{"id":61532,"name":"baySeq","description":null,"url":"https://github.com/samgg/bayseq","last_synced_at":"2025-09-08T12:31:50.682Z","repository":{"id":239124355,"uuid":"782098687","full_name":"SamGG/baySeq","owner":"SamGG","description":null,"archived":false,"fork":false,"pushed_at":"2024-04-13T14:24:46.000Z","size":1153,"stargazers_count":0,"open_issues_count":0,"forks_count":0,"subscribers_count":1,"default_branch":"devel","last_synced_at":"2025-08-07T20:24:02.349Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":null,"language":"R","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":null,"status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/SamGG.png","metadata":{"files":{"readme":null,"changelog":null,"contributing":null,"funding":null,"license":null,"code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2024-04-04T16:25:58.000Z","updated_at":"2024-04-04T16:36:20.000Z","dependencies_parsed_at":null,"dependency_job_id":"06d7ad13-3e36-4738-9beb-075e80122155","html_url":"https://github.com/SamGG/baySeq","commit_stats":null,"previous_names":["samgg/bayseq"],"tags_count":0,"template":false,"template_full_name":null,"purl":"pkg:github/SamGG/baySeq","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/SamGG%2FbaySeq","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/SamGG%2FbaySeq/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/SamGG%2FbaySeq/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/SamGG%2FbaySeq/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/SamGG","download_url":"https://codeload.github.com/SamGG/baySeq/tar.gz/refs/heads/devel","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/SamGG%2FbaySeq/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":274185533,"owners_count":25237414,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-09-08T02:00:09.813Z","response_time":121,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"owner":{"login":"SamGG","name":"Samuel Granjeaud","uuid":"3333348","kind":"user","description":"first dot last at inserm dot fr","email":"","website":null,"location":"Marseille, France","twitter":null,"company":"Inserm - CRCM","icon_url":"https://avatars.githubusercontent.com/u/3333348?u=727af103e6d86a678b9001853f51b023de88aeab\u0026v=4","repositories_count":59,"last_synced_at":"2023-08-03T09:12:48.676Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/SamGG","funding_links":[],"total_stars":null,"followers":null,"following":null,"created_at":"2022-11-06T00:35:14.458Z","updated_at":"2023-08-03T09:12:48.823Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/SamGG","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/SamGG/repositories"},"packages":[{"id":8418744,"name":"baySeq","ecosystem":"bioconductor","description":"Empirical Bayesian analysis of patterns of differential expression in count data","homepage":"https://github.com/samgg/baySeq ","licenses":"GPL-3","normalized_licenses":["GPL-3.0"],"repository_url":"https://github.com/samgg/baySeq","keywords_array":["Bayesian","Coverage","DifferentialExpression","MultipleComparison","SAGE","Sequencing","Software"],"namespace":null,"versions_count":5,"first_release_published_at":"2023-10-12T14:12:55.470Z","latest_release_published_at":"2025-05-05T05:17:49.978Z","latest_release_number":"2.42.0","last_synced_at":"2025-08-07T20:07:13.800Z","created_at":"2023-10-12T14:12:55.439Z","updated_at":"2025-08-07T20:10:28.508Z","registry_url":"https://bioconductor.org/packages/baySeq","install_command":null,"documentation_url":"https://bioconductor.org/packages/release/bioc/vignettes/baySeq/inst/doc/baySeq.pdf","metadata":{},"repo_metadata":{"id":239124355,"uuid":"782098687","full_name":"SamGG/baySeq","owner":"SamGG","description":null,"archived":false,"fork":false,"pushed_at":"2024-04-13T14:24:46.000Z","size":1153,"stargazers_count":0,"open_issues_count":0,"forks_count":0,"subscribers_count":1,"default_branch":"devel","last_synced_at":"2025-07-06T07:47:54.658Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":null,"language":"R","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":null,"status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/SamGG.png","metadata":{"files":{"readme":null,"changelog":null,"contributing":null,"funding":null,"license":null,"code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2024-04-04T16:25:58.000Z","updated_at":"2024-04-04T16:36:20.000Z","dependencies_parsed_at":null,"dependency_job_id":"06d7ad13-3e36-4738-9beb-075e80122155","html_url":"https://github.com/SamGG/baySeq","commit_stats":null,"previous_names":["samgg/bayseq"],"tags_count":0,"template":false,"template_full_name":null,"purl":"pkg:github/SamGG/baySeq","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/SamGG%2FbaySeq","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/SamGG%2FbaySeq/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/SamGG%2FbaySeq/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/SamGG%2FbaySeq/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/SamGG","download_url":"https://codeload.github.com/SamGG/baySeq/tar.gz/refs/heads/devel","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/SamGG%2FbaySeq/sbom","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":269317236,"owners_count":24396846,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-08-07T02:00:09.698Z","response_time":73,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"},"owner_record":{"login":"SamGG","name":"Samuel Granjeaud","uuid":"3333348","kind":"user","description":"first dot last at inserm dot fr","email":"","website":null,"location":"Marseille, France","twitter":null,"company":"Inserm - CRCM","icon_url":"https://avatars.githubusercontent.com/u/3333348?u=727af103e6d86a678b9001853f51b023de88aeab\u0026v=4","repositories_count":59,"last_synced_at":"2023-08-03T09:12:48.676Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/SamGG","funding_links":[],"total_stars":null,"followers":null,"following":null,"created_at":"2022-11-06T00:35:14.458Z","updated_at":"2023-08-03T09:12:48.823Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/SamGG","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/SamGG/repositories"},"tags":[]},"repo_metadata_updated_at":"2025-08-07T20:10:28.508Z","dependent_packages_count":6,"downloads":137591,"downloads_period":"total","dependent_repos_count":0,"rankings":{"downloads":11.428571428571429,"dependent_repos_count":0.0,"dependent_packages_count":0.0,"stargazers_count":null,"forks_count":null,"docker_downloads_count":null,"average":3.8095238095238098},"purl":"pkg:bioconductor/baySeq","advisories":[],"docker_usage_url":"https://docker.ecosyste.ms/usage/bioconductor/baySeq","docker_dependents_count":null,"docker_downloads_count":null,"usage_url":"https://repos.ecosyste.ms/usage/bioconductor/baySeq","dependent_repositories_url":"https://repos.ecosyste.ms/api/v1/usage/bioconductor/baySeq/dependencies","status":null,"funding_links":[],"critical":null,"issue_metadata":{"last_synced_at":"2025-07-06T07:48:50.784Z","issues_count":0,"pull_requests_count":0,"avg_time_to_close_issue":null,"avg_time_to_close_pull_request":null,"issues_closed_count":0,"pull_requests_closed_count":0,"pull_request_authors_count":0,"issue_authors_count":0,"avg_comments_per_issue":null,"avg_comments_per_pull_request":null,"merged_pull_requests_count":0,"bot_issues_count":0,"bot_pull_requests_count":0,"past_year_issues_count":0,"past_year_pull_requests_count":0,"past_year_avg_time_to_close_issue":null,"past_year_avg_time_to_close_pull_request":null,"past_year_issues_closed_count":0,"past_year_pull_requests_closed_count":0,"past_year_pull_request_authors_count":0,"past_year_issue_authors_count":0,"past_year_avg_comments_per_issue":null,"past_year_avg_comments_per_pull_request":null,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":0,"issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/samgg%2FbaySeq/issues","maintainers":[],"active_maintainers":[]},"versions_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/packages/baySeq/versions","version_numbers_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/packages/baySeq/version_numbers","dependent_packages_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/packages/baySeq/dependent_packages","related_packages_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/packages/baySeq/related_packages","maintainers":[{"uuid":"samuel.granjeaud@inserm.fr","login":null,"name":"Samuel Granjeaud","email":"samuel.granjeaud@inserm.fr","url":null,"packages_count":3,"html_url":null,"role":null,"created_at":"2024-05-10T07:02:54.776Z","updated_at":"2024-05-10T07:02:54.776Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/maintainers/samuel.granjeaud@inserm.fr/packages"}],"registry":{"name":"bioconductor.org","url":"https://bioconductor.org","ecosystem":"bioconductor","default":true,"packages_count":2505,"maintainers_count":3164,"namespaces_count":0,"keywords_count":1086,"github":"Bioconductor","metadata":{"funded_packages_count":3},"icon_url":"https://github.com/Bioconductor.png","created_at":"2023-10-12T14:09:56.428Z","updated_at":"2025-09-08T06:51:28.460Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/packages","maintainers_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/maintainers","namespaces_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/namespaces"}}],"commits":{"message":"Repository syncing started."},"issues_stats":{"full_name":"samgg/baySeq","html_url":"https://github.com/samgg/baySeq","last_synced_at":"2025-08-08T08:57:27.717Z","status":"error","issues_count":0,"pull_requests_count":0,"avg_time_to_close_issue":null,"avg_time_to_close_pull_request":null,"issues_closed_count":0,"pull_requests_closed_count":0,"pull_request_authors_count":0,"issue_authors_count":0,"avg_comments_per_issue":null,"avg_comments_per_pull_request":null,"merged_pull_requests_count":0,"bot_issues_count":0,"bot_pull_requests_count":0,"past_year_issues_count":0,"past_year_pull_requests_count":0,"past_year_avg_time_to_close_issue":null,"past_year_avg_time_to_close_pull_request":null,"past_year_issues_closed_count":0,"past_year_pull_requests_closed_count":0,"past_year_pull_request_authors_count":0,"past_year_issue_authors_count":0,"past_year_avg_comments_per_issue":null,"past_year_avg_comments_per_pull_request":null,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":0,"created_at":"2024-06-19T00:09:52.216Z","updated_at":"2025-08-08T08:57:27.717Z","repository_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/samgg%2FbaySeq","issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/samgg%2FbaySeq/issues","issue_labels_count":{},"pull_request_labels_count":{},"issue_author_associations_count":{},"pull_request_author_associations_count":{},"issue_authors":{},"pull_request_authors":{},"host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-08T00:00:17.013Z","repositories_count":10165784,"issues_count":31999265,"pull_requests_count":100269215,"authors_count":10729006,"icon_url":"https://github.com/github.png","host_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories","owners_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/owners","authors_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors"},"past_year_issue_labels_count":{},"past_year_pull_request_labels_count":{},"past_year_issue_author_associations_count":{},"past_year_pull_request_author_associations_count":{},"past_year_issue_authors":{},"past_year_pull_request_authors":{},"maintainers":[],"active_maintainers":[]},"events":{"total":{},"last_year":{}},"keywords":[],"dependencies":[],"score":null,"created_at":"2025-09-08T10:45:20.256Z","updated_at":"2025-10-07T08:24:06.849Z","avatar_url":"https://github.com/SamGG.png","language":"R","category":null,"sub_category":null,"monthly_downloads":0,"funding_links":[],"readme_doi_urls":[],"works":{},"citation_counts":{},"total_citations":0,"keywords_from_contributors":[],"project_url":"https://science.ecosyste.ms/api/v1/projects/61532","html_url":"https://science.ecosyste.ms/projects/61532"}