{"id":61775,"name":"spatialDE","description":"R wrapper for SpatialDE","url":"https://github.com/sales-lab/spatialde","last_synced_at":"2025-09-08T12:33:09.338Z","repository":{"id":47182205,"uuid":"322573589","full_name":"sales-lab/spatialDE","owner":"sales-lab","description":"R wrapper for SpatialDE","archived":false,"fork":false,"pushed_at":"2025-04-16T06:27:37.000Z","size":1538,"stargazers_count":3,"open_issues_count":0,"forks_count":3,"subscribers_count":3,"default_branch":"main","last_synced_at":"2025-08-20T22:38:50.413Z","etag":null,"topics":["python","r","spatial-data","transcriptomics","wrapper"],"latest_commit_sha":null,"homepage":"","language":"R","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"other","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/sales-lab.png","metadata":{"files":{"readme":"README.Rmd","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null}},"created_at":"2020-12-18T11:18:55.000Z","updated_at":"2025-04-15T12:59:38.000Z","dependencies_parsed_at":"2025-05-05T03:18:07.308Z","dependency_job_id":"1ef7e92f-036e-4644-86a2-33cabf618ddc","html_url":"https://github.com/sales-lab/spatialDE","commit_stats":{"total_commits":235,"total_committers":8,"mean_commits":29.375,"dds":0.5446808510638298,"last_synced_commit":"6b99d2906dec0da0fae5314c5fad31ac3f371e75"},"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"purl":"pkg:github/sales-lab/spatialDE","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/sales-lab%2FspatialDE","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/sales-lab%2FspatialDE/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/sales-lab%2FspatialDE/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/sales-lab%2FspatialDE/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/sales-lab","download_url":"https://codeload.github.com/sales-lab/spatialDE/tar.gz/refs/heads/main","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/sales-lab%2FspatialDE/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":274174106,"owners_count":25235202,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-09-08T02:00:09.813Z","response_time":121,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"owner":{"login":"sales-lab","name":"Sales Lab","uuid":"31203018","kind":"organization","description":"","email":null,"website":"https://sales.bio.unipd.it/","location":null,"twitter":null,"company":null,"icon_url":"https://avatars.githubusercontent.com/u/31203018?v=4","repositories_count":30,"last_synced_at":"2024-03-15T04:09:10.281Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/sales-lab","funding_links":[],"total_stars":14,"followers":null,"following":null,"created_at":"2023-02-25T02:23:35.209Z","updated_at":"2024-03-15T04:09:14.172Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/sales-lab","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/sales-lab/repositories"},"packages":[{"id":8420766,"name":"spatialDE","ecosystem":"bioconductor","description":"R wrapper for SpatialDE","homepage":"https://github.com/sales-lab/spatialDE https://bioconductor.org/packages/spatialDE/ ","licenses":"MIT + file LICENSE","normalized_licenses":["MIT"],"repository_url":"https://github.com/sales-lab/spatialDE","keywords_array":["Software","Transcriptomics"],"namespace":null,"versions_count":6,"first_release_published_at":"2023-10-12T15:01:56.172Z","latest_release_published_at":"2025-05-05T03:17:59.586Z","latest_release_number":"1.14.1","last_synced_at":"2025-08-20T22:21:15.957Z","created_at":"2023-10-12T15:01:55.941Z","updated_at":"2025-08-20T22:24:59.042Z","registry_url":"https://bioconductor.org/packages/spatialDE","install_command":null,"documentation_url":"https://bioconductor.org/packages/release/bioc/vignettes/spatialDE/inst/doc/spatialDE.pdf","metadata":{},"repo_metadata":{"id":47182205,"uuid":"322573589","full_name":"sales-lab/spatialDE","owner":"sales-lab","description":"R wrapper for SpatialDE","archived":false,"fork":false,"pushed_at":"2025-04-16T06:27:37.000Z","size":1538,"stargazers_count":3,"open_issues_count":0,"forks_count":3,"subscribers_count":3,"default_branch":"main","last_synced_at":"2025-07-14T17:21:59.783Z","etag":null,"topics":["python","r","spatial-data","transcriptomics","wrapper"],"latest_commit_sha":null,"homepage":"","language":"R","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"other","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/sales-lab.png","metadata":{"files":{"readme":"README.Rmd","changelog":null,"contributing":null,"funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null}},"created_at":"2020-12-18T11:18:55.000Z","updated_at":"2025-04-15T12:59:38.000Z","dependencies_parsed_at":"2025-05-05T03:18:07.308Z","dependency_job_id":"1ef7e92f-036e-4644-86a2-33cabf618ddc","html_url":"https://github.com/sales-lab/spatialDE","commit_stats":{"total_commits":235,"total_committers":8,"mean_commits":29.375,"dds":0.5446808510638298,"last_synced_commit":"6b99d2906dec0da0fae5314c5fad31ac3f371e75"},"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"purl":"pkg:github/sales-lab/spatialDE","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/sales-lab%2FspatialDE","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/sales-lab%2FspatialDE/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/sales-lab%2FspatialDE/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/sales-lab%2FspatialDE/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/sales-lab","download_url":"https://codeload.github.com/sales-lab/spatialDE/tar.gz/refs/heads/main","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/sales-lab%2FspatialDE/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":271395621,"owners_count":24752140,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-08-20T02:00:09.606Z","response_time":69,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"},"owner_record":{"login":"sales-lab","name":"Sales Lab","uuid":"31203018","kind":"organization","description":"","email":null,"website":"https://sales.bio.unipd.it/","location":null,"twitter":null,"company":null,"icon_url":"https://avatars.githubusercontent.com/u/31203018?v=4","repositories_count":30,"last_synced_at":"2024-03-15T04:09:10.281Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/sales-lab","funding_links":[],"total_stars":14,"followers":null,"following":null,"created_at":"2023-02-25T02:23:35.209Z","updated_at":"2024-03-15T04:09:14.172Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/sales-lab","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/sales-lab/repositories"},"tags":[]},"repo_metadata_updated_at":"2025-08-20T22:24:59.042Z","dependent_packages_count":0,"downloads":8673,"downloads_period":"total","dependent_repos_count":0,"rankings":{"downloads":83.09417040358744,"dependent_repos_count":0.0,"dependent_packages_count":0.0,"stargazers_count":19.46564885496183,"forks_count":5.084745762711865,"docker_downloads_count":null,"average":21.528913004252228},"purl":"pkg:bioconductor/spatialDE","advisories":[],"docker_usage_url":"https://docker.ecosyste.ms/usage/bioconductor/spatialDE","docker_dependents_count":null,"docker_downloads_count":null,"usage_url":"https://repos.ecosyste.ms/usage/bioconductor/spatialDE","dependent_repositories_url":"https://repos.ecosyste.ms/api/v1/usage/bioconductor/spatialDE/dependencies","status":null,"funding_links":[],"critical":null,"issue_metadata":{"last_synced_at":"2025-07-14T15:19:24.367Z","issues_count":8,"pull_requests_count":18,"avg_time_to_close_issue":10593906.875,"avg_time_to_close_pull_request":655407.2777777778,"issues_closed_count":8,"pull_requests_closed_count":18,"pull_request_authors_count":4,"issue_authors_count":5,"avg_comments_per_issue":1.875,"avg_comments_per_pull_request":0.2222222222222222,"merged_pull_requests_count":18,"bot_issues_count":0,"bot_pull_requests_count":0,"past_year_issues_count":0,"past_year_pull_requests_count":0,"past_year_avg_time_to_close_issue":null,"past_year_avg_time_to_close_pull_request":null,"past_year_issues_closed_count":0,"past_year_pull_requests_closed_count":0,"past_year_pull_request_authors_count":0,"past_year_issue_authors_count":0,"past_year_avg_comments_per_issue":null,"past_year_avg_comments_per_pull_request":null,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":0,"issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/sales-lab%2Fspatialde/issues","maintainers":[{"login":"milanmlft","count":14,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/milanmlft"},{"login":"davidecrs","count":7,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/davidecrs"},{"login":"gbrsales","count":1,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/gbrsales"},{"login":"lambdamoses","count":1,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/lambdamoses"}],"active_maintainers":[]},"versions_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/packages/spatialDE/versions","version_numbers_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/packages/spatialDE/version_numbers","dependent_packages_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/packages/spatialDE/dependent_packages","related_packages_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/packages/spatialDE/related_packages","maintainers":[{"uuid":"gabriele.sales@unipd.it","login":null,"name":"Gabriele Sales","email":"gabriele.sales@unipd.it","url":null,"packages_count":2,"html_url":null,"role":null,"created_at":"2023-11-01T00:02:37.546Z","updated_at":"2023-11-01T00:02:37.546Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/maintainers/gabriele.sales@unipd.it/packages"}],"registry":{"name":"bioconductor.org","url":"https://bioconductor.org","ecosystem":"bioconductor","default":true,"packages_count":2505,"maintainers_count":3164,"namespaces_count":0,"keywords_count":1086,"github":"Bioconductor","metadata":{"funded_packages_count":3},"icon_url":"https://github.com/Bioconductor.png","created_at":"2023-10-12T14:09:56.428Z","updated_at":"2025-09-08T06:51:28.460Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/packages","maintainers_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/maintainers","namespaces_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/namespaces"}}],"commits":{"id":1383400,"full_name":"sales-lab/spatialde","default_branch":"main","committers":[{"name":"davidecrs","email":"corso.davide.92@gmail.com","login":null,"count":107},{"name":"Milan Malfait","email":"milan.malfait94@gmail.com","login":null,"count":106},{"name":"Gabriele Sales","email":"gbrsales@gmail.com","login":null,"count":11},{"name":"Nitesh Turaga","email":"nitesh.turaga@gmail.com","login":null,"count":4},{"name":"Lambda Moses","email":"dlu2@caltech.edu","login":null,"count":3},{"name":"J Wokaty","email":"jennifer.wokaty@sph.cuny.edu","login":null,"count":2},{"name":"Hervé Pagès","email":"hpages.on.github@gmail.com","login":null,"count":1},{"name":"Davide Corso","email":"51702484+davidecrs","login":"davidecrs","count":1}],"total_commits":235,"total_committers":8,"total_bot_commits":0,"total_bot_committers":0,"mean_commits":29.375,"dds":0.5446808510638298,"past_year_committers":[{"name":"Gabriele Sales","email":"gbrsales@gmail.com","login":null,"count":9},{"name":"davidecrs","email":"corso.davide.92@gmail.com","login":null,"count":6},{"name":"J Wokaty","email":"jennifer.wokaty@sph.cuny.edu","login":null,"count":2}],"past_year_total_commits":17,"past_year_total_committers":3,"past_year_total_bot_commits":0,"past_year_total_bot_committers":0,"past_year_mean_commits":5.666666666666667,"past_year_dds":0.47058823529411764,"last_synced_at":"2024-01-29T19:13:33.628Z","last_synced_commit":"6b99d2906dec0da0fae5314c5fad31ac3f371e75","created_at":"2023-09-22T00:09:57.988Z","updated_at":"2024-01-29T19:13:33.629Z","commits_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories/sales-lab%2Fspatialde/commits","host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-05T00:00:10.343Z","repositories_count":5480019,"commits_count":853389012,"contributors_count":31098138,"owners_count":906558,"icon_url":"https://github.com/github.png","host_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories"}},"issues_stats":{"full_name":"sales-lab/spatialde","html_url":"https://github.com/sales-lab/spatialde","last_synced_at":"2025-08-20T22:25:59.099Z","status":"error","issues_count":8,"pull_requests_count":18,"avg_time_to_close_issue":10593906.875,"avg_time_to_close_pull_request":655407.2777777778,"issues_closed_count":8,"pull_requests_closed_count":18,"pull_request_authors_count":4,"issue_authors_count":5,"avg_comments_per_issue":1.875,"avg_comments_per_pull_request":0.2222222222222222,"merged_pull_requests_count":18,"bot_issues_count":0,"bot_pull_requests_count":0,"past_year_issues_count":0,"past_year_pull_requests_count":0,"past_year_avg_time_to_close_issue":null,"past_year_avg_time_to_close_pull_request":null,"past_year_issues_closed_count":0,"past_year_pull_requests_closed_count":0,"past_year_pull_request_authors_count":0,"past_year_issue_authors_count":0,"past_year_avg_comments_per_issue":null,"past_year_avg_comments_per_pull_request":null,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":0,"created_at":"2023-09-22T00:10:05.586Z","updated_at":"2025-09-01T05:14:05.245Z","repository_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/sales-lab%2Fspatialde","issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/sales-lab%2Fspatialde/issues","issue_labels_count":{"TODO":4,"bug":1},"pull_request_labels_count":{},"issue_author_associations_count":{"COLLABORATOR":5,"NONE":3},"pull_request_author_associations_count":{"COLLABORATOR":17,"MEMBER":1},"issue_authors":{"davidecrs":3,"milanmlft":2,"Vivianstats":1,"forrwill":1,"kinnaryshah":1},"pull_request_authors":{"milanmlft":12,"davidecrs":4,"gbrsales":1,"lambdamoses":1},"host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-01T00:00:07.725Z","repositories_count":9960864,"issues_count":29599243,"pull_requests_count":86024997,"authors_count":9558114,"icon_url":"https://github.com/github.png","host_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories","owners_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/owners","authors_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors"},"past_year_issue_labels_count":{},"past_year_pull_request_labels_count":{},"past_year_issue_author_associations_count":{},"past_year_pull_request_author_associations_count":{},"past_year_issue_authors":{},"past_year_pull_request_authors":{},"maintainers":[{"login":"milanmlft","count":14,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/milanmlft"},{"login":"davidecrs","count":7,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/davidecrs"},{"login":"gbrsales","count":1,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/gbrsales"},{"login":"lambdamoses","count":1,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/lambdamoses"}],"active_maintainers":[]},"events":{"total":{"PushEvent":3},"last_year":{"PushEvent":3}},"keywords":["python","r","spatial-data","transcriptomics","wrapper"],"dependencies":[{"ecosystem":"cran","filepath":"DESCRIPTION","sha":null,"kind":"manifest","created_at":"2022-08-26T12:31:05.972Z","updated_at":"2022-08-26T12:31:05.972Z","repository_link":"https://github.com/sales-lab/spatialDE/blob/main/DESCRIPTION","dependencies":[{"id":2814458143,"package_name":"R","ecosystem":"cran","requirements":"\u003e= 4.1","direct":true,"kind":"depends","optional":false},{"id":2814458144,"package_name":"reticulate","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":2814458145,"package_name":"basilisk","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":2814458146,"package_name":"checkmate","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":2814458147,"package_name":"stats","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":2814458148,"package_name":"SpatialExperiment","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":2814458149,"package_name":"methods","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":2814458150,"package_name":"SummarizedExperiment","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":2814458151,"package_name":"Matrix","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":2814458152,"package_name":"S4Vectors","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":2814458153,"package_name":"ggplot2","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":2814458154,"package_name":"ggrepel","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":2814458155,"package_name":"scales","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":2814458156,"package_name":"gridExtra","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":2814458157,"package_name":"knitr","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":2814458158,"package_name":"BiocStyle","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":2814458159,"package_name":"rmarkdown","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":2814458160,"package_name":"testthat","ecosystem":"cran","requirements":"\u003e= 3.0.0","direct":true,"kind":"suggests","optional":false}]},{"ecosystem":"actions","filepath":".github/workflows/check-bioc.yml","sha":null,"kind":"manifest","created_at":"2023-02-17T19:31:15.772Z","updated_at":"2023-02-17T19:31:15.772Z","repository_link":"https://github.com/sales-lab/spatialDE/blob/main/.github/workflows/check-bioc.yml","dependencies":[{"id":7745034781,"package_name":"actions/checkout","ecosystem":"actions","requirements":"v3","direct":true,"kind":"composite","optional":false},{"id":7745034782,"package_name":"r-lib/actions/setup-r","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":7745034783,"package_name":"r-lib/actions/setup-pandoc","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":7745034784,"package_name":"actions/cache","ecosystem":"actions","requirements":"v3","direct":true,"kind":"composite","optional":false},{"id":7745034785,"package_name":"JamesIves/github-pages-deploy-action","ecosystem":"actions","requirements":"releases/v4","direct":true,"kind":"composite","optional":false},{"id":7745034786,"package_name":"actions/upload-artifact","ecosystem":"actions","requirements":"master","direct":true,"kind":"composite","optional":false},{"id":7745034787,"package_name":"docker/build-push-action","ecosystem":"actions","requirements":"v1","direct":true,"kind":"composite","optional":false}]}],"score":12.246139154743258,"created_at":"2025-09-08T10:46:39.558Z","updated_at":"2025-10-07T08:24:11.309Z","avatar_url":"https://github.com/sales-lab.png","language":"R","category":null,"sub_category":null,"monthly_downloads":0,"funding_links":[],"readme_doi_urls":["https://doi.org/10.1038/nmeth.4636"],"works":{},"citation_counts":{},"total_citations":0,"keywords_from_contributors":["bioconductor","gene","bioconductor-package","u24ca289073","immune-repertoire","genomics","sequencing","ontology","actions","core-package"],"project_url":"https://science.ecosyste.ms/api/v1/projects/61775","html_url":"https://science.ecosyste.ms/projects/61775"}