{"id":66135,"name":"mmtf-python","description":"The python implementation of the MMTF API, decoder and encoder.","url":"https://github.com/rcsb/mmtf-python","last_synced_at":"2025-09-08T13:34:45.480Z","repository":{"id":41474495,"uuid":"56413074","full_name":"rcsb/mmtf-python","owner":"rcsb","description":"The python implementation of the MMTF API, decoder and encoder.","archived":false,"fork":false,"pushed_at":"2022-07-07T21:24:10.000Z","size":12947,"stargazers_count":46,"open_issues_count":3,"forks_count":25,"subscribers_count":11,"default_branch":"master","last_synced_at":"2025-08-17T00:58:31.809Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":"http://mmtf.rcsb.org/","language":"Python","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"apache-2.0","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/rcsb.png","metadata":{"files":{"readme":"README.md","changelog":"CHANGELOG.md","contributing":null,"funding":null,"license":"LICENSE.txt","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null}},"created_at":"2016-04-17T01:13:58.000Z","updated_at":"2024-05-24T18:44:31.000Z","dependencies_parsed_at":"2022-08-20T08:40:29.735Z","dependency_job_id":null,"html_url":"https://github.com/rcsb/mmtf-python","commit_stats":null,"previous_names":[],"tags_count":11,"template":false,"template_full_name":null,"purl":"pkg:github/rcsb/mmtf-python","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rcsb%2Fmmtf-python","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rcsb%2Fmmtf-python/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rcsb%2Fmmtf-python/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rcsb%2Fmmtf-python/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/rcsb","download_url":"https://codeload.github.com/rcsb/mmtf-python/tar.gz/refs/heads/master","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rcsb%2Fmmtf-python/sbom","scorecard":{"id":764742,"data":{"date":"2025-08-11","repo":{"name":"github.com/rcsb/mmtf-python","commit":"dc2181ec31809ae7212def6636e50fd49d222411"},"scorecard":{"version":"v5.2.1-40-gf6ed084d","commit":"f6ed084d17c9236477efd66e5b258b9d4cc7b389"},"score":2.4,"checks":[{"name":"Maintained","score":0,"reason":"0 commit(s) and 0 issue activity found in the last 90 days -- score normalized to 0","details":null,"documentation":{"short":"Determines if the project is \"actively maintained\".","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#maintained"}},{"name":"Code-Review","score":2,"reason":"Found 4/14 approved changesets -- score normalized to 2","details":null,"documentation":{"short":"Determines if the project requires human code review before pull requests (aka merge requests) are merged.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#code-review"}},{"name":"Packaging","score":-1,"reason":"packaging workflow not detected","details":["Warn: no GitHub/GitLab publishing workflow detected."],"documentation":{"short":"Determines if the project is published as a package that others can easily download, install, easily update, and uninstall.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#packaging"}},{"name":"Token-Permissions","score":-1,"reason":"No tokens found","details":null,"documentation":{"short":"Determines if the project's workflows follow the principle of least privilege.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#token-permissions"}},{"name":"Binary-Artifacts","score":10,"reason":"no binaries found in the repo","details":null,"documentation":{"short":"Determines if the project has generated executable (binary) artifacts in the source repository.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#binary-artifacts"}},{"name":"Dangerous-Workflow","score":-1,"reason":"no workflows found","details":null,"documentation":{"short":"Determines if the project's GitHub Action workflows avoid dangerous patterns.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#dangerous-workflow"}},{"name":"Pinned-Dependencies","score":-1,"reason":"no dependencies found","details":null,"documentation":{"short":"Determines if the project has declared and pinned the dependencies of its build process.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#pinned-dependencies"}},{"name":"CII-Best-Practices","score":0,"reason":"no effort to earn an OpenSSF best practices badge detected","details":null,"documentation":{"short":"Determines if the project has an OpenSSF (formerly CII) Best Practices Badge.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#cii-best-practices"}},{"name":"Security-Policy","score":0,"reason":"security policy file not detected","details":["Warn: no security policy file detected","Warn: no security file to analyze","Warn: no security file to analyze","Warn: no security file to analyze"],"documentation":{"short":"Determines if the project has published a security policy.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#security-policy"}},{"name":"Fuzzing","score":0,"reason":"project is not fuzzed","details":["Warn: no fuzzer integrations found"],"documentation":{"short":"Determines if the project uses fuzzing.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#fuzzing"}},{"name":"Signed-Releases","score":-1,"reason":"no releases found","details":null,"documentation":{"short":"Determines if the project cryptographically signs release artifacts.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#signed-releases"}},{"name":"License","score":10,"reason":"license file detected","details":["Info: project has a license file: LICENSE.txt:0","Info: FSF or OSI recognized license: Apache License 2.0: LICENSE.txt:0"],"documentation":{"short":"Determines if the project has defined a license.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#license"}},{"name":"Branch-Protection","score":0,"reason":"branch protection not enabled on development/release branches","details":["Warn: branch protection not enabled for branch 'master'"],"documentation":{"short":"Determines if the default and release branches are protected with GitHub's branch protection settings.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#branch-protection"}},{"name":"Vulnerabilities","score":3,"reason":"7 existing vulnerabilities detected","details":["Warn: Project is vulnerable to: PYSEC-2018-34 / GHSA-2fc2-6r4j-p65h","Warn: Project is vulnerable to: PYSEC-2021-856 / GHSA-5545-2q6w-2gh6","Warn: Project is vulnerable to: PYSEC-2019-108 / GHSA-9fq2-x9r6-wfmf","Warn: Project is vulnerable to: PYSEC-2018-33 / GHSA-cw6w-4rcx-xphc","Warn: Project is vulnerable to: PYSEC-2021-857 / GHSA-f7c7-j99h-c22f","Warn: Project is vulnerable to: GHSA-fpfv-jqm9-f5jm","Warn: Project is vulnerable to: PYSEC-2017-1 / GHSA-frgw-fgh6-9g52"],"documentation":{"short":"Determines if the project has open, known unfixed vulnerabilities.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#vulnerabilities"}},{"name":"SAST","score":0,"reason":"SAST tool is not run on all commits -- score normalized to 0","details":["Warn: 0 commits out of 26 are checked with a SAST tool"],"documentation":{"short":"Determines if the project uses static code analysis.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#sast"}}]},"last_synced_at":"2025-08-23T00:26:53.409Z","repository_id":41474495,"created_at":"2025-08-23T00:26:53.409Z","updated_at":"2025-08-23T00:26:53.409Z"},"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":274194138,"owners_count":25238979,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-09-08T02:00:09.813Z","response_time":121,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"owner":{"login":"rcsb","name":"RCSB PDB","uuid":"4259216","kind":"organization","description":"Github repository of the RCSB Protein Data Bank","email":null,"website":"http://www.rcsb.org","location":"United States","twitter":null,"company":null,"icon_url":"https://avatars.githubusercontent.com/u/4259216?v=4","repositories_count":112,"last_synced_at":"2024-04-16T01:13:04.878Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/rcsb","funding_links":[],"total_stars":428,"followers":83,"following":0,"created_at":"2022-11-04T13:47:48.568Z","updated_at":"2024-04-16T01:13:20.453Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/rcsb","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/rcsb/repositories"},"packages":[{"id":75692,"name":"py-mmtf-python","ecosystem":"spack","description":"The macromolecular transmission format (MMTF) is a binary encoding of\nbiological structures.\n","homepage":"https://github.com/rcsb/mmtf-python","licenses":"[]","normalized_licenses":["Other"],"repository_url":"https://github.com/rcsb/mmtf-python","keywords_array":[],"namespace":null,"versions_count":1,"first_release_published_at":"2022-04-05T09:26:08.607Z","latest_release_published_at":"2022-04-05T09:26:08.607Z","latest_release_number":"1.1.2","last_synced_at":"2025-08-26T14:48:11.028Z","created_at":"2022-04-05T09:26:08.580Z","updated_at":"2025-08-26T14:48:11.029Z","registry_url":"https://packages.spack.io/package.html?name=py-mmtf-python","install_command":"spack install py-mmtf-python","documentation_url":null,"metadata":{},"repo_metadata":{"uuid":"56413074","full_name":"rcsb/mmtf-python","owner":"rcsb","description":"The python implementation of the MMTF API, decoder and encoder.","archived":false,"fork":false,"pushed_at":"2022-07-07T21:24:10.000Z","size":12947,"stargazers_count":44,"open_issues_count":2,"forks_count":26,"subscribers_count":12,"default_branch":"master","last_synced_at":"2023-03-13T20:34:02.742Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":"http://mmtf.rcsb.org/","language":"Python","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"apache-2.0","status":null,"scm":"git","pull_requests_enabled":true,"logo_url":null,"metadata":{"files":{"readme":"README.md","changelog":"CHANGELOG.md","contributing":null,"funding":null,"license":"LICENSE.txt","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null}},"created_at":"2016-04-17T01:13:58.000Z","updated_at":"2023-02-21T20:46:40.000Z","dependencies_parsed_at":"2022-08-20T08:40:29.735Z","dependency_job_id":null,"html_url":"https://github.com/rcsb/mmtf-python","commit_stats":null,"repository_url":"http://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rcsb%2Fmmtf-python","tags_url":"http://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rcsb%2Fmmtf-python/tags","manifests_url":"http://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rcsb%2Fmmtf-python/manifests","owner_url":"http://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/rcsb","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":108921946,"host_url":"http://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"http://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"http://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names"},"owner_record":{"login":"rcsb","name":"RCSB PDB","uuid":"4259216","kind":"organization","description":"Github repository of the RCSB Protein Data Bank","email":null,"website":"http://www.rcsb.org","location":"United States","twitter":null,"company":null,"avatar_url":"https://avatars.githubusercontent.com/u/4259216?v=4","repositories_count":56,"last_synced_at":"2023-02-18T11:10:59.527Z","metadata":{"has_sponsors_listing":false},"owner_url":"http://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/rcsb"},"tags":[{"name":"v1.1.3","sha":"dc2181ec31809ae7212def6636e50fd49d222411","kind":"commit","published_at":"2022-07-06T02:43:51.000Z","download_url":"https://codeload.github.com/rcsb/mmtf-python/tar.gz/v1.1.3","html_url":"https://github.com/rcsb/mmtf-python/releases/tag/v1.1.3"},{"name":"v1.1.2","sha":"7fc851a692a4fc3916accf42866e870fb2120666","kind":"commit","published_at":"2018-05-21T18:43:31.000Z","download_url":"https://codeload.github.com/rcsb/mmtf-python/tar.gz/v1.1.2","html_url":"https://github.com/rcsb/mmtf-python/releases/tag/v1.1.2"},{"name":"v1.1.0","sha":"8328fbf5fc7eff50bf6b722c623f2bbfd326e6cc","kind":"tag","published_at":"2018-04-04T07:23:30.000Z","download_url":"https://codeload.github.com/rcsb/mmtf-python/tar.gz/v1.1.0","html_url":"https://github.com/rcsb/mmtf-python/releases/tag/v1.1.0"},{"name":"v1.0.12","sha":"ce79c2f75c846bfaf150c9f2635e377b712dd578","kind":"tag","published_at":"2018-02-26T20:24:23.000Z","download_url":"https://codeload.github.com/rcsb/mmtf-python/tar.gz/v1.0.12","html_url":"https://github.com/rcsb/mmtf-python/releases/tag/v1.0.12"},{"name":"v1.0.11","sha":"dc236848f1d21a5b94e113c7dccb5358145e78b7","kind":"commit","published_at":"2018-02-26T20:09:25.000Z","download_url":"https://codeload.github.com/rcsb/mmtf-python/tar.gz/v1.0.11","html_url":"https://github.com/rcsb/mmtf-python/releases/tag/v1.0.11"},{"name":"v1.0.10","sha":"aa073429149f09e97ab7c98620c39c6dcb1678e0","kind":"commit","published_at":"2018-01-03T09:49:02.000Z","download_url":"https://codeload.github.com/rcsb/mmtf-python/tar.gz/v1.0.10","html_url":"https://github.com/rcsb/mmtf-python/releases/tag/v1.0.10"},{"name":"v1.0.7","sha":"2258e23ac2884cd159e133059d4ae8e5ce16107f","kind":"commit","published_at":"2017-06-28T19:48:05.000Z","download_url":"https://codeload.github.com/rcsb/mmtf-python/tar.gz/v1.0.7","html_url":"https://github.com/rcsb/mmtf-python/releases/tag/v1.0.7"},{"name":"v1.0.6","sha":"29e130b33a6cc85c33ae9ceebc4f0aaedf676a05","kind":"commit","published_at":"2017-06-02T17:56:10.000Z","download_url":"https://codeload.github.com/rcsb/mmtf-python/tar.gz/v1.0.6","html_url":"https://github.com/rcsb/mmtf-python/releases/tag/v1.0.6"},{"name":"v1.0.5","sha":"e36d4e229a9d183b93bea01c5fad49bec0d8909e","kind":"commit","published_at":"2016-11-24T13:05:27.000Z","download_url":"https://codeload.github.com/rcsb/mmtf-python/tar.gz/v1.0.5","html_url":"https://github.com/rcsb/mmtf-python/releases/tag/v1.0.5"},{"name":"v1.0.0","sha":"89eff1ff4db68b3fa2e95d00a2837f8d64ec226d","kind":"commit","published_at":"2016-08-15T23:30:06.000Z","download_url":"https://codeload.github.com/rcsb/mmtf-python/tar.gz/v1.0.0","html_url":"https://github.com/rcsb/mmtf-python/releases/tag/v1.0.0"},{"name":"v0.2.1","sha":"0d2e69a160f8c0cf9d537c5150c183d46039dbf0","kind":"commit","published_at":"2016-08-02T21:35:39.000Z","download_url":"https://codeload.github.com/rcsb/mmtf-python/tar.gz/v0.2.1","html_url":"https://github.com/rcsb/mmtf-python/releases/tag/v0.2.1"}]},"repo_metadata_updated_at":"2023-03-20T19:57:57.013Z","dependent_packages_count":1,"downloads":null,"downloads_period":null,"dependent_repos_count":0,"rankings":{"downloads":null,"dependent_repos_count":0.0,"dependent_packages_count":28.06725024315687,"stargazers_count":22.148117271085173,"forks_count":18.46602751146311,"average":17.17034875642629},"purl":"pkg:spack/py-mmtf-python","advisories":[],"docker_usage_url":"https://docker.ecosyste.ms/usage/spack/py-mmtf-python","docker_dependents_count":null,"docker_downloads_count":null,"usage_url":"https://repos.ecosyste.ms/usage/spack/py-mmtf-python","dependent_repositories_url":"https://repos.ecosyste.ms/api/v1/usage/spack/py-mmtf-python/dependencies","status":null,"funding_links":[],"critical":null,"issue_metadata":{"last_synced_at":"2023-08-08T21:22:46.390Z","issues_count":25,"pull_requests_count":36,"avg_time_to_close_issue":2017141.6956521738,"avg_time_to_close_pull_request":501332.5,"issues_closed_count":23,"pull_requests_closed_count":36,"pull_request_authors_count":11,"issue_authors_count":12,"avg_comments_per_issue":2.0,"avg_comments_per_pull_request":0.9722222222222222,"merged_pull_requests_count":35,"bot_issues_count":0,"bot_pull_requests_count":1,"past_year_issues_count":1,"past_year_pull_requests_count":0,"past_year_avg_time_to_close_issue":null,"past_year_avg_time_to_close_pull_request":null,"past_year_issues_closed_count":0,"past_year_pull_requests_closed_count":0,"past_year_pull_request_authors_count":0,"past_year_issue_authors_count":1,"past_year_avg_comments_per_issue":0.0,"past_year_avg_comments_per_pull_request":null,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":0},"versions_url":"https://packages.ecosyste.ms/api/v1/registries/spack.io/packages/py-mmtf-python/versions","version_numbers_url":"https://packages.ecosyste.ms/api/v1/registries/spack.io/packages/py-mmtf-python/version_numbers","dependent_packages_url":"https://packages.ecosyste.ms/api/v1/registries/spack.io/packages/py-mmtf-python/dependent_packages","related_packages_url":"https://packages.ecosyste.ms/api/v1/registries/spack.io/packages/py-mmtf-python/related_packages","maintainers":[{"uuid":"adamjstewart","login":"adamjstewart","name":null,"email":null,"url":"https://github.com/adamjstewart","packages_count":2170,"html_url":null,"role":null,"created_at":"2022-11-14T16:52:34.337Z","updated_at":"2022-11-14T16:52:34.337Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/spack.io/maintainers/adamjstewart/packages"}],"registry":{"name":"spack.io","url":"https://packages.spack.io","ecosystem":"spack","default":true,"packages_count":8772,"maintainers_count":926,"namespaces_count":0,"keywords_count":3681,"github":"spack","metadata":{"funded_packages_count":405},"icon_url":"https://github.com/spack.png","created_at":"2022-04-04T15:19:23.514Z","updated_at":"2025-09-08T06:56:36.288Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/spack.io/packages","maintainers_url":"https://packages.ecosyste.ms/api/v1/registries/spack.io/maintainers","namespaces_url":"https://packages.ecosyste.ms/api/v1/registries/spack.io/namespaces"}},{"id":8614680,"name":"github.com/rcsb/mmtf-python","ecosystem":"go","description":null,"homepage":null,"licenses":"apache-2.0","normalized_licenses":["Apache-2.0"],"repository_url":"https://github.com/rcsb/mmtf-python","keywords_array":[],"namespace":null,"versions_count":11,"first_release_published_at":"2023-12-02T02:15:00.004Z","latest_release_published_at":"2022-07-06T02:43:51.000Z","latest_release_number":"v1.1.3","last_synced_at":"2025-09-07T08:04:08.728Z","created_at":"2023-12-02T02:14:50.029Z","updated_at":"2025-09-07T08:04:08.728Z","registry_url":"https://pkg.go.dev/github.com/rcsb/mmtf-python","install_command":"go get github.com/rcsb/mmtf-python","documentation_url":"https://pkg.go.dev/github.com/rcsb/mmtf-python#section-documentation","metadata":{},"repo_metadata":{"uuid":"56413074","full_name":"rcsb/mmtf-python","owner":"rcsb","description":"The python implementation of the MMTF API, decoder and encoder.","archived":false,"fork":false,"pushed_at":"2022-07-07T21:24:10.000Z","size":12947,"stargazers_count":46,"open_issues_count":2,"forks_count":26,"subscribers_count":12,"default_branch":"master","last_synced_at":"2023-11-20T14:46:13.614Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":"http://mmtf.rcsb.org/","language":"Python","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"apache-2.0","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/rcsb.png","metadata":{"files":{"readme":"README.md","changelog":"CHANGELOG.md","contributing":null,"funding":null,"license":"LICENSE.txt","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null}},"created_at":"2016-04-17T01:13:58.000Z","updated_at":"2023-09-04T14:23:08.000Z","dependencies_parsed_at":"2022-08-20T08:40:29.735Z","dependency_job_id":null,"html_url":"https://github.com/rcsb/mmtf-python","commit_stats":null,"previous_names":[],"tags_count":11,"repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rcsb%2Fmmtf-python","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rcsb%2Fmmtf-python/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rcsb%2Fmmtf-python/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rcsb%2Fmmtf-python/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/rcsb","download_url":"https://codeload.github.com/rcsb/mmtf-python/tar.gz/refs/heads/master","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":174245444,"owners_count":10087783,"icon_url":"https://github.com/github.png","host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"repo_metadata_updated_at":"2023-12-02T02:14:58.832Z","dependent_packages_count":0,"downloads":null,"downloads_period":null,"dependent_repos_count":0,"rankings":{"downloads":null,"dependent_repos_count":10.801592556016239,"dependent_packages_count":9.575730298247606,"stargazers_count":6.062540460695754,"forks_count":4.405951088075822,"docker_downloads_count":null,"average":7.711453600758855},"purl":"pkg:golang/github.com/rcsb/mmtf-python","advisories":[],"docker_usage_url":"https://docker.ecosyste.ms/usage/go/github.com/rcsb/mmtf-python","docker_dependents_count":null,"docker_downloads_count":null,"usage_url":"https://repos.ecosyste.ms/usage/go/github.com/rcsb/mmtf-python","dependent_repositories_url":"https://repos.ecosyste.ms/api/v1/usage/go/github.com/rcsb/mmtf-python/dependencies","status":null,"funding_links":[],"critical":null,"issue_metadata":{"last_synced_at":"2023-11-20T14:43:34.641Z","issues_count":26,"pull_requests_count":36,"avg_time_to_close_issue":1936446.5416666667,"avg_time_to_close_pull_request":501332.5,"issues_closed_count":24,"pull_requests_closed_count":36,"pull_request_authors_count":11,"issue_authors_count":13,"avg_comments_per_issue":2.0384615384615383,"avg_comments_per_pull_request":0.9722222222222222,"merged_pull_requests_count":35,"bot_issues_count":0,"bot_pull_requests_count":1,"past_year_issues_count":1,"past_year_pull_requests_count":0,"past_year_avg_time_to_close_issue":80458.0,"past_year_avg_time_to_close_pull_request":null,"past_year_issues_closed_count":1,"past_year_pull_requests_closed_count":0,"past_year_pull_request_authors_count":0,"past_year_issue_authors_count":1,"past_year_avg_comments_per_issue":3.0,"past_year_avg_comments_per_pull_request":null,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":0,"issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/rcsb%2Fmmtf-python/issues"},"versions_url":"https://packages.ecosyste.ms/api/v1/registries/proxy.golang.org/packages/github.com%2Frcsb%2Fmmtf-python/versions","version_numbers_url":"https://packages.ecosyste.ms/api/v1/registries/proxy.golang.org/packages/github.com%2Frcsb%2Fmmtf-python/version_numbers","dependent_packages_url":"https://packages.ecosyste.ms/api/v1/registries/proxy.golang.org/packages/github.com%2Frcsb%2Fmmtf-python/dependent_packages","related_packages_url":"https://packages.ecosyste.ms/api/v1/registries/proxy.golang.org/packages/github.com%2Frcsb%2Fmmtf-python/related_packages","maintainers":[],"registry":{"name":"proxy.golang.org","url":"https://proxy.golang.org","ecosystem":"go","default":true,"packages_count":1954233,"maintainers_count":0,"namespaces_count":741771,"keywords_count":109320,"github":"golang","metadata":{"funded_packages_count":49342},"icon_url":"https://github.com/golang.png","created_at":"2022-04-04T15:19:22.939Z","updated_at":"2025-09-08T05:47:38.872Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/proxy.golang.org/packages","maintainers_url":"https://packages.ecosyste.ms/api/v1/registries/proxy.golang.org/maintainers","namespaces_url":"https://packages.ecosyste.ms/api/v1/registries/proxy.golang.org/namespaces"}},{"id":5289091,"name":"mmtf-python","ecosystem":"conda","description":"The macromolecular transmission format (MMTF) is a binary encoding of biological structures. This repository holds the Python 2 and 3 compatible API, encoding and decoding libraries.","homepage":"http://mmtf.rcsb.org","licenses":"Apache-2.0","normalized_licenses":["Apache-2.0"],"repository_url":"https://github.com/rcsb/mmtf-python","keywords_array":[],"namespace":null,"versions_count":9,"first_release_published_at":"2022-10-03T15:46:56.656Z","latest_release_published_at":"2022-07-06T08:16:05.000Z","latest_release_number":"1.1.3","last_synced_at":"2025-09-02T05:05:33.779Z","created_at":"2022-10-03T15:46:56.650Z","updated_at":"2025-09-02T05:05:33.779Z","registry_url":"https://anaconda.org/conda-forge/mmtf-python","install_command":"conda install -c conda-forge mmtf-python","documentation_url":null,"metadata":{},"repo_metadata":{"uuid":"56413074","full_name":"rcsb/mmtf-python","owner":"rcsb","description":"The python implementation of the MMTF API, decoder and encoder.","archived":false,"fork":false,"pushed_at":"2022-07-07T21:24:10.000Z","size":12947,"stargazers_count":45,"open_issues_count":2,"forks_count":26,"subscribers_count":12,"default_branch":"master","last_synced_at":"2023-03-21T11:14:39.385Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":"http://mmtf.rcsb.org/","language":"Python","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"apache-2.0","status":null,"scm":"git","pull_requests_enabled":true,"logo_url":null,"metadata":{"files":{"readme":"README.md","changelog":"CHANGELOG.md","contributing":null,"funding":null,"license":"LICENSE.txt","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null}},"created_at":"2016-04-17T01:13:58.000Z","updated_at":"2023-03-18T01:22:12.000Z","dependencies_parsed_at":"2022-08-20T08:40:29.735Z","dependency_job_id":null,"html_url":"https://github.com/rcsb/mmtf-python","commit_stats":null,"repository_url":"http://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rcsb%2Fmmtf-python","tags_url":"http://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rcsb%2Fmmtf-python/tags","manifests_url":"http://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rcsb%2Fmmtf-python/manifests","owner_url":"http://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/rcsb","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":108921946,"host_url":"http://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"http://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"http://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names"},"owner_record":{"login":"rcsb","name":"RCSB PDB","uuid":"4259216","kind":"organization","description":"Github repository of the RCSB Protein Data Bank","email":null,"website":"http://www.rcsb.org","location":"United States","twitter":null,"company":null,"avatar_url":"https://avatars.githubusercontent.com/u/4259216?v=4","repositories_count":56,"last_synced_at":"2023-02-18T11:10:59.527Z","metadata":{"has_sponsors_listing":false},"owner_url":"http://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/rcsb"},"tags":[{"name":"v1.1.3","sha":"dc2181ec31809ae7212def6636e50fd49d222411","kind":"commit","published_at":"2022-07-06T02:43:51.000Z","download_url":"https://codeload.github.com/rcsb/mmtf-python/tar.gz/v1.1.3","html_url":"https://github.com/rcsb/mmtf-python/releases/tag/v1.1.3"},{"name":"v1.1.2","sha":"7fc851a692a4fc3916accf42866e870fb2120666","kind":"commit","published_at":"2018-05-21T18:43:31.000Z","download_url":"https://codeload.github.com/rcsb/mmtf-python/tar.gz/v1.1.2","html_url":"https://github.com/rcsb/mmtf-python/releases/tag/v1.1.2"},{"name":"v1.1.0","sha":"8328fbf5fc7eff50bf6b722c623f2bbfd326e6cc","kind":"tag","published_at":"2018-04-04T07:23:30.000Z","download_url":"https://codeload.github.com/rcsb/mmtf-python/tar.gz/v1.1.0","html_url":"https://github.com/rcsb/mmtf-python/releases/tag/v1.1.0"},{"name":"v1.0.12","sha":"ce79c2f75c846bfaf150c9f2635e377b712dd578","kind":"tag","published_at":"2018-02-26T20:24:23.000Z","download_url":"https://codeload.github.com/rcsb/mmtf-python/tar.gz/v1.0.12","html_url":"https://github.com/rcsb/mmtf-python/releases/tag/v1.0.12"},{"name":"v1.0.11","sha":"dc236848f1d21a5b94e113c7dccb5358145e78b7","kind":"commit","published_at":"2018-02-26T20:09:25.000Z","download_url":"https://codeload.github.com/rcsb/mmtf-python/tar.gz/v1.0.11","html_url":"https://github.com/rcsb/mmtf-python/releases/tag/v1.0.11"},{"name":"v1.0.10","sha":"aa073429149f09e97ab7c98620c39c6dcb1678e0","kind":"commit","published_at":"2018-01-03T09:49:02.000Z","download_url":"https://codeload.github.com/rcsb/mmtf-python/tar.gz/v1.0.10","html_url":"https://github.com/rcsb/mmtf-python/releases/tag/v1.0.10"},{"name":"v1.0.7","sha":"2258e23ac2884cd159e133059d4ae8e5ce16107f","kind":"commit","published_at":"2017-06-28T19:48:05.000Z","download_url":"https://codeload.github.com/rcsb/mmtf-python/tar.gz/v1.0.7","html_url":"https://github.com/rcsb/mmtf-python/releases/tag/v1.0.7"},{"name":"v1.0.6","sha":"29e130b33a6cc85c33ae9ceebc4f0aaedf676a05","kind":"commit","published_at":"2017-06-02T17:56:10.000Z","download_url":"https://codeload.github.com/rcsb/mmtf-python/tar.gz/v1.0.6","html_url":"https://github.com/rcsb/mmtf-python/releases/tag/v1.0.6"},{"name":"v1.0.5","sha":"e36d4e229a9d183b93bea01c5fad49bec0d8909e","kind":"commit","published_at":"2016-11-24T13:05:27.000Z","download_url":"https://codeload.github.com/rcsb/mmtf-python/tar.gz/v1.0.5","html_url":"https://github.com/rcsb/mmtf-python/releases/tag/v1.0.5"},{"name":"v1.0.0","sha":"89eff1ff4db68b3fa2e95d00a2837f8d64ec226d","kind":"commit","published_at":"2016-08-15T23:30:06.000Z","download_url":"https://codeload.github.com/rcsb/mmtf-python/tar.gz/v1.0.0","html_url":"https://github.com/rcsb/mmtf-python/releases/tag/v1.0.0"},{"name":"v0.2.1","sha":"0d2e69a160f8c0cf9d537c5150c183d46039dbf0","kind":"commit","published_at":"2016-08-02T21:35:39.000Z","download_url":"https://codeload.github.com/rcsb/mmtf-python/tar.gz/v0.2.1","html_url":"https://github.com/rcsb/mmtf-python/releases/tag/v0.2.1"}]},"repo_metadata_updated_at":"2023-03-22T07:25:31.002Z","dependent_packages_count":2,"downloads":null,"downloads_period":null,"dependent_repos_count":16,"rankings":{"downloads":null,"dependent_repos_count":8.827785817655572,"dependent_packages_count":19.596786266779777,"stargazers_count":41.08488447527321,"forks_count":33.06053196267279,"docker_downloads_count":null,"average":25.642497130595338},"purl":"pkg:conda/mmtf-python","advisories":[],"docker_usage_url":"https://docker.ecosyste.ms/usage/conda/mmtf-python","docker_dependents_count":null,"docker_downloads_count":null,"usage_url":"https://repos.ecosyste.ms/usage/conda/mmtf-python","dependent_repositories_url":"https://repos.ecosyste.ms/api/v1/usage/conda/mmtf-python/dependencies","status":null,"funding_links":[],"critical":null,"issue_metadata":{"last_synced_at":"2023-08-08T21:22:46.390Z","issues_count":25,"pull_requests_count":36,"avg_time_to_close_issue":2017141.6956521738,"avg_time_to_close_pull_request":501332.5,"issues_closed_count":23,"pull_requests_closed_count":36,"pull_request_authors_count":11,"issue_authors_count":12,"avg_comments_per_issue":2.0,"avg_comments_per_pull_request":0.9722222222222222,"merged_pull_requests_count":35,"bot_issues_count":0,"bot_pull_requests_count":1,"past_year_issues_count":1,"past_year_pull_requests_count":0,"past_year_avg_time_to_close_issue":null,"past_year_avg_time_to_close_pull_request":null,"past_year_issues_closed_count":0,"past_year_pull_requests_closed_count":0,"past_year_pull_request_authors_count":0,"past_year_issue_authors_count":1,"past_year_avg_comments_per_issue":0.0,"past_year_avg_comments_per_pull_request":null,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":0},"versions_url":"https://packages.ecosyste.ms/api/v1/registries/conda-forge.org/packages/mmtf-python/versions","version_numbers_url":"https://packages.ecosyste.ms/api/v1/registries/conda-forge.org/packages/mmtf-python/version_numbers","dependent_packages_url":"https://packages.ecosyste.ms/api/v1/registries/conda-forge.org/packages/mmtf-python/dependent_packages","related_packages_url":"https://packages.ecosyste.ms/api/v1/registries/conda-forge.org/packages/mmtf-python/related_packages","maintainers":[],"registry":{"name":"conda-forge.org","url":"https://conda-forge.org","ecosystem":"conda","default":false,"packages_count":20636,"maintainers_count":0,"namespaces_count":0,"keywords_count":13414,"github":"conda-forge","metadata":{"kind":"conda-forge","key":"CondaForge","api":"https://conda.anaconda.org","funded_packages_count":2190},"icon_url":"https://github.com/conda-forge.png","created_at":"2022-10-03T15:37:08.743Z","updated_at":"2025-09-08T06:53:21.618Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/conda-forge.org/packages","maintainers_url":"https://packages.ecosyste.ms/api/v1/registries/conda-forge.org/maintainers","namespaces_url":"https://packages.ecosyste.ms/api/v1/registries/conda-forge.org/namespaces"}},{"id":2804968,"name":"mmtf-python","ecosystem":"pypi","description":"A decoding libary for the PDB mmtf format","homepage":"https://github.com/rcsb/mmtf-python.git","licenses":"Apache 2.0","normalized_licenses":["Apache-2.0"],"repository_url":"https://github.com/rcsb/mmtf-python","keywords_array":[],"namespace":null,"versions_count":27,"first_release_published_at":"2016-06-12T18:13:30.000Z","latest_release_published_at":"2022-07-06T03:06:23.000Z","latest_release_number":"1.1.3","last_synced_at":"2025-08-17T00:52:55.897Z","created_at":"2022-04-10T11:37:42.115Z","updated_at":"2025-08-17T00:58:31.923Z","registry_url":"https://pypi.org/project/mmtf-python/","install_command":"pip install mmtf-python --index-url https://pypi.org/simple","documentation_url":"https://mmtf-python.readthedocs.io/","metadata":{"funding":null,"documentation":null,"classifiers":["Development Status :: 5 - Production/Stable","Intended Audience :: Developers","License :: OSI Approved :: MIT License","Programming Language :: Python :: 2","Programming Language :: Python :: 2.6","Programming Language :: Python :: 2.7","Programming Language :: Python :: 3","Programming Language :: Python :: 3.2","Programming Language :: Python :: 3.3","Programming Language :: Python :: 3.4","Programming Language :: Python :: 3.5","Programming Language :: Python :: 3.6","Programming Language :: Python :: 3.7","Programming Language :: Python :: 3.8","Programming Language :: Python :: 3.9","Topic :: Software Development :: Build Tools"],"normalized_name":"mmtf-python","project_status":null},"repo_metadata":{"id":41474495,"uuid":"56413074","full_name":"rcsb/mmtf-python","owner":"rcsb","description":"The python implementation of the MMTF API, decoder and encoder.","archived":false,"fork":false,"pushed_at":"2022-07-07T21:24:10.000Z","size":12947,"stargazers_count":46,"open_issues_count":3,"forks_count":25,"subscribers_count":11,"default_branch":"master","last_synced_at":"2025-07-05T04:05:02.408Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":"http://mmtf.rcsb.org/","language":"Python","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"apache-2.0","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/rcsb.png","metadata":{"files":{"readme":"README.md","changelog":"CHANGELOG.md","contributing":null,"funding":null,"license":"LICENSE.txt","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null}},"created_at":"2016-04-17T01:13:58.000Z","updated_at":"2024-05-24T18:44:31.000Z","dependencies_parsed_at":"2022-08-20T08:40:29.735Z","dependency_job_id":null,"html_url":"https://github.com/rcsb/mmtf-python","commit_stats":null,"previous_names":[],"tags_count":11,"template":false,"template_full_name":null,"purl":"pkg:github/rcsb/mmtf-python","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rcsb%2Fmmtf-python","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rcsb%2Fmmtf-python/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rcsb%2Fmmtf-python/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rcsb%2Fmmtf-python/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/rcsb","download_url":"https://codeload.github.com/rcsb/mmtf-python/tar.gz/refs/heads/master","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rcsb%2Fmmtf-python/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":270791681,"owners_count":24645795,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-08-16T02:00:11.002Z","response_time":91,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"},"owner_record":{"login":"rcsb","name":"RCSB PDB","uuid":"4259216","kind":"organization","description":"Github repository of the RCSB Protein Data Bank","email":null,"website":"http://www.rcsb.org","location":"United States","twitter":null,"company":null,"icon_url":"https://avatars.githubusercontent.com/u/4259216?v=4","repositories_count":112,"last_synced_at":"2024-04-16T01:13:04.878Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/rcsb","funding_links":[],"total_stars":428,"followers":83,"following":0,"created_at":"2022-11-04T13:47:48.568Z","updated_at":"2024-04-16T01:13:20.453Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/rcsb","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/rcsb/repositories"},"tags":[{"name":"v1.1.3","sha":"dc2181ec31809ae7212def6636e50fd49d222411","kind":"commit","published_at":"2022-07-06T02:43:51.000Z","download_url":"https://codeload.github.com/rcsb/mmtf-python/tar.gz/v1.1.3","html_url":"https://github.com/rcsb/mmtf-python/releases/tag/v1.1.3","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/rcsb/mmtf-python@v1.1.3","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rcsb%2Fmmtf-python/tags/v1.1.3","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rcsb%2Fmmtf-python/tags/v1.1.3/manifests"},{"name":"v1.1.2","sha":"7fc851a692a4fc3916accf42866e870fb2120666","kind":"commit","published_at":"2018-05-21T18:43:31.000Z","download_url":"https://codeload.github.com/rcsb/mmtf-python/tar.gz/v1.1.2","html_url":"https://github.com/rcsb/mmtf-python/releases/tag/v1.1.2","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/rcsb/mmtf-python@v1.1.2","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rcsb%2Fmmtf-python/tags/v1.1.2","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rcsb%2Fmmtf-python/tags/v1.1.2/manifests"},{"name":"v1.1.0","sha":"8328fbf5fc7eff50bf6b722c623f2bbfd326e6cc","kind":"tag","published_at":"2018-04-04T07:23:30.000Z","download_url":"https://codeload.github.com/rcsb/mmtf-python/tar.gz/v1.1.0","html_url":"https://github.com/rcsb/mmtf-python/releases/tag/v1.1.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/rcsb/mmtf-python@v1.1.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rcsb%2Fmmtf-python/tags/v1.1.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rcsb%2Fmmtf-python/tags/v1.1.0/manifests"},{"name":"v1.0.12","sha":"ce79c2f75c846bfaf150c9f2635e377b712dd578","kind":"tag","published_at":"2018-02-26T20:24:23.000Z","download_url":"https://codeload.github.com/rcsb/mmtf-python/tar.gz/v1.0.12","html_url":"https://github.com/rcsb/mmtf-python/releases/tag/v1.0.12","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/rcsb/mmtf-python@v1.0.12","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rcsb%2Fmmtf-python/tags/v1.0.12","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rcsb%2Fmmtf-python/tags/v1.0.12/manifests"},{"name":"v1.0.11","sha":"dc236848f1d21a5b94e113c7dccb5358145e78b7","kind":"commit","published_at":"2018-02-26T20:09:25.000Z","download_url":"https://codeload.github.com/rcsb/mmtf-python/tar.gz/v1.0.11","html_url":"https://github.com/rcsb/mmtf-python/releases/tag/v1.0.11","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/rcsb/mmtf-python@v1.0.11","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rcsb%2Fmmtf-python/tags/v1.0.11","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rcsb%2Fmmtf-python/tags/v1.0.11/manifests"},{"name":"v1.0.10","sha":"aa073429149f09e97ab7c98620c39c6dcb1678e0","kind":"commit","published_at":"2018-01-03T09:49:02.000Z","download_url":"https://codeload.github.com/rcsb/mmtf-python/tar.gz/v1.0.10","html_url":"https://github.com/rcsb/mmtf-python/releases/tag/v1.0.10","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/rcsb/mmtf-python@v1.0.10","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rcsb%2Fmmtf-python/tags/v1.0.10","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rcsb%2Fmmtf-python/tags/v1.0.10/manifests"},{"name":"v1.0.7","sha":"2258e23ac2884cd159e133059d4ae8e5ce16107f","kind":"commit","published_at":"2017-06-28T19:48:05.000Z","download_url":"https://codeload.github.com/rcsb/mmtf-python/tar.gz/v1.0.7","html_url":"https://github.com/rcsb/mmtf-python/releases/tag/v1.0.7","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/rcsb/mmtf-python@v1.0.7","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rcsb%2Fmmtf-python/tags/v1.0.7","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rcsb%2Fmmtf-python/tags/v1.0.7/manifests"},{"name":"v1.0.6","sha":"29e130b33a6cc85c33ae9ceebc4f0aaedf676a05","kind":"commit","published_at":"2017-06-02T17:56:10.000Z","download_url":"https://codeload.github.com/rcsb/mmtf-python/tar.gz/v1.0.6","html_url":"https://github.com/rcsb/mmtf-python/releases/tag/v1.0.6","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/rcsb/mmtf-python@v1.0.6","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rcsb%2Fmmtf-python/tags/v1.0.6","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rcsb%2Fmmtf-python/tags/v1.0.6/manifests"},{"name":"v1.0.5","sha":"e36d4e229a9d183b93bea01c5fad49bec0d8909e","kind":"commit","published_at":"2016-11-24T13:05:27.000Z","download_url":"https://codeload.github.com/rcsb/mmtf-python/tar.gz/v1.0.5","html_url":"https://github.com/rcsb/mmtf-python/releases/tag/v1.0.5","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/rcsb/mmtf-python@v1.0.5","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rcsb%2Fmmtf-python/tags/v1.0.5","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rcsb%2Fmmtf-python/tags/v1.0.5/manifests"},{"name":"v1.0.0","sha":"89eff1ff4db68b3fa2e95d00a2837f8d64ec226d","kind":"commit","published_at":"2016-08-15T23:30:06.000Z","download_url":"https://codeload.github.com/rcsb/mmtf-python/tar.gz/v1.0.0","html_url":"https://github.com/rcsb/mmtf-python/releases/tag/v1.0.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/rcsb/mmtf-python@v1.0.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rcsb%2Fmmtf-python/tags/v1.0.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rcsb%2Fmmtf-python/tags/v1.0.0/manifests"},{"name":"v0.2.1","sha":"0d2e69a160f8c0cf9d537c5150c183d46039dbf0","kind":"commit","published_at":"2016-08-02T21:35:39.000Z","download_url":"https://codeload.github.com/rcsb/mmtf-python/tar.gz/v0.2.1","html_url":"https://github.com/rcsb/mmtf-python/releases/tag/v0.2.1","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/rcsb/mmtf-python@v0.2.1","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rcsb%2Fmmtf-python/tags/v0.2.1","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rcsb%2Fmmtf-python/tags/v0.2.1/manifests"}]},"repo_metadata_updated_at":"2025-08-17T00:58:31.923Z","dependent_packages_count":10,"downloads":246877,"downloads_period":"last-month","dependent_repos_count":61,"rankings":{"downloads":1.949365971738701,"dependent_repos_count":1.8994822908151712,"dependent_packages_count":1.1310077593731116,"stargazers_count":9.706608223720824,"forks_count":7.579828578227977,"docker_downloads_count":1.6463060253304407,"average":3.985433141534371},"purl":"pkg:pypi/mmtf-python","advisories":[],"docker_usage_url":"https://docker.ecosyste.ms/usage/pypi/mmtf-python","docker_dependents_count":15,"docker_downloads_count":902,"usage_url":"https://repos.ecosyste.ms/usage/pypi/mmtf-python","dependent_repositories_url":"https://repos.ecosyste.ms/api/v1/usage/pypi/mmtf-python/dependencies","status":null,"funding_links":[],"critical":null,"issue_metadata":{"last_synced_at":"2025-07-05T05:21:44.445Z","issues_count":27,"pull_requests_count":36,"avg_time_to_close_issue":1936446.5416666667,"avg_time_to_close_pull_request":501332.5,"issues_closed_count":24,"pull_requests_closed_count":36,"pull_request_authors_count":11,"issue_authors_count":14,"avg_comments_per_issue":2.074074074074074,"avg_comments_per_pull_request":0.9722222222222222,"merged_pull_requests_count":35,"bot_issues_count":0,"bot_pull_requests_count":1,"past_year_issues_count":1,"past_year_pull_requests_count":0,"past_year_avg_time_to_close_issue":null,"past_year_avg_time_to_close_pull_request":null,"past_year_issues_closed_count":0,"past_year_pull_requests_closed_count":0,"past_year_pull_request_authors_count":0,"past_year_issue_authors_count":1,"past_year_avg_comments_per_issue":3.0,"past_year_avg_comments_per_pull_request":null,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":0,"issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/rcsb%2Fmmtf-python/issues","maintainers":[{"login":"abradle","count":22,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/abradle"},{"login":"pwrose","count":7,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/pwrose"},{"login":"marshuang80","count":5,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/marshuang80"}],"active_maintainers":[]},"versions_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/packages/mmtf-python/versions","version_numbers_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/packages/mmtf-python/version_numbers","dependent_packages_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/packages/mmtf-python/dependent_packages","related_packages_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/packages/mmtf-python/related_packages","maintainers":[{"uuid":"abradle","login":"abradle","name":null,"email":null,"url":null,"packages_count":5,"html_url":"https://pypi.org/user/abradle/","role":null,"created_at":"2023-02-15T10:43:25.458Z","updated_at":"2023-02-15T10:43:25.458Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/maintainers/abradle/packages"},{"uuid":"marshuang80","login":"marshuang80","name":null,"email":null,"url":null,"packages_count":3,"html_url":"https://pypi.org/user/marshuang80/","role":null,"created_at":"2023-02-15T10:43:25.622Z","updated_at":"2023-02-15T10:43:25.622Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/maintainers/marshuang80/packages"}],"registry":{"name":"pypi.org","url":"https://pypi.org","ecosystem":"pypi","default":true,"packages_count":726145,"maintainers_count":308800,"namespaces_count":0,"keywords_count":238245,"github":"pypi","metadata":{"funded_packages_count":50579},"icon_url":"https://github.com/pypi.png","created_at":"2022-04-04T15:19:23.364Z","updated_at":"2025-09-08T05:32:36.857Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/packages","maintainers_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/maintainers","namespaces_url":"https://packages.ecosyste.ms/api/v1/registries/pypi.org/namespaces"}}],"commits":{"id":28178,"full_name":"rcsb/mmtf-python","default_branch":"master","committers":[{"name":"abradle","email":"anthony.richard.bradley@gmail.com","count":178},{"name":"marshuang80","email":"marshuang80@gmail.com","count":8},{"name":"Peter Rose","email":"pwrose@ucsd.edu","count":7},{"name":"Peter Rose","email":"pwrose.ucsd@gmail.com","count":6},{"name":"abradle","email":"you@example.com","count":5},{"name":"Max Linke","email":"max_linke@gmx.de","count":3},{"name":"yuy079","email":"yuy079@ucsd.edu","count":1},{"name":"Zachary Riedlshah","email":"git@zacharyrs.me","count":1},{"name":"Danny Farrell","email":"danpf@uw.edu","count":1},{"name":"Richard Gowers","email":"richardjgowers@gmail.com","count":1},{"name":"richard","email":"richard@nextmovesoftware.com","count":1},{"name":"dependabot[bot]","email":"49699333+dependabot[bot]@users.noreply.github.com","count":1},{"name":"Peter Cock","email":"p.j.a.cock@googlemail.com","count":1},{"name":"Jon Wedell","email":"jonwedell@gmail.com","count":1}],"total_commits":215,"total_committers":14,"total_bot_commits":1,"total_bot_committers":1,"mean_commits":15.357142857142858,"dds":0.172093023255814,"past_year_committers":[{"name":"Peter Rose","email":"pwrose.ucsd@gmail.com","count":6},{"name":"Peter Rose","email":"pwrose@ucsd.edu","count":1},{"name":"richard","email":"richard@nextmovesoftware.com","count":1}],"past_year_total_commits":8,"past_year_total_committers":3,"past_year_total_bot_commits":0,"past_year_total_bot_committers":0,"past_year_mean_commits":2.6666666666666665,"past_year_dds":0.25,"last_synced_at":"2023-10-25T14:22:11.468Z","last_synced_commit":"dc2181ec31809ae7212def6636e50fd49d222411","created_at":"2023-03-07T16:37:10.511Z","updated_at":"2023-10-25T14:22:11.468Z","commits_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories/rcsb%2Fmmtf-python/commits","host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-08T00:00:16.827Z","repositories_count":5483322,"commits_count":854270774,"contributors_count":31138750,"owners_count":908526,"icon_url":"https://github.com/github.png","host_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories"}},"issues_stats":{"full_name":"rcsb/mmtf-python","html_url":"https://github.com/rcsb/mmtf-python","last_synced_at":"2025-08-17T00:58:31.865Z","status":"error","issues_count":27,"pull_requests_count":36,"avg_time_to_close_issue":1936446.5416666667,"avg_time_to_close_pull_request":501332.5,"issues_closed_count":24,"pull_requests_closed_count":36,"pull_request_authors_count":11,"issue_authors_count":14,"avg_comments_per_issue":2.074074074074074,"avg_comments_per_pull_request":0.9722222222222222,"merged_pull_requests_count":35,"bot_issues_count":0,"bot_pull_requests_count":1,"past_year_issues_count":1,"past_year_pull_requests_count":0,"past_year_avg_time_to_close_issue":null,"past_year_avg_time_to_close_pull_request":null,"past_year_issues_closed_count":0,"past_year_pull_requests_closed_count":0,"past_year_pull_request_authors_count":0,"past_year_issue_authors_count":1,"past_year_avg_comments_per_issue":3.0,"past_year_avg_comments_per_pull_request":null,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":0,"created_at":"2023-05-10T14:48:39.433Z","updated_at":"2025-09-02T01:49:56.021Z","repository_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/rcsb%2Fmmtf-python","issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/rcsb%2Fmmtf-python/issues","issue_labels_count":{"dependencies":1},"pull_request_labels_count":{"dependencies":1},"issue_author_associations_count":{"NONE":13,"COLLABORATOR":8,"CONTRIBUTOR":6},"pull_request_author_associations_count":{"COLLABORATOR":26,"CONTRIBUTOR":10},"issue_authors":{"zacharyrs":4,"abradle":4,"marshuang80":3,"yurivict":3,"danpf":2,"rathann":2,"hainm":2,"dkoes":1,"pwrose":1,"molecules":1,"tomnewport":1,"dominiquesydow":1,"dprada":1,"jgreener64":1},"pull_request_authors":{"abradle":18,"pwrose":6,"richardjgowers":2,"marshuang80":2,"kain88-de":2,"danpf":1,"yuy079":1,"zacharyrs":1,"jonwedell":1,"dependabot[bot]":1,"peterjc":1},"host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-08T00:00:17.013Z","repositories_count":10166699,"issues_count":32013288,"pull_requests_count":100268859,"authors_count":10729412,"icon_url":"https://github.com/github.png","host_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories","owners_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/owners","authors_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors"},"past_year_issue_labels_count":{},"past_year_pull_request_labels_count":{},"past_year_issue_author_associations_count":{},"past_year_pull_request_author_associations_count":{},"past_year_issue_authors":{},"past_year_pull_request_authors":{},"maintainers":[{"login":"abradle","count":22,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/abradle"},{"login":"pwrose","count":7,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/pwrose"},{"login":"marshuang80","count":5,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/marshuang80"}],"active_maintainers":[]},"events":{"total":{"IssueCommentEvent":1},"last_year":{"IssueCommentEvent":1}},"keywords":[],"dependencies":[{"ecosystem":"pypi","filepath":"requirements.txt","sha":null,"kind":"manifest","created_at":"2022-08-20T08:40:29.290Z","updated_at":"2022-08-20T08:40:29.290Z","repository_link":"https://github.com/rcsb/mmtf-python/blob/master/requirements.txt","dependencies":[{"id":2153546466,"package_name":"numpy","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":2153546467,"package_name":"nose","ecosystem":"pypi","requirements":"*","direct":true,"kind":"runtime","optional":false},{"id":2153546468,"package_name":"msgpack","ecosystem":"pypi","requirements":"\u003e=1.0.0","direct":true,"kind":"runtime","optional":false}]},{"ecosystem":"pypi","filepath":"setup.py","sha":null,"kind":"manifest","created_at":"2022-08-20T08:40:29.403Z","updated_at":"2022-08-20T08:40:29.403Z","repository_link":"https://github.com/rcsb/mmtf-python/blob/master/setup.py","dependencies":[{"id":2153549242,"package_name":"msgpack","ecosystem":"pypi","requirements":"\u003e=1.0.0","direct":true,"kind":"runtime","optional":false}]}],"score":18.951605903873915,"created_at":"2025-09-08T11:18:41.125Z","updated_at":"2025-10-07T08:25:06.447Z","avatar_url":"https://github.com/rcsb.png","language":"Python","category":null,"sub_category":null,"monthly_downloads":246877,"funding_links":[],"readme_doi_urls":[],"works":{},"citation_counts":{},"total_citations":0,"keywords_from_contributors":["bioinformatics","protein-structure","molecular-dynamics","computational-chemistry","genomics","closember","molecular-simulation","pdb","structural-bioinformatics","dna"],"project_url":"https://science.ecosyste.ms/api/v1/projects/66135","html_url":"https://science.ecosyste.ms/projects/66135"}