{"id":66240,"name":"DAISIE","description":"DAISIE","url":"https://github.com/rsetienne/daisie","last_synced_at":"2025-09-08T13:36:54.024Z","repository":{"id":37431575,"uuid":"152734970","full_name":"rsetienne/DAISIE","owner":"rsetienne","description":"DAISIE","archived":false,"fork":false,"pushed_at":"2025-07-29T16:15:59.000Z","size":45828,"stargazers_count":9,"open_issues_count":21,"forks_count":11,"subscribers_count":5,"default_branch":"master","last_synced_at":"2025-08-07T01:16:16.394Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":"","language":"R","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"gpl-3.0","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/rsetienne.png","metadata":{"files":{"readme":"README.md","changelog":"NEWS.md","contributing":"CONTRIBUTING.md","funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null}},"created_at":"2018-10-12T10:33:22.000Z","updated_at":"2025-05-31T21:16:42.000Z","dependencies_parsed_at":"2024-06-10T15:14:16.912Z","dependency_job_id":"cabc1b2a-f32c-4199-b5b9-0eee77a05fe7","html_url":"https://github.com/rsetienne/DAISIE","commit_stats":{"total_commits":2203,"total_committers":17,"mean_commits":"129.58823529411765","dds":0.4947798456650022,"last_synced_commit":"413db4fad09a4ab8d60c99ba3c57592ee143a398"},"previous_names":[],"tags_count":23,"template":false,"template_full_name":null,"purl":"pkg:github/rsetienne/DAISIE","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rsetienne%2FDAISIE","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rsetienne%2FDAISIE/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rsetienne%2FDAISIE/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rsetienne%2FDAISIE/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/rsetienne","download_url":"https://codeload.github.com/rsetienne/DAISIE/tar.gz/refs/heads/master","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rsetienne%2FDAISIE/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":274194644,"owners_count":25239085,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-09-08T02:00:09.813Z","response_time":121,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"owner":{"login":"rsetienne","name":"Rampal S. Etienne","uuid":"14234521","kind":"user","description":null,"email":"","website":null,"location":"Groningen, The Netherlands","twitter":null,"company":"University of Groningen","icon_url":"https://avatars.githubusercontent.com/u/14234521?u=52df3e3e78270c4b1230f80a187e75751a4551ca\u0026v=4","repositories_count":5,"last_synced_at":"2023-03-05T01:33:59.906Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/rsetienne","funding_links":[],"total_stars":null,"followers":null,"following":null,"created_at":"2022-11-15T03:45:22.919Z","updated_at":"2023-03-05T01:33:59.950Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/rsetienne","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/rsetienne/repositories"},"packages":[{"id":434610,"name":"DAISIE","ecosystem":"cran","description":"Dynamical Assembly of Islands by Speciation, Immigration and\nExtinction","homepage":"https://github.com/rsetienne/DAISIE","licenses":"GPL (≥ 3) | file LICENSE","normalized_licenses":["AML"],"repository_url":"https://github.com/rsetienne/DAISIE","keywords_array":[],"namespace":null,"versions_count":13,"first_release_published_at":"2015-05-21T09:40:00.000Z","latest_release_published_at":"2025-06-01T00:00:00.000Z","latest_release_number":"4.6.0","last_synced_at":"2025-08-07T01:04:52.734Z","created_at":"2022-04-06T22:47:16.413Z","updated_at":"2025-08-07T01:10:14.636Z","registry_url":"https://cran.r-project.org/package=DAISIE","install_command":null,"documentation_url":"http://cran.r-project.org/web/packages/DAISIE/DAISIE.pdf","metadata":{},"repo_metadata":{"id":37431575,"uuid":"152734970","full_name":"rsetienne/DAISIE","owner":"rsetienne","description":"DAISIE","archived":false,"fork":false,"pushed_at":"2025-07-29T16:15:59.000Z","size":45828,"stargazers_count":9,"open_issues_count":21,"forks_count":11,"subscribers_count":5,"default_branch":"master","last_synced_at":"2025-07-29T19:09:29.454Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":"","language":"R","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"gpl-3.0","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/rsetienne.png","metadata":{"files":{"readme":"README.md","changelog":"NEWS.md","contributing":"CONTRIBUTING.md","funding":null,"license":"LICENSE","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null}},"created_at":"2018-10-12T10:33:22.000Z","updated_at":"2025-05-31T21:16:42.000Z","dependencies_parsed_at":"2024-06-10T15:14:16.912Z","dependency_job_id":"cabc1b2a-f32c-4199-b5b9-0eee77a05fe7","html_url":"https://github.com/rsetienne/DAISIE","commit_stats":{"total_commits":2203,"total_committers":17,"mean_commits":"129.58823529411765","dds":0.4947798456650022,"last_synced_commit":"413db4fad09a4ab8d60c99ba3c57592ee143a398"},"previous_names":[],"tags_count":23,"template":false,"template_full_name":null,"purl":"pkg:github/rsetienne/DAISIE","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rsetienne%2FDAISIE","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rsetienne%2FDAISIE/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rsetienne%2FDAISIE/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rsetienne%2FDAISIE/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/rsetienne","download_url":"https://codeload.github.com/rsetienne/DAISIE/tar.gz/refs/heads/master","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rsetienne%2FDAISIE/sbom","host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":269182199,"owners_count":24374077,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-08-06T02:00:09.910Z","response_time":99,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"},"owner_record":{"login":"rsetienne","name":"Rampal S. Etienne","uuid":"14234521","kind":"user","description":null,"email":"","website":null,"location":"Groningen, The Netherlands","twitter":null,"company":"University of Groningen","icon_url":"https://avatars.githubusercontent.com/u/14234521?u=52df3e3e78270c4b1230f80a187e75751a4551ca\u0026v=4","repositories_count":5,"last_synced_at":"2023-03-05T01:33:59.906Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/rsetienne","funding_links":[],"total_stars":null,"followers":null,"following":null,"created_at":"2022-11-15T03:45:22.919Z","updated_at":"2023-03-05T01:33:59.950Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/rsetienne","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/rsetienne/repositories"},"tags":[{"name":"v4.5.0","sha":"48b6fb585f861528548df04863e5676e77cfc2bd","kind":"commit","published_at":"2025-02-05T12:27:29.000Z","download_url":"https://codeload.github.com/rsetienne/DAISIE/tar.gz/v4.5.0","html_url":"https://github.com/rsetienne/DAISIE/releases/tag/v4.5.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/rsetienne/DAISIE@v4.5.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rsetienne%2FDAISIE/tags/v4.5.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rsetienne%2FDAISIE/tags/v4.5.0/manifests"},{"name":"v4.4.1","sha":"c5c4fbaa2a915c5870096df28d088b960a0b03f7","kind":"commit","published_at":"2023-10-21T14:15:32.000Z","download_url":"https://codeload.github.com/rsetienne/DAISIE/tar.gz/v4.4.1","html_url":"https://github.com/rsetienne/DAISIE/releases/tag/v4.4.1","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/rsetienne/DAISIE@v4.4.1","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rsetienne%2FDAISIE/tags/v4.4.1","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rsetienne%2FDAISIE/tags/v4.4.1/manifests"},{"name":"v4.4.0","sha":"a9a523c8b0d5abe065865df874eede28c2544406","kind":"commit","published_at":"2023-03-30T15:07:07.000Z","download_url":"https://codeload.github.com/rsetienne/DAISIE/tar.gz/v4.4.0","html_url":"https://github.com/rsetienne/DAISIE/releases/tag/v4.4.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/rsetienne/DAISIE@v4.4.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rsetienne%2FDAISIE/tags/v4.4.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rsetienne%2FDAISIE/tags/v4.4.0/manifests"},{"name":"v4.3.4","sha":"22d27375814b8825878494973f60bbe88d20ca0a","kind":"commit","published_at":"2023-03-16T14:57:30.000Z","download_url":"https://codeload.github.com/rsetienne/DAISIE/tar.gz/v4.3.4","html_url":"https://github.com/rsetienne/DAISIE/releases/tag/v4.3.4","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/rsetienne/DAISIE@v4.3.4","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rsetienne%2FDAISIE/tags/v4.3.4","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rsetienne%2FDAISIE/tags/v4.3.4/manifests"},{"name":"v4.3.3","sha":"a19c458c45bdf5778d64b682cca3e84890800f70","kind":"commit","published_at":"2023-03-10T14:50:43.000Z","download_url":"https://codeload.github.com/rsetienne/DAISIE/tar.gz/v4.3.3","html_url":"https://github.com/rsetienne/DAISIE/releases/tag/v4.3.3","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/rsetienne/DAISIE@v4.3.3","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rsetienne%2FDAISIE/tags/v4.3.3","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rsetienne%2FDAISIE/tags/v4.3.3/manifests"},{"name":"v4.3.2","sha":"2d1c832809ce8431bb34ada1d1dc63ef308b23c0","kind":"commit","published_at":"2023-02-25T08:10:51.000Z","download_url":"https://codeload.github.com/rsetienne/DAISIE/tar.gz/v4.3.2","html_url":"https://github.com/rsetienne/DAISIE/releases/tag/v4.3.2","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/rsetienne/DAISIE@v4.3.2","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rsetienne%2FDAISIE/tags/v4.3.2","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rsetienne%2FDAISIE/tags/v4.3.2/manifests"},{"name":"v4.3.1","sha":"7d62c632bd6fb73a0a4ea1f78f338cc966320ba8","kind":"commit","published_at":"2023-02-12T14:09:16.000Z","download_url":"https://codeload.github.com/rsetienne/DAISIE/tar.gz/v4.3.1","html_url":"https://github.com/rsetienne/DAISIE/releases/tag/v4.3.1","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/rsetienne/DAISIE@v4.3.1","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rsetienne%2FDAISIE/tags/v4.3.1","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rsetienne%2FDAISIE/tags/v4.3.1/manifests"},{"name":"v4.3.0","sha":"d0ed3dff3907e371f7aeddd8d5978df17bde6f28","kind":"commit","published_at":"2023-01-26T16:28:51.000Z","download_url":"https://codeload.github.com/rsetienne/DAISIE/tar.gz/v4.3.0","html_url":"https://github.com/rsetienne/DAISIE/releases/tag/v4.3.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/rsetienne/DAISIE@v4.3.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rsetienne%2FDAISIE/tags/v4.3.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rsetienne%2FDAISIE/tags/v4.3.0/manifests"},{"name":"v4.2.1","sha":"58ecf4a82111a00ee93591a1267852a3f3e2efc9","kind":"commit","published_at":"2022-06-08T12:16:06.000Z","download_url":"https://codeload.github.com/rsetienne/DAISIE/tar.gz/v4.2.1","html_url":"https://github.com/rsetienne/DAISIE/releases/tag/v4.2.1","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/rsetienne/DAISIE@v4.2.1","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rsetienne%2FDAISIE/tags/v4.2.1","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rsetienne%2FDAISIE/tags/v4.2.1/manifests"},{"name":"v4.2.0","sha":"57d347a49819902e418ff6b24c3128aa8e56d0ab","kind":"commit","published_at":"2022-05-30T16:35:10.000Z","download_url":"https://codeload.github.com/rsetienne/DAISIE/tar.gz/v4.2.0","html_url":"https://github.com/rsetienne/DAISIE/releases/tag/v4.2.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/rsetienne/DAISIE@v4.2.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rsetienne%2FDAISIE/tags/v4.2.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rsetienne%2FDAISIE/tags/v4.2.0/manifests"},{"name":"v4.1.1","sha":"36674127e0451f78372196bf759e11b5f05c9184","kind":"commit","published_at":"2022-04-20T20:26:34.000Z","download_url":"https://codeload.github.com/rsetienne/DAISIE/tar.gz/v4.1.1","html_url":"https://github.com/rsetienne/DAISIE/releases/tag/v4.1.1","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/rsetienne/DAISIE@v4.1.1","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rsetienne%2FDAISIE/tags/v4.1.1","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rsetienne%2FDAISIE/tags/v4.1.1/manifests"},{"name":"v4.1.0","sha":"a20778207b69db311ab3658d19a72d72f42e1287","kind":"commit","published_at":"2022-04-14T09:35:54.000Z","download_url":"https://codeload.github.com/rsetienne/DAISIE/tar.gz/v4.1.0","html_url":"https://github.com/rsetienne/DAISIE/releases/tag/v4.1.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/rsetienne/DAISIE@v4.1.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rsetienne%2FDAISIE/tags/v4.1.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rsetienne%2FDAISIE/tags/v4.1.0/manifests"},{"name":"v4.0.5","sha":"fcc2d2386236872bf54bac52d0f057d840652273","kind":"commit","published_at":"2021-11-17T13:09:11.000Z","download_url":"https://codeload.github.com/rsetienne/DAISIE/tar.gz/v4.0.5","html_url":"https://github.com/rsetienne/DAISIE/releases/tag/v4.0.5","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/rsetienne/DAISIE@v4.0.5","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rsetienne%2FDAISIE/tags/v4.0.5","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rsetienne%2FDAISIE/tags/v4.0.5/manifests"},{"name":"v4.0.2","sha":"e607ce8c20e2caa9e0ff389fa6908e1135365dbd","kind":"commit","published_at":"2021-05-26T14:11:12.000Z","download_url":"https://codeload.github.com/rsetienne/DAISIE/tar.gz/v4.0.2","html_url":"https://github.com/rsetienne/DAISIE/releases/tag/v4.0.2","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/rsetienne/DAISIE@v4.0.2","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rsetienne%2FDAISIE/tags/v4.0.2","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rsetienne%2FDAISIE/tags/v4.0.2/manifests"},{"name":"v4.0.1","sha":"899841716790544e7c67f061d860d9fe55379e56","kind":"commit","published_at":"2021-05-22T16:40:05.000Z","download_url":"https://codeload.github.com/rsetienne/DAISIE/tar.gz/v4.0.1","html_url":"https://github.com/rsetienne/DAISIE/releases/tag/v4.0.1","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/rsetienne/DAISIE@v4.0.1","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rsetienne%2FDAISIE/tags/v4.0.1","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rsetienne%2FDAISIE/tags/v4.0.1/manifests"},{"name":"v4.0.0","sha":"842f5b3282258e3eaab7352f9c280286da6feca9","kind":"tag","published_at":"2021-05-21T15:17:59.000Z","download_url":"https://codeload.github.com/rsetienne/DAISIE/tar.gz/v4.0.0","html_url":"https://github.com/rsetienne/DAISIE/releases/tag/v4.0.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/rsetienne/DAISIE@v4.0.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rsetienne%2FDAISIE/tags/v4.0.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rsetienne%2FDAISIE/tags/v4.0.0/manifests"},{"name":"v3.2.1","sha":"6da0e3f65680d5f237345ef80935bda7541cf230","kind":"commit","published_at":"2021-03-24T14:02:39.000Z","download_url":"https://codeload.github.com/rsetienne/DAISIE/tar.gz/v3.2.1","html_url":"https://github.com/rsetienne/DAISIE/releases/tag/v3.2.1","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/rsetienne/DAISIE@v3.2.1","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rsetienne%2FDAISIE/tags/v3.2.1","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rsetienne%2FDAISIE/tags/v3.2.1/manifests"},{"name":"v3.2.0","sha":"dc62d867953ef71587d8660d9fa17c9856a8199a","kind":"commit","published_at":"2021-03-23T14:45:47.000Z","download_url":"https://codeload.github.com/rsetienne/DAISIE/tar.gz/v3.2.0","html_url":"https://github.com/rsetienne/DAISIE/releases/tag/v3.2.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/rsetienne/DAISIE@v3.2.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rsetienne%2FDAISIE/tags/v3.2.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rsetienne%2FDAISIE/tags/v3.2.0/manifests"},{"name":"v3.1.0","sha":"2fb3dd0747874a33bcfede63d178e8d2724b1e47","kind":"commit","published_at":"2020-09-27T21:19:50.000Z","download_url":"https://codeload.github.com/rsetienne/DAISIE/tar.gz/v3.1.0","html_url":"https://github.com/rsetienne/DAISIE/releases/tag/v3.1.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/rsetienne/DAISIE@v3.1.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rsetienne%2FDAISIE/tags/v3.1.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rsetienne%2FDAISIE/tags/v3.1.0/manifests"},{"name":"v3.0.1","sha":"31f2d9574127ab761bd4564e65c037fe08ea8385","kind":"tag","published_at":"2020-08-28T08:30:31.000Z","download_url":"https://codeload.github.com/rsetienne/DAISIE/tar.gz/v3.0.1","html_url":"https://github.com/rsetienne/DAISIE/releases/tag/v3.0.1","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/rsetienne/DAISIE@v3.0.1","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rsetienne%2FDAISIE/tags/v3.0.1","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rsetienne%2FDAISIE/tags/v3.0.1/manifests"},{"name":"v3.0.0","sha":"25d02850678e02ac3db966ee4fd145eeebcf65b3","kind":"commit","published_at":"2020-08-11T19:47:41.000Z","download_url":"https://codeload.github.com/rsetienne/DAISIE/tar.gz/v3.0.0","html_url":"https://github.com/rsetienne/DAISIE/releases/tag/v3.0.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/rsetienne/DAISIE@v3.0.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rsetienne%2FDAISIE/tags/v3.0.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rsetienne%2FDAISIE/tags/v3.0.0/manifests"},{"name":"v2.0.1","sha":"f948015646623fec57095eb8cb059927a546fc70","kind":"commit","published_at":"2020-06-18T08:21:13.000Z","download_url":"https://codeload.github.com/rsetienne/DAISIE/tar.gz/v2.0.1","html_url":"https://github.com/rsetienne/DAISIE/releases/tag/v2.0.1","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/rsetienne/DAISIE@v2.0.1","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rsetienne%2FDAISIE/tags/v2.0.1","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rsetienne%2FDAISIE/tags/v2.0.1/manifests"},{"name":"v2.0","sha":"e7a41daf6e3d52342be763ff51136e0103c379ed","kind":"commit","published_at":"2020-05-14T16:57:17.000Z","download_url":"https://codeload.github.com/rsetienne/DAISIE/tar.gz/v2.0","html_url":"https://github.com/rsetienne/DAISIE/releases/tag/v2.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/rsetienne/DAISIE@v2.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rsetienne%2FDAISIE/tags/v2.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rsetienne%2FDAISIE/tags/v2.0/manifests"}]},"repo_metadata_updated_at":"2025-08-07T01:10:14.636Z","dependent_packages_count":3,"downloads":308,"downloads_period":"last-month","dependent_repos_count":12,"rankings":{"downloads":38.22896106226449,"dependent_repos_count":8.409243886021986,"dependent_packages_count":10.963574376457922,"stargazers_count":17.49955140857707,"forks_count":5.822716669657276,"docker_downloads_count":12.753454153956575,"average":15.612916926155885},"purl":"pkg:cran/DAISIE","advisories":[],"docker_usage_url":"https://docker.ecosyste.ms/usage/cran/DAISIE","docker_dependents_count":3,"docker_downloads_count":20392,"usage_url":"https://repos.ecosyste.ms/usage/cran/DAISIE","dependent_repositories_url":"https://repos.ecosyste.ms/api/v1/usage/cran/DAISIE/dependencies","status":null,"funding_links":[],"critical":null,"issue_metadata":{"last_synced_at":"2025-07-21T13:34:55.446Z","issues_count":57,"pull_requests_count":65,"avg_time_to_close_issue":7599301.6,"avg_time_to_close_pull_request":683895.0,"issues_closed_count":40,"pull_requests_closed_count":65,"pull_request_authors_count":9,"issue_authors_count":5,"avg_comments_per_issue":1.2982456140350878,"avg_comments_per_pull_request":0.9076923076923077,"merged_pull_requests_count":54,"bot_issues_count":0,"bot_pull_requests_count":0,"past_year_issues_count":0,"past_year_pull_requests_count":14,"past_year_avg_time_to_close_issue":null,"past_year_avg_time_to_close_pull_request":183628.2142857143,"past_year_issues_closed_count":0,"past_year_pull_requests_closed_count":14,"past_year_pull_request_authors_count":4,"past_year_issue_authors_count":0,"past_year_avg_comments_per_issue":null,"past_year_avg_comments_per_pull_request":0.21428571428571427,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":11,"issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/rsetienne%2FDAISIE/issues","maintainers":[{"login":"Neves-P","count":78,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/Neves-P"},{"login":"rsetienne","count":18,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/rsetienne"},{"login":"richelbilderbeek","count":6,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/richelbilderbeek"},{"login":"joshwlambert","count":5,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/joshwlambert"},{"login":"luislvalente","count":4,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/luislvalente"},{"login":"xieshu95","count":3,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/xieshu95"},{"login":"HHildenbrandt","count":2,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/HHildenbrandt"},{"login":"O-Dehayem","count":1,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/O-Dehayem"}],"active_maintainers":[{"login":"rsetienne","count":7,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/rsetienne"},{"login":"Neves-P","count":5,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/Neves-P"},{"login":"luislvalente","count":1,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/luislvalente"},{"login":"O-Dehayem","count":1,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/O-Dehayem"}]},"versions_url":"https://packages.ecosyste.ms/api/v1/registries/cran.r-project.org/packages/DAISIE/versions","version_numbers_url":"https://packages.ecosyste.ms/api/v1/registries/cran.r-project.org/packages/DAISIE/version_numbers","dependent_packages_url":"https://packages.ecosyste.ms/api/v1/registries/cran.r-project.org/packages/DAISIE/dependent_packages","related_packages_url":"https://packages.ecosyste.ms/api/v1/registries/cran.r-project.org/packages/DAISIE/related_packages","maintainers":[{"uuid":"r.s.etienne@rug.nl","login":null,"name":"Rampal S. Etienne","email":"r.s.etienne@rug.nl","url":null,"packages_count":6,"html_url":null,"role":null,"created_at":"2022-11-14T17:22:23.602Z","updated_at":"2022-11-14T17:22:23.602Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/cran.r-project.org/maintainers/r.s.etienne@rug.nl/packages"}],"registry":{"name":"cran.r-project.org","url":"https://cran.r-project.org","ecosystem":"cran","default":true,"packages_count":26181,"maintainers_count":14299,"namespaces_count":0,"keywords_count":8326,"github":"r-project-org","metadata":{"funded_packages_count":539},"icon_url":"https://github.com/r-project-org.png","created_at":"2022-04-06T16:32:25.637Z","updated_at":"2025-09-08T06:54:01.855Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/cran.r-project.org/packages","maintainers_url":"https://packages.ecosyste.ms/api/v1/registries/cran.r-project.org/maintainers","namespaces_url":"https://packages.ecosyste.ms/api/v1/registries/cran.r-project.org/namespaces"}}],"commits":{"id":723855,"full_name":"rsetienne/DAISIE","default_branch":"master","committers":[{"name":"Neves-P","email":"p.m.santos.neves@rug.nl","login":"Neves-P","count":1133},{"name":"joshwlambert","email":"j.w.l.lambert@rug.nl","login":"joshwlambert","count":402},{"name":"rsetienne","email":"rampaletienne@gmail.om","login":null,"count":345},{"name":"rsetienne","email":"rampaletienne@gmail.com","login":"rsetienne","count":180},{"name":"xieshu95","email":"xieshu95@gmail.com","login":"xieshu95","count":122},{"name":"richelbilderbeek","email":"richel@richelbilderbeek.nl","login":null,"count":122},{"name":"luislvalente","email":"luislvalente@gmail.com","login":"luislvalente","count":34},{"name":"Hanno Hildenbrandt","email":"h.hildenbrandt@rug.nl","login":"HHildenbrandt","count":33},{"name":"O. Dehayem Nanwou","email":"o.d.nanwou@rug.nl","login":"Dehayem","count":26},{"name":"=","email":"=","login":null,"count":22},{"name":"Ornela Dehayem Nanwou","email":"o.dehayem@gmail.com","login":"O-Dehayem","count":7},{"name":"P.M. Santos neves","email":"P282067@WORKSPACE.RUG.NL","login":null,"count":6},{"name":"rscherrer","email":"raphael.scherrer@evobio.eu","login":"rscherrer","count":3},{"name":"hanno","email":"hanno@DESKTOP-R4","login":null,"count":2},{"name":"P.M. Santos neves","email":"P282067@workspace.rug.nl","login":null,"count":1},{"name":"Luis Valente","email":"luisvalente@client-145-120-39-6.surfnet.eduroam.rug.nl","login":null,"count":1},{"name":"Luis Valente","email":"luis@Luiss-MacBook-Pro.local","login":null,"count":1},{"name":"Luis Valente","email":"luis.valente@naturalis.nl","login":null,"count":1},{"name":"Yangshen0325","email":"89144088+Yangshen0325","login":"Yangshen0325","count":1}],"total_commits":2442,"total_committers":19,"total_bot_commits":0,"total_bot_committers":0,"mean_commits":128.52631578947367,"dds":0.5360360360360361,"past_year_committers":[{"name":"rsetienne","email":"rampaletienne@gmail.om","login":null,"count":144},{"name":"O. Dehayem Nanwou","email":"o.d.nanwou@rug.nl","login":"Dehayem","count":26},{"name":"Neves-P","email":"p.m.santos.neves@rug.nl","login":"Neves-P","count":17},{"name":"Ornela Dehayem Nanwou","email":"o.dehayem@gmail.com","login":"O-Dehayem","count":7},{"name":"joshwlambert","email":"joshua.lambert@lshtm.ac.uk","login":"joshwlambert","count":3},{"name":"Hanno Hildenbrandt","email":"h.hildenbrandt@rug.nl","login":"HHildenbrandt","count":3},{"name":"luislvalente","email":"luislvalente@gmail.com","login":"luislvalente","count":1}],"past_year_total_commits":201,"past_year_total_committers":7,"past_year_total_bot_commits":0,"past_year_total_bot_committers":0,"past_year_mean_commits":28.714285714285715,"past_year_dds":0.28358208955223885,"last_synced_at":"2025-07-21T13:39:23.560Z","last_synced_commit":"c04aaa6020c87f03a8d24fd93332f40de615ba87","created_at":"2023-03-09T13:09:56.123Z","updated_at":"2025-07-21T13:39:49.527Z","commits_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories/rsetienne%2FDAISIE/commits","host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-08T00:00:16.827Z","repositories_count":5483322,"commits_count":854270774,"contributors_count":31138750,"owners_count":908526,"icon_url":"https://github.com/github.png","host_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories"}},"issues_stats":{"full_name":"rsetienne/DAISIE","html_url":"https://github.com/rsetienne/DAISIE","last_synced_at":"2025-08-31T14:29:54.135Z","status":null,"issues_count":57,"pull_requests_count":77,"avg_time_to_close_issue":7599301.6,"avg_time_to_close_pull_request":585170.5866666667,"issues_closed_count":40,"pull_requests_closed_count":75,"pull_request_authors_count":9,"issue_authors_count":5,"avg_comments_per_issue":1.2982456140350878,"avg_comments_per_pull_request":0.7662337662337663,"merged_pull_requests_count":63,"bot_issues_count":0,"bot_pull_requests_count":0,"past_year_issues_count":0,"past_year_pull_requests_count":27,"past_year_avg_time_to_close_issue":null,"past_year_avg_time_to_close_pull_request":114370.28,"past_year_issues_closed_count":0,"past_year_pull_requests_closed_count":25,"past_year_pull_request_authors_count":4,"past_year_issue_authors_count":0,"past_year_avg_comments_per_issue":null,"past_year_avg_comments_per_pull_request":0.1111111111111111,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":20,"created_at":"2023-05-10T22:47:15.054Z","updated_at":"2025-09-01T21:48:03.456Z","repository_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/rsetienne%2FDAISIE","issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/rsetienne%2FDAISIE/issues","issue_labels_count":{"refactor":19,"bug":5,"High priority":5,"Low Priority":2,"depends":1,"enhancement":1,"suggestion":1,"Medium Priority":1},"pull_request_labels_count":{"bug":3,"High priority":3,"enhancement":1},"issue_author_associations_count":{"COLLABORATOR":54,"CONTRIBUTOR":2,"NONE":1},"pull_request_author_associations_count":{"COLLABORATOR":51,"OWNER":26,"CONTRIBUTOR":2},"issue_authors":{"Neves-P":45,"richelbilderbeek":6,"joshwlambert":3,"Yangshen0325":2,"romainfrancois":1},"pull_request_authors":{"Neves-P":37,"rsetienne":26,"luislvalente":5,"HHildenbrandt":3,"xieshu95":3,"joshwlambert":2,"Yangshen0325":1,"O-Dehayem":1,"rscherrer":1},"host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-03T00:00:08.273Z","repositories_count":10067183,"issues_count":31166656,"pull_requests_count":94972760,"authors_count":10688095,"icon_url":"https://github.com/github.png","host_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories","owners_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/owners","authors_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors"},"past_year_issue_labels_count":{},"past_year_pull_request_labels_count":{},"past_year_issue_author_associations_count":{},"past_year_pull_request_author_associations_count":{"OWNER":14,"COLLABORATOR":13},"past_year_issue_authors":{},"past_year_pull_request_authors":{"rsetienne":14,"Neves-P":10,"luislvalente":2,"O-Dehayem":1},"maintainers":[{"login":"Neves-P","count":82,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/Neves-P"},{"login":"rsetienne","count":26,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/rsetienne"},{"login":"richelbilderbeek","count":6,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/richelbilderbeek"},{"login":"joshwlambert","count":5,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/joshwlambert"},{"login":"luislvalente","count":5,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/luislvalente"},{"login":"HHildenbrandt","count":3,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/HHildenbrandt"},{"login":"xieshu95","count":3,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/xieshu95"},{"login":"O-Dehayem","count":1,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/O-Dehayem"}],"active_maintainers":[{"login":"rsetienne","count":14,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/rsetienne"},{"login":"Neves-P","count":10,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/Neves-P"},{"login":"luislvalente","count":2,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/luislvalente"},{"login":"O-Dehayem","count":1,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/O-Dehayem"}]},"events":{"total":{"ReleaseEvent":1,"DeleteEvent":1,"IssueCommentEvent":1,"MemberEvent":1,"PushEvent":172,"PullRequestReviewCommentEvent":4,"PullRequestReviewEvent":7,"PullRequestEvent":25,"CreateEvent":8},"last_year":{"ReleaseEvent":1,"DeleteEvent":1,"IssueCommentEvent":1,"MemberEvent":1,"PushEvent":172,"PullRequestReviewCommentEvent":4,"PullRequestReviewEvent":7,"PullRequestEvent":25,"CreateEvent":8}},"keywords":[],"dependencies":[{"ecosystem":"actions","filepath":".github/workflows/R-CMD-check.yaml","sha":null,"kind":"manifest","created_at":"2023-02-18T08:01:12.787Z","updated_at":"2023-02-18T08:01:12.787Z","repository_link":"https://github.com/rsetienne/DAISIE/blob/master/.github/workflows/R-CMD-check.yaml","dependencies":[{"id":7757080129,"package_name":"actions/checkout","ecosystem":"actions","requirements":"v3","direct":true,"kind":"composite","optional":false},{"id":7757080133,"package_name":"r-lib/actions/setup-pandoc","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":7757080136,"package_name":"r-lib/actions/setup-r","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":7757080141,"package_name":"r-lib/actions/setup-r-dependencies","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":7757080144,"package_name":"r-lib/actions/check-r-package","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false}]},{"ecosystem":"actions","filepath":".github/workflows/test-coverage.yaml","sha":null,"kind":"manifest","created_at":"2023-02-18T08:01:12.957Z","updated_at":"2023-02-18T08:01:12.957Z","repository_link":"https://github.com/rsetienne/DAISIE/blob/master/.github/workflows/test-coverage.yaml","dependencies":[{"id":7757080923,"package_name":"actions/checkout","ecosystem":"actions","requirements":"v3","direct":true,"kind":"composite","optional":false},{"id":7757080930,"package_name":"r-lib/actions/setup-r","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":7757080931,"package_name":"r-lib/actions/setup-r-dependencies","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":7757080933,"package_name":"actions/upload-artifact","ecosystem":"actions","requirements":"v3","direct":true,"kind":"composite","optional":false}]},{"ecosystem":"cran","filepath":"DESCRIPTION","sha":null,"kind":"manifest","created_at":"2023-02-18T08:01:13.161Z","updated_at":"2023-02-18T08:01:13.161Z","repository_link":"https://github.com/rsetienne/DAISIE/blob/master/DESCRIPTION","dependencies":[{"id":7757082826,"package_name":"R","ecosystem":"cran","requirements":"\u003e= 4.1.0","direct":true,"kind":"depends","optional":false},{"id":7757082827,"package_name":"deSolve","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":7757082828,"package_name":"graphics","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":7757082832,"package_name":"stats","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":7757082833,"package_name":"utils","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":7757082834,"package_name":"DDD","ecosystem":"cran","requirements":"\u003e= 5.0","direct":true,"kind":"imports","optional":false},{"id":7757082835,"package_name":"subplex","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":7757082836,"package_name":"Matrix","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":7757082837,"package_name":"tensor","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":7757082838,"package_name":"pracma","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":7757082839,"package_name":"testit","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":7757082840,"package_name":"foreach","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":7757082967,"package_name":"doParallel","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":7757082968,"package_name":"magrittr","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":7757082969,"package_name":"parallel","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":7757082972,"package_name":"Rcpp","ecosystem":"cran","requirements":"\u003e= 1.0.10","direct":true,"kind":"imports","optional":false},{"id":7757082985,"package_name":"covr","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":7757082992,"package_name":"testthat","ecosystem":"cran","requirements":"\u003e= 2.1.0","direct":true,"kind":"suggests","optional":false},{"id":7757082993,"package_name":"knitr","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":7757082994,"package_name":"rmarkdown","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":7757082995,"package_name":"gridExtra","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":7757082996,"package_name":"dplyr","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":7757082997,"package_name":"ggplot2","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":7757083055,"package_name":"ggtree","ecosystem":"cran","requirements":"\u003e= 3.0.0","direct":true,"kind":"suggests","optional":false},{"id":7757083057,"package_name":"tidytree","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":7757083082,"package_name":"tidyr","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":7757083112,"package_name":"purrr","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":7757083113,"package_name":"ape","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":7757083117,"package_name":"phytools","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":7757083118,"package_name":"tibble","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":7757083119,"package_name":"doMC","ecosystem":"cran","requirements":"*","direct":true,"kind":"enhances","optional":false}]},{"ecosystem":"actions","filepath":".github/workflows/pkgdown.yaml","sha":null,"kind":"manifest","created_at":"2024-05-13T16:51:31.198Z","updated_at":"2024-05-13T16:51:31.198Z","repository_link":"https://github.com/rsetienne/DAISIE/blob/master/.github/workflows/pkgdown.yaml","dependencies":[{"id":18063281365,"package_name":"actions/checkout","ecosystem":"actions","requirements":"v3","direct":true,"kind":"composite","optional":false},{"id":18063281366,"package_name":"r-lib/actions/setup-pandoc","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":18063281367,"package_name":"r-lib/actions/setup-r","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":18063281368,"package_name":"r-lib/actions/setup-r-dependencies","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":18063281369,"package_name":"JamesIves/github-pages-deploy-action","ecosystem":"actions","requirements":"v4.4.1","direct":true,"kind":"composite","optional":false}]}],"score":16.284442793489077,"created_at":"2025-09-08T11:18:41.643Z","updated_at":"2025-10-07T08:25:07.738Z","avatar_url":"https://github.com/rsetienne.png","language":"R","category":null,"sub_category":null,"monthly_downloads":308,"funding_links":[],"readme_doi_urls":["https://doi.org/10.5281/zenodo.4054058","http://doi.org/10.1098/rspb.2013.3227","http://doi.org/10.1111/ele.12461","http://doi.org/10.1038/s41559-016-0026","https://doi.org/10.1016/j.cub.2017.04.053","http://doi.org/10.1111/ecog.03503","https://doi.org/10.1016/j.cub.2019.06.058","https://doi.org/10.1038/s41586-020-2022-5","https://doi.org/10.1111/jbi.13914","https://doi.org/10.32942/osf.io/w5ntf","https://doi.org/10.1111/jbi.14519","https://doi.org/10.1101/2022.01.13.476210","https://doi.org/10.1093/evolut/qpad006","https://doi.org/10.1038/s41467-022-35215-3","https://doi.org/10.1016/j.ympev.2025.108324"],"works":{},"citation_counts":{},"total_citations":0,"keywords_from_contributors":["phylogenetics"],"project_url":"https://science.ecosyste.ms/api/v1/projects/66240","html_url":"https://science.ecosyste.ms/projects/66240"}