{"id":61823,"name":"brainflowprobes","description":"A package to annotate and visualize expression of candidate BrainFlow probe sequences. ","url":"https://github.com/lieberinstitute/brainflowprobes","last_synced_at":"2025-09-08T12:33:47.385Z","repository":{"id":108472839,"uuid":"193170054","full_name":"LieberInstitute/brainflowprobes","owner":"LieberInstitute","description":"A package to annotate and visualize expression of candidate BrainFlow probe sequences. ","archived":false,"fork":false,"pushed_at":"2024-12-10T20:55:29.000Z","size":16692,"stargazers_count":0,"open_issues_count":0,"forks_count":0,"subscribers_count":3,"default_branch":"devel","last_synced_at":"2025-06-30T00:42:23.580Z","etag":null,"topics":["bioconductor","rstats"],"latest_commit_sha":null,"homepage":"http://LieberInstitute.github.io/brainflowprobes/","language":"R","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":null,"status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/LieberInstitute.png","metadata":{"files":{"readme":"README.Rmd","changelog":"NEWS.md","contributing":".github/CONTRIBUTING.md","funding":null,"license":null,"code_of_conduct":".github/CODE_OF_CONDUCT.md","threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":".github/SUPPORT.md","governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null}},"created_at":"2019-06-21T23:17:48.000Z","updated_at":"2024-12-10T20:55:37.000Z","dependencies_parsed_at":null,"dependency_job_id":"0f83e907-c06d-46d8-96e7-74b173928b3c","html_url":"https://github.com/LieberInstitute/brainflowprobes","commit_stats":{"total_commits":73,"total_committers":7,"mean_commits":"10.428571428571429","dds":0.6849315068493151,"last_synced_commit":"8a8e65c92a5197bedaf47b6d3d3a5e138e55e699"},"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"purl":"pkg:github/LieberInstitute/brainflowprobes","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/LieberInstitute%2Fbrainflowprobes","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/LieberInstitute%2Fbrainflowprobes/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/LieberInstitute%2Fbrainflowprobes/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/LieberInstitute%2Fbrainflowprobes/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/LieberInstitute","download_url":"https://codeload.github.com/LieberInstitute/brainflowprobes/tar.gz/refs/heads/devel","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/LieberInstitute%2Fbrainflowprobes/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":274174267,"owners_count":25235203,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-09-08T02:00:09.813Z","response_time":121,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"owner":{"login":"LieberInstitute","name":"Lieber Institute for Brain Development ","uuid":"18147086","kind":"organization","description":"","email":"info@libd.org","website":"www.libd.org","location":"Baltimore, MD","twitter":null,"company":null,"icon_url":"https://avatars.githubusercontent.com/u/18147086?v=4","repositories_count":40,"last_synced_at":"2023-03-05T19:37:04.789Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/LieberInstitute","funding_links":[],"total_stars":null,"followers":null,"following":null,"created_at":"2022-11-15T21:41:06.289Z","updated_at":"2023-03-05T19:37:04.857Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/LieberInstitute","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/LieberInstitute/repositories"},"packages":[{"id":8418903,"name":"brainflowprobes","ecosystem":"bioconductor","description":"Plots and annotation for choosing BrainFlow target probe sequence","homepage":"https://github.com/LieberInstitute/brainflowprobes ","licenses":"Artistic-2.0","normalized_licenses":["Artistic-2.0"],"repository_url":"https://github.com/LieberInstitute/brainflowprobes","keywords_array":["Coverage","ExperimentalDesign","FlowCytometry","GeneTarget","Software","Transcriptomics","Visualization"],"namespace":null,"versions_count":4,"first_release_published_at":"2023-10-12T14:22:14.927Z","latest_release_published_at":"2024-11-18T16:47:52.703Z","latest_release_number":"1.20.0","last_synced_at":"2025-06-30T00:35:31.525Z","created_at":"2023-10-12T14:22:14.753Z","updated_at":"2025-06-30T00:35:31.525Z","registry_url":"https://bioconductor.org/packages/brainflowprobes","install_command":null,"documentation_url":"https://bioconductor.org/packages/release/bioc/vignettes/brainflowprobes/inst/doc/brainflowprobes.pdf","metadata":{},"repo_metadata":{"id":108472839,"uuid":"193170054","full_name":"LieberInstitute/brainflowprobes","owner":"LieberInstitute","description":"A package to annotate and visualize expression of candidate BrainFlow probe sequences. ","archived":false,"fork":false,"pushed_at":"2024-12-10T20:55:29.000Z","size":16692,"stargazers_count":0,"open_issues_count":0,"forks_count":0,"subscribers_count":3,"default_branch":"devel","last_synced_at":"2025-03-28T00:42:53.348Z","etag":null,"topics":["bioconductor","rstats"],"latest_commit_sha":null,"homepage":"http://LieberInstitute.github.io/brainflowprobes/","language":"R","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":null,"status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/LieberInstitute.png","metadata":{"files":{"readme":"README.Rmd","changelog":"NEWS.md","contributing":".github/CONTRIBUTING.md","funding":null,"license":null,"code_of_conduct":".github/CODE_OF_CONDUCT.md","threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":".github/SUPPORT.md","governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null}},"created_at":"2019-06-21T23:17:48.000Z","updated_at":"2024-12-10T20:55:37.000Z","dependencies_parsed_at":null,"dependency_job_id":"0f83e907-c06d-46d8-96e7-74b173928b3c","html_url":"https://github.com/LieberInstitute/brainflowprobes","commit_stats":{"total_commits":73,"total_committers":7,"mean_commits":"10.428571428571429","dds":0.6849315068493151,"last_synced_commit":"8a8e65c92a5197bedaf47b6d3d3a5e138e55e699"},"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/LieberInstitute%2Fbrainflowprobes","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/LieberInstitute%2Fbrainflowprobes/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/LieberInstitute%2Fbrainflowprobes/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/LieberInstitute%2Fbrainflowprobes/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/LieberInstitute","download_url":"https://codeload.github.com/LieberInstitute/brainflowprobes/tar.gz/refs/heads/devel","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":246262491,"owners_count":20749170,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"},"owner_record":{"login":"LieberInstitute","name":"Lieber Institute for Brain Development ","uuid":"18147086","kind":"organization","description":"","email":"info@libd.org","website":"www.libd.org","location":"Baltimore, MD","twitter":null,"company":null,"icon_url":"https://avatars.githubusercontent.com/u/18147086?v=4","repositories_count":40,"last_synced_at":"2023-03-05T19:37:04.789Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/LieberInstitute","funding_links":[],"total_stars":null,"followers":null,"following":null,"created_at":"2022-11-15T21:41:06.289Z","updated_at":"2023-03-05T19:37:04.857Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/LieberInstitute","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/LieberInstitute/repositories"},"tags":[]},"repo_metadata_updated_at":"2025-04-14T20:49:06.265Z","dependent_packages_count":0,"downloads":5901,"downloads_period":"total","dependent_repos_count":0,"rankings":{"downloads":76.17328519855594,"dependent_repos_count":0.0,"dependent_packages_count":0.0,"stargazers_count":33.20610687022901,"forks_count":19.753086419753085,"docker_downloads_count":null,"average":25.826495697707607},"purl":"pkg:bioconductor/brainflowprobes","advisories":[],"docker_usage_url":"https://docker.ecosyste.ms/usage/bioconductor/brainflowprobes","docker_dependents_count":null,"docker_downloads_count":null,"usage_url":"https://repos.ecosyste.ms/usage/bioconductor/brainflowprobes","dependent_repositories_url":"https://repos.ecosyste.ms/api/v1/usage/bioconductor/brainflowprobes/dependencies","status":"removed","funding_links":[],"critical":null,"issue_metadata":{"last_synced_at":"2025-04-14T00:34:54.496Z","issues_count":0,"pull_requests_count":0,"avg_time_to_close_issue":null,"avg_time_to_close_pull_request":null,"issues_closed_count":0,"pull_requests_closed_count":0,"pull_request_authors_count":0,"issue_authors_count":0,"avg_comments_per_issue":null,"avg_comments_per_pull_request":null,"merged_pull_requests_count":0,"bot_issues_count":0,"bot_pull_requests_count":0,"past_year_issues_count":0,"past_year_pull_requests_count":0,"past_year_avg_time_to_close_issue":null,"past_year_avg_time_to_close_pull_request":null,"past_year_issues_closed_count":0,"past_year_pull_requests_closed_count":0,"past_year_pull_request_authors_count":0,"past_year_issue_authors_count":0,"past_year_avg_comments_per_issue":null,"past_year_avg_comments_per_pull_request":null,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":0,"issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/LieberInstitute%2Fbrainflowprobes/issues","maintainers":[],"active_maintainers":[]},"versions_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/packages/brainflowprobes/versions","version_numbers_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/packages/brainflowprobes/version_numbers","dependent_packages_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/packages/brainflowprobes/dependent_packages","related_packages_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/packages/brainflowprobes/related_packages","maintainers":[{"uuid":"amanda.joy.price@gmail.com","login":null,"name":"Amanda Price","email":"amanda.joy.price@gmail.com","url":null,"packages_count":1,"html_url":null,"role":null,"created_at":"2023-11-20T10:43:24.259Z","updated_at":"2023-11-20T10:43:24.259Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/maintainers/amanda.joy.price@gmail.com/packages"}],"registry":{"name":"bioconductor.org","url":"https://bioconductor.org","ecosystem":"bioconductor","default":true,"packages_count":2505,"maintainers_count":3164,"namespaces_count":0,"keywords_count":1086,"github":"Bioconductor","metadata":{"funded_packages_count":3},"icon_url":"https://github.com/Bioconductor.png","created_at":"2023-10-12T14:09:56.428Z","updated_at":"2025-09-08T06:51:28.460Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/packages","maintainers_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/maintainers","namespaces_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/namespaces"}}],"commits":{"id":1402786,"full_name":"LieberInstitute/brainflowprobes","default_branch":"devel","committers":[{"name":"Leonardo Collado Torres","email":"lcolladotor@gmail.com","login":"lcolladotor","count":35},{"name":"aprice26","email":"amanda.joy.price@gmail.com","login":"aprice26","count":23},{"name":"Nitesh Turaga","email":"nitesh.turaga@gmail.com","login":"nturaga","count":12},{"name":"J Wokaty","email":"jennifer.wokaty@sph.cuny.edu","login":"jwokaty","count":10},{"name":"lshep","email":"lori.shepherd@roswellpark.org","login":"lshep","count":1},{"name":"Hervé Pagès","email":"hpages@fredhutch.org","login":"hpages","count":1}],"total_commits":82,"total_committers":6,"total_bot_commits":0,"total_bot_committers":0,"mean_commits":13.666666666666666,"dds":0.5731707317073171,"past_year_committers":[{"name":"lcolladotor","email":"lcolladotor@gmail.com","login":"lcolladotor","count":2},{"name":"J Wokaty","email":"jennifer.wokaty@sph.cuny.edu","login":"jwokaty","count":2},{"name":"lshep","email":"lori.shepherd@roswellpark.org","login":"lshep","count":1}],"past_year_total_commits":5,"past_year_total_committers":3,"past_year_total_bot_commits":0,"past_year_total_bot_committers":0,"past_year_mean_commits":1.6666666666666667,"past_year_dds":0.6,"last_synced_at":"2025-07-01T06:59:40.713Z","last_synced_commit":"5d3c595d0c07a9abbefbfd546fb010bc1eff8489","created_at":"2023-10-25T13:03:08.816Z","updated_at":"2025-07-01T06:59:53.191Z","commits_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories/LieberInstitute%2Fbrainflowprobes/commits","host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-05T00:00:10.343Z","repositories_count":5480019,"commits_count":853389012,"contributors_count":31098138,"owners_count":906558,"icon_url":"https://github.com/github.png","host_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories"}},"issues_stats":{"full_name":"LieberInstitute/brainflowprobes","html_url":"https://github.com/LieberInstitute/brainflowprobes","last_synced_at":"2025-06-30T00:35:09.334Z","status":null,"issues_count":0,"pull_requests_count":0,"avg_time_to_close_issue":null,"avg_time_to_close_pull_request":null,"issues_closed_count":0,"pull_requests_closed_count":0,"pull_request_authors_count":0,"issue_authors_count":0,"avg_comments_per_issue":null,"avg_comments_per_pull_request":null,"merged_pull_requests_count":0,"bot_issues_count":0,"bot_pull_requests_count":0,"past_year_issues_count":0,"past_year_pull_requests_count":0,"past_year_avg_time_to_close_issue":null,"past_year_avg_time_to_close_pull_request":null,"past_year_issues_closed_count":0,"past_year_pull_requests_closed_count":0,"past_year_pull_request_authors_count":0,"past_year_issue_authors_count":0,"past_year_avg_comments_per_issue":null,"past_year_avg_comments_per_pull_request":null,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":0,"created_at":"2024-10-09T00:11:22.687Z","updated_at":"2025-06-30T00:35:09.334Z","repository_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/LieberInstitute%2Fbrainflowprobes","issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/LieberInstitute%2Fbrainflowprobes/issues","issue_labels_count":{},"pull_request_labels_count":{},"issue_author_associations_count":{},"pull_request_author_associations_count":{},"issue_authors":{},"pull_request_authors":{},"host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-08T00:00:17.013Z","repositories_count":10164853,"issues_count":31989996,"pull_requests_count":100212161,"authors_count":10728603,"icon_url":"https://github.com/github.png","host_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories","owners_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/owners","authors_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors"},"past_year_issue_labels_count":{},"past_year_pull_request_labels_count":{},"past_year_issue_author_associations_count":{},"past_year_pull_request_author_associations_count":{},"past_year_issue_authors":{},"past_year_pull_request_authors":{},"maintainers":[],"active_maintainers":[]},"events":{"total":{"PushEvent":1},"last_year":{"PushEvent":1}},"keywords":["bioconductor","rstats"],"dependencies":[],"score":null,"created_at":"2025-09-08T10:46:40.049Z","updated_at":"2025-10-07T08:24:12.194Z","avatar_url":"https://github.com/LieberInstitute.png","language":"R","category":null,"sub_category":null,"monthly_downloads":0,"funding_links":[],"readme_doi_urls":[],"works":{},"citation_counts":{},"total_citations":0,"keywords_from_contributors":["bioconductor-package","gene","genomics","recount","proteomics","sequences","junction","rnaseq","derfinder","illumina"],"project_url":"https://science.ecosyste.ms/api/v1/projects/61823","html_url":"https://science.ecosyste.ms/projects/61823"}