{"id":66318,"name":"preprocessCore","description":null,"url":"https://github.com/bmbolstad/preprocesscore","last_synced_at":"2025-09-08T13:37:45.941Z","repository":{"id":20250755,"uuid":"23523419","full_name":"bmbolstad/preprocessCore","owner":"bmbolstad","description":null,"archived":false,"fork":false,"pushed_at":"2025-06-20T14:11:31.000Z","size":505,"stargazers_count":19,"open_issues_count":1,"forks_count":16,"subscribers_count":1,"default_branch":"devel","last_synced_at":"2025-08-29T01:43:04.338Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":null,"language":"C","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":null,"status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/bmbolstad.png","metadata":{"files":{"readme":null,"changelog":"CHANGELOG","contributing":null,"funding":null,"license":null,"code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null}},"created_at":"2014-08-31T21:20:30.000Z","updated_at":"2025-06-20T14:11:35.000Z","dependencies_parsed_at":"2024-12-15T00:17:31.947Z","dependency_job_id":"f01dcbd9-f297-46ee-b5a4-4943a245c20b","html_url":"https://github.com/bmbolstad/preprocessCore","commit_stats":{"total_commits":357,"total_committers":26,"mean_commits":13.73076923076923,"dds":0.7591036414565826,"last_synced_commit":"33ccbd9451bb8c6e314b6a72ca6a8a63e14dafde"},"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"purl":"pkg:github/bmbolstad/preprocessCore","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/bmbolstad%2FpreprocessCore","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/bmbolstad%2FpreprocessCore/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/bmbolstad%2FpreprocessCore/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/bmbolstad%2FpreprocessCore/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/bmbolstad","download_url":"https://codeload.github.com/bmbolstad/preprocessCore/tar.gz/refs/heads/devel","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/bmbolstad%2FpreprocessCore/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":274194946,"owners_count":25239146,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-09-08T02:00:09.813Z","response_time":121,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"owner":{"login":"bmbolstad","name":"Ben Bolstad","uuid":"5719304","kind":"user","description":"","email":"","website":"http://bmbolstad.com","location":null,"twitter":null,"company":null,"icon_url":"https://avatars.githubusercontent.com/u/5719304?v=4","repositories_count":6,"last_synced_at":"2023-08-04T23:01:27.524Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/bmbolstad","funding_links":[],"total_stars":null,"followers":null,"following":null,"created_at":"2022-11-06T08:24:33.328Z","updated_at":"2023-08-04T23:01:27.563Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/bmbolstad","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/bmbolstad/repositories"},"packages":[{"id":8420344,"name":"preprocessCore","ecosystem":"bioconductor","description":"A collection of pre-processing functions","homepage":"https://github.com/bmbolstad/preprocessCore ","licenses":"LGPL (\u003e= 2)","normalized_licenses":["libpng-2.0"],"repository_url":"https://github.com/bmbolstad/preprocessCore","keywords_array":["Infrastructure","Software"],"namespace":null,"versions_count":5,"first_release_published_at":"2023-10-12T14:52:40.891Z","latest_release_published_at":"2025-04-22T23:19:46.220Z","latest_release_number":"1.70.0","last_synced_at":"2025-08-28T21:20:29.292Z","created_at":"2023-10-12T14:52:40.664Z","updated_at":"2025-08-28T21:36:11.189Z","registry_url":"https://bioconductor.org/packages/preprocessCore","install_command":null,"documentation_url":"https://bioconductor.org/packages/release/bioc/vignettes/preprocessCore/inst/doc/preprocessCore.pdf","metadata":{},"repo_metadata":{"id":20250755,"uuid":"23523419","full_name":"bmbolstad/preprocessCore","owner":"bmbolstad","description":null,"archived":false,"fork":false,"pushed_at":"2025-06-20T14:11:31.000Z","size":505,"stargazers_count":19,"open_issues_count":1,"forks_count":16,"subscribers_count":1,"default_branch":"devel","last_synced_at":"2025-07-25T06:37:54.896Z","etag":null,"topics":[],"latest_commit_sha":null,"homepage":null,"language":"C","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":null,"status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/bmbolstad.png","metadata":{"files":{"readme":null,"changelog":"CHANGELOG","contributing":null,"funding":null,"license":null,"code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null}},"created_at":"2014-08-31T21:20:30.000Z","updated_at":"2025-06-20T14:11:35.000Z","dependencies_parsed_at":"2024-12-15T00:17:31.947Z","dependency_job_id":"f01dcbd9-f297-46ee-b5a4-4943a245c20b","html_url":"https://github.com/bmbolstad/preprocessCore","commit_stats":{"total_commits":357,"total_committers":26,"mean_commits":13.73076923076923,"dds":0.7591036414565826,"last_synced_commit":"33ccbd9451bb8c6e314b6a72ca6a8a63e14dafde"},"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"purl":"pkg:github/bmbolstad/preprocessCore","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/bmbolstad%2FpreprocessCore","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/bmbolstad%2FpreprocessCore/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/bmbolstad%2FpreprocessCore/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/bmbolstad%2FpreprocessCore/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/bmbolstad","download_url":"https://codeload.github.com/bmbolstad/preprocessCore/tar.gz/refs/heads/devel","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/bmbolstad%2FpreprocessCore/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":272559550,"owners_count":24955369,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-08-28T02:00:10.768Z","response_time":74,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"},"owner_record":{"login":"bmbolstad","name":"Ben Bolstad","uuid":"5719304","kind":"user","description":"","email":"","website":"http://bmbolstad.com","location":null,"twitter":null,"company":null,"icon_url":"https://avatars.githubusercontent.com/u/5719304?v=4","repositories_count":6,"last_synced_at":"2023-08-04T23:01:27.524Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/bmbolstad","funding_links":[],"total_stars":null,"followers":null,"following":null,"created_at":"2022-11-06T08:24:33.328Z","updated_at":"2023-08-04T23:01:27.563Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/bmbolstad","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/bmbolstad/repositories"},"tags":[]},"repo_metadata_updated_at":"2025-08-28T21:36:11.189Z","dependent_packages_count":51,"downloads":2496880,"downloads_period":"total","dependent_repos_count":0,"rankings":{"downloads":1.3049151805132666,"dependent_repos_count":0.0,"dependent_packages_count":1.6528925619834711,"stargazers_count":11.700739451935624,"forks_count":4.69769464984776,"docker_downloads_count":null,"average":3.871248368856024},"purl":"pkg:bioconductor/preprocessCore","advisories":[],"docker_usage_url":"https://docker.ecosyste.ms/usage/bioconductor/preprocessCore","docker_dependents_count":null,"docker_downloads_count":null,"usage_url":"https://repos.ecosyste.ms/usage/bioconductor/preprocessCore","dependent_repositories_url":"https://repos.ecosyste.ms/api/v1/usage/bioconductor/preprocessCore/dependencies","status":null,"funding_links":[],"critical":false,"issue_metadata":{"last_synced_at":"2025-07-25T02:51:19.189Z","issues_count":16,"pull_requests_count":5,"avg_time_to_close_issue":9716304.875,"avg_time_to_close_pull_request":3241345.6,"issues_closed_count":8,"pull_requests_closed_count":5,"pull_request_authors_count":5,"issue_authors_count":14,"avg_comments_per_issue":3.8125,"avg_comments_per_pull_request":1.0,"merged_pull_requests_count":4,"bot_issues_count":0,"bot_pull_requests_count":0,"past_year_issues_count":1,"past_year_pull_requests_count":0,"past_year_avg_time_to_close_issue":null,"past_year_avg_time_to_close_pull_request":null,"past_year_issues_closed_count":0,"past_year_pull_requests_closed_count":0,"past_year_pull_request_authors_count":0,"past_year_issue_authors_count":1,"past_year_avg_comments_per_issue":0.0,"past_year_avg_comments_per_pull_request":null,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":0,"issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/bmbolstad%2FpreprocessCore/issues","maintainers":[{"login":"bmbolstad","count":1,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/bmbolstad"}],"active_maintainers":[]},"versions_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/packages/preprocessCore/versions","version_numbers_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/packages/preprocessCore/version_numbers","dependent_packages_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/packages/preprocessCore/dependent_packages","related_packages_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/packages/preprocessCore/related_packages","maintainers":[{"uuid":"bmb@bmbolstad.com","login":null,"name":"Ben Bolstad","email":"bmb@bmbolstad.com","url":null,"packages_count":5,"html_url":null,"role":null,"created_at":"2023-10-30T14:10:46.194Z","updated_at":"2023-10-30T14:10:46.194Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/maintainers/bmb@bmbolstad.com/packages"}],"registry":{"name":"bioconductor.org","url":"https://bioconductor.org","ecosystem":"bioconductor","default":true,"packages_count":2505,"maintainers_count":3164,"namespaces_count":0,"keywords_count":1086,"github":"Bioconductor","metadata":{"funded_packages_count":3},"icon_url":"https://github.com/Bioconductor.png","created_at":"2023-10-12T14:09:56.428Z","updated_at":"2025-09-08T06:51:28.460Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/packages","maintainers_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/maintainers","namespaces_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/namespaces"}}],"commits":{"id":1403079,"full_name":"bmbolstad/preprocessCore","default_branch":"master","committers":[{"name":"Ben Bolstad","email":"bolstad@stat.berkeley.edu","login":null,"count":86},{"name":"bolstad","email":"bolstad@bc3139a8-67e5-0310-9ffc-ced21a209358","login":null,"count":86},{"name":"Ben Bolstad","email":"bmb@bmbolstad.com","login":null,"count":52},{"name":"Dan Tenenbaum","email":"dtenenba@fhcrc.org","login":null,"count":23},{"name":"d.tenenbaum","email":"d.tenenbaum@bc3139a8-67e5-0310-9ffc-ced21a209358","login":null,"count":23},{"name":"Nitesh Turaga","email":"nitesh.turaga@gmail.com","login":null,"count":14},{"name":"Patrick Aboyoun","email":"unknown","login":null,"count":12},{"name":"p.aboyoun","email":"p.aboyoun@bc3139a8-67e5-0310-9ffc-ced21a209358","login":null,"count":12},{"name":"Herve Pages","email":"hpages@fhcrc.org","login":null,"count":10},{"name":"hpages@fhcrc.org","email":"hpages@fhcrc.org@bc3139a8-67e5-0310-9ffc-ced21a209358","login":null,"count":10},{"name":"Bioconductor Git-SVN Bridge","email":"bioc-sync@bioconductor.org","login":null,"count":3},{"name":"wkumler","email":"wkumler@uw.edu","login":null,"count":3},{"name":"Benilton Carvalho","email":"bcarvalh@jhsph.edu","login":null,"count":2},{"name":"Francisco D. Morón-Duran","email":"fmoron@igtp.cat","login":null,"count":2},{"name":"Hervé Pagès","email":"hpages@fredhutch.org","login":null,"count":2},{"name":"J Wokaty","email":"jennifer.wokaty@sph.cuny.edu","login":null,"count":2},{"name":"Robert Gentleman","email":"rgentlem@fhcrc.org","login":null,"count":2},{"name":"bcarvalh@jhsph.edu","email":"bcarvalh@jhsph.edu@bc3139a8-67e5-0310-9ffc-ced21a209358","login":null,"count":2},{"name":"rgentlem","email":"rgentlem@bc3139a8-67e5-0310-9ffc-ced21a209358","login":null,"count":2},{"name":"vobencha","email":"valerie.obenchain@roswellpark.org","login":null,"count":2},{"name":"vobencha","email":"vobencha@gmail.com","login":null,"count":2},{"name":"Christophe Vanderaa","email":"vanderaa.christophe@gmail.com","login":null,"count":1},{"name":"Martin Morgan","email":"mtmorgan@fhcrc.org","login":null,"count":1},{"name":"R building","email":"rbuild@localhost.localdomain","login":null,"count":1},{"name":"Tom Callaway","email":"spot@fedoraproject.org","login":null,"count":1},{"name":"mtmorgan@fhcrc.org","email":"mtmorgan@fhcrc.org@bc3139a8-67e5-0310-9ffc-ced21a209358","login":null,"count":1}],"total_commits":357,"total_committers":26,"total_bot_commits":0,"total_bot_committers":0,"mean_commits":13.73076923076923,"dds":0.7591036414565826,"past_year_committers":[],"past_year_total_commits":0,"past_year_total_committers":0,"past_year_total_bot_commits":0,"past_year_total_bot_committers":0,"past_year_mean_commits":0.0,"past_year_dds":0.0,"last_synced_at":"2024-06-04T08:03:46.983Z","last_synced_commit":"33ccbd9451bb8c6e314b6a72ca6a8a63e14dafde","created_at":"2023-10-25T13:05:05.246Z","updated_at":"2024-06-04T08:03:46.984Z","commits_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories/bmbolstad%2FpreprocessCore/commits","host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-08T00:00:16.827Z","repositories_count":5480019,"commits_count":853389126,"contributors_count":31098155,"owners_count":906558,"icon_url":"https://github.com/github.png","host_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories"}},"issues_stats":{"full_name":"bmbolstad/preprocessCore","html_url":"https://github.com/bmbolstad/preprocessCore","last_synced_at":"2025-08-28T21:40:42.683Z","status":"error","issues_count":16,"pull_requests_count":5,"avg_time_to_close_issue":9716304.875,"avg_time_to_close_pull_request":3241345.6,"issues_closed_count":8,"pull_requests_closed_count":5,"pull_request_authors_count":5,"issue_authors_count":14,"avg_comments_per_issue":3.8125,"avg_comments_per_pull_request":1.0,"merged_pull_requests_count":4,"bot_issues_count":0,"bot_pull_requests_count":0,"past_year_issues_count":1,"past_year_pull_requests_count":0,"past_year_avg_time_to_close_issue":null,"past_year_avg_time_to_close_pull_request":null,"past_year_issues_closed_count":0,"past_year_pull_requests_closed_count":0,"past_year_pull_request_authors_count":0,"past_year_issue_authors_count":1,"past_year_avg_comments_per_issue":0.0,"past_year_avg_comments_per_pull_request":null,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":0,"created_at":"2024-04-09T12:33:47.892Z","updated_at":"2025-08-29T19:13:56.637Z","repository_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/bmbolstad%2FpreprocessCore","issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/bmbolstad%2FpreprocessCore/issues","issue_labels_count":{"enhancement":1},"pull_request_labels_count":{"enhancement":1},"issue_author_associations_count":{"NONE":15,"OWNER":1},"pull_request_author_associations_count":{"CONTRIBUTOR":3,"NONE":2},"issue_authors":{"bbimber":2,"guidohooiveld":2,"lappazos":1,"shenweiyan":1,"bmbolstad":1,"kanchanhole":1,"mv911119":1,"Maarten-vd-Sande":1,"mfeldbauer":1,"millerh1":1,"RaInSLc":1,"peachone":1,"huosan0123":1,"Hocnonsense":1},"pull_request_authors":{"wkumler":1,"spotrh":1,"franciscodavid":1,"cvanderaa":1,"lgatto":1},"host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2025-09-01T00:00:07.725Z","repositories_count":9941623,"issues_count":29439835,"pull_requests_count":85196649,"authors_count":9319124,"icon_url":"https://github.com/github.png","host_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories","owners_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/owners","authors_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors"},"past_year_issue_labels_count":{},"past_year_pull_request_labels_count":{},"past_year_issue_author_associations_count":{"NONE":1},"past_year_pull_request_author_associations_count":{},"past_year_issue_authors":{"RaInSLc":1},"past_year_pull_request_authors":{},"maintainers":[{"login":"bmbolstad","count":1,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/bmbolstad"}],"active_maintainers":[]},"events":{"total":{"IssuesEvent":2,"WatchEvent":3,"IssueCommentEvent":6,"PushEvent":7,"ForkEvent":2,"CreateEvent":1},"last_year":{"IssuesEvent":2,"WatchEvent":3,"IssueCommentEvent":6,"PushEvent":7,"ForkEvent":2,"CreateEvent":1}},"keywords":[],"dependencies":[{"ecosystem":"cran","filepath":"DESCRIPTION","sha":null,"kind":"manifest","created_at":"2022-06-26T03:49:41.814Z","updated_at":"2022-06-26T03:49:41.814Z","repository_link":"https://github.com/bmbolstad/preprocessCore/blob/devel/DESCRIPTION","dependencies":[{"id":62118264,"package_name":"stats","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false}]}],"score":20.984402147787353,"created_at":"2025-09-08T11:18:41.997Z","updated_at":"2025-10-07T08:25:08.814Z","avatar_url":"https://github.com/bmbolstad.png","language":"C","category":null,"sub_category":null,"monthly_downloads":0,"funding_links":[],"readme_doi_urls":[],"works":{},"citation_counts":{},"total_citations":0,"keywords_from_contributors":["bioconductor-package","genomics","bioconductor","mass-spectrometry","gene","peak-detection","metabolomics","feature-detection","hdf5","rhdf5"],"project_url":"https://science.ecosyste.ms/api/v1/projects/66318","html_url":"https://science.ecosyste.ms/projects/66318"}