359210,"package_name":"BiocStyle","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":101359211,"package_name":"Cairo","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":101359212,"package_name":"knitr","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":101359213,"package_name":"testthat","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":101359214,"package_name":"truncnorm","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false}]},{"ecosystem":"actions","filepath":".github/workflows/check-bioc.yml","sha":null,"kind":"manifest","created_at":"2023-02-09T15:30:32.462Z","updated_at":"2023-02-09T15:30:32.462Z","repository_link":"https://github.com/smped/ngsReports/blob/devel/.github/workflows/check-bioc.yml","dependencies":[{"id":7496674492,"package_name":"actions/checkout","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":7496674493,"package_name":"r-lib/actions/setup-r","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":7496674494,"package_name":"r-lib/actions/setup-pandoc","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":7496674495,"package_name":"actions/cache","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":7496674496,"package_name":"actions/upload-artifact","ecosystem":"actions","requirements":"master","direct":true,"kind":"composite","optional":false}]}],"score":15.288261016934865,"created_at":"2025-09-08T10:44:25.140Z","updated_at":"2025-10-07T08:24:01.563Z","avatar_url":"https://github.com/smped.png","language":"R","category":null,"sub_category":null,"monthly_downloads":0,"funding_links":[],"readme_doi_urls":["https://doi.org/10.1093/bioinformatics/btz937"],"works":{},"citation_counts":{},"total_citations":0,"keywords_from_contributors":["bioconductor-package","gene","ontology","grna-sequence","immune-repertoire","random-effects","unwanted-variation","cnv","copy-number-variation","r-language"],"project_url":"https://science.ecosyste.ms/api/v1/projects/61296","html_url":"https://science.ecosyste.ms/projects/61296"}