{"id":63433,"name":"bigraph","description":"Bipartite-network link prediction in Python","url":"https://github.com/bi-graph/bigraph","last_synced_at":"2025-09-08T12:57:33.382Z","repository":{"id":43659662,"uuid":"216279002","full_name":"bi-graph/Bigraph","owner":"bi-graph","description":"Bipartite-network link prediction in Python","archived":false,"fork":false,"pushed_at":"2022-05-22T19:11:02.000Z","size":6422,"stargazers_count":84,"open_issues_count":6,"forks_count":21,"subscribers_count":2,"default_branch":"master","last_synced_at":"2023-11-20T10:20:50.065Z","etag":null,"topics":["bigraph","bipartite-graphs","bipartite-link-prediction","deep-learning","deep-learning-algorithms","graph","graph-algorithms","graph-analysis","graph-link-prediction","graph-neural-network","graph-neural-networks","link-prediction","machine-learning","python"],"latest_commit_sha":null,"homepage":"https://bigraph.readthedocs.io/en/latest/index.html","language":"Python","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"other","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/bi-graph.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"License.txt","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null}},"created_at":"2019-10-19T22:38:19.000Z","updated_at":"2023-11-20T10:20:50.066Z","dependencies_parsed_at":"2022-08-23T04:20:34.692Z","dependency_job_id":null,"html_url":"https://github.com/bi-graph/Bigraph","commit_stats":null,"previous_names":[],"tags_count":1,"template":null,"template_full_name":null,"purl":"pkg:github/bi-graph/Bigraph","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/bi-graph%2FBigraph","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/bi-graph%2FBigraph/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/bi-graph%2FBigraph/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/bi-graph%2FBigraph/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/bi-graph","download_url":"https://codeload.github.com/bi-graph/Bigraph/tar.gz/refs/heads/master","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/bi-graph%2FBigraph/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":274188916,"owners_count":25237853,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-09-08T02:00:09.813Z","response_time":121,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"owner":{"login":"bi-graph","name":"BiGraph","uuid":"77182416","kind":"organization","description":"Graph analysis libraries","email":null,"website":null,"location":null,"twitter":null,"company":null,"icon_url":"https://avatars.githubusercontent.com/u/77182416?v=4","repositories_count":2,"last_synced_at":"2023-03-11T02:27:40.661Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/bi-graph","funding_links":[],"total_stars":null,"followers":null,"following":null,"created_at":"2023-02-14T23:33:02.868Z","updated_at":"2023-03-11T02:27:40.668Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/bi-graph","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/bi-graph/repositories"},"packages":[{"id":2655412,"name":"bigraph","ecosystem":"pypi","description":"Python package for link prediction in bipartite graphs and networks","homepage":"https://github.com/bi-graph/bigraph","licenses":"BSD License","normalized_licenses":["BSD-3-Clause"],"repository_url":"https://github.com/bi-graph/bigraph","keywords_array":["Networks","Graph Theory","Mathematics","network","graph","bipartite graph","bigraph","link prediction","discrete mathematics","math"],"namespace":null,"versions_count":3,"first_release_published_at":"2021-01-10T17:23:29.000Z","latest_release_published_at":"2021-01-11T18:46:21.000Z","latest_release_number":"0.1rc7","last_synced_at":"2025-08-14T00:33:58.243Z","created_at":"2022-04-10T10:11:43.124Z","updated_at":"2025-08-14T00:33:58.244Z","registry_url":"https://pypi.org/project/bigraph/","install_command":"pip install bigraph --index-url https://pypi.org/simple","documentation_url":"https://bigraph.readthedocs.io/","metadata":{"funding":null,"documentation":null,"classifiers":["Development Status :: 4 - Beta","Intended Audience :: Developers","Intended Audience :: Science/Research","License :: OSI Approved :: BSD License","Operating System :: OS Independent","Programming Language :: Python :: 3","Programming Language :: Python :: 3.6","Programming Language :: Python :: 3.7","Programming Language :: Python :: 3.8","Topic :: Scientific/Engineering :: Bio-Informatics","Topic :: Scientific/Engineering :: Information Analysis","Topic :: Scientific/Engineering :: Mathematics","Topic :: Scientific/Engineering :: Physics","Topic :: Software Development :: Libraries :: Python Modules"],"normalized_name":"bigraph"},"repo_metadata":{"uuid":"216279002","full_name":"bi-graph/Bigraph","owner":"bi-graph","description":"Bipartite-network link prediction in Python","archived":false,"fork":false,"pushed_at":"2022-05-22T19:11:02.000Z","size":6422,"stargazers_count":84,"open_issues_count":6,"forks_count":20,"subscribers_count":2,"default_branch":"master","last_synced_at":"2023-10-25T13:53:30.109Z","etag":null,"topics":["bigraph","bipartite-graphs","bipartite-link-prediction","deep-learning","deep-learning-algorithms","graph","graph-algorithms","graph-analysis","graph-link-prediction","graph-neural-network","graph-neural-networks","link-prediction","machine-learning","python"],"latest_commit_sha":null,"homepage":"https://bigraph.readthedocs.io/en/latest/index.html","language":"Python","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"other","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/bi-graph.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"License.txt","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null}},"created_at":"2019-10-19T22:38:19.000Z","updated_at":"2023-10-12T13:31:52.000Z","dependencies_parsed_at":"2022-08-23T04:20:34.692Z","dependency_job_id":null,"html_url":"https://github.com/bi-graph/Bigraph","commit_stats":null,"previous_names":[],"tags_count":1,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/bi-graph%2FBigraph","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/bi-graph%2FBigraph/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/bi-graph%2FBigraph/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/bi-graph%2FBigraph/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/bi-graph","download_url":"https://codeload.github.com/bi-graph/Bigraph/tar.gz/refs/heads/master","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":172188380,"owners_count":9793176,"icon_url":"https://github.com/github.png","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"},"owner_record":{"login":"bi-graph","name":"BiGraph","uuid":"77182416","kind":"organization","description":"Graph analysis libraries","email":null,"website":null,"location":null,"twitter":null,"company":null,"icon_url":"https://avatars.githubusercontent.com/u/77182416?v=4","repositories_count":2,"last_synced_at":"2023-03-11T02:27:40.661Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/bi-graph","created_at":"2023-02-14T23:33:02.868Z","updated_at":"2023-03-11T02:27:40.668Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/bi-graph","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/bi-graph/repositories"},"tags":[{"name":"v0.1-alpha","sha":"afa3ec31cf8ba4559210b311f5599cb0d2b47dcb","kind":"commit","published_at":"2020-04-28T21:46:47.000Z","download_url":"https://codeload.github.com/bi-graph/Bigraph/tar.gz/v0.1-alpha","html_url":"https://github.com/bi-graph/Bigraph/releases/tag/v0.1-alpha","dependencies_parsed_at":null,"dependency_job_id":null,"tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/bi-graph%2FBigraph/tags/v0.1-alpha","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/bi-graph%2FBigraph/tags/v0.1-alpha/manifests"}]},"repo_metadata_updated_at":"2023-11-20T10:20:53.162Z","dependent_packages_count":0,"downloads":41,"downloads_period":"last-month","dependent_repos_count":0,"rankings":{"downloads":26.768094551721887,"dependent_repos_count":67.57737152727796,"dependent_packages_count":9.995259271770403,"stargazers_count":7.615245454737299,"forks_count":8.39158154942174,"docker_downloads_count":null,"average":24.069510470985858},"purl":"pkg:pypi/bigraph","advisories":[],"docker_usage_url":"https://docker.ecosyste.ms/usage/pypi/bigraph","docker_dependents_count":null,"docker_downloads_count":null,"usage_url":"https://repos.ecosyste.ms/usage/pypi/bigraph","dependent_repositories_url":"https://repos.ecosyste.ms/api/v1/usage/pypi/bigraph/dependencies","status":null,"funding_links":[],"critical":null,"issue_metadata":{"last_synced_at":"2023-11-20T10:20:52.102Z","issues_count":7,"pull_requests_count":6,"avg_time_to_close_issue":11820.0,"avg_time_to_close_pull_request":17605.0,"issues_closed_count":1,"pull_requests_closed_count":6,"pull_request_authors_count":3,"issue_authors_count":3,"avg_comments_per_issue":0.2857142857142857,"avg_comments_per_pull_request":0.5,"merged_pull_requests_count":3,"bot_issues_count":0,"bot_pull_requests_count":3,"past_year_issues_count":0,"past_year_pull_requests_count":0,"past_year_avg_time_to_close_issue":null,"past_year_avg_time_to_close_pull_request":null,"past_year_issues_closed_count":0,"past_year_pull_requests_closed_count":0,"past_year_pull_request_authors_count":0,"past_year_issue_authors_count":0,"past_year_avg_comments_per_issue":null,"past_year_avg_comments_per_pull_request":null,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":0},"versions_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/packages/bigraph/versions","version_numbers_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/packages/bigraph/version_numbers","dependent_packages_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/packages/bigraph/dependent_packages","related_packages_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/packages/bigraph/related_packages","maintainers":[{"uuid":"soran","login":"soran","name":null,"email":null,"url":null,"packages_count":7,"html_url":"https://pypi.org/user/soran/","role":null,"created_at":"2023-02-23T17:12:39.454Z","updated_at":"2023-02-23T17:12:39.454Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/maintainers/soran/packages"},{"uuid":"taleb.zarhesh","login":"taleb.zarhesh","name":null,"email":null,"url":null,"packages_count":5,"html_url":"https://pypi.org/user/taleb.zarhesh/","role":null,"created_at":"2023-02-23T17:12:39.458Z","updated_at":"2023-02-23T17:12:39.458Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/maintainers/taleb.zarhesh/packages"}],"registry":{"name":"pypi.org","url":"https://pypi.org","ecosystem":"pypi","default":true,"packages_count":726136,"maintainers_count":308800,"namespaces_count":0,"keywords_count":238245,"github":"pypi","metadata":{"funded_packages_count":50579},"icon_url":"https://github.com/pypi.png","created_at":"2022-04-04T15:19:23.364Z","updated_at":"2025-09-08T05:32:36.857Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/packages","maintainers_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/maintainers","namespaces_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/namespaces"}}],"commits":{"id":542606,"full_name":"bi-graph/Bigraph","default_branch":"master","committers":[{"name":"Soran","email":"soran.gdr.cs@gmail.com","login":null,"count":312},{"name":"Soran Qadri","email":"kpg.kurd@gmail.com","login":null,"count":29},{"name":"sigma1326","email":"taleb.zarhesh@gmail.com","login":null,"count":8},{"name":"The Codacy Badger","email":"badger@codacy.com","login":"codacy-badger","count":1}],"total_commits":350,"total_committers":4,"total_bot_commits":0,"total_bot_committers":0,"mean_commits":87.5,"dds":0.10857142857142854,"past_year_committers":[],"past_year_total_commits":0,"past_year_total_committers":0,"past_year_total_bot_commits":0,"past_year_total_bot_committers":0,"past_year_mean_commits":0.0,"past_year_dds":0.0,"last_synced_at":"2023-10-25T13:53:41.477Z","last_synced_commit":"f41772af581b133d0104af31929261afcc2cde49","created_at":"2023-03-09T04:17:06.558Z","updated_at":"2023-10-25T13:53:41.477Z","commits_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories/bi-graph%2FBigraph/commits","host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-08T00:00:16.827Z","repositories_count":5483322,"commits_count":854270774,"contributors_count":31138750,"owners_count":908526,"icon_url":"https://github.com/github.png","host_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories"}},"issues_stats":{"full_name":"bi-graph/Bigraph","html_url":"https://github.com/bi-graph/Bigraph","last_synced_at":"2023-11-20T10:20:52.102Z","status":null,"issues_count":7,"pull_requests_count":6,"avg_time_to_close_issue":11820.0,"avg_time_to_close_pull_request":17605.0,"issues_closed_count":1,"pull_requests_closed_count":6,"pull_request_authors_count":3,"issue_authors_count":3,"avg_comments_per_issue":0.2857142857142857,"avg_comments_per_pull_request":0.5,"merged_pull_requests_count":3,"bot_issues_count":0,"bot_pull_requests_count":3,"past_year_issues_count":0,"past_year_pull_requests_count":0,"past_year_avg_time_to_close_issue":null,"past_year_avg_time_to_close_pull_request":null,"past_year_issues_closed_count":0,"past_year_pull_requests_closed_count":0,"past_year_pull_request_authors_count":0,"past_year_issue_authors_count":0,"past_year_avg_comments_per_issue":null,"past_year_avg_comments_per_pull_request":null,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":0,"created_at":"2023-05-14T09:46:49.409Z","updated_at":"2023-11-20T10:20:52.103Z","repository_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/bi-graph%2FBigraph","issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/bi-graph%2FBigraph/issues","issue_labels_count":{},"pull_request_labels_count":{"dependencies":3},"issue_author_associations_count":{"MEMBER":5,"NONE":2},"pull_request_author_associations_count":{"NONE":3,"MEMBER":2,"CONTRIBUTOR":1},"issue_authors":{"soran-ghaderi":5,"erlebach":1,"stonemasonSantiago":1},"pull_request_authors":{"dependabot[bot]":3,"sigma1326":2,"codacy-badger":1},"host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-08T00:00:17.013Z","repositories_count":10165784,"issues_count":31999265,"pull_requests_count":100269215,"authors_count":10729006,"icon_url":"https://github.com/github.png","host_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories","owners_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/owners","authors_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors"},"past_year_issue_labels_count":{},"past_year_pull_request_labels_count":{},"past_year_issue_author_associations_count":{},"past_year_pull_request_author_associations_count":{},"past_year_issue_authors":{},"past_year_pull_request_authors":{},"maintainers":[{"login":"soran-ghaderi","count":5,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/soran-ghaderi"},{"login":"sigma1326","count":2,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/sigma1326"}],"active_maintainers":[]},"events":{"total":{"WatchEvent":4},"last_year":{"WatchEvent":4}},"keywords":["bigraph","bipartite-graphs","bipartite-link-prediction","deep-learning","deep-learning-algorithms","graph","graph-algorithms","graph-analysis","graph-link-prediction","graph-neural-network","graph-neural-networks","link-prediction","machine-learning","python"],"dependencies":[{"ecosystem":"pypi","filepath":"pyproject.toml","sha":null,"kind":"manifest","created_at":"2022-08-23T04:20:33.618Z","updated_at":"2022-08-23T04:20:33.618Z","repository_link":"https://github.com/bi-graph/Bigraph/blob/master/pyproject.toml","dependencies":[{"id":2342636161,"package_name":"python","ecosystem":"pypi","requirements":"\u003e=3.10,\u003c3.11","direct":true,"kind":"runtime","optional":false},{"id":2342636162,"package_name":"networkx","ecosystem":"pypi","requirements":"^2.6.3","direct":true,"kind":"runtime","optional":false},{"id":2342636163,"package_name":"tabulate","ecosystem":"pypi","requirements":"^0.8.9","direct":true,"kind":"runtime","optional":false},{"id":2342636164,"package_name":"pandas","ecosystem":"pypi","requirements":"^1.4.1","direct":true,"kind":"runtime","optional":false},{"id":2342636165,"package_name":"scipy","ecosystem":"pypi","requirements":"^1.8.1","direct":true,"kind":"runtime","optional":false},{"id":2342636166,"package_name":"matplotlib","ecosystem":"pypi","requirements":"^3.5.2","direct":true,"kind":"runtime","optional":false},{"id":2342636167,"package_name":"scikit-learn","ecosystem":"pypi","requirements":"^1.1.1","direct":true,"kind":"runtime","optional":false},{"id":2342636168,"package_name":"numpy","ecosystem":"pypi","requirements":"^1.22.4","direct":true,"kind":"runtime","optional":false},{"id":2342636169,"package_name":"Pygments","ecosystem":"pypi","requirements":"^2.12.0","direct":true,"kind":"runtime","optional":false}]},{"ecosystem":"pypi","filepath":"requirements/default.txt","sha":null,"kind":"manifest","created_at":"2022-08-23T04:20:33.714Z","updated_at":"2022-08-23T04:20:33.714Z","repository_link":"https://github.com/bi-graph/Bigraph/blob/master/requirements/default.txt","dependencies":[{"id":2342638434,"package_name":"matplotlib","ecosystem":"pypi","requirements":"\u003e=3.2.0","direct":true,"kind":"runtime","optional":false},{"id":2342638435,"package_name":"networkx","ecosystem":"pypi","requirements":"\u003e=2.4","direct":true,"kind":"runtime","optional":false},{"id":2342638436,"package_name":"numpy","ecosystem":"pypi","requirements":"\u003e=1.17.4","direct":true,"kind":"runtime","optional":false},{"id":2342638437,"package_name":"pandas","ecosystem":"pypi","requirements":"\u003e=0.25.2","direct":true,"kind":"runtime","optional":false},{"id":2342638438,"package_name":"scikit-learn","ecosystem":"pypi","requirements":"\u003e=0.24.2","direct":true,"kind":"runtime","optional":false},{"id":2342638439,"package_name":"tabulate","ecosystem":"pypi","requirements":"\u003e=0.8.7","direct":true,"kind":"runtime","optional":false},{"id":2342638440,"package_name":"setuptools","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false}]},{"ecosystem":"pypi","filepath":"requirements/developer.txt","sha":null,"kind":"manifest","created_at":"2022-08-23T04:20:34.028Z","updated_at":"2022-08-23T04:20:34.028Z","repository_link":"https://github.com/bi-graph/Bigraph/blob/master/requirements/developer.txt","dependencies":[{"id":2342641745,"package_name":"setuptools","ecosystem":"pypi","requirements":"*","direct":true,"kind":"development","optional":false}]},{"ecosystem":"pypi","filepath":"requirements.txt","sha":null,"kind":"manifest","created_at":"2022-08-23T04:20:34.573Z","updated_at":"2022-08-23T04:20:34.573Z","repository_link":"https://github.com/bi-graph/Bigraph/blob/master/requirements.txt","dependencies":[{"id":2342650148,"package_name":"bluepy","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false}]}],"score":9.647304147143718,"created_at":"2025-09-08T11:18:29.844Z","updated_at":"2025-10-07T08:24:33.725Z","avatar_url":"https://github.com/bi-graph.png","language":"Python","category":null,"sub_category":null,"monthly_downloads":41,"funding_links":[],"readme_doi_urls":["https://doi.org/10.1007/s10115-014-0789-0","https://doi.org/58.10.1002/asi.20591"],"works":{},"citation_counts":{},"total_citations":0,"keywords_from_contributors":[],"project_url":"https://science.ecosyste.ms/api/v1/projects/63433","html_url":"https://science.ecosyste.ms/projects/63433"}