{"id":62552,"name":"IFC","description":"Tools for Imaging Flow Cytometry","url":"https://github.com/gitdemont/ifc","last_synced_at":"2025-09-08T12:45:42.702Z","repository":{"id":45243883,"uuid":"249818464","full_name":"gitdemont/IFC","owner":"gitdemont","description":"Tools for Imaging Flow Cytometry","archived":false,"fork":false,"pushed_at":"2025-07-01T10:15:59.000Z","size":2107,"stargazers_count":5,"open_issues_count":3,"forks_count":2,"subscribers_count":1,"default_branch":"master","last_synced_at":"2025-07-01T11:28:52.116Z","etag":null,"topics":["cytometry","cytometry-data","flow","flow-cytometry","flow-cytometry-analysis","flow-cytometry-data","flow-cytometry-files","ifc","image","imaging-flow-cytometry","imaging-flow-cytometry-data","microscopy","r"],"latest_commit_sha":null,"homepage":"","language":"R","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"gpl-3.0","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/gitdemont.png","metadata":{"files":{"readme":"README.md","changelog":"NEWS.md","contributing":null,"funding":null,"license":"LICENSE.md","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null}},"created_at":"2020-03-24T21:09:03.000Z","updated_at":"2025-07-01T10:16:03.000Z","dependencies_parsed_at":"2025-06-12T09:38:11.880Z","dependency_job_id":"6ded55d2-8dc8-4838-9822-7a6926efb75f","html_url":"https://github.com/gitdemont/IFC","commit_stats":{"total_commits":873,"total_committers":3,"mean_commits":291.0,"dds":0.06872852233676974,"last_synced_commit":"763e1cdd6d22b031464008124ba1ed14ba31247a"},"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"purl":"pkg:github/gitdemont/IFC","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/gitdemont%2FIFC","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/gitdemont%2FIFC/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/gitdemont%2FIFC/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/gitdemont%2FIFC/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/gitdemont","download_url":"https://codeload.github.com/gitdemont/IFC/tar.gz/refs/heads/master","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/gitdemont%2FIFC/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":274188081,"owners_count":25237847,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-09-08T02:00:09.813Z","response_time":121,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"owner":null,"packages":[{"id":429291,"name":"IFC","ecosystem":"cran","description":"Tools for Imaging Flow Cytometry","homepage":null,"licenses":"GPL-3","normalized_licenses":["GPL-3.0"],"repository_url":"https://github.com/gitdemont/IFC","keywords_array":[],"namespace":null,"versions_count":10,"first_release_published_at":"2020-07-13T17:40:00.000Z","latest_release_published_at":"2023-09-13T00:00:00.000Z","latest_release_number":"0.2.1","last_synced_at":"2025-09-06T01:07:02.066Z","created_at":"2022-04-06T20:31:43.856Z","updated_at":"2025-09-06T01:07:02.066Z","registry_url":"https://cran.r-project.org/package=IFC","install_command":null,"documentation_url":"http://cran.r-project.org/web/packages/IFC/IFC.pdf","metadata":{},"repo_metadata":{"id":45243883,"uuid":"249818464","full_name":"gitdemont/IFC","owner":"gitdemont","description":"Tools for Imaging Flow Cytometry","archived":false,"fork":false,"pushed_at":"2024-04-03T12:35:20.000Z","size":2361,"stargazers_count":4,"open_issues_count":2,"forks_count":2,"subscribers_count":1,"default_branch":"master","last_synced_at":"2024-04-03T13:46:06.476Z","etag":null,"topics":["cytometry","cytometry-data","flow","flow-cytometry","flow-cytometry-analysis","flow-cytometry-data","flow-cytometry-files","ifc","image","imaging-flow-cytometry","imaging-flow-cytometry-data","microscopy","r"],"latest_commit_sha":null,"homepage":"","language":"R","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"gpl-3.0","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/gitdemont.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE.md","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null}},"created_at":"2020-03-24T21:09:03.000Z","updated_at":"2024-04-15T15:24:39.633Z","dependencies_parsed_at":"2024-04-15T15:34:48.086Z","dependency_job_id":null,"html_url":"https://github.com/gitdemont/IFC","commit_stats":{"total_commits":873,"total_committers":3,"mean_commits":291.0,"dds":0.06872852233676974,"last_synced_commit":"763e1cdd6d22b031464008124ba1ed14ba31247a"},"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/gitdemont%2FIFC","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/gitdemont%2FIFC/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/gitdemont%2FIFC/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/gitdemont%2FIFC/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/gitdemont","download_url":"https://codeload.github.com/gitdemont/IFC/tar.gz/refs/heads/master","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":214635252,"owners_count":15762116,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"},"tags":[]},"repo_metadata_updated_at":"2024-08-09T08:05:18.155Z","dependent_packages_count":0,"downloads":240,"downloads_period":"last-month","dependent_repos_count":2,"rankings":{"downloads":36.6619368570415,"dependent_repos_count":19.1652621307549,"dependent_packages_count":28.667760968901113,"stargazers_count":23.560720305153907,"forks_count":20.97933114521423,"docker_downloads_count":null,"average":25.807002281413133},"purl":"pkg:cran/IFC","advisories":[],"docker_usage_url":"https://docker.ecosyste.ms/usage/cran/IFC","docker_dependents_count":null,"docker_downloads_count":null,"usage_url":"https://repos.ecosyste.ms/usage/cran/IFC","dependent_repositories_url":"https://repos.ecosyste.ms/api/v1/usage/cran/IFC/dependencies","status":null,"funding_links":[],"critical":null,"issue_metadata":{"last_synced_at":"2024-07-08T04:55:30.819Z","issues_count":5,"pull_requests_count":1,"avg_time_to_close_issue":2983748.0,"avg_time_to_close_pull_request":331735.0,"issues_closed_count":2,"pull_requests_closed_count":1,"pull_request_authors_count":1,"issue_authors_count":5,"avg_comments_per_issue":7.0,"avg_comments_per_pull_request":2.0,"merged_pull_requests_count":1,"bot_issues_count":0,"bot_pull_requests_count":0,"past_year_issues_count":4,"past_year_pull_requests_count":0,"past_year_avg_time_to_close_issue":2983748.0,"past_year_avg_time_to_close_pull_request":null,"past_year_issues_closed_count":2,"past_year_pull_requests_closed_count":0,"past_year_pull_request_authors_count":0,"past_year_issue_authors_count":4,"past_year_avg_comments_per_issue":8.5,"past_year_avg_comments_per_pull_request":null,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":0,"issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/gitdemont%2FIFC/issues","maintainers":[{"login":"gitdemont","count":1,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/gitdemont"}],"active_maintainers":[{"login":"gitdemont","count":1,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/gitdemont"}]},"versions_url":"https://packages.ecosyste.ms/api/v1/registries/cran.r-project.org/packages/IFC/versions","version_numbers_url":"https://packages.ecosyste.ms/api/v1/registries/cran.r-project.org/packages/IFC/version_numbers","dependent_packages_url":"https://packages.ecosyste.ms/api/v1/registries/cran.r-project.org/packages/IFC/dependent_packages","related_packages_url":"https://packages.ecosyste.ms/api/v1/registries/cran.r-project.org/packages/IFC/related_packages","maintainers":[{"uuid":"git.demont@gmail.com","login":null,"name":"Yohann Demont","email":"git.demont@gmail.com","url":null,"packages_count":1,"html_url":null,"role":null,"created_at":"2022-11-14T17:17:22.381Z","updated_at":"2022-11-14T17:17:22.381Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/cran.r-project.org/maintainers/git.demont@gmail.com/packages"}],"registry":{"name":"cran.r-project.org","url":"https://cran.r-project.org","ecosystem":"cran","default":true,"packages_count":26181,"maintainers_count":14299,"namespaces_count":0,"keywords_count":8326,"github":"r-project-org","metadata":{"funded_packages_count":539},"icon_url":"https://github.com/r-project-org.png","created_at":"2022-04-06T16:32:25.637Z","updated_at":"2025-09-08T06:54:01.855Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/cran.r-project.org/packages","maintainers_url":"https://packages.ecosyste.ms/api/v1/registries/cran.r-project.org/maintainers","namespaces_url":"https://packages.ecosyste.ms/api/v1/registries/cran.r-project.org/namespaces"}}],"commits":{"id":721789,"full_name":"gitdemont/IFC","default_branch":"master","committers":[{"name":"unknown","email":"git.demont@gmail.com","login":null,"count":813},{"name":"unknown","email":"gitdemont@gmail.com","login":null,"count":59},{"name":"Dirk Eddelbuettel","email":"edd@debian.org","login":"eddelbuettel","count":1}],"total_commits":873,"total_committers":3,"total_bot_commits":0,"total_bot_committers":0,"mean_commits":291.0,"dds":0.06872852233676974,"past_year_committers":[{"name":"unknown","email":"git.demont@gmail.com","login":null,"count":49}],"past_year_total_commits":49,"past_year_total_committers":1,"past_year_total_bot_commits":0,"past_year_total_bot_committers":0,"past_year_mean_commits":49.0,"past_year_dds":0.0,"last_synced_at":"2023-10-25T13:36:01.465Z","last_synced_commit":"763e1cdd6d22b031464008124ba1ed14ba31247a","created_at":"2023-03-09T13:05:22.397Z","updated_at":"2023-10-25T13:36:01.466Z","commits_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories/gitdemont%2FIFC/commits","host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-07T00:00:09.744Z","repositories_count":5480019,"commits_count":853389126,"contributors_count":31098155,"owners_count":906558,"icon_url":"https://github.com/github.png","host_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories"}},"issues_stats":{"full_name":"gitdemont/IFC","html_url":"https://github.com/gitdemont/IFC","last_synced_at":"2025-03-18T13:51:43.137Z","status":null,"issues_count":5,"pull_requests_count":1,"avg_time_to_close_issue":2983748.0,"avg_time_to_close_pull_request":331735.0,"issues_closed_count":2,"pull_requests_closed_count":1,"pull_request_authors_count":1,"issue_authors_count":5,"avg_comments_per_issue":7.0,"avg_comments_per_pull_request":2.0,"merged_pull_requests_count":1,"bot_issues_count":0,"bot_pull_requests_count":0,"past_year_issues_count":2,"past_year_pull_requests_count":0,"past_year_avg_time_to_close_issue":4408033.0,"past_year_avg_time_to_close_pull_request":null,"past_year_issues_closed_count":1,"past_year_pull_requests_closed_count":0,"past_year_pull_request_authors_count":0,"past_year_issue_authors_count":2,"past_year_avg_comments_per_issue":8.5,"past_year_avg_comments_per_pull_request":null,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":0,"created_at":"2023-05-10T22:29:32.838Z","updated_at":"2025-09-01T17:22:27.983Z","repository_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/gitdemont%2FIFC","issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/gitdemont%2FIFC/issues","issue_labels_count":{},"pull_request_labels_count":{},"issue_author_associations_count":{"NONE":4,"OWNER":1},"pull_request_author_associations_count":{"CONTRIBUTOR":1},"issue_authors":{"wooksh":1,"gitdemont":1,"alefrol638":1,"rmassei":1,"bavanesyan":1},"pull_request_authors":{"eddelbuettel":1},"host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-06T00:00:15.144Z","repositories_count":10122615,"issues_count":31721744,"pull_requests_count":98828394,"authors_count":10710967,"icon_url":"https://github.com/github.png","host_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories","owners_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/owners","authors_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors"},"past_year_issue_labels_count":{},"past_year_pull_request_labels_count":{},"past_year_issue_author_associations_count":{},"past_year_pull_request_author_associations_count":{},"past_year_issue_authors":{},"past_year_pull_request_authors":{},"maintainers":[{"login":"gitdemont","count":1,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/gitdemont"}],"active_maintainers":[]},"events":{"total":{"WatchEvent":1,"PushEvent":24,"CreateEvent":1},"last_year":{"WatchEvent":1,"PushEvent":24,"CreateEvent":1}},"keywords":["cytometry","cytometry-data","flow","flow-cytometry","flow-cytometry-analysis","flow-cytometry-data","flow-cytometry-files","ifc","image","imaging-flow-cytometry","imaging-flow-cytometry-data","microscopy","r"],"dependencies":[{"ecosystem":"cran","filepath":"DESCRIPTION","sha":null,"kind":"manifest","created_at":"2022-09-06T08:10:35.964Z","updated_at":"2022-09-06T08:10:35.964Z","repository_link":"https://github.com/gitdemont/IFC/blob/master/DESCRIPTION","dependencies":[{"id":3990546030,"package_name":"R","ecosystem":"cran","requirements":"\u003e= 3.4.0","direct":true,"kind":"depends","optional":false},{"id":3990546031,"package_name":"Rcpp","ecosystem":"cran","requirements":"\u003e= 0.10.0","direct":true,"kind":"imports","optional":false},{"id":3990546032,"package_name":"RcppProgress","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":3990546033,"package_name":"xml2","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":3990546034,"package_name":"png","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":3990546035,"package_name":"tiff","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":3990546036,"package_name":"jpeg","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":3990546037,"package_name":"utils","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":3990546038,"package_name":"grid","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":3990546039,"package_name":"gridExtra","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":3990546040,"package_name":"lattice","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":3990546041,"package_name":"latticeExtra","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":3990546042,"package_name":"KernSmooth","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":3990546043,"package_name":"DT","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":3990546044,"package_name":"visNetwork","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":3990546045,"package_name":"IFCdata","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":3990546046,"package_name":"shiny","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":3990546047,"package_name":"reticulate","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false}]},{"ecosystem":"actions","filepath":".github/workflows/R-CMD-check.yaml","sha":null,"kind":"manifest","created_at":"2023-02-17T07:15:38.092Z","updated_at":"2023-02-17T07:15:38.092Z","repository_link":"https://github.com/gitdemont/IFC/blob/master/.github/workflows/R-CMD-check.yaml","dependencies":[{"id":7735638062,"package_name":"actions/checkout","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":7735638063,"package_name":"r-lib/actions/setup-r","ecosystem":"actions","requirements":"v1","direct":true,"kind":"composite","optional":false},{"id":7735638064,"package_name":"r-lib/actions/setup-pandoc","ecosystem":"actions","requirements":"v1","direct":true,"kind":"composite","optional":false},{"id":7735638065,"package_name":"actions/cache","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":7735638066,"package_name":"actions/upload-artifact","ecosystem":"actions","requirements":"main","direct":true,"kind":"composite","optional":false}]},{"ecosystem":"actions","filepath":".github/workflows/deploy-cran-repo.yml","sha":null,"kind":"manifest","created_at":"2025-06-12T09:38:11.763Z","updated_at":"2025-06-12T09:38:11.763Z","repository_link":"https://github.com/gitdemont/IFC/blob/master/.github/workflows/deploy-cran-repo.yml","dependencies":[{"id":23581950011,"package_name":"actions/checkout","ecosystem":"actions","requirements":"v4","direct":true,"kind":"composite","optional":false},{"id":23581950012,"package_name":"./.actions/build-rwasm","ecosystem":"actions","requirements":"*","direct":true,"kind":"composite","optional":false},{"id":23581950013,"package_name":"actions/upload-pages-artifact","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":23581950014,"package_name":"actions/deploy-pages","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false}]}],"score":8.671115273688494,"created_at":"2025-09-08T11:18:25.978Z","updated_at":"2025-10-07T08:24:22.587Z","avatar_url":"https://github.com/gitdemont.png","language":"R","category":null,"sub_category":null,"monthly_downloads":240,"funding_links":[],"readme_doi_urls":[],"works":{},"citation_counts":{},"total_citations":0,"keywords_from_contributors":[],"project_url":"https://science.ecosyste.ms/api/v1/projects/62552","html_url":"https://science.ecosyste.ms/projects/62552"}