{"id":61691,"name":"crisprDesign","description":"Comprehensive design of CRISPR gRNAs for nucleases and base editors","url":"https://github.com/crisprverse/crisprdesign","last_synced_at":"2025-09-08T10:49:08.555Z","repository":{"id":56777276,"uuid":"523800050","full_name":"crisprVerse/crisprDesign","owner":"crisprVerse","description":"Comprehensive design of CRISPR gRNAs for nucleases and base editors","archived":false,"fork":false,"pushed_at":"2025-03-05T18:46:42.000Z","size":6213,"stargazers_count":23,"open_issues_count":10,"forks_count":5,"subscribers_count":2,"default_branch":"devel","last_synced_at":"2025-08-23T06:55:54.511Z","etag":null,"topics":["bioconductor","bioconductor-package","crispr","crispr-cas9","crispr-design","crispr-target","genomics-analysis","grna","grna-sequence","grna-sequences","sgrna","sgrna-design"],"latest_commit_sha":null,"homepage":"","language":"R","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"mit","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/crisprVerse.png","metadata":{"files":{"readme":"README.Rmd","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2022-08-11T16:48:52.000Z","updated_at":"2025-06-14T01:50:01.000Z","dependencies_parsed_at":"2024-01-13T03:46:30.110Z","dependency_job_id":"a14394e9-1421-4ecb-be12-5a3b124c6e9a","html_url":"https://github.com/crisprVerse/crisprDesign","commit_stats":{"total_commits":350,"total_committers":6,"mean_commits":"58.333333333333336","dds":0.4314285714285714,"last_synced_commit":"98724dbafe87863723bf829f9300cafa5852c130"},"previous_names":[],"tags_count":2,"template":false,"template_full_name":null,"purl":"pkg:github/crisprVerse/crisprDesign","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/crisprVerse%2FcrisprDesign","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/crisprVerse%2FcrisprDesign/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/crisprVerse%2FcrisprDesign/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/crisprVerse%2FcrisprDesign/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/crisprVerse","download_url":"https://codeload.github.com/crisprVerse/crisprDesign/tar.gz/refs/heads/devel","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/crisprVerse%2FcrisprDesign/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":274173635,"owners_count":25235198,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-09-08T02:00:09.813Z","response_time":121,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"owner":{"login":"crisprVerse","name":"crisprVerse","uuid":"108375357","kind":"organization","description":"Bioconductor ecosystem for CRISPR gRNA design","email":"fortin946@gmail.com","website":null,"location":null,"twitter":null,"company":null,"icon_url":"https://avatars.githubusercontent.com/u/108375357?v=4","repositories_count":4,"last_synced_at":"2023-03-10T18:01:15.155Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/crisprVerse","funding_links":[],"total_stars":null,"followers":null,"following":null,"created_at":"2023-02-14T20:21:31.820Z","updated_at":"2023-03-10T18:01:15.193Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/crisprVerse","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/crisprVerse/repositories"},"packages":[{"id":8419127,"name":"crisprDesign","ecosystem":"bioconductor","description":"Comprehensive design of CRISPR gRNAs for nucleases and base editors","homepage":"https://github.com/crisprVerse/crisprDesign ","licenses":"MIT + file LICENSE","normalized_licenses":["MIT"],"repository_url":"https://github.com/crisprVerse/crisprDesign","keywords_array":["CRISPR","FunctionalGenomics","GeneTarget","Software"],"namespace":null,"versions_count":5,"first_release_published_at":"2023-10-12T14:27:32.262Z","latest_release_published_at":"2025-05-10T05:02:59.089Z","latest_release_number":"1.10.0","last_synced_at":"2025-08-23T00:33:57.247Z","created_at":"2023-10-12T14:27:31.940Z","updated_at":"2025-08-23T06:55:59.129Z","registry_url":"https://bioconductor.org/packages/crisprDesign","install_command":null,"documentation_url":"https://bioconductor.org/packages/release/bioc/vignettes/crisprDesign/inst/doc/crisprDesign.pdf","metadata":{},"repo_metadata":{"id":56777276,"uuid":"523800050","full_name":"crisprVerse/crisprDesign","owner":"crisprVerse","description":"Comprehensive design of CRISPR gRNAs for nucleases and base editors","archived":false,"fork":false,"pushed_at":"2025-03-05T18:46:42.000Z","size":6213,"stargazers_count":23,"open_issues_count":10,"forks_count":5,"subscribers_count":2,"default_branch":"devel","last_synced_at":"2025-07-17T03:08:20.153Z","etag":null,"topics":["bioconductor","bioconductor-package","crispr","crispr-cas9","crispr-design","crispr-target","genomics-analysis","grna","grna-sequence","grna-sequences","sgrna","sgrna-design"],"latest_commit_sha":null,"homepage":"","language":"R","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"mit","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/crisprVerse.png","metadata":{"files":{"readme":"README.Rmd","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2022-08-11T16:48:52.000Z","updated_at":"2025-06-14T01:50:01.000Z","dependencies_parsed_at":"2024-01-13T03:46:30.110Z","dependency_job_id":"a14394e9-1421-4ecb-be12-5a3b124c6e9a","html_url":"https://github.com/crisprVerse/crisprDesign","commit_stats":{"total_commits":350,"total_committers":6,"mean_commits":"58.333333333333336","dds":0.4314285714285714,"last_synced_commit":"98724dbafe87863723bf829f9300cafa5852c130"},"previous_names":[],"tags_count":2,"template":false,"template_full_name":null,"purl":"pkg:github/crisprVerse/crisprDesign","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/crisprVerse%2FcrisprDesign","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/crisprVerse%2FcrisprDesign/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/crisprVerse%2FcrisprDesign/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/crisprVerse%2FcrisprDesign/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/crisprVerse","download_url":"https://codeload.github.com/crisprVerse/crisprDesign/tar.gz/refs/heads/devel","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/crisprVerse%2FcrisprDesign/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":271745745,"owners_count":24813525,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-08-23T02:00:09.327Z","response_time":69,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"},"owner_record":{"login":"crisprVerse","name":"crisprVerse","uuid":"108375357","kind":"organization","description":"Bioconductor ecosystem for CRISPR gRNA design","email":"fortin946@gmail.com","website":null,"location":null,"twitter":null,"company":null,"icon_url":"https://avatars.githubusercontent.com/u/108375357?v=4","repositories_count":4,"last_synced_at":"2023-03-10T18:01:15.155Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/crisprVerse","funding_links":[],"total_stars":null,"followers":null,"following":null,"created_at":"2023-02-14T20:21:31.820Z","updated_at":"2023-03-10T18:01:15.193Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/crisprVerse","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/crisprVerse/repositories"},"tags":[{"name":"v0.99.178","sha":"60a0cf9d20294212e19ddfe6c931b97a430f33f6","kind":"commit","published_at":"2022-10-17T19:18:21.000Z","download_url":"https://codeload.github.com/crisprVerse/crisprDesign/tar.gz/v0.99.178","html_url":"https://github.com/crisprVerse/crisprDesign/releases/tag/v0.99.178","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/crisprVerse/crisprDesign@v0.99.178","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/crisprVerse%2FcrisprDesign/tags/v0.99.178","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/crisprVerse%2FcrisprDesign/tags/v0.99.178/manifests"},{"name":"v0.99.177","sha":"8dcbfd1e960e1c54a8babe87cde9ca9ed5fe312d","kind":"commit","published_at":"2022-10-15T16:25:21.000Z","download_url":"https://codeload.github.com/crisprVerse/crisprDesign/tar.gz/v0.99.177","html_url":"https://github.com/crisprVerse/crisprDesign/releases/tag/v0.99.177","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/crisprVerse/crisprDesign@v0.99.177","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/crisprVerse%2FcrisprDesign/tags/v0.99.177","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/crisprVerse%2FcrisprDesign/tags/v0.99.177/manifests"}]},"repo_metadata_updated_at":"2025-08-23T06:55:59.129Z","dependent_packages_count":3,"downloads":10152,"downloads_period":"total","dependent_repos_count":0,"rankings":{"downloads":88.27433628318585,"dependent_repos_count":0.0,"dependent_packages_count":0.0,"stargazers_count":null,"forks_count":null,"docker_downloads_count":null,"average":29.424778761061948},"purl":"pkg:bioconductor/crisprDesign","advisories":[],"docker_usage_url":"https://docker.ecosyste.ms/usage/bioconductor/crisprDesign","docker_dependents_count":null,"docker_downloads_count":null,"usage_url":"https://repos.ecosyste.ms/usage/bioconductor/crisprDesign","dependent_repositories_url":"https://repos.ecosyste.ms/api/v1/usage/bioconductor/crisprDesign/dependencies","status":null,"funding_links":[],"critical":null,"issue_metadata":{"last_synced_at":"2025-06-14T23:50:04.624Z","issues_count":34,"pull_requests_count":6,"avg_time_to_close_issue":1954203.125,"avg_time_to_close_pull_request":556628.8333333334,"issues_closed_count":24,"pull_requests_closed_count":6,"pull_request_authors_count":3,"issue_authors_count":17,"avg_comments_per_issue":1.7647058823529411,"avg_comments_per_pull_request":0.16666666666666666,"merged_pull_requests_count":6,"bot_issues_count":0,"bot_pull_requests_count":0,"past_year_issues_count":4,"past_year_pull_requests_count":0,"past_year_avg_time_to_close_issue":309245.0,"past_year_avg_time_to_close_pull_request":null,"past_year_issues_closed_count":2,"past_year_pull_requests_closed_count":0,"past_year_pull_request_authors_count":0,"past_year_issue_authors_count":4,"past_year_avg_comments_per_issue":0.5,"past_year_avg_comments_per_pull_request":null,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":0,"issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/crisprVerse%2FcrisprDesign/issues","maintainers":[{"login":"Jfortin1","count":7,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/Jfortin1"},{"login":"ltHobbes","count":5,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/ltHobbes"}],"active_maintainers":[]},"versions_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/packages/crisprDesign/versions","version_numbers_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/packages/crisprDesign/version_numbers","dependent_packages_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/packages/crisprDesign/dependent_packages","related_packages_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/packages/crisprDesign/related_packages","maintainers":[{"uuid":"fortin946@gmail.com","login":null,"name":"Jean-Philippe Fortin","email":"fortin946@gmail.com","url":null,"packages_count":10,"html_url":null,"role":null,"created_at":"2023-11-25T14:03:51.395Z","updated_at":"2023-11-25T14:03:51.395Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/maintainers/fortin946@gmail.com/packages"}],"registry":{"name":"bioconductor.org","url":"https://bioconductor.org","ecosystem":"bioconductor","default":true,"packages_count":2505,"maintainers_count":3164,"namespaces_count":0,"keywords_count":1086,"github":"Bioconductor","metadata":{"funded_packages_count":3},"icon_url":"https://github.com/Bioconductor.png","created_at":"2023-10-12T14:09:56.428Z","updated_at":"2025-09-08T06:51:28.460Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/packages","maintainers_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/maintainers","namespaces_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/namespaces"}}],"commits":{"id":1403154,"full_name":"crisprVerse/crisprDesign","default_branch":"master","committers":[{"name":"fortinj2","email":"fortin.jeanphilippe@gene.com","login":null,"count":199},{"name":"Jean-Philippe Fortin","email":"fortin946@gmail.com","login":null,"count":97},{"name":"Luke Hoberecht","email":"hoberecl@gene.com","login":null,"count":32},{"name":"Luke Hoberecht","email":"lukehob3@gmail.com","login":null,"count":18},{"name":"J Wokaty","email":"jennifer.wokaty@sph.cuny.edu","login":null,"count":2},{"name":"J Wokaty","email":"jwokaty","login":"jwokaty","count":2}],"total_commits":350,"total_committers":6,"total_bot_commits":0,"total_bot_committers":0,"mean_commits":58.333333333333336,"dds":0.4314285714285714,"past_year_committers":[{"name":"Jean-Philippe Fortin","email":"fortin946@gmail.com","login":null,"count":19},{"name":"Luke Hoberecht","email":"lukehob3@gmail.com","login":null,"count":18},{"name":"J Wokaty","email":"jennifer.wokaty@sph.cuny.edu","login":null,"count":2},{"name":"J Wokaty","email":"jwokaty","login":"jwokaty","count":2}],"past_year_total_commits":41,"past_year_total_committers":4,"past_year_total_bot_commits":0,"past_year_total_bot_committers":0,"past_year_mean_commits":10.25,"past_year_dds":0.5365853658536586,"last_synced_at":"2023-10-25T13:15:43.572Z","last_synced_commit":"98724dbafe87863723bf829f9300cafa5852c130","created_at":"2023-10-25T13:15:40.416Z","updated_at":"2023-10-25T13:15:43.572Z","commits_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories/crisprVerse%2FcrisprDesign/commits","host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-08T00:00:16.827Z","repositories_count":5481641,"commits_count":853635064,"contributors_count":31099484,"owners_count":907162,"icon_url":"https://github.com/github.png","host_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories"}},"issues_stats":{"full_name":"crisprVerse/crisprDesign","html_url":"https://github.com/crisprVerse/crisprDesign","last_synced_at":"2025-08-31T15:21:58.284Z","status":null,"issues_count":34,"pull_requests_count":6,"avg_time_to_close_issue":1954203.125,"avg_time_to_close_pull_request":556628.8333333334,"issues_closed_count":24,"pull_requests_closed_count":6,"pull_request_authors_count":3,"issue_authors_count":17,"avg_comments_per_issue":1.7647058823529411,"avg_comments_per_pull_request":0.16666666666666666,"merged_pull_requests_count":6,"bot_issues_count":0,"bot_pull_requests_count":0,"past_year_issues_count":4,"past_year_pull_requests_count":0,"past_year_avg_time_to_close_issue":309245.0,"past_year_avg_time_to_close_pull_request":null,"past_year_issues_closed_count":2,"past_year_pull_requests_closed_count":0,"past_year_pull_request_authors_count":0,"past_year_issue_authors_count":4,"past_year_avg_comments_per_issue":0.5,"past_year_avg_comments_per_pull_request":null,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":0,"created_at":"2024-05-01T20:04:22.239Z","updated_at":"2025-09-03T01:02:18.267Z","repository_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/crisprVerse%2FcrisprDesign","issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/crisprVerse%2FcrisprDesign/issues","issue_labels_count":{"bug":8,"enhancement":5,"low-priority":4,"question":4,"priority":2,"in-review":2,"medium-priority":1,"resolved":1},"pull_request_labels_count":{},"issue_author_associations_count":{"NONE":26,"MEMBER":7},"pull_request_author_associations_count":{"MEMBER":6,"NONE":1,"CONTRIBUTOR":1},"issue_authors":{"Jfortin1":5,"panxiaoguang":4,"MatthewPace98":3,"abearab":3,"ltHobbes":2,"RussBainer":2,"stefanusbernard":2,"frvcw":2,"nicodemus88":2,"fsnibs10":1,"adrbmdns":1,"NathanDHarry":1,"tonyreina":1,"dr-jwb":1,"m-jahn":1,"sckinta":1,"liechi":1},"pull_request_authors":{"ltHobbes":4,"Jfortin1":2,"hpages":2},"host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-08T00:00:17.013Z","repositories_count":10164087,"issues_count":31988492,"pull_requests_count":100218704,"authors_count":10728235,"icon_url":"https://github.com/github.png","host_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories","owners_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/owners","authors_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors"},"past_year_issue_labels_count":{"question":1},"past_year_pull_request_labels_count":{},"past_year_issue_author_associations_count":{"NONE":3},"past_year_pull_request_author_associations_count":{},"past_year_issue_authors":{"liechi":1,"NathanDHarry":1,"sckinta":1},"past_year_pull_request_authors":{},"maintainers":[{"login":"Jfortin1","count":7,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/Jfortin1"},{"login":"ltHobbes","count":6,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/ltHobbes"}],"active_maintainers":[]},"events":{"total":{"IssuesEvent":4,"WatchEvent":3,"IssueCommentEvent":2,"PushEvent":4},"last_year":{"IssuesEvent":4,"WatchEvent":3,"IssueCommentEvent":2,"PushEvent":4}},"keywords":["bioconductor","bioconductor-package","crispr","crispr-cas9","crispr-design","crispr-target","genomics-analysis","grna","grna-sequence","grna-sequences","sgrna","sgrna-design"],"dependencies":[{"ecosystem":"cran","filepath":"DESCRIPTION","sha":null,"kind":"manifest","created_at":"2022-08-16T02:40:22.060Z","updated_at":"2022-08-16T02:40:22.060Z","repository_link":"https://github.com/crisprVerse/crisprDesign/blob/devel/DESCRIPTION","dependencies":[{"id":1844379234,"package_name":"R","ecosystem":"cran","requirements":"\u003e= 4.2.0","direct":true,"kind":"depends","optional":false},{"id":1844379235,"package_name":"crisprBase","ecosystem":"cran","requirements":"\u003e= 1.1.3","direct":true,"kind":"depends","optional":false},{"id":1844379236,"package_name":"AnnotationDbi","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":1844379237,"package_name":"BiocGenerics","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":1844379238,"package_name":"Biostrings","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":1844379239,"package_name":"BSgenome","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":1844379240,"package_name":"crisprBowtie","ecosystem":"cran","requirements":"\u003e= 0.99.8","direct":true,"kind":"imports","optional":false},{"id":1844379241,"package_name":"crisprScore","ecosystem":"cran","requirements":"\u003e= 1.1.6","direct":true,"kind":"imports","optional":false},{"id":1844379242,"package_name":"GenomeInfoDb","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":1844379243,"package_name":"GenomicFeatures","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":1844379244,"package_name":"GenomicRanges","ecosystem":"cran","requirements":"\u003e= 1.38.0","direct":true,"kind":"imports","optional":false},{"id":1844379245,"package_name":"IRanges","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":1844379246,"package_name":"Matrix","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":1844379247,"package_name":"MatrixGenerics","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":1844379248,"package_name":"methods","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":1844379249,"package_name":"rtracklayer","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":1844379250,"package_name":"S4Vectors","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":1844379251,"package_name":"stats","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":1844379252,"package_name":"utils","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":1844379253,"package_name":"VariantAnnotation","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":1844379254,"package_name":"biomaRt","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":1844379255,"package_name":"BSgenome.Hsapiens.UCSC.hg38","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":1844379256,"package_name":"BSgenome.Mmusculus.UCSC.mm10","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":1844379257,"package_name":"BiocStyle","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":1844379258,"package_name":"crisprBwa","ecosystem":"cran","requirements":"\u003e= 0.99.7","direct":true,"kind":"suggests","optional":false},{"id":1844379259,"package_name":"knitr","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":1844379260,"package_name":"rmarkdown","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":1844379261,"package_name":"Rbowtie","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":1844379262,"package_name":"Rbwa","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":1844379263,"package_name":"RCurl","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":1844379264,"package_name":"testthat","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false}]}],"score":14.514086973519102,"created_at":"2025-09-08T10:46:10.844Z","updated_at":"2025-10-07T08:24:09.837Z","avatar_url":"https://github.com/crisprVerse.png","language":"R","category":null,"sub_category":null,"monthly_downloads":0,"funding_links":[],"readme_doi_urls":[],"works":{},"citation_counts":{},"total_citations":0,"keywords_from_contributors":["crispr-analysis"],"project_url":"https://science.ecosyste.ms/api/v1/projects/61691","html_url":"https://science.ecosyste.ms/projects/61691"}