{"id":61486,"name":"MIGSA","description":"Massive and Integrative Gene Set Analysis. MIGSA BioConductor package. GitHub version might be outdated.","url":"https://github.com/jcrodriguez1989/migsa","last_synced_at":"2025-09-08T12:31:29.561Z","repository":{"id":144177498,"uuid":"77692351","full_name":"jcrodriguez1989/MIGSA","owner":"jcrodriguez1989","description":"Massive and Integrative Gene Set Analysis. MIGSA BioConductor package. GitHub version might be outdated.","archived":false,"fork":false,"pushed_at":"2020-10-27T00:11:47.000Z","size":86204,"stargazers_count":0,"open_issues_count":0,"forks_count":1,"subscribers_count":2,"default_branch":"master","last_synced_at":"2025-08-06T08:48:34.893Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":"https://bioconductor.org/packages/MIGSA","language":"R","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":null,"status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/jcrodriguez1989.png","metadata":{"files":{"readme":null,"changelog":null,"contributing":null,"funding":null,"license":null,"code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null}},"created_at":"2016-12-30T14:54:28.000Z","updated_at":"2020-10-27T00:11:49.000Z","dependencies_parsed_at":null,"dependency_job_id":"f4d2c5b7-6410-49d1-9f1f-61c4ffe8984f","html_url":"https://github.com/jcrodriguez1989/MIGSA","commit_stats":null,"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"purl":"pkg:github/jcrodriguez1989/MIGSA","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/jcrodriguez1989%2FMIGSA","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/jcrodriguez1989%2FMIGSA/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/jcrodriguez1989%2FMIGSA/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/jcrodriguez1989%2FMIGSA/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/jcrodriguez1989","download_url":"https://codeload.github.com/jcrodriguez1989/MIGSA/tar.gz/refs/heads/master","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/jcrodriguez1989%2FMIGSA/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":274185355,"owners_count":25237379,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-09-08T02:00:09.813Z","response_time":121,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"owner":{"login":"jcrodriguez1989","name":"Juan C Rodriguez","uuid":"18466307","kind":"user","description":"PhD in Computer Science","email":"","website":"https://jcrodriguez.rbind.io/","location":"Cordoba, Argentina","twitter":"CancuCS","company":"FAMAF - UNC","icon_url":"https://avatars.githubusercontent.com/u/18466307?u=91596416389750624b2b5e6bfb0e36d4508c6155\u0026v=4","repositories_count":7,"last_synced_at":"2023-03-21T14:07:31.914Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/jcrodriguez1989","funding_links":[],"total_stars":null,"followers":null,"following":null,"created_at":"2023-03-21T14:07:31.954Z","updated_at":"2023-03-21T14:07:31.954Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/jcrodriguez1989","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/jcrodriguez1989/repositories"},"packages":[{"id":8419928,"name":"MIGSA","ecosystem":"bioconductor","description":"Massive and Integrative Gene Set Analysis","homepage":"https://github.com/jcrodriguez1989/MIGSA/ ","licenses":"GPL (\u003e= 2)","normalized_licenses":["CNRI-Python-GPL-Compatible"],"repository_url":"https://github.com/jcrodriguez1989/MIGSA","keywords_array":["GeneExpression","GeneSetEnrichment","KEGG","Microarray","RNASeq","Software","Visualization"],"namespace":null,"versions_count":1,"first_release_published_at":"2023-10-12T14:45:22.039Z","latest_release_published_at":"2023-10-12T14:45:22.039Z","latest_release_number":"1.24.0","last_synced_at":"2025-08-06T08:09:51.332Z","created_at":"2023-10-12T14:45:21.521Z","updated_at":"2025-08-06T08:09:51.332Z","registry_url":"https://bioconductor.org/packages/MIGSA","install_command":null,"documentation_url":"https://bioconductor.org/packages/release/bioc/vignettes/MIGSA/inst/doc/MIGSA.pdf","metadata":{},"repo_metadata":{"uuid":"77692351","full_name":"jcrodriguez1989/MIGSA","owner":"jcrodriguez1989","description":"Massive and Integrative Gene Set Analysis. MIGSA BioConductor package. GitHub version might be outdated.","archived":false,"fork":false,"pushed_at":"2020-10-27T00:11:47.000Z","size":86204,"stargazers_count":0,"open_issues_count":0,"forks_count":1,"subscribers_count":3,"default_branch":"master","last_synced_at":"2023-10-25T13:04:42.308Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":"https://bioconductor.org/packages/MIGSA","language":"R","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":null,"status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/jcrodriguez1989.png","metadata":{"files":{"readme":null,"changelog":null,"contributing":null,"funding":null,"license":null,"code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null}},"created_at":"2016-12-30T14:54:28.000Z","updated_at":"2020-10-27T00:11:49.000Z","dependencies_parsed_at":null,"dependency_job_id":"f4d2c5b7-6410-49d1-9f1f-61c4ffe8984f","html_url":"https://github.com/jcrodriguez1989/MIGSA","commit_stats":null,"previous_names":[],"tags_count":0,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/jcrodriguez1989%2FMIGSA","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/jcrodriguez1989%2FMIGSA/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/jcrodriguez1989%2FMIGSA/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/jcrodriguez1989%2FMIGSA/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/jcrodriguez1989","download_url":"https://codeload.github.com/jcrodriguez1989/MIGSA/tar.gz/refs/heads/master","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":167661767,"owners_count":9140170,"icon_url":"https://github.com/github.png","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"},"owner_record":{"login":"jcrodriguez1989","name":"Juan C Rodriguez","uuid":"18466307","kind":"user","description":"PhD in Computer Science","email":"","website":"https://jcrodriguez.rbind.io/","location":"Cordoba, Argentina","twitter":"CancuCS","company":"FAMAF - UNC","icon_url":"https://avatars.githubusercontent.com/u/18466307?u=91596416389750624b2b5e6bfb0e36d4508c6155\u0026v=4","repositories_count":7,"last_synced_at":"2023-03-21T14:07:31.914Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/jcrodriguez1989","created_at":"2023-03-21T14:07:31.954Z","updated_at":"2023-03-21T14:07:31.954Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/jcrodriguez1989","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/jcrodriguez1989/repositories"},"tags":[]},"repo_metadata_updated_at":"2023-10-25T13:08:17.271Z","dependent_packages_count":0,"downloads":7894,"downloads_period":"total","dependent_repos_count":0,"rankings":{"downloads":61.345158906134515,"dependent_repos_count":0.0,"dependent_packages_count":0.0,"stargazers_count":33.20610687022901,"forks_count":18.39080459770115,"docker_downloads_count":null,"average":22.588414074812935},"purl":"pkg:bioconductor/MIGSA","advisories":[],"docker_usage_url":"https://docker.ecosyste.ms/usage/bioconductor/MIGSA","docker_dependents_count":null,"docker_downloads_count":null,"usage_url":"https://repos.ecosyste.ms/usage/bioconductor/MIGSA","dependent_repositories_url":"https://repos.ecosyste.ms/api/v1/usage/bioconductor/MIGSA/dependencies","status":"removed","funding_links":[],"critical":null,"issue_metadata":null,"versions_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/packages/MIGSA/versions","version_numbers_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/packages/MIGSA/version_numbers","dependent_packages_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/packages/MIGSA/dependent_packages","related_packages_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/packages/MIGSA/related_packages","maintainers":[{"uuid":"jcrodriguez@unc.edu.ar ","login":null,"name":"Juan C. Rodriguez","email":"jcrodriguez@unc.edu.ar ","url":null,"packages_count":1,"html_url":null,"role":null,"created_at":"2023-10-12T14:48:16.099Z","updated_at":"2023-10-12T14:48:16.099Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/maintainers/jcrodriguez@unc.edu.ar%20/packages"}],"registry":{"name":"bioconductor.org","url":"https://bioconductor.org","ecosystem":"bioconductor","default":true,"packages_count":2505,"maintainers_count":3164,"namespaces_count":0,"keywords_count":1086,"github":"Bioconductor","metadata":{"funded_packages_count":3},"icon_url":"https://github.com/Bioconductor.png","created_at":"2023-10-12T14:09:56.428Z","updated_at":"2025-09-08T06:51:28.460Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/packages","maintainers_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/maintainers","namespaces_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/namespaces"}}],"commits":{"id":1403018,"full_name":"jcrodriguez1989/MIGSA","default_branch":"master","committers":[{"name":"Juan Cruz Rodriguez","email":"jcrodriguez@unc.edu.ar","login":"jcrodriguez1989","count":42},{"name":"Nitesh Turaga","email":"nitesh.turaga@gmail.com","login":"nturaga","count":6},{"name":"vobencha","email":"vobencha@gmail.com","login":"vobencha","count":2},{"name":"lshep","email":"lori.shepherd@roswellpark.org","login":"lshep","count":2},{"name":"Hervé Pagès","email":"hpages@fredhutch.org","login":"hpages","count":2},{"name":"LiNk-NY","email":"mramos09@gmail.com","login":"LiNk-NY","count":2},{"name":"vobencha","email":"valerie.obenchain@roswellpark.org","login":null,"count":2},{"name":"Herve Pages","email":"hpages@fhcrc.org","login":null,"count":2},{"name":"Martin Morgan","email":"mtmorgan@fhcrc.org","login":null,"count":1}],"total_commits":61,"total_committers":9,"total_bot_commits":0,"total_bot_committers":0,"mean_commits":6.777777777777778,"dds":0.3114754098360656,"past_year_committers":[],"past_year_total_commits":0,"past_year_total_committers":0,"past_year_total_bot_commits":0,"past_year_total_bot_committers":0,"past_year_mean_commits":0.0,"past_year_dds":0.0,"last_synced_at":"2025-08-06T08:10:02.004Z","last_synced_commit":"cb494f6af7625a8b08673a7662e14bcc63e594fa","created_at":"2023-10-25T13:04:39.825Z","updated_at":"2025-08-06T08:10:02.012Z","commits_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories/jcrodriguez1989%2FMIGSA/commits","host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-08T00:00:16.827Z","repositories_count":5483146,"commits_count":854228848,"contributors_count":31137076,"owners_count":908396,"icon_url":"https://github.com/github.png","host_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories"}},"issues_stats":{"full_name":"jcrodriguez1989/migsa","html_url":"https://github.com/jcrodriguez1989/migsa","last_synced_at":"2025-08-06T18:40:32.615Z","status":"error","issues_count":3,"pull_requests_count":0,"avg_time_to_close_issue":765408.6666666666,"avg_time_to_close_pull_request":null,"issues_closed_count":3,"pull_requests_closed_count":0,"pull_request_authors_count":0,"issue_authors_count":1,"avg_comments_per_issue":1.0,"avg_comments_per_pull_request":null,"merged_pull_requests_count":0,"bot_issues_count":0,"bot_pull_requests_count":0,"past_year_issues_count":0,"past_year_pull_requests_count":0,"past_year_avg_time_to_close_issue":null,"past_year_avg_time_to_close_pull_request":null,"past_year_issues_closed_count":0,"past_year_pull_requests_closed_count":0,"past_year_pull_request_authors_count":0,"past_year_issue_authors_count":0,"past_year_avg_comments_per_issue":null,"past_year_avg_comments_per_pull_request":null,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":0,"created_at":"2024-10-11T04:46:58.707Z","updated_at":"2025-08-06T18:40:32.615Z","repository_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/jcrodriguez1989%2Fmigsa","issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/jcrodriguez1989%2Fmigsa/issues","issue_labels_count":{},"pull_request_labels_count":{},"issue_author_associations_count":{"NONE":3},"pull_request_author_associations_count":{},"issue_authors":{"HenrikBengtsson":3},"pull_request_authors":{},"host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-03T00:00:08.273Z","repositories_count":10060029,"issues_count":31035129,"pull_requests_count":93957968,"authors_count":10685658,"icon_url":"https://github.com/github.png","host_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories","owners_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/owners","authors_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors"},"past_year_issue_labels_count":{},"past_year_pull_request_labels_count":{},"past_year_issue_author_associations_count":{},"past_year_pull_request_author_associations_count":{},"past_year_issue_authors":{},"past_year_pull_request_authors":{},"maintainers":[],"active_maintainers":[]},"events":{"total":{},"last_year":{}},"keywords":[],"dependencies":[],"score":null,"created_at":"2025-09-08T10:45:07.847Z","updated_at":"2025-10-07T08:24:05.959Z","avatar_url":"https://github.com/jcrodriguez1989.png","language":"R","category":null,"sub_category":null,"monthly_downloads":0,"funding_links":[],"readme_doi_urls":[],"works":{},"citation_counts":{},"total_citations":0,"keywords_from_contributors":["bioconductor-packages","genomics","gene","copy-number","u24ca289073","loh","tumor-heterogeneity","tumor-mutational-burden","tumor-purity","tcga"],"project_url":"https://science.ecosyste.ms/api/v1/projects/61486","html_url":"https://science.ecosyste.ms/projects/61486"}