{"id":61382,"name":"RAIDS","description":"Accurate and robust inference of genetic ancestry from cancer-derived molecular data across genomic platforms","url":"https://github.com/krasnitzlab/raids","last_synced_at":"2025-09-08T12:30:02.520Z","repository":{"id":50547963,"uuid":"478687408","full_name":"KrasnitzLab/RAIDS","owner":"KrasnitzLab","description":"Accurate and robust inference of genetic ancestry from cancer-derived molecular data across genomic platforms","archived":false,"fork":false,"pushed_at":"2025-05-13T00:59:13.000Z","size":9825,"stargazers_count":5,"open_issues_count":0,"forks_count":4,"subscribers_count":2,"default_branch":"main","last_synced_at":"2025-08-17T15:39:33.076Z","etag":null,"topics":["ancestry","cancer-genomics","exome-sequencing","genomics","inference","r-language","r-package","rna-seq","rna-sequencing","whole-genome-sequencing"],"latest_commit_sha":null,"homepage":"https://krasnitzlab.github.io/RAIDS/","language":"R","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"other","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/KrasnitzLab.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE.md","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null}},"created_at":"2022-04-06T18:47:59.000Z","updated_at":"2025-05-13T00:41:17.000Z","dependencies_parsed_at":"2024-08-17T02:41:24.798Z","dependency_job_id":"64e091f4-e21b-4871-9d7d-5ba35022ba64","html_url":"https://github.com/KrasnitzLab/RAIDS","commit_stats":null,"previous_names":[],"tags_count":10,"template":false,"template_full_name":null,"purl":"pkg:github/KrasnitzLab/RAIDS","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/KrasnitzLab%2FRAIDS","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/KrasnitzLab%2FRAIDS/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/KrasnitzLab%2FRAIDS/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/KrasnitzLab%2FRAIDS/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/KrasnitzLab","download_url":"https://codeload.github.com/KrasnitzLab/RAIDS/tar.gz/refs/heads/main","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/KrasnitzLab%2FRAIDS/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":274185023,"owners_count":25237297,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-09-08T02:00:09.813Z","response_time":121,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"owner":{"login":"KrasnitzLab","name":"KrasnitzLab","uuid":"26819334","kind":"organization","description":null,"email":null,"website":null,"location":null,"twitter":null,"company":null,"icon_url":"https://avatars.githubusercontent.com/u/26819334?v=4","repositories_count":5,"last_synced_at":"2023-03-09T23:00:39.785Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/KrasnitzLab","funding_links":[],"total_stars":null,"followers":null,"following":null,"created_at":"2022-11-19T14:07:34.428Z","updated_at":"2023-03-09T23:00:39.796Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/KrasnitzLab","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/KrasnitzLab/repositories"},"packages":[{"id":8489190,"name":"RAIDS","ecosystem":"bioconductor","description":"Robust Ancestry Inference using Data Synthesis","homepage":"https://krasnitzlab.github.io/RAIDS/ ","licenses":"Apache License (\u003e= 2)","normalized_licenses":["Apache-1.1"],"repository_url":"https://github.com/krasnitzlab/RAIDS","keywords_array":["BiocViews","DimensionReduction","GeneticVariability","Genetics","PrincipalComponent","Sequencing","Software","WholeGenome"],"namespace":null,"versions_count":4,"first_release_published_at":"2023-10-26T02:21:16.585Z","latest_release_published_at":"2025-05-01T22:24:16.740Z","latest_release_number":"1.6.1","last_synced_at":"2025-08-17T15:22:29.244Z","created_at":"2023-10-26T02:21:08.672Z","updated_at":"2025-08-17T15:37:31.078Z","registry_url":"https://bioconductor.org/packages/RAIDS","install_command":null,"documentation_url":"https://bioconductor.org/packages/release/bioc/vignettes/RAIDS/inst/doc/RAIDS.pdf","metadata":{},"repo_metadata":{"id":50547963,"uuid":"478687408","full_name":"KrasnitzLab/RAIDS","owner":"KrasnitzLab","description":"Accurate and robust inference of genetic ancestry from cancer-derived molecular data across genomic platforms","archived":false,"fork":false,"pushed_at":"2025-05-13T00:59:13.000Z","size":9825,"stargazers_count":5,"open_issues_count":0,"forks_count":4,"subscribers_count":2,"default_branch":"main","last_synced_at":"2025-07-13T16:53:56.872Z","etag":null,"topics":["ancestry","cancer-genomics","exome-sequencing","genomics","inference","r-language","r-package","rna-seq","rna-sequencing","whole-genome-sequencing"],"latest_commit_sha":null,"homepage":"https://krasnitzlab.github.io/RAIDS/","language":"R","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"other","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/KrasnitzLab.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE.md","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null}},"created_at":"2022-04-06T18:47:59.000Z","updated_at":"2025-05-13T00:41:17.000Z","dependencies_parsed_at":"2024-08-17T02:41:24.798Z","dependency_job_id":"64e091f4-e21b-4871-9d7d-5ba35022ba64","html_url":"https://github.com/KrasnitzLab/RAIDS","commit_stats":null,"previous_names":[],"tags_count":10,"template":false,"template_full_name":null,"purl":"pkg:github/KrasnitzLab/RAIDS","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/KrasnitzLab%2FRAIDS","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/KrasnitzLab%2FRAIDS/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/KrasnitzLab%2FRAIDS/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/KrasnitzLab%2FRAIDS/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/KrasnitzLab","download_url":"https://codeload.github.com/KrasnitzLab/RAIDS/tar.gz/refs/heads/main","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/KrasnitzLab%2FRAIDS/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":270869812,"owners_count":24659885,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-08-17T02:00:09.016Z","response_time":129,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"},"owner_record":{"login":"KrasnitzLab","name":"KrasnitzLab","uuid":"26819334","kind":"organization","description":null,"email":null,"website":null,"location":null,"twitter":null,"company":null,"icon_url":"https://avatars.githubusercontent.com/u/26819334?v=4","repositories_count":5,"last_synced_at":"2023-03-09T23:00:39.785Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/KrasnitzLab","funding_links":[],"total_stars":null,"followers":null,"following":null,"created_at":"2022-11-19T14:07:34.428Z","updated_at":"2023-03-09T23:00:39.796Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/KrasnitzLab","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/KrasnitzLab/repositories"},"tags":[{"name":"v1.7.1","sha":"ae2ec823e7cf9c8c1a5212e04f3cddc9cc120c46","kind":"commit","published_at":"2025-04-16T14:37:59.000Z","download_url":"https://codeload.github.com/KrasnitzLab/RAIDS/tar.gz/v1.7.1","html_url":"https://github.com/KrasnitzLab/RAIDS/releases/tag/v1.7.1","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/KrasnitzLab/RAIDS@v1.7.1","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/KrasnitzLab%2FRAIDS/tags/v1.7.1","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/KrasnitzLab%2FRAIDS/tags/v1.7.1/manifests"},{"name":"v0.99.15","sha":"eff286a947ccbf86ff9accd9961832718e9dd2ec","kind":"commit","published_at":"2023-10-13T04:15:38.000Z","download_url":"https://codeload.github.com/KrasnitzLab/RAIDS/tar.gz/v0.99.15","html_url":"https://github.com/KrasnitzLab/RAIDS/releases/tag/v0.99.15","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/KrasnitzLab/RAIDS@v0.99.15","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/KrasnitzLab%2FRAIDS/tags/v0.99.15","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/KrasnitzLab%2FRAIDS/tags/v0.99.15/manifests"},{"name":"v0.99.13","sha":"1749bf72813b3893af38d1c9fc19158b7b4b051e","kind":"commit","published_at":"2023-09-30T02:11:36.000Z","download_url":"https://codeload.github.com/KrasnitzLab/RAIDS/tar.gz/v0.99.13","html_url":"https://github.com/KrasnitzLab/RAIDS/releases/tag/v0.99.13","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/KrasnitzLab/RAIDS@v0.99.13","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/KrasnitzLab%2FRAIDS/tags/v0.99.13","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/KrasnitzLab%2FRAIDS/tags/v0.99.13/manifests"},{"name":"v0.99.12","sha":"9d634535abd978a6ec698565dc687aaac1e9278e","kind":"commit","published_at":"2023-09-29T22:14:06.000Z","download_url":"https://codeload.github.com/KrasnitzLab/RAIDS/tar.gz/v0.99.12","html_url":"https://github.com/KrasnitzLab/RAIDS/releases/tag/v0.99.12","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/KrasnitzLab/RAIDS@v0.99.12","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/KrasnitzLab%2FRAIDS/tags/v0.99.12","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/KrasnitzLab%2FRAIDS/tags/v0.99.12/manifests"},{"name":"v.0.99.11","sha":"ddb8a66b3276b8dddad6dda51b33f30b375d5a9f","kind":"commit","published_at":"2023-09-13T16:28:00.000Z","download_url":"https://codeload.github.com/KrasnitzLab/RAIDS/tar.gz/v.0.99.11","html_url":"https://github.com/KrasnitzLab/RAIDS/releases/tag/v.0.99.11","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/KrasnitzLab/RAIDS@v.0.99.11","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/KrasnitzLab%2FRAIDS/tags/v.0.99.11","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/KrasnitzLab%2FRAIDS/tags/v.0.99.11/manifests"},{"name":"v0.99.10","sha":"9596299011517eb9ae4233e8c80014aa74e5d7dc","kind":"commit","published_at":"2023-08-21T23:51:48.000Z","download_url":"https://codeload.github.com/KrasnitzLab/RAIDS/tar.gz/v0.99.10","html_url":"https://github.com/KrasnitzLab/RAIDS/releases/tag/v0.99.10","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/KrasnitzLab/RAIDS@v0.99.10","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/KrasnitzLab%2FRAIDS/tags/v0.99.10","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/KrasnitzLab%2FRAIDS/tags/v0.99.10/manifests"},{"name":"v0.99.8","sha":"52702e02652036b62ab33e972111d246126c5a0d","kind":"commit","published_at":"2023-08-20T22:45:42.000Z","download_url":"https://codeload.github.com/KrasnitzLab/RAIDS/tar.gz/v0.99.8","html_url":"https://github.com/KrasnitzLab/RAIDS/releases/tag/v0.99.8","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/KrasnitzLab/RAIDS@v0.99.8","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/KrasnitzLab%2FRAIDS/tags/v0.99.8","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/KrasnitzLab%2FRAIDS/tags/v0.99.8/manifests"},{"name":"v0.99.5","sha":"e21e7541c552046bd5d110a55e7f926e687f60e9","kind":"commit","published_at":"2023-06-08T17:44:37.000Z","download_url":"https://codeload.github.com/KrasnitzLab/RAIDS/tar.gz/v0.99.5","html_url":"https://github.com/KrasnitzLab/RAIDS/releases/tag/v0.99.5","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/KrasnitzLab/RAIDS@v0.99.5","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/KrasnitzLab%2FRAIDS/tags/v0.99.5","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/KrasnitzLab%2FRAIDS/tags/v0.99.5/manifests"},{"name":"v0.99.4","sha":"dc22bc6bfed6f889e936e650c509cc056d52acfb","kind":"commit","published_at":"2023-06-02T03:56:22.000Z","download_url":"https://codeload.github.com/KrasnitzLab/RAIDS/tar.gz/v0.99.4","html_url":"https://github.com/KrasnitzLab/RAIDS/releases/tag/v0.99.4","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/KrasnitzLab/RAIDS@v0.99.4","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/KrasnitzLab%2FRAIDS/tags/v0.99.4","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/KrasnitzLab%2FRAIDS/tags/v0.99.4/manifests"},{"name":"v0.99.0","sha":"ba86ac01d1e4211e6fc3363d5254fccb75f1f776","kind":"commit","published_at":"2023-03-30T03:40:25.000Z","download_url":"https://codeload.github.com/KrasnitzLab/RAIDS/tar.gz/v0.99.0","html_url":"https://github.com/KrasnitzLab/RAIDS/releases/tag/v0.99.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/KrasnitzLab/RAIDS@v0.99.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/KrasnitzLab%2FRAIDS/tags/v0.99.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/KrasnitzLab%2FRAIDS/tags/v0.99.0/manifests"}]},"repo_metadata_updated_at":"2025-08-17T15:37:31.078Z","dependent_packages_count":0,"downloads":4399,"downloads_period":"total","dependent_repos_count":0,"rankings":{"downloads":98.26011309264898,"dependent_repos_count":0.0,"dependent_packages_count":31.70943888647238,"stargazers_count":19.617224880382775,"forks_count":12.353197042192257,"docker_downloads_count":null,"average":32.38799478033928},"purl":"pkg:bioconductor/RAIDS","advisories":[],"docker_usage_url":"https://docker.ecosyste.ms/usage/bioconductor/RAIDS","docker_dependents_count":null,"docker_downloads_count":null,"usage_url":"https://repos.ecosyste.ms/usage/bioconductor/RAIDS","dependent_repositories_url":"https://repos.ecosyste.ms/api/v1/usage/bioconductor/RAIDS/dependencies","status":null,"funding_links":[],"critical":null,"issue_metadata":{"last_synced_at":"2025-06-10T05:04:57.276Z","issues_count":4,"pull_requests_count":162,"avg_time_to_close_issue":52604531.0,"avg_time_to_close_pull_request":4158.067901234568,"issues_closed_count":4,"pull_requests_closed_count":162,"pull_request_authors_count":2,"issue_authors_count":2,"avg_comments_per_issue":4.5,"avg_comments_per_pull_request":0.19753086419753085,"merged_pull_requests_count":159,"bot_issues_count":0,"bot_pull_requests_count":0,"past_year_issues_count":0,"past_year_pull_requests_count":63,"past_year_avg_time_to_close_issue":null,"past_year_avg_time_to_close_pull_request":4834.444444444444,"past_year_issues_closed_count":0,"past_year_pull_requests_closed_count":63,"past_year_pull_request_authors_count":2,"past_year_issue_authors_count":0,"past_year_avg_comments_per_issue":null,"past_year_avg_comments_per_pull_request":0.047619047619047616,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":60,"issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/KrasnitzLab%2FRAIDS/issues","maintainers":[{"login":"adeschen","count":136,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/adeschen"}],"active_maintainers":[{"login":"adeschen","count":45,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/adeschen"}]},"versions_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/packages/RAIDS/versions","version_numbers_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/packages/RAIDS/version_numbers","dependent_packages_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/packages/RAIDS/dependent_packages","related_packages_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/packages/RAIDS/related_packages","maintainers":[{"uuid":"pascal_belleau@hotmail.com","login":null,"name":"Pascal Belleau","email":"pascal_belleau@hotmail.com","url":null,"packages_count":2,"html_url":null,"role":null,"created_at":"2023-11-26T03:00:19.542Z","updated_at":"2023-11-26T03:00:19.542Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/maintainers/pascal_belleau@hotmail.com/packages"}],"registry":{"name":"bioconductor.org","url":"https://bioconductor.org","ecosystem":"bioconductor","default":true,"packages_count":2505,"maintainers_count":3164,"namespaces_count":0,"keywords_count":1086,"github":"Bioconductor","metadata":{"funded_packages_count":3},"icon_url":"https://github.com/Bioconductor.png","created_at":"2023-10-12T14:09:56.428Z","updated_at":"2025-09-08T06:51:28.460Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/packages","maintainers_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/maintainers","namespaces_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/namespaces"}}],"commits":{"id":9334340,"full_name":"krasnitzlab/raids","default_branch":"master","committers":null,"total_commits":null,"total_committers":null,"total_bot_commits":null,"total_bot_committers":null,"mean_commits":null,"dds":null,"past_year_committers":null,"past_year_total_commits":null,"past_year_total_committers":null,"past_year_total_bot_commits":null,"past_year_total_bot_committers":null,"past_year_mean_commits":null,"past_year_dds":null,"last_synced_at":null,"last_synced_commit":null,"created_at":"2025-03-26T03:17:40.801Z","updated_at":"2025-03-26T03:17:40.801Z","commits_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories/krasnitzlab%2Fraids/commits","host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-08T00:00:16.827Z","repositories_count":5483146,"commits_count":854228848,"contributors_count":31137076,"owners_count":908396,"icon_url":"https://github.com/github.png","host_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories"}},"issues_stats":{"full_name":"KrasnitzLab/RAIDS","html_url":"https://github.com/KrasnitzLab/RAIDS","last_synced_at":"2025-08-17T15:40:36.741Z","status":"error","issues_count":4,"pull_requests_count":162,"avg_time_to_close_issue":52604531.0,"avg_time_to_close_pull_request":4158.067901234568,"issues_closed_count":4,"pull_requests_closed_count":162,"pull_request_authors_count":2,"issue_authors_count":2,"avg_comments_per_issue":4.5,"avg_comments_per_pull_request":0.19753086419753085,"merged_pull_requests_count":159,"bot_issues_count":0,"bot_pull_requests_count":0,"past_year_issues_count":0,"past_year_pull_requests_count":63,"past_year_avg_time_to_close_issue":null,"past_year_avg_time_to_close_pull_request":4834.444444444444,"past_year_issues_closed_count":0,"past_year_pull_requests_closed_count":63,"past_year_pull_request_authors_count":2,"past_year_issue_authors_count":0,"past_year_avg_comments_per_issue":null,"past_year_avg_comments_per_pull_request":0.047619047619047616,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":60,"created_at":"2024-05-01T20:05:53.920Z","updated_at":"2025-09-02T14:06:04.243Z","repository_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/KrasnitzLab%2FRAIDS","issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/KrasnitzLab%2FRAIDS/issues","issue_labels_count":{"enhancement":2},"pull_request_labels_count":{},"issue_author_associations_count":{"MEMBER":2,"NONE":2,"CONTRIBUTOR":1},"pull_request_author_associations_count":{"MEMBER":175,"CONTRIBUTOR":42},"issue_authors":{"adeschen":2,"mdozmorov":2,"belleau":1},"pull_request_authors":{"adeschen":175,"belleau":42},"host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-03T00:00:08.273Z","repositories_count":10057061,"issues_count":30965349,"pull_requests_count":93487251,"authors_count":10684480,"icon_url":"https://github.com/github.png","host_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories","owners_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/owners","authors_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors"},"past_year_issue_labels_count":{},"past_year_pull_request_labels_count":{},"past_year_issue_author_associations_count":{"CONTRIBUTOR":1},"past_year_pull_request_author_associations_count":{"MEMBER":86,"CONTRIBUTOR":31},"past_year_issue_authors":{"belleau":1},"past_year_pull_request_authors":{"adeschen":86,"belleau":31},"maintainers":[{"login":"adeschen","count":177,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/adeschen"}],"active_maintainers":[{"login":"adeschen","count":86,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/adeschen"}]},"events":{"total":{"IssuesEvent":2,"IssueCommentEvent":4,"PushEvent":112,"PullRequestEvent":106,"CreateEvent":1},"last_year":{"IssuesEvent":2,"IssueCommentEvent":4,"PushEvent":112,"PullRequestEvent":106,"CreateEvent":1}},"keywords":["ancestry","cancer-genomics","exome-sequencing","genomics","inference","r-language","r-package","rna-seq","rna-sequencing","whole-genome-sequencing"],"dependencies":[{"ecosystem":"cran","filepath":"DESCRIPTION","sha":null,"kind":"manifest","created_at":"2022-08-13T04:30:20.715Z","updated_at":"2022-08-13T04:30:20.715Z","repository_link":"https://github.com/KrasnitzLab/RAIDS/blob/main/DESCRIPTION","dependencies":[{"id":1398585027,"package_name":"R","ecosystem":"cran","requirements":"\u003e= 4.0","direct":true,"kind":"depends","optional":false},{"id":1398585085,"package_name":"gdsfmt","ecosystem":"cran","requirements":"*","direct":true,"kind":"depends","optional":false},{"id":1398585087,"package_name":"SNPRelate","ecosystem":"cran","requirements":"*","direct":true,"kind":"depends","optional":false},{"id":1398585089,"package_name":"stats","ecosystem":"cran","requirements":"*","direct":true,"kind":"depends","optional":false},{"id":1398585091,"package_name":"utils","ecosystem":"cran","requirements":"*","direct":true,"kind":"depends","optional":false},{"id":1398585093,"package_name":"GENESIS","ecosystem":"cran","requirements":"*","direct":true,"kind":"depends","optional":false},{"id":1398585094,"package_name":"S4Vectors","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":1398585095,"package_name":"ensembldb","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":1398585096,"package_name":"EnsDb.Hsapiens.v86","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":1398585097,"package_name":"AnnotationDbi","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":1398585098,"package_name":"methods","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":1398585099,"package_name":"class","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":1398585100,"package_name":"pROC","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":1398585101,"package_name":"testthat","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":1398585102,"package_name":"knitr","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":1398585103,"package_name":"rmarkdown","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":1398585104,"package_name":"BiocStyle","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":1398585105,"package_name":"withr","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":1398585106,"package_name":"GenomicRanges","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false}]},{"ecosystem":"actions","filepath":".github/workflows/check-bioc.yaml","sha":null,"kind":"manifest","created_at":"2023-02-08T20:46:25.343Z","updated_at":"2023-02-08T20:46:25.343Z","repository_link":"https://github.com/KrasnitzLab/RAIDS/blob/main/.github/workflows/check-bioc.yaml","dependencies":[{"id":7467631082,"package_name":"actions/checkout","ecosystem":"actions","requirements":"v3","direct":true,"kind":"composite","optional":false},{"id":7467631083,"package_name":"r-lib/actions/setup-r","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":7467631084,"package_name":"r-lib/actions/setup-pandoc","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":7467631085,"package_name":"actions/cache","ecosystem":"actions","requirements":"v3","direct":true,"kind":"composite","optional":false},{"id":7467631086,"package_name":"actions/upload-artifact","ecosystem":"actions","requirements":"master","direct":true,"kind":"composite","optional":false}]},{"ecosystem":"actions","filepath":".github/workflows/test-coverage.yaml","sha":null,"kind":"manifest","created_at":"2023-02-08T20:46:25.466Z","updated_at":"2023-02-08T20:46:25.466Z","repository_link":"https://github.com/KrasnitzLab/RAIDS/blob/main/.github/workflows/test-coverage.yaml","dependencies":[{"id":7467631680,"package_name":"actions/checkout","ecosystem":"actions","requirements":"v3","direct":true,"kind":"composite","optional":false},{"id":7467631681,"package_name":"r-lib/actions/setup-r","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":7467631682,"package_name":"r-lib/actions/setup-r-dependencies","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false}]}],"score":null,"created_at":"2025-09-08T10:44:53.335Z","updated_at":"2025-10-07T08:24:03.235Z","avatar_url":"https://github.com/KrasnitzLab.png","language":"R","category":null,"sub_category":null,"monthly_downloads":0,"funding_links":[],"readme_doi_urls":["https://doi.org/10.1158/0008-5472.CAN-22-0682"],"works":{},"citation_counts":{},"total_citations":0,"keywords_from_contributors":[],"project_url":"https://science.ecosyste.ms/api/v1/projects/61382","html_url":"https://science.ecosyste.ms/projects/61382"}